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Overview

ID MAG02863
Name PJD1_bin.29
Sample SMP0067
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family SG8-39
Genus RBG-16-66-20
Species
Assembly information
Completeness (%) 63.87
Contamination (%) 2.09
GC content (%) 68.0
N50 (bp) 4,014
Genome size (bp) 1,730,224

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2045

Gene name Description KEGG GOs EC E-value Score Sequence
PJD1_k127_1014692_0 Histidine Phosphotransfer domain K10715 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 358.0
PJD1_k127_1017898_0 multicopper oxidase type 3 K22348 - 1.16.3.3 2.055e-237 744.0
PJD1_k127_1017898_1 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 337.0
PJD1_k127_1017898_2 Copper binding proteins, plastocyanin/azurin family - - - 0.000000000000000000000000000000000000000000000000000000001509 205.0
PJD1_k127_1017898_3 Copper binding periplasmic protein CusF - - - 0.000000000000000000000002566 107.0
PJD1_k127_1017898_4 Outer membrane efflux protein - - - 0.000000000000004068 77.0
PJD1_k127_1032339_0 FAD binding domain K11472 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 335.0
PJD1_k127_1032339_1 Glycolate oxidase, iron-sulfur subunit K11473 - - 0.0000000000000000000000000000000000000000000000000000000003023 203.0
PJD1_k127_1040179_0 elongation factor G K02355 - - 8.111e-256 800.0
PJD1_k127_1040179_1 Alpha beta hydrolase - - - 0.0001422 45.0
PJD1_k127_1041054_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009482 454.0
PJD1_k127_1041054_1 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000002059 135.0
PJD1_k127_1041054_2 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000266 79.0
PJD1_k127_1041054_3 - - - - 0.000000001212 59.0
PJD1_k127_1041054_4 - - - - 0.0000002493 52.0
PJD1_k127_1058653_0 Belongs to the amidase family K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 581.0
PJD1_k127_1058653_1 Domain of unknown function (DUF4070) - - - 0.000000000000000000000000000000000000000000000000000000000000113 216.0
PJD1_k127_1058653_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000003665 87.0
PJD1_k127_1058653_3 COG NOG19114 non supervised orthologous group - - - 0.000007264 52.0
PJD1_k127_10643_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 386.0
PJD1_k127_10643_1 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007073 362.0
PJD1_k127_10643_2 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 339.0
PJD1_k127_10643_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.000000000000000000000000000000000000000000000000005355 183.0
PJD1_k127_10643_4 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000006521 179.0
PJD1_k127_10643_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000001148 168.0
PJD1_k127_10643_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000000003061 141.0
PJD1_k127_10643_7 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000006187 100.0
PJD1_k127_10643_8 ATP synthase I chain K02116 - - 0.0000000000000000007544 97.0
PJD1_k127_1074736_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003159 284.0
PJD1_k127_1074736_1 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006137 284.0
PJD1_k127_1074736_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000003869 78.0
PJD1_k127_1074736_3 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000002131 60.0
PJD1_k127_1075726_0 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 408.0
PJD1_k127_1075726_1 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008786 273.0
PJD1_k127_1075726_2 PFAM multi antimicrobial extrusion protein MatE - - - 0.000000000000000000000000000000000000000000000000000009785 196.0
PJD1_k127_1087548_0 PFAM AAA ATPase central domain protein K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004708 417.0
PJD1_k127_1087548_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.00000000000000000000000035 105.0
PJD1_k127_1087548_2 PFAM Protein kinase domain - - - 0.0000000000000000003298 99.0
PJD1_k127_1123207_0 RNB K01147 - 3.1.13.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007377 594.0
PJD1_k127_1123207_1 Uncharacterised protein family (UPF0227) K07000 - - 0.0000000000000000000000000001575 117.0
PJD1_k127_1123261_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006137 502.0
PJD1_k127_1123261_1 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000886 327.0
PJD1_k127_1123261_2 Benzoate membrane transport protein K05782 - - 0.0000000000000000000000000000000000000000000000000000000000004357 216.0
PJD1_k127_1123261_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000194 121.0
PJD1_k127_1123261_4 - - - - 0.00000002801 60.0
PJD1_k127_1123694_0 poly(R)-hydroxyalkanoic acid synthase K03821 - - 4.474e-254 803.0
PJD1_k127_1123694_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000001104 201.0
PJD1_k127_1146931_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1150.0
PJD1_k127_1146931_1 Metallopeptidase family M24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009304 421.0
PJD1_k127_1146931_2 Peptidyl-prolyl cis-trans K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000001139 189.0
PJD1_k127_1146931_3 Protein of unknown function (DUF1643) - - - 0.00000000000000000000000000000000000000001265 156.0
PJD1_k127_1146931_4 COGs COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain) - - - 0.00000000000000000000000000002812 124.0
PJD1_k127_116622_0 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003416 282.0
PJD1_k127_116622_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000003647 246.0
PJD1_k127_116622_2 Protein of unknown function (DUF465) - - - 0.000000000167 64.0
PJD1_k127_1205456_0 Oxidoreductase family, NAD-binding Rossmann fold K10219 - 1.1.1.312 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 535.0
PJD1_k127_1205456_1 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04099,K04101 - 1.13.11.57,1.13.11.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 517.0
PJD1_k127_1205456_2 PFAM Amidohydrolase 2 K10221 - 3.1.1.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006643 487.0
PJD1_k127_1205456_3 Dehydrogenase K03520 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 282.0
PJD1_k127_1205456_4 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04100 - 1.13.11.8 0.00000000000000000000000000000000000000000000000000000000000000000000208 236.0
PJD1_k127_1205456_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000002033 186.0
PJD1_k127_1205456_6 Hemerythrin HHE cation binding domain K07216 - - 0.000000000000000001469 90.0
PJD1_k127_1211314_0 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 366.0
PJD1_k127_1211314_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006593 248.0
PJD1_k127_12360_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1010.0
PJD1_k127_126468_0 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 597.0
PJD1_k127_126468_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000002647 161.0
PJD1_k127_126468_2 Transport and Golgi organisation 2 - - - 0.000000000000000000000000003473 117.0
PJD1_k127_126471_0 DeoC/LacD family aldolase K08321,K11645 GO:0003674,GO:0003824,GO:0016740,GO:0016746,GO:0016747 2.3.1.245,4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008563 467.0
PJD1_k127_126471_1 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000000000000000000000000001003 198.0
PJD1_k127_126471_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000005382 160.0
PJD1_k127_126471_3 Protein conserved in bacteria K09780 - - 0.000000000000002342 79.0
PJD1_k127_1272585_0 Mo-co oxidoreductase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001108 285.0
PJD1_k127_1272585_1 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.000000000000000000000000000000000000000000000000384 181.0
PJD1_k127_1272585_2 Aminotransferase K14155 - 4.4.1.8 0.0000002247 53.0
PJD1_k127_1297_0 Aspartate ammonia-lyase K01744 - 4.3.1.1 2.602e-217 683.0
PJD1_k127_1297_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895,K01907 - 6.2.1.1,6.2.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 580.0
PJD1_k127_1297_2 PFAM Extracellular solute-binding protein, family 3 K10001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 356.0
PJD1_k127_1297_3 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 328.0
PJD1_k127_1297_4 Binding-protein-dependent transport system inner membrane component K10003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006676 303.0
PJD1_k127_1297_5 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000005111 258.0
PJD1_k127_1297_6 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K10002 - - 0.00000000000000005312 83.0
PJD1_k127_1297_7 Bacterial PH domain - - - 0.00000000621 56.0
PJD1_k127_131632_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000003887 234.0
PJD1_k127_131632_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000673 233.0
PJD1_k127_131632_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000478 166.0
PJD1_k127_131632_3 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000006242 147.0
PJD1_k127_1340870_0 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005852 308.0
PJD1_k127_1340870_1 Polynucleotide kinase 3 phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000004737 267.0
PJD1_k127_1340870_2 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000005657 240.0
PJD1_k127_1340870_3 Protein of unknown function DUF45 K07043 - - 0.000000000000000000000000000000000000000000000004572 191.0
PJD1_k127_136370_0 Heat shock 70 kDa protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 481.0
PJD1_k127_136370_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000838 319.0
PJD1_k127_1402973_0 Proton-conducting membrane transporter K12141 - - 1.274e-235 736.0
PJD1_k127_1402973_1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.0002775 53.0
PJD1_k127_1551819_0 Malic enzyme K00029 - 1.1.1.40 8.799e-217 683.0
PJD1_k127_1551819_1 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 424.0
PJD1_k127_1551819_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009119 423.0
PJD1_k127_1551819_3 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009103 325.0
PJD1_k127_1551819_4 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000000000009303 216.0
PJD1_k127_1551819_5 Putative prokaryotic signal transducing protein - - - 0.00000000000000000001267 93.0
PJD1_k127_1551819_6 - - - - 0.000000000000000001665 89.0
PJD1_k127_1584759_0 Orn/Lys/Arg decarboxylase, C-terminal domain K01583 - 4.1.1.19 1.878e-294 909.0
PJD1_k127_1584759_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000004508 147.0
PJD1_k127_1584759_2 Protein of unknown function (DUF3579) - - - 0.00000000000000000000000000001646 121.0
PJD1_k127_1584759_3 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000001348 94.0
PJD1_k127_158609_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.0 1531.0
PJD1_k127_158609_1 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000008592 186.0
PJD1_k127_1587445_0 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 559.0
PJD1_k127_1589080_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 0.0 1197.0
PJD1_k127_1589080_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005505 546.0
PJD1_k127_1589080_2 ATPase histidine kinase DNA gyrase B HSP90 domain protein K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006146 395.0
PJD1_k127_1589080_3 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000001197 235.0
PJD1_k127_1589553_0 Allophanate hydrolase subunit 1 - - - 0.00000000000000000000000000000000000000000000000000002298 196.0
PJD1_k127_1589553_1 Nitrile hydratase K01721,K20807 - 4.2.1.84 0.0000000000000000000000000000000000000000000000000222 180.0
PJD1_k127_1589553_2 Allophanate hydrolase subunit 2 K06350 - - 0.00000000000000000000000000000000000000000000001462 175.0
PJD1_k127_1592851_0 dna topoisomerase III K03169 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005324 555.0
PJD1_k127_1592851_1 DNA recombination-mediator protein A K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007668 351.0
PJD1_k127_1592851_2 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000006986 130.0
PJD1_k127_1602368_0 Dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 568.0
PJD1_k127_1602368_1 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000486 506.0
PJD1_k127_1602368_10 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000004241 93.0
PJD1_k127_1602368_11 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.0000000007944 60.0
PJD1_k127_1602368_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007731 498.0
PJD1_k127_1602368_3 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009393 491.0
PJD1_k127_1602368_4 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 374.0
PJD1_k127_1602368_5 symbiont process K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004773 351.0
PJD1_k127_1602368_6 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 324.0
PJD1_k127_1602368_7 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001167 252.0
PJD1_k127_1602368_8 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000001478 226.0
PJD1_k127_1602368_9 Belongs to the UPF0250 family K09158 - - 0.00000000000000000000008478 102.0
PJD1_k127_1613679_0 Glutamate-cysteine ligase K01919 - 6.3.2.2 1.861e-194 614.0
PJD1_k127_1613679_1 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 398.0
PJD1_k127_1613679_2 PFAM PTS system fructose subfamily IIA component K02821 - 2.7.1.194 0.0000000000000000000000000000000000000000000000264 173.0
PJD1_k127_1613679_3 COG3245 Cytochrome c5 - - - 0.000000000000000000000000000000001705 134.0
PJD1_k127_1646459_0 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 1.232e-285 881.0
PJD1_k127_1646459_1 Transcriptional regulator, LysR family K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 319.0
PJD1_k127_1646459_2 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002002 239.0
PJD1_k127_1646459_3 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.00000000000000000000000000000000000000001581 156.0
PJD1_k127_1646459_4 Nudix hydrolase K03426 - 3.6.1.22 0.000000000000000000000000001452 119.0
PJD1_k127_164789_0 Radical SAM K06871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 377.0
PJD1_k127_164789_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000001728 147.0
PJD1_k127_164789_2 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000002938 138.0
PJD1_k127_1649063_0 PFAM Carbamoyl-phosphate synthase L chain, ATP binding domain, Biotin carboxylase C-terminal domain, Carbamoyl-phosphate synthase L chain, N-terminal domain K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 3.334e-242 753.0
PJD1_k127_1649063_1 Mur ligase family, catalytic domain K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 604.0
PJD1_k127_1649063_2 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000001242 199.0
PJD1_k127_1649063_3 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000004306 191.0
PJD1_k127_1649063_4 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000004823 187.0
PJD1_k127_1649063_5 - - - - 0.0000000000000000000000000000000000000000000323 175.0
PJD1_k127_1649063_6 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000004197 141.0
PJD1_k127_1649063_7 Uncharacterised protein family (UPF0227) K07000 - - 0.0000000000000000000000000000006335 134.0
PJD1_k127_1665276_0 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009741 474.0
PJD1_k127_1665276_1 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 413.0
PJD1_k127_1665276_2 Pfam Amidohydrolase K10220,K14333 - 4.1.1.46,4.2.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008827 336.0
PJD1_k127_1665276_3 KR domain K07535 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 322.0
PJD1_k127_1665276_4 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000251 289.0
PJD1_k127_1665276_5 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000004459 186.0
PJD1_k127_1665276_6 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.0000000000000000000000000000000002997 133.0
PJD1_k127_1665276_7 TIGRFAM addiction module antidote protein, HigA family K21498 - - 0.0000000000000000000000000000000004858 134.0
PJD1_k127_166704_0 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 487.0
PJD1_k127_1671135_0 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 302.0
PJD1_k127_1671135_1 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000000000000001738 197.0
PJD1_k127_1671135_2 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000008112 192.0
PJD1_k127_1671135_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000003406 113.0
PJD1_k127_1671135_4 Heavy-metal-associated domain K07213 - - 0.000000000003384 70.0
PJD1_k127_1671135_5 Outer membrane efflux protein - - - 0.00008955 49.0
PJD1_k127_1682832_0 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 353.0
PJD1_k127_1682832_1 Formate/nitrite transporter K06212 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 334.0
PJD1_k127_1682832_2 Domain of unknown function (DUF202) K00389 - - 0.000000000000000000000000000000009319 131.0
PJD1_k127_1689069_0 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005969 513.0
PJD1_k127_1689069_1 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000000000000000000000000003428 182.0
PJD1_k127_1689653_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 591.0
PJD1_k127_1689653_1 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009306 470.0
PJD1_k127_1689653_2 mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 342.0
PJD1_k127_1689653_3 Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007473 293.0
PJD1_k127_1689653_4 Pfam Sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000000002997 247.0
PJD1_k127_1712700_0 Cobalamin synthesis protein cobW C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003208 243.0
PJD1_k127_1712700_1 Amidohydrolase family K01464,K01465,K01466 - 3.5.2.2,3.5.2.3,3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000003705 230.0
PJD1_k127_1712700_2 LysR family transcriptional regulator - - - 0.0000001772 54.0
PJD1_k127_1713301_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 4.277e-212 672.0
PJD1_k127_1713301_1 Phosphotransferase System K11189 - - 0.000000000000000000000000000000008858 128.0
PJD1_k127_1713301_2 Phosphotransferase system, mannose fructose-specific component IIA K02821 - 2.7.1.194 0.000000000002701 67.0
PJD1_k127_1715114_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 465.0
PJD1_k127_1715114_1 Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 302.0
PJD1_k127_1715114_2 Chorismate mutase type II K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 0.0000000000000000000000008317 104.0
PJD1_k127_1715114_3 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000005793 100.0
PJD1_k127_1715724_0 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 359.0
PJD1_k127_1715724_1 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002864 294.0
PJD1_k127_1715724_2 - - - - 0.00000000005404 69.0
PJD1_k127_1734198_0 signal peptide protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 335.0
PJD1_k127_1734198_1 Kef-type K transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 314.0
PJD1_k127_1734198_2 - - - - 0.000000000000000000000000000000000000000000002993 169.0
PJD1_k127_1767201_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 6.415e-211 669.0
PJD1_k127_1767201_1 serine acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 316.0
PJD1_k127_1767201_2 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.00000000000000000000000000000000000000000000000000000000000000000005462 233.0
PJD1_k127_1767201_3 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly K13643 - - 0.0000000000000000000000000000000000000000000000000000000000001616 215.0
PJD1_k127_1767201_4 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000000000009451 183.0
PJD1_k127_1767201_5 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.0000000000000000000000000000000000000000000002408 173.0
PJD1_k127_1767201_6 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 0.000000000000002723 84.0
PJD1_k127_1796573_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 419.0
PJD1_k127_1796573_1 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 339.0
PJD1_k127_1796573_2 ApaG domain K06195 - - 0.00000000000000000000000000000000000000000000000000003578 192.0
PJD1_k127_1796573_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000004492 183.0
PJD1_k127_1796573_4 - - - - 0.0000000000000000000000000000000000000002574 166.0
PJD1_k127_1796573_5 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000003295 63.0
PJD1_k127_1832412_0 Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC) - - - 7.013e-195 619.0
PJD1_k127_1832412_1 cyclic nucleotide binding K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000001377 245.0
PJD1_k127_1832412_2 Domain of unknown function (DUF1993) K09983 - - 0.0000000000000000000000000000000000000000000000000000000000000000001825 233.0
PJD1_k127_1832412_3 Glycine-zipper domain - - - 0.0000000000000000000000000000000000000000000006088 173.0
PJD1_k127_1832412_4 SnoaL-like domain - - - 0.0000000000000000000000000002602 119.0
PJD1_k127_1832412_5 - - - - 0.00000000000000000005229 92.0
PJD1_k127_1832412_6 YXWGXW repeat (2 copies) - - - 0.0000000000000000001534 94.0
PJD1_k127_1839622_0 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 567.0
PJD1_k127_1839622_1 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009059 261.0
PJD1_k127_1839622_2 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.000000000000000000000000000000000000000000000000000000000000000214 223.0
PJD1_k127_1839622_3 lytic murein transglycosylase K08305 - - 0.0003582 54.0
PJD1_k127_1845801_0 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002807 237.0
PJD1_k127_1845801_1 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000006947 125.0
PJD1_k127_1845801_2 Protein of unknown function (DUF1178) - - - 0.000000000000000000000000000001294 124.0
PJD1_k127_1919639_0 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 396.0
PJD1_k127_1919639_1 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.000000000000000000000000000000000000000000000008692 182.0
PJD1_k127_1919639_2 Acyclic terpene utilisation family protein AtuA - - - 0.00000000000000000000000000000000000000000000004387 174.0
PJD1_k127_1919639_3 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381,K00392 - 1.8.1.2,1.8.7.1 0.000000000000000000000000000000000000000001135 158.0
PJD1_k127_1919639_4 - - - - 0.00000000000000000000000000000002158 129.0
PJD1_k127_1919639_5 protein conserved in bacteria - - - 0.00000000000000000000000000000008798 131.0
PJD1_k127_1919639_6 CbiX K03795 - 4.99.1.3 0.00003299 53.0
PJD1_k127_1935894_0 ABC transporter K06158 - - 1.603e-225 708.0
PJD1_k127_1935894_1 Pyruvate:ferredoxin oxidoreductase core domain II K18355 - 1.2.1.58 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 390.0
PJD1_k127_1935894_2 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001002 259.0
PJD1_k127_1956395_0 ABC-type Fe3 transport system, permease component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 574.0
PJD1_k127_1956395_1 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005746 330.0
PJD1_k127_1956395_2 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.0000000000000000000000000000001366 129.0
PJD1_k127_1962068_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 1.218e-227 720.0
PJD1_k127_1962068_1 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000003508 218.0
PJD1_k127_1962068_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000000000000000000000000003843 134.0
PJD1_k127_1967675_0 KaiC K08482 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009236 569.0
PJD1_k127_1967675_1 GAF domain - - - 0.000000000000201 70.0
PJD1_k127_2007141_0 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 343.0
PJD1_k127_2007141_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001202 275.0
PJD1_k127_2007141_2 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000003507 253.0
PJD1_k127_2007141_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000001645 129.0
PJD1_k127_2007141_4 Belongs to the UPF0434 family K09791 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000001055 76.0
PJD1_k127_2046509_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.922e-197 622.0
PJD1_k127_2046509_1 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005617 535.0
PJD1_k127_2046509_2 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 469.0
PJD1_k127_2046509_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000002254 251.0
PJD1_k127_2046509_4 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000005433 242.0
PJD1_k127_2046509_5 Transglycosylase associated protein - - - 0.0000003069 62.0
PJD1_k127_208220_0 tRNA pseudouridine synthase K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 435.0
PJD1_k127_208220_1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 338.0
PJD1_k127_208220_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 313.0
PJD1_k127_2110829_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000056 573.0
PJD1_k127_2110829_1 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 371.0
PJD1_k127_2110829_2 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 331.0
PJD1_k127_2110829_3 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000005691 241.0
PJD1_k127_2110829_4 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000007917 186.0
PJD1_k127_2126564_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01539 - 3.6.3.9 5.148e-227 720.0
PJD1_k127_2126564_1 luciferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004957 378.0
PJD1_k127_2126564_2 Protein of unknown function (DUF1223) - - - 0.000000000000000000000000000000000001338 145.0
PJD1_k127_21299_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 2.905e-211 670.0
PJD1_k127_21299_1 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 584.0
PJD1_k127_21299_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008025 428.0
PJD1_k127_21299_3 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 299.0
PJD1_k127_21299_4 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004766 295.0
PJD1_k127_21299_5 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000001125 188.0
PJD1_k127_21299_6 Rubrerythrin - - - 0.00000000000000000000000000000000000009597 149.0
PJD1_k127_21299_7 benzoyl-CoA reductase K04112 - 1.3.7.8 0.0000000000000000000000000000000002011 147.0
PJD1_k127_21299_8 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 0.000000000000000000000000000000004809 132.0
PJD1_k127_2139744_0 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 512.0
PJD1_k127_2139744_1 Fructose-1-6-bisphosphatase, N-terminal domain K01086 - 3.1.3.11,3.1.3.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009062 499.0
PJD1_k127_2139744_2 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004119 479.0
PJD1_k127_21428_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 569.0
PJD1_k127_21428_1 Sterol-sensing domain of SREBP cleavage-activation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 570.0
PJD1_k127_21428_2 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 494.0
PJD1_k127_21428_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 439.0
PJD1_k127_21428_4 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 424.0
PJD1_k127_21428_5 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000007143 175.0
PJD1_k127_21428_6 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000001626 137.0
PJD1_k127_21428_7 protein conserved in bacteria K09937 - - 0.000000000000000001522 86.0
PJD1_k127_2145280_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009135 509.0
PJD1_k127_2145280_1 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 312.0
PJD1_k127_2145280_2 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002458 266.0
PJD1_k127_2145280_3 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003333 279.0
PJD1_k127_2145280_4 TIGRFAM DnaA regulatory inactivator Hda K10763 - - 0.00000000000000000000000000000000000000000000000000000001121 204.0
PJD1_k127_2145280_5 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000001725 191.0
PJD1_k127_2183383_0 Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005893 501.0
PJD1_k127_2183383_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000002141 128.0
PJD1_k127_2183383_2 PFAM HD domain - - - 0.000000000001279 74.0
PJD1_k127_2245594_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 2.354e-209 656.0
PJD1_k127_2245594_1 Belongs to the GST superfamily K03599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 325.0
PJD1_k127_2245594_2 Cytochrome C1 family K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003007 292.0
PJD1_k127_2245594_3 stringent starvation protein b K03600 - - 0.00000000000000000000000000000000000002531 157.0
PJD1_k127_22902_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 1.458e-195 621.0
PJD1_k127_22902_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 584.0
PJD1_k127_22902_2 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 507.0
PJD1_k127_22902_3 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008981 483.0
PJD1_k127_22902_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 430.0
PJD1_k127_22902_5 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006432 419.0
PJD1_k127_22902_6 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412 323.0
PJD1_k127_22902_7 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.000000000000000000000000000000000000000001983 159.0
PJD1_k127_22902_8 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.000000389 53.0
PJD1_k127_2379844_0 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 458.0
PJD1_k127_2379844_1 haloacid dehalogenase K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 297.0
PJD1_k127_2379844_2 Adenosyltransferase K00798 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000003762 259.0
PJD1_k127_2379844_3 G T U mismatch-specific DNA glycosylase K03649 - 3.2.2.28 0.00000000000000000000000000000000000000000000000000000001811 203.0
PJD1_k127_2379844_4 oxidation-reduction process - - - 0.0000000000000000000000000000000000000000000001326 178.0
PJD1_k127_2379844_5 Protein of unknown function (DUF1304) K08987 - - 0.0000000000000000000000000000000000000000003329 169.0
PJD1_k127_2379844_6 ACT domain protein K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.00000000000000000000000000000000002195 139.0
PJD1_k127_2379844_7 Protein of unknown function (DUF541) - - - 0.0000000000000000000000000000000003294 148.0
PJD1_k127_2379844_8 Transcriptional regulator K07775 - - 0.0000000000000004927 84.0
PJD1_k127_2382134_0 Histidine kinase K07638 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 399.0
PJD1_k127_2382134_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009547 357.0
PJD1_k127_2382134_2 Bacterial regulatory helix-turn-helix protein, lysR family K03566 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 300.0
PJD1_k127_2382134_3 N-acetyltransferase - - - 0.000000000000000000000000000000000000001609 153.0
PJD1_k127_2385332_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005704 506.0
PJD1_k127_2385332_1 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000001355 222.0
PJD1_k127_2385332_2 CRS1_YhbY K07574 - - 0.00000000000000000000000008817 109.0
PJD1_k127_2385332_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000002439 96.0
PJD1_k127_23930_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 377.0
PJD1_k127_23930_1 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001871 271.0
PJD1_k127_2419461_0 Thioredoxin K05838 - - 0.0000000000000000000000000000000000000000000000000000000000001728 220.0
PJD1_k127_2419461_1 Phage derived protein Gp49-like (DUF891) - - - 0.000000000000000000000000000000000000000000000000001513 184.0
PJD1_k127_2419461_10 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000002511 70.0
PJD1_k127_2419461_2 3'-5' exonuclease - - - 0.000000000000000000000000000000000000000000000009092 181.0
PJD1_k127_2419461_3 COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) K05770 - - 0.00000000000000000000000000000000000000000003717 166.0
PJD1_k127_2419461_4 MazG-like family - - - 0.0000000000000000000000000000000000008703 150.0
PJD1_k127_2419461_5 Helix-turn-helix domain - - - 0.00000000000000000000000000000002829 128.0
PJD1_k127_2419461_6 Aminoacyl-tRNA editing domain K19055 - - 0.000000000000000000000000001421 115.0
PJD1_k127_2419461_7 mRNA binding - - - 0.00000000000000000000000002812 111.0
PJD1_k127_2419461_8 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000000000000001285 111.0
PJD1_k127_2420441_0 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 440.0
PJD1_k127_2420441_1 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002269 287.0
PJD1_k127_2420441_2 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000001486 211.0
PJD1_k127_2420441_3 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000003875 183.0
PJD1_k127_2427154_0 FAD linked oxidase domain protein K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009422 602.0
PJD1_k127_2427154_1 Zn-dependent protease with chaperone function K03799 - - 0.00000007287 60.0
PJD1_k127_2429304_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 7.652e-248 777.0
PJD1_k127_2429304_1 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007584 547.0
PJD1_k127_2429304_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 505.0
PJD1_k127_2429304_3 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 496.0
PJD1_k127_2429304_4 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000009637 251.0
PJD1_k127_2429304_5 dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases - - - 0.0000000000000000000000000000000000000000000000003695 187.0
PJD1_k127_2429304_6 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000006145 188.0
PJD1_k127_2429304_7 Methylmalonyl-CoA mutase K14447 - 5.4.99.63 0.0000000000000000000000000000000000001573 162.0
PJD1_k127_2429304_8 Universal stress protein - - - 0.000000000000000000505 87.0
PJD1_k127_243853_0 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006557 336.0
PJD1_k127_243853_1 Glutathione S-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 297.0
PJD1_k127_243853_2 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000005131 113.0
PJD1_k127_2446577_0 NADH flavin oxidoreductase NADH oxidase K09461 - 1.14.13.40 9.123e-302 940.0
PJD1_k127_2455454_0 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 542.0
PJD1_k127_2455454_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001046 258.0
PJD1_k127_2473101_0 Domain of unknown function (DUF4178) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 483.0
PJD1_k127_2473101_1 SPFH domain Band 7 family protein 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 442.0
PJD1_k127_2473148_0 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 9.546e-199 633.0
PJD1_k127_2473148_1 alginate biosynthesis protein AlgZ FimS K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 302.0
PJD1_k127_2480843_0 Protein of unknown function (DUF521) K09123 - - 4.582e-204 648.0
PJD1_k127_2480843_1 Methionine synthase K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 464.0
PJD1_k127_2480843_2 Protein of unknown function DUF126 K09128 - - 0.000000000000000000000000000000000000000000000000000000000006988 230.0
PJD1_k127_2480843_3 IclR family transcriptional regulator - - - 0.0000000000000000001741 92.0
PJD1_k127_2492209_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 304.0
PJD1_k127_2492209_1 acyl-CoA dehydrogenase K06445 - - 0.000000000000000000000000000000000000001696 152.0
PJD1_k127_2492209_2 - - - - 0.000000000000000004071 94.0
PJD1_k127_2497578_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 458.0
PJD1_k127_2497578_1 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000694 317.0
PJD1_k127_2497578_2 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000000000000001271 236.0
PJD1_k127_2497578_3 allophanate hydrolase subunit 2 K06350 - - 0.00000000000000000000000000000000000000000000009334 176.0
PJD1_k127_2499190_0 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 335.0
PJD1_k127_2499190_1 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 326.0
PJD1_k127_2499190_2 Cupin domain K00450 - 1.13.11.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 288.0
PJD1_k127_2499190_3 - - - - 0.0000000000000000001045 96.0
PJD1_k127_2499190_4 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0006157 42.0
PJD1_k127_250611_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 364.0
PJD1_k127_250611_1 helix_turn_helix, Lux Regulon K02479 - - 0.000000000000000000000000000000000000000000007074 172.0
PJD1_k127_2511683_0 HELICc2 K03722 - 3.6.4.12 2.037e-219 694.0
PJD1_k127_2511683_1 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 - - 4.317e-201 643.0
PJD1_k127_2511683_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 436.0
PJD1_k127_2511683_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 - 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 390.0
PJD1_k127_2511683_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007466 366.0
PJD1_k127_2511683_5 Nad-dependent epimerase dehydratase K22025 - 1.1.1.410 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 346.0
PJD1_k127_2511683_6 ZIP Zinc transporter K16267 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 333.0
PJD1_k127_2511683_7 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 318.0
PJD1_k127_2511683_8 synthesis repressor, PhaR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004062 243.0
PJD1_k127_2511683_9 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000249 229.0
PJD1_k127_251230_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K02021,K11085 - - 2.753e-208 660.0
PJD1_k127_251230_1 Glycosyl transferase 4-like - - - 0.00003864 50.0
PJD1_k127_2514609_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1240.0
PJD1_k127_2514609_1 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 338.0
PJD1_k127_2514609_2 type I secretion outer membrane protein, TolC K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 335.0
PJD1_k127_2514609_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005574 290.0
PJD1_k127_2514609_4 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000001202 257.0
PJD1_k127_2514609_5 Bacterial transcriptional repressor C-terminal K09017 - - 0.00000000000000000000000000000000000000000000000000000000000000000855 232.0
PJD1_k127_2520532_0 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 379.0
PJD1_k127_2520532_1 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001001 252.0
PJD1_k127_2520532_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.000000000000000000000000000000000000000000000000000000000005173 210.0
PJD1_k127_2520532_3 - - - - 0.00000000000006845 74.0
PJD1_k127_2520532_4 DsrE/DsrF-like family - - - 0.000314 48.0
PJD1_k127_2526075_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 8.343e-282 870.0
PJD1_k127_2529861_0 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 411.0
PJD1_k127_2529861_1 Methionine synthase K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 334.0
PJD1_k127_2529861_2 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation - - - 0.000000000000000000000000000000000000002052 151.0
PJD1_k127_2535226_0 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009204 455.0
PJD1_k127_2535226_1 - - - - 0.0000000000000000000003416 99.0
PJD1_k127_2535226_2 geranylgeranyl reductase - - - 0.000000000008434 78.0
PJD1_k127_2535893_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.78e-285 886.0
PJD1_k127_2535893_1 ribonuclease K01167 - 3.1.27.3 0.000000000000000000000000000000000001706 147.0
PJD1_k127_2535893_2 Protein of unknown function (DUF502) - - - 0.0000000000000000152 82.0
PJD1_k127_2540445_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 406.0
PJD1_k127_2540445_1 NADPH quinone oxidoreductase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 387.0
PJD1_k127_2540641_0 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 472.0
PJD1_k127_2540641_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000007899 186.0
PJD1_k127_2547465_0 Phosphoenolpyruvate phosphomutase K01841,K03417 - 4.1.3.30,5.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 382.0
PJD1_k127_2547465_1 PFAM amidohydrolase K01464,K01466 - 3.5.2.2,3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 327.0
PJD1_k127_2547465_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006286 323.0
PJD1_k127_2547465_3 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000008523 260.0
PJD1_k127_2547465_4 decarboxylase K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000000000000000000004215 214.0
PJD1_k127_2547465_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000005573 215.0
PJD1_k127_2547465_6 Pfam:Pyridox_oxidase K09979 - - 0.0000000000000000004209 101.0
PJD1_k127_2551130_0 glycolate oxidase subunit GlcD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006894 407.0
PJD1_k127_2551130_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009563 256.0
PJD1_k127_2551130_2 Mo-co oxidoreductase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000001932 212.0
PJD1_k127_2551130_3 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000101 211.0
PJD1_k127_2551130_4 cyclic nucleotide binding K01420 - - 0.0000000000000000000000000000000000000000000000000000000002809 228.0
PJD1_k127_2551130_5 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000108 178.0
PJD1_k127_2558812_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 5.329e-229 728.0
PJD1_k127_2558812_1 Methionine aminopeptidase K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 439.0
PJD1_k127_2558812_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 404.0
PJD1_k127_2558812_3 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 377.0
PJD1_k127_2558812_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008401 361.0
PJD1_k127_2558812_5 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007419 336.0
PJD1_k127_2558812_6 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001343 263.0
PJD1_k127_2558812_7 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000003889 139.0
PJD1_k127_2559559_0 Exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 491.0
PJD1_k127_2559559_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 429.0
PJD1_k127_2562008_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007699 589.0
PJD1_k127_2562008_1 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004959 532.0
PJD1_k127_2562008_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 333.0
PJD1_k127_2562008_3 DsrC like protein K11179 - - 0.0000000000000000000000000000000000000006941 150.0
PJD1_k127_2562008_4 Iron-sulphur cluster biosynthesis - - - 0.000008911 52.0
PJD1_k127_2574348_0 AMP-binding enzyme K12508 - 6.2.1.34 9.558e-214 681.0
PJD1_k127_2574348_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 616.0
PJD1_k127_2574348_2 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009504 439.0
PJD1_k127_2574348_3 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K20458 - 6.2.1.27,6.2.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001036 287.0
PJD1_k127_2574348_4 maleylacetoacetate isomerase K01800,K01801 - 5.2.1.2,5.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009875 279.0
PJD1_k127_2574348_5 Glucose inhibited division protein A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009881 269.0
PJD1_k127_2574348_6 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16165 - 3.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002471 290.0
PJD1_k127_2578468_0 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006235 372.0
PJD1_k127_2578468_1 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000002017 236.0
PJD1_k127_2578468_2 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000006532 221.0
PJD1_k127_2578468_3 Thioesterase superfamily K10806 - - 0.00000000000000000000000000000000000000000000000001235 183.0
PJD1_k127_2578468_4 MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000000000000000003504 175.0
PJD1_k127_25969_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006034 493.0
PJD1_k127_25969_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 357.0
PJD1_k127_25969_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000004916 234.0
PJD1_k127_2598578_0 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 517.0
PJD1_k127_2598578_1 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004312 243.0
PJD1_k127_2615530_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002298 282.0
PJD1_k127_2615530_1 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000001018 223.0
PJD1_k127_2615530_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.000000000000000000004822 102.0
PJD1_k127_2624779_0 L-lactate dehydrogenase K00101,K00104 - 1.1.2.3,1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895 544.0
PJD1_k127_2624779_1 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004604 291.0
PJD1_k127_2624779_2 Cation-efflux transporter that may have a role in detoxification - - - 0.000000000000000000000000000001001 124.0
PJD1_k127_2627360_0 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009926 313.0
PJD1_k127_2627360_1 membrane - - - 0.000000000002954 72.0
PJD1_k127_2632149_0 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007025 572.0
PJD1_k127_2632149_1 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 310.0
PJD1_k127_2632149_2 Transglycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001037 265.0
PJD1_k127_2632149_3 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000001424 100.0
PJD1_k127_2632149_4 COG0810 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.000000000000000000002608 94.0
PJD1_k127_2666958_0 Belongs to the DEAD box helicase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 443.0
PJD1_k127_2666958_1 Glutaredoxin - - - 0.0000000000000000000000000000000000000000000000002087 178.0
PJD1_k127_2666958_2 - - - - 0.0000000000000000000000000000000000000000598 156.0
PJD1_k127_2666958_3 PFAM HNH endonuclease - - - 0.00000000000000000000000000000000523 138.0
PJD1_k127_2666958_4 PIN domain - - - 0.0000000000000000000000251 105.0
PJD1_k127_2678956_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 1.543e-225 736.0
PJD1_k127_2678956_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 518.0
PJD1_k127_2678956_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 321.0
PJD1_k127_2678956_3 Belongs to the frataxin K06202 - - 0.0000000000000000000000001368 122.0
PJD1_k127_2681281_0 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002548 256.0
PJD1_k127_2681281_1 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000004226 231.0
PJD1_k127_2681281_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000000000003008 214.0
PJD1_k127_2681281_3 Belongs to the BolA IbaG family K05527,K22066 - - 0.00000000000000000001559 101.0
PJD1_k127_2681281_4 spectrin binding - - - 0.0000001273 63.0
PJD1_k127_2685227_0 Peptidase U32 K08303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 504.0
PJD1_k127_2685227_1 Peptidase family U32 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 317.0
PJD1_k127_2685227_2 Cyclic nucleotide-monophosphate binding domain K21563 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001036 284.0
PJD1_k127_2685227_3 Universal stress protein - - - 0.0005787 45.0
PJD1_k127_2710_0 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000001522 235.0
PJD1_k127_2710_1 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000001431 221.0
PJD1_k127_2784294_0 pilin assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000006696 218.0
PJD1_k127_2784294_1 ArgJ family K00620 - 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000001609 196.0
PJD1_k127_2784294_2 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000004377 181.0
PJD1_k127_2784294_3 - - - - 0.0000000000000000000000000000000001097 142.0
PJD1_k127_27982_0 Tripartite tricarboxylate transporter TctA family K07793 - - 4.059e-195 615.0
PJD1_k127_27982_1 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 298.0
PJD1_k127_2800856_0 Sulfate permease family K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 519.0
PJD1_k127_2800856_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 435.0
PJD1_k127_2800856_2 Dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003896 398.0
PJD1_k127_2800856_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000003523 99.0
PJD1_k127_2813018_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 561.0
PJD1_k127_2813018_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 559.0
PJD1_k127_2813018_2 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006941 417.0
PJD1_k127_2813018_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 302.0
PJD1_k127_2813018_4 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000002898 243.0
PJD1_k127_2828372_0 Translation-initiation factor 2 K02519 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 391.0
PJD1_k127_2828372_1 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000605 295.0
PJD1_k127_2858417_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 449.0
PJD1_k127_2858417_1 E-Z type HEAT repeats - - - 0.00000000000000000000000000000000000000000000000000004803 201.0
PJD1_k127_2858417_2 Response regulator receiver domain - - - 0.00000000005319 63.0
PJD1_k127_295760_0 Bifunctional enoyl-CoA hydratase phosphate acetyltransferase K00625 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 593.0
PJD1_k127_295760_1 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007936 548.0
PJD1_k127_295760_10 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000002252 177.0
PJD1_k127_295760_11 ATP-independent chaperone mediated protein folding - - - 0.0000000000000001348 86.0
PJD1_k127_295760_12 Protein of unknown function (DUF1289) K06938 - - 0.0000000000005886 72.0
PJD1_k127_295760_2 carboxylase K01965,K01968 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.4.1.3,6.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 459.0
PJD1_k127_295760_3 HMGL-like K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 448.0
PJD1_k127_295760_4 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 400.0
PJD1_k127_295760_5 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 365.0
PJD1_k127_295760_6 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 323.0
PJD1_k127_295760_7 2-hydroxychromene-2-carboxylate isomerase K14584 - 5.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000006118 225.0
PJD1_k127_295760_8 heavy metal translocating P-type ATPase K01533 - 3.6.3.4 0.0000000000000000000000000000000000000000000000000000002075 195.0
PJD1_k127_295760_9 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000002047 192.0
PJD1_k127_2983965_0 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 442.0
PJD1_k127_2983965_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 389.0
PJD1_k127_2983965_2 chorismate mutase K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 355.0
PJD1_k127_301122_0 Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 301.0
PJD1_k127_301122_1 peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000001588 169.0
PJD1_k127_301122_2 nitrate reductase molybdenum cofactor assembly chaperone K00373 - - 0.0000000000000000000000000000000000000000752 155.0
PJD1_k127_301122_3 Universal stress protein - - - 0.000000000000000000000000000000000002631 142.0
PJD1_k127_308258_0 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 421.0
PJD1_k127_308258_1 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000000000000000002581 192.0
PJD1_k127_308258_2 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000479 179.0
PJD1_k127_308258_3 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000004074 164.0
PJD1_k127_308258_4 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000003361 114.0
PJD1_k127_3142054_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 3.404e-263 822.0
PJD1_k127_3142054_1 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000004343 108.0
PJD1_k127_3142054_2 Transglycosylase SLT domain - - - 0.00002302 57.0
PJD1_k127_3170228_0 Isocitrate lyase K01637 - 4.1.3.1 8.952e-227 708.0
PJD1_k127_3170228_1 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 5.582e-217 688.0
PJD1_k127_3170228_2 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000008138 199.0
PJD1_k127_3170228_3 Belongs to the UPF0235 family K09131 - - 0.0004132 44.0
PJD1_k127_3171555_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.748e-223 708.0
PJD1_k127_3171555_1 PFAM Rieske 2Fe-2S K00499 - 1.14.15.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 501.0
PJD1_k127_3171555_2 Polyprenyl synthetase K00795 - 2.5.1.1,2.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 351.0
PJD1_k127_3171555_3 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 301.0
PJD1_k127_3171555_4 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000004223 112.0
PJD1_k127_3171555_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000001651 82.0
PJD1_k127_3174402_0 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 425.0
PJD1_k127_3174402_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 411.0
PJD1_k127_3176583_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001661 271.0
PJD1_k127_3176583_1 Glutathione S-transferase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000004569 214.0
PJD1_k127_3176583_2 Membrane K15977 - - 0.00000000000000000000000000000000000000000009123 168.0
PJD1_k127_318699_0 Amidohydrolase K10220 - 4.2.1.83 0.000000000000000000000000000000000000000000000000000000000000000000003182 252.0
PJD1_k127_318699_1 short-chain dehydrogenase reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001414 239.0
PJD1_k127_318699_2 PFAM Phosphoglycerate mutase - - - 0.00000000000000000000000000000000000000000000000000002203 196.0
PJD1_k127_3194780_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001425 276.0
PJD1_k127_3194780_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000006888 173.0
PJD1_k127_3194780_2 Preprotein translocase subunit K03210 - - 0.000000000000000000000000000000000000003097 149.0
PJD1_k127_3194780_3 - - - - 0.000000000000000000000000000003982 126.0
PJD1_k127_3195256_0 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 398.0
PJD1_k127_3195256_1 PFAM major facilitator superfamily MFS_1 K08218 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0015835,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1901264,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000006574 231.0
PJD1_k127_3195256_2 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000007763 199.0
PJD1_k127_3195256_3 Bacterial protein of unknown function (DUF883) - - - 0.000000000000000000000000000000000444 134.0
PJD1_k127_3195256_4 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00000000000001908 79.0
PJD1_k127_3196586_0 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 330.0
PJD1_k127_3196586_1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 304.0
PJD1_k127_3196586_2 Thioesterase - - - 0.00000000000000000000000000000000007971 153.0
PJD1_k127_3196794_0 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 583.0
PJD1_k127_3196794_1 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000203 202.0
PJD1_k127_3196794_2 Thioesterase - - - 0.00000000000000000000000000000000000001568 148.0
PJD1_k127_3197341_0 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006186 308.0
PJD1_k127_3197341_1 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000001081 183.0
PJD1_k127_3197341_2 Thioesterase - - - 0.00000000000000000000000000000000000000000000494 166.0
PJD1_k127_3197341_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K18361 - 1.17.5.1,3.1.2.25 0.0000000000000000000000000000000001304 141.0
PJD1_k127_3197447_0 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 1.286e-243 762.0
PJD1_k127_3197447_1 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 413.0
PJD1_k127_3197588_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007211 351.0
PJD1_k127_3197588_1 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 355.0
PJD1_k127_3197588_2 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 311.0
PJD1_k127_3197588_3 epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 315.0
PJD1_k127_319830_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 5.306e-292 921.0
PJD1_k127_319830_1 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003305 263.0
PJD1_k127_319830_2 Acetolactate synthase small K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000001589 257.0
PJD1_k127_319830_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000001728 190.0
PJD1_k127_319830_4 RDD family - - - 0.000000000000000000000005603 115.0
PJD1_k127_319830_5 Permease, YjgP YjgQ family K11720 - - 0.00000000000000000000001366 102.0
PJD1_k127_319830_6 Protein of unknown function (DUF3106) - - - 0.0000000000000000000003753 106.0
PJD1_k127_319830_7 Protein of unknown function (DUF3619) - - - 0.00000000000000002399 87.0
PJD1_k127_3200228_0 His Kinase A (phosphoacceptor) domain - - - 1.858e-266 837.0
PJD1_k127_3200228_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 1.487e-203 639.0
PJD1_k127_3200228_2 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 331.0
PJD1_k127_3200228_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002289 258.0
PJD1_k127_3200228_4 LuxR family transcriptional regulator K13041 - - 0.000000000000000000000000000000000000000000000000000000007667 204.0
PJD1_k127_3200228_5 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000000000000000000000355 116.0
PJD1_k127_3200228_6 Domain of unknown function (DUF4212) K14393 - - 0.00000000000000000000000002852 120.0
PJD1_k127_3201599_0 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 3.002e-211 662.0
PJD1_k127_3201599_1 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008993 347.0
PJD1_k127_3201599_10 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000002349 160.0
PJD1_k127_3201599_2 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007324 342.0
PJD1_k127_3201599_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 325.0
PJD1_k127_3201599_4 Belongs to the SUA5 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 295.0
PJD1_k127_3201599_5 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 282.0
PJD1_k127_3201599_6 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003241 278.0
PJD1_k127_3201599_7 S4 RNA-binding domain K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004036 278.0
PJD1_k127_3201599_8 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001115 265.0
PJD1_k127_3201599_9 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000002459 217.0
PJD1_k127_3207997_0 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000001022 193.0
PJD1_k127_3207997_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000004421 185.0
PJD1_k127_3207997_2 Protein of unknown function (DUF1428) - - - 0.0000000000000000000000000000000001373 135.0
PJD1_k127_3207997_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000001286 126.0
PJD1_k127_3207997_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000005676 98.0
PJD1_k127_3210687_0 Methylmalonyl-CoA mutase K01847,K01848,K14447,K20906 - 5.4.99.2,5.4.99.63,5.4.99.64 1.788e-230 722.0
PJD1_k127_3210687_1 B12 binding domain K01849,K20907 - 5.4.99.2,5.4.99.64 0.0000000000000000000000000000000000007179 140.0
PJD1_k127_3214509_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain - - - 3.255e-246 771.0
PJD1_k127_3214509_1 NADP oxidoreductase, coenzyme f420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001056 284.0
PJD1_k127_3214509_2 PFAM Integrase, catalytic core, phage - - - 0.000000000000000000000000000000006399 127.0
PJD1_k127_3219_0 to the hyi family K01816 - 5.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 320.0
PJD1_k127_3219_1 PFAM sodium calcium exchanger membrane region K07301 - - 0.0000000000000000000000000000000000000000000000000000000000009453 233.0
PJD1_k127_3219_2 PFAM FAD linked oxidase domain protein K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 0.00000000000000000000000153 108.0
PJD1_k127_3219_3 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.00008775 46.0
PJD1_k127_3220058_0 Periplasmic binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003193 300.0
PJD1_k127_3220058_1 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007134 286.0
PJD1_k127_3220058_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000004808 139.0
PJD1_k127_322906_0 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001213 276.0
PJD1_k127_322906_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000002109 244.0
PJD1_k127_322906_2 Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000000000000003664 162.0
PJD1_k127_3248764_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 601.0
PJD1_k127_3249334_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006218 362.0
PJD1_k127_3249334_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000002867 102.0
PJD1_k127_3249334_2 Hydrolase - - - 0.000000000193 66.0
PJD1_k127_3251797_0 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092 423.0
PJD1_k127_3251797_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 361.0
PJD1_k127_3254436_0 Belongs to the GMC oxidoreductase family - - - 3.321e-226 717.0
PJD1_k127_3254436_1 belongs to the aldehyde dehydrogenase family K00154 - 1.2.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 569.0
PJD1_k127_3254436_2 PFAM Class I peptide chain release factor K15034 - - 0.000000000000000000000000000000000000000000001669 168.0
PJD1_k127_3254436_3 Cytochrome c K17230 - - 0.00000000000000000000000000000000006157 138.0
PJD1_k127_3275781_0 Belongs to the AB hydrolase superfamily. MetX family K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 512.0
PJD1_k127_3275781_1 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 421.0
PJD1_k127_3275781_2 CoA-transferase family III K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 370.0
PJD1_k127_3275781_3 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 329.0
PJD1_k127_3275781_4 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006748 301.0
PJD1_k127_3275781_5 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003053 307.0
PJD1_k127_3276264_0 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007005 499.0
PJD1_k127_3276264_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000002754 156.0
PJD1_k127_3276264_2 Transition state regulatory protein AbrB K07120 - - 0.00000000000000000000000002499 112.0
PJD1_k127_3298665_0 Protein of unknown function (DUF445) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 332.0
PJD1_k127_3298665_1 periplasmic protein - - - 0.00000007179 64.0
PJD1_k127_3298665_2 PFAM conserved - - - 0.00003383 49.0
PJD1_k127_3311244_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009886 603.0
PJD1_k127_3311244_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 461.0
PJD1_k127_3311244_2 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000001025 213.0
PJD1_k127_3311244_3 riboflavin synthase alpha K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000112 213.0
PJD1_k127_3311244_4 ABC transporter substrate binding protein - - - 0.0000000000000000000000000000000000000000000000000000000002194 216.0
PJD1_k127_3311244_5 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.0000000000003743 73.0
PJD1_k127_3311244_6 Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0001024 46.0
PJD1_k127_3311707_0 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 512.0
PJD1_k127_3311707_1 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006222 312.0
PJD1_k127_3314173_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 2.348e-205 649.0
PJD1_k127_3314173_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14392 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 590.0
PJD1_k127_3314173_10 Tim44 - - - 0.00000000000000000000000000000000000000000000000002467 200.0
PJD1_k127_3314173_11 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000001146 181.0
PJD1_k127_3314173_12 Ferredoxin - - - 0.0000000000000000000000000000000000000001217 167.0
PJD1_k127_3314173_13 PFAM Sterol-binding domain protein K03690 - - 0.000000000000000000000000000003597 127.0
PJD1_k127_3314173_14 Belongs to the methyltransferase superfamily K07444 - - 0.0000000000000003526 80.0
PJD1_k127_3314173_15 - - - - 0.0002881 46.0
PJD1_k127_3314173_2 PFAM ABC transporter related K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 430.0
PJD1_k127_3314173_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 371.0
PJD1_k127_3314173_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 340.0
PJD1_k127_3314173_5 THUMP K07444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004708 293.0
PJD1_k127_3314173_6 ABC-2 type transporter K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004194 307.0
PJD1_k127_3314173_7 hydrolase of the alpha beta superfamily K07018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007622 251.0
PJD1_k127_3314173_8 VanZ like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003624 251.0
PJD1_k127_3314173_9 Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000000000000000000002995 213.0
PJD1_k127_3319874_0 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 394.0
PJD1_k127_3319874_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000007928 223.0
PJD1_k127_3319874_2 Protein of unknown function (DUF2782) - - - 0.00000000000000000000000008798 109.0
PJD1_k127_3319874_3 - - - - 0.00000000000000001093 91.0
PJD1_k127_3322143_0 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000558 460.0
PJD1_k127_3322143_1 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 417.0
PJD1_k127_3322143_2 Enoyl-(Acyl carrier protein) reductase K03793 - 1.5.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000129 291.0
PJD1_k127_3322143_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000003376 238.0
PJD1_k127_3322143_4 PFAM aldo keto reductase - - - 0.000000000000000000009227 93.0
PJD1_k127_3323117_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009445 537.0
PJD1_k127_3323117_1 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 357.0
PJD1_k127_3323117_2 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000003666 92.0
PJD1_k127_333605_0 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 511.0
PJD1_k127_333605_1 Cytochrome c K17230 - - 0.0000000000000000000000000000000000000000000004144 174.0
PJD1_k127_333605_2 Aldehyde dehydrogenase 3 family, member A2 K00128 - 1.2.1.3 0.0000000000000002824 88.0
PJD1_k127_3337509_0 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 511.0
PJD1_k127_3337509_1 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 492.0
PJD1_k127_3344835_0 TonB dependent receptor K02014 - - 1.396e-201 649.0
PJD1_k127_3344835_1 PFAM glycosyl transferase family 9 K02849 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 424.0
PJD1_k127_3347558_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 - 1.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 394.0
PJD1_k127_3347558_1 - - - - 0.000000000000001955 90.0
PJD1_k127_3364917_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000615 342.0
PJD1_k127_3364917_1 Endoribonuclease L-PSP - - - 0.000000000000000000000000007305 115.0
PJD1_k127_3379327_0 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005106 433.0
PJD1_k127_3379327_1 HMGL-like K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 420.0
PJD1_k127_3379327_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 338.0
PJD1_k127_3379327_3 Catechol dioxygenase N terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 305.0
PJD1_k127_3379327_4 Acetyltransferase (GNAT) domain K03829 - - 0.0000000000000000000000000000000000000000000000000000000001066 207.0
PJD1_k127_3379327_5 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01706 - 4.2.1.40 0.0000000000000000000000000000000000000000000000000000002916 209.0
PJD1_k127_3379327_6 Addiction module toxin, RelE StbE family K07334 - - 0.000000000000000000000000000000000009673 137.0
PJD1_k127_3379327_7 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000000000000009827 134.0
PJD1_k127_3382000_0 PFAM FAD linked oxidase domain protein K00102,K03777 - 1.1.2.4,1.1.5.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 606.0
PJD1_k127_3382000_1 Belongs to the GPI family K01810 - 5.3.1.9 0.000000000000000000000000000008758 121.0
PJD1_k127_3382000_2 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000003324 87.0
PJD1_k127_3400362_0 aldo keto reductase K00011 - 1.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 286.0
PJD1_k127_3400362_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000006257 240.0
PJD1_k127_3400362_2 Methyltransferase - - - 0.0000000000000000000000000000000000006349 140.0
PJD1_k127_3400800_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 1.162e-282 885.0
PJD1_k127_3405850_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 4.397e-209 654.0
PJD1_k127_3405850_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005746 488.0
PJD1_k127_3405850_2 RNA polymerase II CTD heptapeptide repeat phosphatase activity K01426,K03457,K20827 GO:0000428,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008420,GO:0009058,GO:0009059,GO:0009301,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016073,GO:0016311,GO:0016591,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0030154,GO:0030880,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032502,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036211,GO:0042578,GO:0042795,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070063,GO:0070940,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0098781,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1902494,GO:1903506,GO:1990234,GO:2000112,GO:2001141 3.1.3.16,3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000669 369.0
PJD1_k127_3405850_3 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000003039 269.0
PJD1_k127_3408212_0 aminopeptidase N K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000001151 238.0
PJD1_k127_3408212_1 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000004099 233.0
PJD1_k127_3408212_2 NnrU protein - - - 0.00000000000000000000000000000000000000000000000216 189.0
PJD1_k127_3410699_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006692 432.0
PJD1_k127_3410699_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 335.0
PJD1_k127_3410699_2 LAO AO transport system ATPase K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000005428 233.0
PJD1_k127_3410699_3 alkaline phosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000002745 180.0
PJD1_k127_3411771_0 Uncharacterized protein family UPF0004 K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007457 362.0
PJD1_k127_3411771_1 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 339.0
PJD1_k127_3411771_2 Membrane-bound lytic murein transglycosylase K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000002084 235.0
PJD1_k127_3411771_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000001978 204.0
PJD1_k127_3411771_4 - - - - 0.000000000001109 73.0
PJD1_k127_3414754_0 Protein of unknown function (DUF2817) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003542 466.0
PJD1_k127_3414754_1 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009619 316.0
PJD1_k127_3414754_2 Alpha/beta hydrolase family K01055 - 3.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005411 298.0
PJD1_k127_3414754_3 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 0.0000000000000000000000000000000000000000000000000000000000000000005469 230.0
PJD1_k127_3414754_4 - - - - 0.0000000000000000000000000000000006346 137.0
PJD1_k127_3414754_5 Protein of unknown function (DUF3567) - - - 0.0000000000000001093 83.0
PJD1_k127_3426161_0 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001802 279.0
PJD1_k127_3426161_1 PFAM sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000907 260.0
PJD1_k127_344294_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 4.726e-292 902.0
PJD1_k127_344294_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009008 394.0
PJD1_k127_344294_2 oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 369.0
PJD1_k127_344294_3 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 322.0
PJD1_k127_344294_4 Involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000009682 234.0
PJD1_k127_344294_5 oxidase assembly K02258 - - 0.000000000000000000000000000000000000000000000000000000000000000001658 231.0
PJD1_k127_344294_6 SURF1-like protein - - - 0.00000000000000000000000000000000000000000003742 169.0
PJD1_k127_344294_7 signal sequence binding - - - 0.00000000000000000000000000000000000000002808 158.0
PJD1_k127_344294_8 Protein of unknown function (DUF2909) - - - 0.0000000000005036 74.0
PJD1_k127_3460298_0 Ferrous iron transport protein B K04759 - - 5.314e-227 717.0
PJD1_k127_3460298_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 362.0
PJD1_k127_3460298_2 metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000008055 195.0
PJD1_k127_3469155_0 Domain of unknown function (DUF4872) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 465.0
PJD1_k127_3469155_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 391.0
PJD1_k127_3469155_2 ABC-2 type transporter K01992 - - 0.0004343 52.0
PJD1_k127_3472988_0 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 400.0
PJD1_k127_3472988_1 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 379.0
PJD1_k127_3472988_2 2-Keto-4-pentenoate hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000003888 226.0
PJD1_k127_3472988_3 NfeD-like C-terminal, partner-binding - - - 0.000000000001034 74.0
PJD1_k127_3482529_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 9.711e-213 680.0
PJD1_k127_3482529_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 368.0
PJD1_k127_3482529_2 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000000000000003643 162.0
PJD1_k127_3482529_3 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000004073 136.0
PJD1_k127_3482529_4 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.00000000000000000000000005865 110.0
PJD1_k127_349319_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 389.0
PJD1_k127_349319_1 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003679 275.0
PJD1_k127_349319_2 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001566 259.0
PJD1_k127_349319_3 DNA replication, recombination and repair K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000002237 255.0
PJD1_k127_349319_4 bacterial (prokaryotic) histone like domain K03530 - - 0.000000000000000000006696 97.0
PJD1_k127_349319_5 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000003874 78.0
PJD1_k127_3495893_0 PFAM ATPase associated with various cellular activities, AAA_3 K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 420.0
PJD1_k127_3495893_1 histone deacetylase - - - 0.00000000000000000000000000000000000004567 150.0
PJD1_k127_3529832_0 Activates fatty acids by binding to coenzyme A K00666 - - 9.998e-194 616.0
PJD1_k127_3529832_1 Pfam:DUF461 K09796 - - 0.000000000000000000000000000002733 126.0
PJD1_k127_3542775_0 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 550.0
PJD1_k127_3542775_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008773 523.0
PJD1_k127_3542775_2 ABC transporter, transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000000001964 191.0
PJD1_k127_3558116_0 Proton-conducting membrane transporter - - - 3.35e-287 900.0
PJD1_k127_3558116_1 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 443.0
PJD1_k127_3558116_2 COG4237 Hydrogenase 4 membrane component (E) K12140 - - 0.0000000000000000000000000000000000000000000000001436 194.0
PJD1_k127_3558116_3 Penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000007244 111.0
PJD1_k127_3568287_0 DnaJ C terminal domain K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 334.0
PJD1_k127_3568287_1 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001397 265.0
PJD1_k127_3568287_2 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002875 256.0
PJD1_k127_3568287_3 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000005392 250.0
PJD1_k127_3568287_4 KR domain K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000001973 231.0
PJD1_k127_3568287_6 - - - - 0.00000000000113 80.0
PJD1_k127_3606903_0 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006198 531.0
PJD1_k127_3606903_1 N-terminal domain of oxidoreductase K07119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 524.0
PJD1_k127_3606903_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000006772 253.0
PJD1_k127_3610657_0 B12 binding domain K00548 - 2.1.1.13 0.0 1413.0
PJD1_k127_3610657_1 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 355.0
PJD1_k127_3610657_2 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000008969 243.0
PJD1_k127_3610657_3 Thioesterase superfamily - - - 0.00000000000000000009017 104.0
PJD1_k127_3617797_0 Na dependent nucleoside transporter K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 436.0
PJD1_k127_3617797_1 UPF0761 membrane protein K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 325.0
PJD1_k127_3617797_2 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000006522 247.0
PJD1_k127_3617797_3 Belongs to the WrbA family K03809 - 1.6.5.2 0.00000000000000000000008978 113.0
PJD1_k127_3679464_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006508 449.0
PJD1_k127_3679464_1 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006657 445.0
PJD1_k127_3679464_3 Regulatory protein SoxS - - - 0.0000006028 59.0
PJD1_k127_3692573_0 Paraquat-inducible protein B K06192 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 531.0
PJD1_k127_3692573_1 Amidohydrolase K01686 - 4.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 497.0
PJD1_k127_3692573_2 paraquat-inducible protein a K03808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 451.0
PJD1_k127_3692573_3 COG3119 Arylsulfatase A and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 400.0
PJD1_k127_3692573_4 CBS domain - - - 0.00000000000000000000000000000000000000000000003639 175.0
PJD1_k127_3692573_5 ABC-type transport auxiliary lipoprotein component K09857 - - 0.000000000000000000000003632 119.0
PJD1_k127_3692573_6 Outer membrane lipoprotein-sorting protein - - - 0.000000000000007422 88.0
PJD1_k127_37053_0 PFAM EAL domain, GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009181 536.0
PJD1_k127_3714204_0 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006084,GO:0006139,GO:0006163,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009117,GO:0009150,GO:0009259,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019442,GO:0019637,GO:0019693,GO:0019752,GO:0020037,GO:0022607,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043603,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051186,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0072521,GO:0097159,GO:1901135,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 391.0
PJD1_k127_3714204_1 Aminotransferase class-V K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 375.0
PJD1_k127_3714204_2 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000004863 197.0
PJD1_k127_3714204_3 PFAM Acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000001067 119.0
PJD1_k127_385265_0 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 554.0
PJD1_k127_385265_1 membrane transporter protein K07090 - - 0.0000000000000002518 84.0
PJD1_k127_3881710_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007568 472.0
PJD1_k127_3881710_1 PFAM fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 327.0
PJD1_k127_3881710_2 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 291.0
PJD1_k127_3881710_3 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000003921 153.0
PJD1_k127_3881710_4 Ribosomal L28 family K02902 - - 0.0000000000000000000000000009858 114.0
PJD1_k127_3881710_5 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000001958 94.0
PJD1_k127_3942781_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.035e-234 745.0
PJD1_k127_3942781_1 ribosomal large subunit export from nucleus - - - 0.000000000000000000000000000000000000000007505 160.0
PJD1_k127_3942781_2 Protein conserved in bacteria - - - 0.00000000000000000000000000000001549 126.0
PJD1_k127_3964857_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006133 476.0
PJD1_k127_3964857_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 427.0
PJD1_k127_3964857_2 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001555 250.0
PJD1_k127_3964857_3 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000004006 172.0
PJD1_k127_3967521_0 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 302.0
PJD1_k127_3967521_1 phytoene K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000002388 250.0
PJD1_k127_3970300_0 Putative serine dehydratase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255 422.0
PJD1_k127_3970300_1 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 347.0
PJD1_k127_3974656_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 1.334e-196 618.0
PJD1_k127_3974656_1 Cysteine-rich domain K21834 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 458.0
PJD1_k127_3974656_2 cation diffusion facilitator family transporter K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009391 401.0
PJD1_k127_3974656_3 nitrate reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000002926 221.0
PJD1_k127_3974656_4 PFAM glutaredoxin - - - 0.0000000000000000000000000000000000000000000003286 176.0
PJD1_k127_3984643_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 GO:0000287,GO:0003674,GO:0003824,GO:0004738,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0019842,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363,GO:1901681 1.2.4.1 1.027e-231 723.0
PJD1_k127_3984643_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 336.0
PJD1_k127_3984643_2 Peptidase family M3 K01414 - 3.4.24.70 0.000000000000000000000000000000000000000000000000000002952 194.0
PJD1_k127_3985997_0 transcriptional Regulator, LysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008174 250.0
PJD1_k127_3985997_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000001081 188.0
PJD1_k127_3989087_0 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 367.0
PJD1_k127_3989087_1 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 360.0
PJD1_k127_3989087_2 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 287.0
PJD1_k127_3989087_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003593 273.0
PJD1_k127_3989087_4 Diaminopimelate epimerase K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000003371 198.0
PJD1_k127_3989087_5 CoA-binding protein K06929 - - 0.000000000000000000000000000000000000001015 154.0
PJD1_k127_3989087_6 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000001474 100.0
PJD1_k127_3994761_0 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003176 580.0
PJD1_k127_3994761_1 oxidoreductase FAD NAD(P)-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 484.0
PJD1_k127_3994761_2 PFAM Glycosyl transferase, family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 454.0
PJD1_k127_3994761_3 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 387.0
PJD1_k127_3994761_4 response regulator receiver K07684 - - 0.00000000000000000000000000000000000000000000000000000000000000235 225.0
PJD1_k127_3994761_5 Histidine kinase K07673 - 2.7.13.3 0.00000000000000000000000000000000000000000000001402 177.0
PJD1_k127_3994761_6 Rieske-like [2Fe-2S] domain K14750 - - 0.0000000000000000000000000002706 117.0
PJD1_k127_3994763_0 Bacterial protein of unknown function (DUF853) K06915 - - 1.443e-227 714.0
PJD1_k127_3994763_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 386.0
PJD1_k127_3994763_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005452 270.0
PJD1_k127_3994763_3 transcriptional regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000002575 198.0
PJD1_k127_3994763_4 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000002662 196.0
PJD1_k127_4003256_0 abc transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009626 346.0
PJD1_k127_4003256_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002959 258.0
PJD1_k127_4003256_2 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.000000000000000000000000000000000000000000000000000000008729 200.0
PJD1_k127_4003256_3 SelR domain K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000004662 175.0
PJD1_k127_4003256_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000001665 59.0
PJD1_k127_4004891_0 Acyl-CoA dehydrogenase N terminal K20035 - - 4.591e-248 778.0
PJD1_k127_4004891_1 Electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007749 246.0
PJD1_k127_4004891_2 CoA binding domain K09181 - - 0.00000000000000000000000000000000004306 143.0
PJD1_k127_4004891_3 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.0000000000000000000000000000009395 120.0
PJD1_k127_4006862_0 Penicillin-binding protein 2 K05515 - 3.4.16.4 4.907e-264 835.0
PJD1_k127_4006862_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 2.128e-224 704.0
PJD1_k127_4006862_2 Rod shape-determining protein MreB K03569 - - 1.891e-196 616.0
PJD1_k127_4006862_3 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009704 282.0
PJD1_k127_4006862_4 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000001038 212.0
PJD1_k127_4006862_5 rod shape-determining protein MreD K03571 - - 0.0000000000000000000000000000000000000000003451 169.0
PJD1_k127_4006862_6 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000001438 118.0
PJD1_k127_4011237_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 2.792e-221 689.0
PJD1_k127_4011237_1 Putative nucleotide-binding of sugar-metabolising enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001368 249.0
PJD1_k127_4016633_0 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001711 276.0
PJD1_k127_4016633_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000003799 234.0
PJD1_k127_4016633_2 phosphatase homologous to the C-terminal domain of histone macroH2A1 K07478 - - 0.0000000000000000000000000000000004652 147.0
PJD1_k127_4016633_3 peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000001558 74.0
PJD1_k127_4016633_4 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000001774 59.0
PJD1_k127_4021852_0 Protein of unknown function, DUF255 K06888 - - 2.181e-248 788.0
PJD1_k127_4021852_1 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 470.0
PJD1_k127_4021852_2 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 480.0
PJD1_k127_4021852_3 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 395.0
PJD1_k127_4021852_4 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009369 357.0
PJD1_k127_4021852_5 AAA domain, putative AbiEii toxin, Type IV TA system K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000604 251.0
PJD1_k127_4021852_6 Cytochrome c K08738 - - 0.00000000000000000000000000000832 122.0
PJD1_k127_4021852_7 PFAM Bacterial protein of - - - 0.000000000000000000000004999 108.0
PJD1_k127_4021914_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1142.0
PJD1_k127_4021914_1 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 387.0
PJD1_k127_4021914_10 Protein of unknown function (DUF2946) - - - 0.000000000000000000000000000000000001214 151.0
PJD1_k127_4021914_2 Endonuclease Exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006438 311.0
PJD1_k127_4021914_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 332.0
PJD1_k127_4021914_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002319 249.0
PJD1_k127_4021914_5 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000007507 221.0
PJD1_k127_4021914_6 dehydratase - - - 0.00000000000000000000000000000000000000000000000000000144 204.0
PJD1_k127_4021914_7 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000000000000000000005943 184.0
PJD1_k127_4021914_8 PFAM NUDIX hydrolase K08310 - 3.6.1.67 0.0000000000000000000000000000000000000000000000003669 181.0
PJD1_k127_4021914_9 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000008812 162.0
PJD1_k127_4022078_0 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 1.226e-226 708.0
PJD1_k127_4022078_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 1.013e-196 623.0
PJD1_k127_4022078_2 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004259 264.0
PJD1_k127_4022078_3 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000000394 205.0
PJD1_k127_4022078_4 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000000000000000000000000000005289 171.0
PJD1_k127_4022078_5 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000000000000000008594 141.0
PJD1_k127_4022078_6 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000000003487 132.0
PJD1_k127_4022078_7 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.00000000000005851 80.0
PJD1_k127_4026608_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1189.0
PJD1_k127_4026608_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000497 565.0
PJD1_k127_4026608_2 DNA polymerase III (Chi subunit) K02339 - 2.7.7.7 0.00000000000000000000000000000000001273 140.0
PJD1_k127_4026608_3 iron ion homeostasis - - - 0.000000000000000000008799 93.0
PJD1_k127_4029006_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1307.0
PJD1_k127_4029006_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 351.0
PJD1_k127_4029006_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002475 256.0
PJD1_k127_4029006_3 Cupin 2, conserved barrel - - - 0.00000000000000000000000000000000000000000000003619 173.0
PJD1_k127_4029006_4 - - - - 0.00000001079 58.0
PJD1_k127_4033262_0 PFAM SMP-30 Gluconolaconase LRE domain protein K01053,K14274 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008633 470.0
PJD1_k127_4033262_1 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 360.0
PJD1_k127_4033262_2 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000006697 134.0
PJD1_k127_4033262_3 Protein of unknown function (DUF993) - - - 0.000000000000008832 74.0
PJD1_k127_4038907_0 Translation elongation factor K03833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 351.0
PJD1_k127_4038907_1 ADP-ribosylglycohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002603 281.0
PJD1_k127_4043000_0 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005379 300.0
PJD1_k127_4043000_1 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000001106 241.0
PJD1_k127_4043000_2 Preprotein translocase subunit SecG K03075 - - 0.000000000000000006878 85.0
PJD1_k127_4043000_3 Fumarate reductase subunit D - - - 0.000002041 51.0
PJD1_k127_4056078_0 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 490.0
PJD1_k127_4056078_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 366.0
PJD1_k127_4056078_2 Acyl-transferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000939 284.0
PJD1_k127_4056078_3 protein, Hemolysin III K11068 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002347 265.0
PJD1_k127_4056078_4 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000000000001223 212.0
PJD1_k127_4056078_5 Dodecin K09165 - - 0.000000000000000000004939 96.0
PJD1_k127_4071125_0 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000000000000009758 177.0
PJD1_k127_4071125_1 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000001197 145.0
PJD1_k127_4071125_2 Bacterial SH3 domain - - - 0.0000000000000000000000000000000007267 143.0
PJD1_k127_4071125_3 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000000000001659 110.0
PJD1_k127_4071125_4 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000001045 98.0
PJD1_k127_4071125_5 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.000000000000003401 75.0
PJD1_k127_4072518_0 CobB/CobQ-like glutamine amidotransferase domain K01952 - 6.3.5.3 0.0 1482.0
PJD1_k127_4080192_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 0.0 1126.0
PJD1_k127_4080192_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 6.076e-207 646.0
PJD1_k127_4080192_2 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007871 416.0
PJD1_k127_4080192_3 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000001059 147.0
PJD1_k127_4080192_4 Protein of unknown function (DUF2442) - - - 0.00000000004487 66.0
PJD1_k127_4080192_5 - K11275 - - 0.00000293 53.0
PJD1_k127_4089496_0 Diguanylate cyclase - - - 0.0 1080.0
PJD1_k127_4089496_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 5.125e-248 777.0
PJD1_k127_4089496_2 Oxidative deamination of D-amino acids K00285 - 1.4.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 482.0
PJD1_k127_4089496_3 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005631 453.0
PJD1_k127_4089496_4 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 405.0
PJD1_k127_4089496_5 Enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 371.0
PJD1_k127_4089496_6 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 355.0
PJD1_k127_4089496_7 GGDEF domain K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000959 170.0
PJD1_k127_4089496_8 - - - - 0.0000000000001255 72.0
PJD1_k127_4092787_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004692 382.0
PJD1_k127_4092787_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000001856 232.0
PJD1_k127_4092787_2 dna polymerase iii K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000009552 182.0
PJD1_k127_409915_0 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 284.0
PJD1_k127_409915_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009467 280.0
PJD1_k127_4107697_0 carboxylase K01969 - 6.4.1.4 1.555e-279 866.0
PJD1_k127_4107697_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 510.0
PJD1_k127_4107697_2 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004404 280.0
PJD1_k127_4107697_3 thiolester hydrolase activity K17362 - - 0.000000000000000000000000000002568 123.0
PJD1_k127_4118866_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 471.0
PJD1_k127_4118866_1 PFAM short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 407.0
PJD1_k127_4118866_2 Protein of unknown function (DUF2917) - - - 0.00004682 47.0
PJD1_k127_4137705_0 Penicillin-binding protein 5, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 473.0
PJD1_k127_4137705_1 Lytic transglycolase K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 325.0
PJD1_k127_4154600_0 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 8.104e-285 891.0
PJD1_k127_4154600_1 Transcriptional regulator K19591 - - 0.0000000000000000000000000000000000000000000004596 171.0
PJD1_k127_4164242_0 PFAM conserved K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 338.0
PJD1_k127_4164242_1 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 324.0
PJD1_k127_4164242_2 Tripartite tricarboxylate transporter TctA K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001123 263.0
PJD1_k127_4164242_3 CcmB protein K01992 - - 0.00000000000000000000000000006199 128.0
PJD1_k127_4164242_4 Tripartite tricarboxylate transporter TctB family K07794 - - 0.000000000000000001341 94.0
PJD1_k127_4182149_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01908 - 6.2.1.17 3.383e-301 934.0
PJD1_k127_4182149_1 alcohol dehydrogenase - - - 0.00000000000000000000000000000001711 128.0
PJD1_k127_4190246_0 PFAM AFG1-family ATPase K06916 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004441 431.0
PJD1_k127_4190246_1 alcohol dehydrogenase K00001 - 1.1.1.1 0.000000000000000000003973 95.0
PJD1_k127_4190246_2 EamA-like transporter family - - - 0.00000000000000001503 83.0
PJD1_k127_4209544_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 3.136e-266 833.0
PJD1_k127_4271857_0 Proton-conducting membrane transporter - - - 3.14e-266 839.0
PJD1_k127_4271857_1 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 448.0
PJD1_k127_4271857_2 hydrogenase 4 membrane K12140 - - 0.000000000000000000000000000000000000000000000002758 175.0
PJD1_k127_4271857_3 PFAM CopG domain protein DNA-binding domain protein - - - 0.000000000000000000005824 94.0
PJD1_k127_4281764_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 317.0
PJD1_k127_4281764_1 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 298.0
PJD1_k127_4281764_2 AAA domain K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003376 280.0
PJD1_k127_4281919_0 Fumarate reductase flavoprotein C-term K00239,K00244 - 1.3.5.1,1.3.5.4 9.974e-267 829.0
PJD1_k127_4281919_1 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000001365 131.0
PJD1_k127_4282674_0 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 520.0
PJD1_k127_4282674_1 phosphate transport regulator K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003947 283.0
PJD1_k127_4282674_2 Amidohydrolase K10220 - 4.2.1.83 0.00000000000000000000000000000005275 127.0
PJD1_k127_4282748_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008289 550.0
PJD1_k127_4282748_1 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 306.0
PJD1_k127_4282748_2 Belongs to the BolA IbaG family - - - 0.0000000000000000000000000009232 113.0
PJD1_k127_4282748_3 Transport permease protein K01992 - - 0.0000000000000000000007966 95.0
PJD1_k127_4282748_4 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000008472 55.0
PJD1_k127_4307446_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 6.739e-254 789.0
PJD1_k127_4307446_1 Enoyl-(Acyl carrier protein) reductase K00019 - 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 332.0
PJD1_k127_4307446_2 Glutathione S-Transferase K00799 GO:0003674,GO:0003824,GO:0004364,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016740,GO:0016765,GO:0030611,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0055114 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000002215 242.0
PJD1_k127_4307446_3 zinc protease protein - - - 0.0000004346 54.0
PJD1_k127_4309912_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 625.0
PJD1_k127_4309912_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 617.0
PJD1_k127_4309912_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 548.0
PJD1_k127_4309912_3 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 533.0
PJD1_k127_4309912_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007138 376.0
PJD1_k127_4309912_5 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 340.0
PJD1_k127_4309912_6 type 4 pilus biogenesis protein K02656 - - 0.00000000000000000000000000000000000000000000000000000000000000000943 243.0
PJD1_k127_4309912_7 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000008775 195.0
PJD1_k127_4309912_8 Domain of unknown function (DUF4115) K15539 - - 0.00000000000000000000000000000000000001964 158.0
PJD1_k127_433745_0 type II secretion system protein K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 580.0
PJD1_k127_433745_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000331 212.0
PJD1_k127_4345863_0 Polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 392.0
PJD1_k127_4345863_1 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003824 288.0
PJD1_k127_4345863_2 KR domain - - - 0.000000000000000000000000001879 113.0
PJD1_k127_4362146_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1139.0
PJD1_k127_4362146_1 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000003733 206.0
PJD1_k127_4362146_2 Serine aminopeptidase, S33 - - - 0.0001219 48.0
PJD1_k127_4363388_0 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 3.834e-194 617.0
PJD1_k127_4363388_1 DDE superfamily endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 409.0
PJD1_k127_4363388_2 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000002693 126.0
PJD1_k127_4363388_3 membrane - - - 0.0000000000000000000000000001406 116.0
PJD1_k127_4439595_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1278.0
PJD1_k127_4439595_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000002105 157.0
PJD1_k127_4439595_2 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline K12960 - 3.5.4.28,3.5.4.31 0.00000000002643 64.0
PJD1_k127_4455192_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 594.0
PJD1_k127_4455192_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000006792 205.0
PJD1_k127_4455192_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000003023 136.0
PJD1_k127_4457157_0 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 410.0
PJD1_k127_4457157_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 364.0
PJD1_k127_4457157_2 COG0631 Serine threonine protein phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001336 282.0
PJD1_k127_4457157_3 Stress-induced protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000118 273.0
PJD1_k127_4457157_4 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000008302 238.0
PJD1_k127_4457157_5 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000001852 228.0
PJD1_k127_4457157_6 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0000000000000000000000000000009434 123.0
PJD1_k127_4457157_7 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000006425 109.0
PJD1_k127_4457157_8 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000009192 74.0
PJD1_k127_4464421_0 BadF/BadG/BcrA/BcrD ATPase family K04115 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006387 372.0
PJD1_k127_4464421_1 Vitamin k epoxide reductase - - - 0.0000000000000000000000000000000000000001513 166.0
PJD1_k127_4464421_2 Benzoyl-CoA reductase subunit K04114 - 1.3.7.8 0.0000000000000000000000000000000000000004475 150.0
PJD1_k127_4464421_3 Ferredoxin K05337 - - 0.0000000000000000000000000000000002667 132.0
PJD1_k127_4464421_4 Iron-sulfur cluster assembly protein - - - 0.00000000000000000000000391 105.0
PJD1_k127_4484741_0 Transcriptional regulator K13634 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 433.0
PJD1_k127_4484741_1 PHB de-polymerase C-terminus K05973 - 3.1.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 282.0
PJD1_k127_4484741_2 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381,K00392 - 1.8.1.2,1.8.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000829 256.0
PJD1_k127_4501102_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000682 616.0
PJD1_k127_4501102_1 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 431.0
PJD1_k127_4501102_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 GO:0002943,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050896,GO:0055114,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 398.0
PJD1_k127_4501102_3 FAD binding domain K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000142 266.0
PJD1_k127_4501102_4 Nucleotidyl transferase K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000001163 252.0
PJD1_k127_4501102_5 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000004796 137.0
PJD1_k127_4501102_6 Belongs to the transcriptional regulatory Fis family K03557 - - 0.000000000000000000005851 104.0
PJD1_k127_4524942_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009726 469.0
PJD1_k127_4524942_1 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000003088 171.0
PJD1_k127_4531497_0 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 429.0
PJD1_k127_4531497_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 329.0
PJD1_k127_4531497_2 peptidase M48, Ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000005215 252.0
PJD1_k127_4547621_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009233 284.0
PJD1_k127_4547621_1 COG1226 Kef-type K transport systems K10716 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000001858 241.0
PJD1_k127_4547621_2 - - - - 0.0000000000004221 74.0
PJD1_k127_4644984_0 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 363.0
PJD1_k127_4644984_1 Required for insertion of 4Fe-4S clusters K15724 - - 0.0000000000000000000000000000000000000000000000000000000001277 207.0
PJD1_k127_4644984_2 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000000000000003943 167.0
PJD1_k127_4644984_3 - - - - 0.000000000000000000000000009617 115.0
PJD1_k127_468723_0 A G-specific K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 368.0
PJD1_k127_468723_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 315.0
PJD1_k127_470399_0 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009788 571.0
PJD1_k127_470399_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11745,K11747 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008615 515.0
PJD1_k127_470399_2 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001157 277.0
PJD1_k127_470399_3 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.00000000000000000000000000000000000000000000000000003922 193.0
PJD1_k127_470399_4 PFAM pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07226 - - 0.00000000000000000001557 97.0
PJD1_k127_4762332_0 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 523.0
PJD1_k127_4762332_1 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000534 491.0
PJD1_k127_4762332_2 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000536 488.0
PJD1_k127_4762332_3 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 292.0
PJD1_k127_4762332_4 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002779 291.0
PJD1_k127_4762332_5 cytochrome - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000169 256.0
PJD1_k127_4762332_6 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000000001925 202.0
PJD1_k127_4762332_7 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000000000002551 206.0
PJD1_k127_4762332_8 protein involved in tolerance to divalent cations K03926 - - 0.00000000000000000000000000000000000000001149 156.0
PJD1_k127_4762332_9 Cytochrome C' - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000002426 126.0
PJD1_k127_4764406_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0017076,GO:0017111,GO:0019001,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046906,GO:0047727,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564 5.4.99.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009384 556.0
PJD1_k127_4764406_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 403.0
PJD1_k127_4764406_2 Aldolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 301.0
PJD1_k127_4784155_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000000002277 108.0
PJD1_k127_4784155_1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000844 98.0
PJD1_k127_4786586_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 457.0
PJD1_k127_4786586_1 Major facilitator superfamily MFS_1 K02445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 410.0
PJD1_k127_4786586_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 340.0
PJD1_k127_4787348_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0000183,GO:0001302,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0016874,GO:0016879,GO:0018130,GO:0019219,GO:0019222,GO:0019357,GO:0019358,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032502,GO:0034641,GO:0034654,GO:0040029,GO:0043094,GO:0043173,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046497,GO:0048519,GO:0048523,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051252,GO:0051253,GO:0051276,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007193 533.0
PJD1_k127_4787348_1 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 414.0
PJD1_k127_4787348_2 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000693 384.0
PJD1_k127_4787348_3 NADH dehydrogenase NAD(P)H nitroreductase K09019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 283.0
PJD1_k127_4787348_4 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003383 277.0
PJD1_k127_4787348_5 Proline racemase - - - 0.0000000000000000000000000000000000007617 141.0
PJD1_k127_4788682_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 9.231e-195 623.0
PJD1_k127_4788682_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 358.0
PJD1_k127_4788682_2 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit K00162,K21417 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 340.0
PJD1_k127_4788682_3 PFAM Transketolase central region K00162,K21417 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000315 235.0
PJD1_k127_4788682_4 COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit K00161,K21416 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000004471 241.0
PJD1_k127_4788682_5 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000003254 170.0
PJD1_k127_4788682_6 PFAM Tripartite ATP-independent periplasmic transporter, DctQ component - - - 0.0000000000000000000000000000000000000000003803 162.0
PJD1_k127_4788682_7 - - - - 0.0000000000000001046 90.0
PJD1_k127_4788682_8 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005504,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0008289,GO:0009405,GO:0009987,GO:0015036,GO:0016020,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0030312,GO:0031405,GO:0031406,GO:0032991,GO:0033293,GO:0036094,GO:0040007,GO:0042592,GO:0043167,GO:0043168,GO:0043177,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0045454,GO:0048037,GO:0050662,GO:0050789,GO:0050794,GO:0051704,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0097159,GO:1901363,GO:1901681,GO:1902494,GO:1990204 2.3.1.61 0.000000000001405 79.0
PJD1_k127_4788682_9 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000004182 68.0
PJD1_k127_4800483_0 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 379.0
PJD1_k127_4800483_1 COG0604 NADPH quinone reductase and related Zn-dependent K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008295 332.0
PJD1_k127_4800483_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 321.0
PJD1_k127_4800483_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000007316 174.0
PJD1_k127_4803113_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 2.468e-249 786.0
PJD1_k127_4803113_1 YaeQ - - - 0.0000000000000000000000000000000000000000003865 160.0
PJD1_k127_4807030_0 Acyclic terpene utilisation family protein AtuA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005708 533.0
PJD1_k127_4807030_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000003135 78.0
PJD1_k127_4808122_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.717e-234 733.0
PJD1_k127_4808122_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 5.993e-209 657.0
PJD1_k127_4808122_2 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000000000000004046 222.0
PJD1_k127_4808122_3 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000003499 192.0
PJD1_k127_4808122_4 Oligoketide cyclase lipid transport protein - - - 0.0000000000000000000000000000000000005005 146.0
PJD1_k127_4808122_5 Domain of unknown function (DUF4124) - - - 0.000000000000003943 83.0
PJD1_k127_4808122_6 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000002414 62.0
PJD1_k127_4808776_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 381.0
PJD1_k127_4808776_1 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 331.0
PJD1_k127_4808776_2 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000000000000000000000000000000000000000000000000002259 204.0
PJD1_k127_4808776_3 ribosomal subunit interface protein K05808 - - 0.00000000000000000000000000000001312 129.0
PJD1_k127_4814861_0 Bacterial type II and III secretion system protein K02666 - - 1.213e-236 761.0
PJD1_k127_4814861_1 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000002817 191.0
PJD1_k127_4814861_2 Pilus assembly protein, PilP K02665 - - 0.0000000000000000000000000000000000000000009258 165.0
PJD1_k127_4814861_3 Pilus assembly protein, PilO K02664 - - 0.00000000005594 63.0
PJD1_k127_4816317_0 Cytochrome c554 and c-prime - - - 1.046e-216 690.0
PJD1_k127_4816317_1 Ferrous iron transport protein B K04759 - - 0.00000000000000000000000001038 115.0
PJD1_k127_4816317_2 Cytochrome c - - - 0.00000000000000000000006863 108.0
PJD1_k127_4817447_0 Cell division ATP-binding protein ftsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007028 282.0
PJD1_k127_4817447_1 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000003976 231.0
PJD1_k127_4817447_2 SRP54-type protein, helical bundle domain K03110 - - 0.0000000000000000000000000000000000000000000000000000000000001451 214.0
PJD1_k127_4817701_0 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 430.0
PJD1_k127_4817701_1 ABC-type (Unclassified) transport system, ATPase component K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 362.0
PJD1_k127_4817701_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000002533 186.0
PJD1_k127_4817701_3 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000626 197.0
PJD1_k127_4817701_4 Prokaryotic N-terminal methylation motif - - - 0.000000000000000000000000000000000000000000000005533 183.0
PJD1_k127_4817701_6 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.00000000000000000000000000000001719 141.0
PJD1_k127_4817701_7 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.00000000000000000000000000000007794 138.0
PJD1_k127_4824815_0 Helix-hairpin-helix domain K04477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 346.0
PJD1_k127_4824815_1 cell redox homeostasis - - - 0.00000000000000000000000000000000000000000000000000000000000000000006778 248.0
PJD1_k127_4824815_2 Isochorismatase family K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000004752 176.0
PJD1_k127_4824815_3 - - - - 0.000002829 53.0
PJD1_k127_4834184_0 CoA binding domain K09181 - - 1.679e-263 837.0
PJD1_k127_4834184_1 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 389.0
PJD1_k127_4834184_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000006477 169.0
PJD1_k127_4843954_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 591.0
PJD1_k127_4843954_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 581.0
PJD1_k127_4843954_2 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009047 573.0
PJD1_k127_4843954_3 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 507.0
PJD1_k127_4843954_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 422.0
PJD1_k127_4843954_5 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000007292 236.0
PJD1_k127_4844501_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 450.0
PJD1_k127_4844501_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004951 303.0
PJD1_k127_4844501_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000001286 177.0
PJD1_k127_4848515_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 525.0
PJD1_k127_4848515_1 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000004452 165.0
PJD1_k127_4861640_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.377e-218 698.0
PJD1_k127_4861640_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 441.0
PJD1_k127_4861640_2 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002764 269.0
PJD1_k127_4861640_3 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.0000000000000000000000000000000000000000000000000000000000000000005852 243.0
PJD1_k127_4861640_4 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000001273 216.0
PJD1_k127_4861640_5 COG0655 Multimeric flavodoxin WrbA - - - 0.00000000000000000000000000000000000002384 160.0
PJD1_k127_4861640_6 Domain of unknown function (DUF4126) - - - 0.0000001108 54.0
PJD1_k127_4866697_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007591 479.0
PJD1_k127_4866697_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 459.0
PJD1_k127_4866697_2 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000002473 127.0
PJD1_k127_4866697_3 Belongs to the GST superfamily K11209 - - 0.00000000000000001736 89.0
PJD1_k127_4886812_0 AMP-binding enzyme C-terminal domain K00666,K20034 - 6.2.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 586.0
PJD1_k127_4886812_1 Enoyl-CoA hydratase isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000177 259.0
PJD1_k127_4888123_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 627.0
PJD1_k127_4888123_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 586.0
PJD1_k127_4888123_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008488 553.0
PJD1_k127_4888123_3 Universal stress protein family - - - 0.000000000000000000000000000000000000006865 149.0
PJD1_k127_4888123_4 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000000000000000000000000005986 138.0
PJD1_k127_4888123_5 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.0000000000000000000000000004383 117.0
PJD1_k127_4888123_6 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 0.000000000000003738 83.0
PJD1_k127_4900284_0 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 407.0
PJD1_k127_4900284_1 dioxygenase K15777 - - 0.00000000000000000000000002823 110.0
PJD1_k127_4900284_2 - - - - 0.000000000000000000135 102.0
PJD1_k127_4901577_0 RNA-metabolising metallo-beta-lactamase K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 524.0
PJD1_k127_4901577_1 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008864 249.0
PJD1_k127_4901577_2 Uncharacterised ACR, YagE family COG1723 - - - 0.00000000000000000000000000000000000000000000000000000000000000006137 248.0
PJD1_k127_4901577_3 FixH family K09926 - - 0.0000000000000000000000000000000000001486 146.0
PJD1_k127_4901577_4 - - - - 0.00000000000000000000000000001049 121.0
PJD1_k127_4901577_5 Cytochrome c - - - 0.00000008257 58.0
PJD1_k127_4906507_0 Succinylglutamate desuccinylase - - - 0.00000000000000000000000000158 114.0
PJD1_k127_4906507_1 helix_turn_helix, Lux Regulon - - - 0.000000002209 62.0
PJD1_k127_4906507_2 Domain of unknown function (DUF4124) - - - 0.0003034 50.0
PJD1_k127_4913101_0 Poly-beta-hydroxybutyrate K03821 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 539.0
PJD1_k127_4913101_1 Gentisate 1,2-dioxygenase K00450 - 1.13.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 453.0
PJD1_k127_4913101_2 Adenylate cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 332.0
PJD1_k127_4913101_3 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008553 310.0
PJD1_k127_4913101_4 esterase K01432 - 3.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000006189 278.0
PJD1_k127_4913101_5 Cysteine - - - 0.000000000000181 82.0
PJD1_k127_4918692_0 TIGRFAM ATP-dependent Clp protease ATP-binding subunit clpA K03694 - - 0.0 1194.0
PJD1_k127_4918692_1 Flavocytochrome c sulphide dehydrogenase, flavin-binding K05301,K17218 - 1.8.2.1,1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005693 508.0
PJD1_k127_4918692_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000006267 166.0
PJD1_k127_4918692_3 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000001158 163.0
PJD1_k127_4918692_4 Cold shock K03704 - - 0.00000000000000000000000000000000008819 133.0
PJD1_k127_4918692_5 Cytochrome c, class I - - - 0.0000000000000000000000001146 111.0
PJD1_k127_4942158_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008595 512.0
PJD1_k127_4942158_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003831 325.0
PJD1_k127_4942158_2 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000001856 235.0
PJD1_k127_4942158_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000004127 227.0
PJD1_k127_4942158_4 Conserved hypothetical protein 95 - - - 0.0000000000000000000000000000000000000000000000000008347 188.0
PJD1_k127_4944979_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 1.749e-194 631.0
PJD1_k127_4944979_1 N-Acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 514.0
PJD1_k127_4944979_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 464.0
PJD1_k127_4944979_3 dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 361.0
PJD1_k127_4944979_4 IPP transferase K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 347.0
PJD1_k127_4944979_5 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009545 265.0
PJD1_k127_4944979_6 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006929 257.0
PJD1_k127_4944979_7 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000000000000000000003767 169.0
PJD1_k127_4944979_8 protein conserved in bacteria - - - 0.000000000000000000148 91.0
PJD1_k127_4944979_9 Protein of Unknown function (DUF2784) - - - 0.00000003088 57.0
PJD1_k127_4957814_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 557.0
PJD1_k127_4957814_1 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008455 258.0
PJD1_k127_4957814_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000008118 97.0
PJD1_k127_4998534_0 Spermine/spermidine synthase domain K00797 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.5.1.16 1.127e-203 647.0
PJD1_k127_4998534_1 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 535.0
PJD1_k127_4998534_2 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 346.0
PJD1_k127_4998534_3 Domain of unknown function (DUF4178) - - - 0.0000000000000000000004423 99.0
PJD1_k127_4998534_4 Domain of Unknown Function (DUF350) - - - 0.0000000000000005404 82.0
PJD1_k127_4999410_0 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000113 284.0
PJD1_k127_4999410_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000001383 237.0
PJD1_k127_4999410_2 TIGRFAM CRISPR-associated protein - - - 0.0000000000000000000000000000000000000000000000000001102 194.0
PJD1_k127_4999410_3 part of a sulfur-relay system K11179 - - 0.0000000000000000000000000000000000007024 144.0
PJD1_k127_5015506_0 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 453.0
PJD1_k127_5015506_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 327.0
PJD1_k127_5015506_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000201 276.0
PJD1_k127_5015506_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000005407 235.0
PJD1_k127_5015506_4 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000003846 168.0
PJD1_k127_5022500_0 Protein of unknown function - - - 2.052e-273 883.0
PJD1_k127_5022500_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 9.271e-273 863.0
PJD1_k127_5022500_2 Dienelactone hydrolase family - - - 0.00000000000000000000000000000003218 134.0
PJD1_k127_5048645_0 PFAM 5-nucleotidase K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 406.0
PJD1_k127_5048645_1 AsmA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 391.0
PJD1_k127_5057236_0 FAD dependent oxidoreductase K00244,K13796 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 505.0
PJD1_k127_5057236_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004792 306.0
PJD1_k127_5057236_2 ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003241 286.0
PJD1_k127_5057236_3 (ABC) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000235 263.0
PJD1_k127_5057236_4 Acetoacetate decarboxylase (ADC) - - - 0.0000000000000000000000000000016 132.0
PJD1_k127_5057236_5 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01464 - 3.5.2.2 0.000000000000000000004043 94.0
PJD1_k127_5086341_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 480.0
PJD1_k127_5086341_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 400.0
PJD1_k127_5086341_2 AAA domain, putative AbiEii toxin, Type IV TA system K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000421 387.0
PJD1_k127_5086341_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 362.0
PJD1_k127_5086341_4 AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000001215 135.0
PJD1_k127_50963_0 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004592 341.0
PJD1_k127_50963_1 Histidine kinase K05962 - 2.7.13.1 0.0000000000000000000000000000000000000000000000000000000000003926 229.0
PJD1_k127_5100986_0 Respiratory nitrate reductase alpha N-terminal K00370 - 1.7.5.1 0.0 1029.0
PJD1_k127_5105826_0 Belongs to the LDH2 MDH2 oxidoreductase family K13574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 417.0
PJD1_k127_5105826_1 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 314.0
PJD1_k127_5105826_2 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002335 269.0
PJD1_k127_5105826_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000002326 210.0
PJD1_k127_5105826_4 TPM domain K06872 - - 0.000000000000000004994 91.0
PJD1_k127_5141720_0 transport system fused permease components - - - 4.86e-231 731.0
PJD1_k127_5144389_0 Histidine kinase K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 591.0
PJD1_k127_5144389_1 - - - - 0.0000000000000000000000000000000000000000000000000222 188.0
PJD1_k127_5144389_2 Cytochrome c - - - 0.000000000000000000000000000004147 137.0
PJD1_k127_5144389_3 response regulator K02481 - - 0.00000000000000000000468 110.0
PJD1_k127_5197170_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006253 451.0
PJD1_k127_5197170_1 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000002224 182.0
PJD1_k127_5197170_2 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.00000000000000000000000000000000000000000000002811 171.0
PJD1_k127_5197170_3 Lipopolysaccharide assembly protein A domain K08992 - - 0.0000000000000000004368 90.0
PJD1_k127_5200144_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 1.655e-195 615.0
PJD1_k127_5200144_1 Belongs to the enoyl-CoA hydratase isomerase family K07516 - 1.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000007096 262.0
PJD1_k127_5200144_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000948 64.0
PJD1_k127_5219075_0 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000941 485.0
PJD1_k127_5219075_1 Beta-lactamase K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 347.0
PJD1_k127_5219075_2 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 316.0
PJD1_k127_5219075_3 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004814 271.0
PJD1_k127_5219075_4 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000001403 267.0
PJD1_k127_5219075_5 EamA-like transporter family - - - 0.00000000000000000000000000000000006782 139.0
PJD1_k127_5219075_6 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000005902 136.0
PJD1_k127_5219075_7 SWI complex, BAF60b domains - - - 0.00000000000000000000000000000001293 128.0
PJD1_k127_52341_0 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 360.0
PJD1_k127_52341_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 351.0
PJD1_k127_5266078_0 Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA K00253 - 1.3.8.4 1.61e-197 621.0
PJD1_k127_5266078_1 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002894 290.0
PJD1_k127_5266078_2 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000002387 282.0
PJD1_k127_5266078_3 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000163 255.0
PJD1_k127_5266078_4 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000000000000000000003458 193.0
PJD1_k127_5266078_5 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000008636 170.0
PJD1_k127_5266078_6 MerR, DNA binding - - - 0.0000000000000000000000000000000001654 137.0
PJD1_k127_5356625_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 601.0
PJD1_k127_5356625_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 456.0
PJD1_k127_5356625_10 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000002567 124.0
PJD1_k127_5356625_11 Mrr N-terminal domain - - - 0.0007838 48.0
PJD1_k127_5356625_2 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 404.0
PJD1_k127_5356625_3 Belongs to the RNA methyltransferase TrmD family K00554 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 326.0
PJD1_k127_5356625_4 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001215 276.0
PJD1_k127_5356625_5 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000316 213.0
PJD1_k127_5356625_6 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000003094 194.0
PJD1_k127_5356625_7 6,7-dimethyl-8-ribityllumazine synthase K00794 - 2.5.1.78 0.00000000000000000000000000000000000000001728 156.0
PJD1_k127_5356625_8 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000001409 149.0
PJD1_k127_5356625_9 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000005238 134.0
PJD1_k127_5550208_0 AcrB/AcrD/AcrF family - - - 0.0 1211.0
PJD1_k127_5550208_1 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 576.0
PJD1_k127_5550208_10 Molybdenum cofactor biosynthesis protein K03831 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002385 280.0
PJD1_k127_5550208_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000945 262.0
PJD1_k127_5550208_12 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000174 234.0
PJD1_k127_5550208_13 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000005492 242.0
PJD1_k127_5550208_14 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000003853 201.0
PJD1_k127_5550208_15 Belongs to the UPF0311 family - - - 0.0000000000000000000000000000000000000000000003599 179.0
PJD1_k127_5550208_16 Belongs to the UPF0307 family K09889 - - 0.0000000000000000000000000000000000007483 144.0
PJD1_k127_5550208_17 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000005642 113.0
PJD1_k127_5550208_2 With GlrK is part of a two-component signal transduction system regulating glmY K07715 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 549.0
PJD1_k127_5550208_3 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008713 529.0
PJD1_k127_5550208_4 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009601 433.0
PJD1_k127_5550208_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 387.0
PJD1_k127_5550208_6 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 358.0
PJD1_k127_5550208_7 Histidine kinase K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 344.0
PJD1_k127_5550208_8 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 293.0
PJD1_k127_5550208_9 Serine hydrolase (FSH1) K06999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 286.0
PJD1_k127_5558042_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 2.773e-290 912.0
PJD1_k127_5558042_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 2.98e-255 798.0
PJD1_k127_5558042_10 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000000000000000000000000000000000000000000003721 198.0
PJD1_k127_5558042_11 Belongs to the skp family K06142 - - 0.000000000000000000000000000000000000000000000002705 179.0
PJD1_k127_5558042_12 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000004472 77.0
PJD1_k127_5558042_2 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 486.0
PJD1_k127_5558042_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006609 456.0
PJD1_k127_5558042_4 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 354.0
PJD1_k127_5558042_5 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006969 353.0
PJD1_k127_5558042_6 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003144 346.0
PJD1_k127_5558042_7 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 316.0
PJD1_k127_5558042_8 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000001157 236.0
PJD1_k127_5558042_9 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000008037 221.0
PJD1_k127_5558938_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 433.0
PJD1_k127_5558938_1 (Lipo)protein K07287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006073 351.0
PJD1_k127_5558938_2 tellurite resistance protein - - - 0.000000000000000000000000000000000001988 139.0
PJD1_k127_5567400_0 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001444 280.0
PJD1_k127_5567400_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000004841 220.0
PJD1_k127_5567400_2 Protein of unknown function (DUF3025) - - - 0.00000000000000000000000000000000000000000007288 176.0
PJD1_k127_5568346_0 D-galactarate dehydratase / Altronate hydrolase, C terminus K01685 - 4.2.1.7 1.242e-223 703.0
PJD1_k127_5568346_1 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 1.106e-202 649.0
PJD1_k127_5568346_10 Domain of unknown function (DUF4189) - - - 0.0000000385 66.0
PJD1_k127_5568346_2 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004222 480.0
PJD1_k127_5568346_3 Belongs to the PdxA family K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 469.0
PJD1_k127_5568346_4 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000001212 234.0
PJD1_k127_5568346_5 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000002556 204.0
PJD1_k127_5568346_6 Tripartite ATP-independent periplasmic transporter - - - 0.00000000000000000000000000000000000000000000000000007088 194.0
PJD1_k127_5568346_7 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000000000000000002525 170.0
PJD1_k127_5568346_8 Putative nucleotide-binding of sugar-metabolising enzyme K22129 - 2.7.1.219,2.7.1.220 0.00000000000000000000000000000000000000002513 166.0
PJD1_k127_5568346_9 Belongs to the IlvD Edd family K13875 - 4.2.1.25 0.000000000000000000117 88.0
PJD1_k127_5580048_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 2.817e-302 945.0
PJD1_k127_5580048_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 506.0
PJD1_k127_5580048_2 Peptidogalycan biosysnthesis/recognition K09919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 309.0
PJD1_k127_5580048_3 Transcriptional regulator crp fnr family K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002754 262.0
PJD1_k127_5580048_4 AAA C-terminal domain K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001284 256.0
PJD1_k127_5580048_5 Nitrogen regulatory protein P-II K04751 - - 0.00000000000000000000000000000000000000000000000000000006148 197.0
PJD1_k127_5580048_6 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000000000000000000000000000000009668 192.0
PJD1_k127_5580048_7 Small MutS-related domain - - - 0.000000000000000000000000000000000000000000000001437 183.0
PJD1_k127_5599009_0 AAA domain (dynein-related subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 445.0
PJD1_k127_5599009_1 VWA domain containing CoxE-like protein K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 426.0
PJD1_k127_5599009_2 Malonyl-CoA decarboxylase N-terminal domain K01578 - 4.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 428.0
PJD1_k127_5599009_3 carbon monoxide dehydrogenase subunit G K09386 - - 0.00000000000000000000000000000125 124.0
PJD1_k127_5599133_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003865 528.0
PJD1_k127_5599133_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0000226,GO:0001817,GO:0001819,GO:0001906,GO:0001907,GO:0002376,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004365,GO:0004857,GO:0004866,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005811,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006417,GO:0006464,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007017,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009607,GO:0009620,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009987,GO:0010033,GO:0010466,GO:0010468,GO:0010506,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010941,GO:0010942,GO:0010951,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016241,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016769,GO:0016903,GO:0017014,GO:0017144,GO:0017148,GO:0018119,GO:0018130,GO:0018193,GO:0018198,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019730,GO:0019752,GO:0019828,GO:0019904,GO:0030162,GO:0030234,GO:0030414,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031341,GO:0031343,GO:0031640,GO:0031647,GO:0031965,GO:0031967,GO:0031975,GO:0032268,GO:0032269,GO:0032787,GO:0032879,GO:0032880,GO:0032991,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035605,GO:0035606,GO:0035821,GO:0036094,GO:0036211,GO:0042221,GO:0042802,GO:0042866,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043436,GO:0043891,GO:0043900,GO:0043902,GO:0043903,GO:0044003,GO:0044004,GO:0044068,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044364,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044531,GO:0044532,GO:0044533,GO:0045087,GO:0045861,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050662,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050832,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051287,GO:0051336,GO:0051346,GO:0051402,GO:0051701,GO:0051702,GO:0051704,GO:0051707,GO:0051709,GO:0051712,GO:0051716,GO:0051817,GO:0051818,GO:0051851,GO:0051852,GO:0051873,GO:0051883,GO:0052040,GO:0052042,GO:0052248,GO:0052330,GO:0052433,GO:0052501,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061134,GO:0061135,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0061844,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070887,GO:0070997,GO:0071310,GO:0071345,GO:0071346,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090407,GO:0097159,GO:0097452,GO:0097718,GO:0098542,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:1990904,GO:2000112,GO:2000113 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 481.0
PJD1_k127_5599133_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000004894 94.0
PJD1_k127_5608327_0 ABC transporter, substrate-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 571.0
PJD1_k127_5608327_1 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 477.0
PJD1_k127_5608327_10 Ferredoxin, 2Fe-2S type, ISC system K04755 - - 0.00000000000000000000000000000000000000000002248 163.0
PJD1_k127_5608327_11 FeS assembly protein IscX - - - 0.000000000000000000000000001837 118.0
PJD1_k127_5608327_2 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 461.0
PJD1_k127_5608327_3 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008577 430.0
PJD1_k127_5608327_4 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 422.0
PJD1_k127_5608327_5 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004426 390.0
PJD1_k127_5608327_6 type VI secretion protein K11891 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 384.0
PJD1_k127_5608327_7 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000003507 230.0
PJD1_k127_5608327_8 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.0000000000000000000000000000000000000000000000000000000012 208.0
PJD1_k127_5608327_9 TIGRFAM type IV VI secretion system protein, DotU family K11892 - - 0.0000000000000000000000000000000000000000000000001285 197.0
PJD1_k127_5609701_0 heptosyltransferase II K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 336.0
PJD1_k127_5609701_1 alpha/beta hydrolase fold K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006057 334.0
PJD1_k127_5609701_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000002411 187.0
PJD1_k127_5609701_3 SnoaL-like domain - - - 0.00000000000000000000000000000000000000001857 158.0
PJD1_k127_5609701_4 Zinc-finger domain - - - 0.0000000000000000000007719 102.0
PJD1_k127_5614993_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1019.0
PJD1_k127_5614993_1 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000004935 183.0
PJD1_k127_5614993_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000483 165.0
PJD1_k127_5629802_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0 1101.0
PJD1_k127_5629802_1 Putative modulator of DNA gyrase K03568 - - 2.341e-225 707.0
PJD1_k127_5629802_10 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.0000000000001665 77.0
PJD1_k127_5629802_2 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 363.0
PJD1_k127_5629802_3 COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 332.0
PJD1_k127_5629802_4 COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01040 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000005898 267.0
PJD1_k127_5629802_5 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000001422 245.0
PJD1_k127_5629802_6 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000004012 165.0
PJD1_k127_5629802_7 cytochrome c K17223 - - 0.000000000000000000000000000000000000000003578 158.0
PJD1_k127_5629802_8 Protein of unknown function - - - 0.000000000000000000000000000000000000001507 151.0
PJD1_k127_5629802_9 Sulphur oxidation protein SoxZ K17227 - - 0.000000000000000000000000000000000002751 147.0
PJD1_k127_5643127_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003983 327.0
PJD1_k127_5643127_1 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 340.0
PJD1_k127_5643127_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 311.0
PJD1_k127_5643127_3 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.000000000000000000000000002159 113.0
PJD1_k127_5644648_0 Oligopeptidase K01414 - 3.4.24.70 2.768e-282 878.0
PJD1_k127_5644648_1 Belongs to the malate synthase family K01638 - 2.3.3.9 2.189e-233 731.0
PJD1_k127_5644648_2 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 389.0
PJD1_k127_5644648_3 - - - - 0.0000000000000004619 82.0
PJD1_k127_5703716_0 ABC transporter transmembrane region K02021 - - 1.583e-284 902.0
PJD1_k127_5703716_1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032 - - 1.923e-243 779.0
PJD1_k127_5703716_10 - - - - 0.00000000000000000000000000002938 130.0
PJD1_k127_5703716_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 2.133e-229 757.0
PJD1_k127_5703716_3 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 598.0
PJD1_k127_5703716_4 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 471.0
PJD1_k127_5703716_5 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 359.0
PJD1_k127_5703716_6 Glycosyltransferase family 28 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009934 292.0
PJD1_k127_5703716_7 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005214 263.0
PJD1_k127_5703716_8 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000001171 195.0
PJD1_k127_5703716_9 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000003545 127.0
PJD1_k127_5729272_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.232e-272 858.0
PJD1_k127_5751840_0 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 417.0
PJD1_k127_5751840_1 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.00000000000000000000000000000000000000000000000000000005561 200.0
PJD1_k127_5751840_2 transporter antisigma-factor antagonist STAS K07122 - - 0.0000000000001978 80.0
PJD1_k127_5751840_3 Transport permease protein K01992 - - 0.00000000007239 73.0
PJD1_k127_5766433_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 561.0
PJD1_k127_5766433_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 398.0
PJD1_k127_5766433_2 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 351.0
PJD1_k127_5766433_3 dehydrogenase, E1 component K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006175 305.0
PJD1_k127_5766433_4 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009479 326.0
PJD1_k127_5766433_5 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001428 245.0
PJD1_k127_5766433_6 PFAM glutaredoxin - - - 0.0000000000000001585 80.0
PJD1_k127_5782398_0 FAD binding domain K20940 - 1.14.13.218 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 472.0
PJD1_k127_5782398_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 301.0
PJD1_k127_5782820_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006133 313.0
PJD1_k127_5782820_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000002686 153.0
PJD1_k127_5828148_0 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 529.0
PJD1_k127_5828148_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 419.0
PJD1_k127_5828148_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007335 392.0
PJD1_k127_5828148_3 Pentapeptide repeats (9 copies) - - - 0.0000002176 59.0
PJD1_k127_5860413_0 Protein of unknown function (DUF808) K09781 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 416.0
PJD1_k127_5860413_1 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005427 272.0
PJD1_k127_5860413_2 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000236 236.0
PJD1_k127_5860413_3 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000003509 87.0
PJD1_k127_5867064_0 Mediates influx of magnesium ions K03284,K16074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 441.0
PJD1_k127_5867064_1 PFAM NUDIX hydrolase - - - 0.0000000000000000000000000000000000000000000000002718 186.0
PJD1_k127_5867064_2 PFAM aminotransferase, class I - - - 0.00000000000000000000000003328 114.0
PJD1_k127_5867064_3 Transcriptional regulator - - - 0.0000000000000005264 84.0
PJD1_k127_5867064_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00006381 46.0
PJD1_k127_5879209_0 Biotin-lipoyl like K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 434.0
PJD1_k127_5879209_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000297 243.0
PJD1_k127_5879209_2 ABC-type multidrug transport system, ATPase component K13926 - - 0.000000000000000002814 85.0
PJD1_k127_5883603_0 Beta propeller domain - - - 8.788e-224 705.0
PJD1_k127_5885160_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 5.068e-260 816.0
PJD1_k127_5885160_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000004619 57.0
PJD1_k127_5907688_0 Uncharacterised ArCR, COG2043 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008099 413.0
PJD1_k127_5907688_1 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001531 260.0
PJD1_k127_5907688_2 Belongs to the binding-protein-dependent transport system permease family - - - 0.000000000000000000000000000000000000000000000000000000000000003288 227.0
PJD1_k127_5907688_3 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000258 213.0
PJD1_k127_5907688_4 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000004353 178.0
PJD1_k127_5941234_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 5.013e-307 953.0
PJD1_k127_5941234_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0000226,GO:0001817,GO:0001819,GO:0001906,GO:0001907,GO:0002376,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004365,GO:0004857,GO:0004866,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005811,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006417,GO:0006464,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007017,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009607,GO:0009620,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009987,GO:0010033,GO:0010466,GO:0010468,GO:0010506,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010941,GO:0010942,GO:0010951,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016241,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016769,GO:0016903,GO:0017014,GO:0017144,GO:0017148,GO:0018119,GO:0018130,GO:0018193,GO:0018198,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019730,GO:0019752,GO:0019828,GO:0019904,GO:0030162,GO:0030234,GO:0030414,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031341,GO:0031343,GO:0031640,GO:0031647,GO:0031965,GO:0031967,GO:0031975,GO:0032268,GO:0032269,GO:0032787,GO:0032879,GO:0032880,GO:0032991,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035605,GO:0035606,GO:0035821,GO:0036094,GO:0036211,GO:0042221,GO:0042802,GO:0042866,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043436,GO:0043891,GO:0043900,GO:0043902,GO:0043903,GO:0044003,GO:0044004,GO:0044068,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044364,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044531,GO:0044532,GO:0044533,GO:0045087,GO:0045861,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050662,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050832,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051287,GO:0051336,GO:0051346,GO:0051402,GO:0051701,GO:0051702,GO:0051704,GO:0051707,GO:0051709,GO:0051712,GO:0051716,GO:0051817,GO:0051818,GO:0051851,GO:0051852,GO:0051873,GO:0051883,GO:0052040,GO:0052042,GO:0052248,GO:0052330,GO:0052433,GO:0052501,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061134,GO:0061135,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0061844,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070887,GO:0070997,GO:0071310,GO:0071345,GO:0071346,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090407,GO:0097159,GO:0097452,GO:0097718,GO:0098542,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:1990904,GO:2000112,GO:2000113 1.2.1.12 0.0000000000000000000000000006545 122.0
PJD1_k127_5941287_0 CoA-binding protein K06929 - - 0.0000000000000000000000000000000000000000000000000000000000000000008828 231.0
PJD1_k127_5941287_1 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000001866 140.0
PJD1_k127_5942509_0 ribosomal rna small subunit methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007817 514.0
PJD1_k127_5942509_1 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000001864 178.0
PJD1_k127_5975777_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 451.0
PJD1_k127_5975777_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 319.0
PJD1_k127_5975777_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000685 237.0
PJD1_k127_5975819_0 Phosphoglucose isomerase K01810 - 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008084 391.0
PJD1_k127_5975819_1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000001036 233.0
PJD1_k127_5975819_2 Evidence 4 Homologs of previously reported genes of - - - 0.000000000001063 71.0
PJD1_k127_60673_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 560.0
PJD1_k127_60673_1 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 355.0
PJD1_k127_60673_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006869 321.0
PJD1_k127_60673_3 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000001414 239.0
PJD1_k127_60673_4 Phosphoglycolate phosphatase K22292 - 3.1.3.105 0.0000000000000000000000000000000000000000000000000000002937 198.0
PJD1_k127_6068202_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 429.0
PJD1_k127_6068202_1 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005622 289.0
PJD1_k127_6068202_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000002283 78.0
PJD1_k127_6339432_0 Protein of unknown function (DUF1223) - - - 0.0000000000000000000000000000000000000000000000000000000001843 211.0
PJD1_k127_6339432_1 DNA-sulfur modification-associated - - - 0.000002877 59.0
PJD1_k127_6339557_0 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 2.079e-216 688.0
PJD1_k127_6339557_1 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 497.0
PJD1_k127_6339557_2 Aminocarboxymuconate-semialdehyde decarboxylase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004964 295.0
PJD1_k127_6339557_3 glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000005141 235.0
PJD1_k127_6339557_4 Flavodoxin - - - 0.000000000000000000000000000000000000000000001843 169.0
PJD1_k127_6339557_5 Domain of unknown function (DUF1840) - - - 0.000000000000000000000000002472 115.0
PJD1_k127_6342107_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 2.21e-298 925.0
PJD1_k127_6342107_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 2.204e-231 722.0
PJD1_k127_6342107_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 300.0
PJD1_k127_6342107_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000003672 139.0
PJD1_k127_6342107_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000005088 125.0
PJD1_k127_6343449_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 8.971e-307 949.0
PJD1_k127_6343449_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 596.0
PJD1_k127_6343449_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 364.0
PJD1_k127_6343449_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 323.0
PJD1_k127_6343449_4 MucB/RseB C-terminal domain K03598 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001141 270.0
PJD1_k127_6343449_5 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.0000000000000000000003567 105.0
PJD1_k127_6348871_0 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003108 273.0
PJD1_k127_6348871_1 integral membrane protein K02221 - - 0.000000000000000000000000000000000003605 154.0
PJD1_k127_6351770_0 Exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007327 601.0
PJD1_k127_6351770_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 285.0
PJD1_k127_6351770_2 - - - - 0.00000000000000000000000000000000000000000000000004665 180.0
PJD1_k127_6351770_3 Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000009474 164.0
PJD1_k127_6351770_4 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.0000000000000000000000000000000000000000001903 168.0
PJD1_k127_6352829_0 Binding-protein-dependent transport system inner membrane component K02033,K15585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 400.0
PJD1_k127_6352829_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009808 340.0
PJD1_k127_6352829_2 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000007534 134.0
PJD1_k127_6356255_0 Ammonium Transporter K03320 - - 3.498e-225 710.0
PJD1_k127_6356255_1 Belongs to the P(II) protein family K04752 - - 0.00000000000000000000000000000000000000000000000001373 180.0
PJD1_k127_6356255_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000003749 121.0
PJD1_k127_6356255_3 PFAM AMP-dependent synthetase and ligase K04110 - 6.2.1.25 0.00000000000000003858 86.0
PJD1_k127_6366456_0 cytochrome p450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 396.0
PJD1_k127_6366456_1 Iron-containing redox enzyme - - - 0.000000000000004509 76.0
PJD1_k127_6366456_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K10715 - 2.7.13.3 0.0000001793 57.0
PJD1_k127_6370754_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 544.0
PJD1_k127_6370754_1 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 312.0
PJD1_k127_6370754_2 Thioredoxin - - - 0.000000000000000000000000000000000000000000003188 169.0
PJD1_k127_6370754_3 cell division protein - - - 0.00000000000000000000000000000000000000000005257 169.0
PJD1_k127_6384351_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00122 - 1.17.1.9 4.84e-257 799.0
PJD1_k127_6384351_1 TIGRFAM formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000856 438.0
PJD1_k127_6387617_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 4.14e-197 620.0
PJD1_k127_6387617_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 492.0
PJD1_k127_6387617_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008105 428.0
PJD1_k127_6387617_3 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.0000000000000000000000000000000000000000000000004858 183.0
PJD1_k127_6387617_4 Protein of unknown function (DUF721) - - - 0.00000002188 61.0
PJD1_k127_6387645_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 6.199e-316 977.0
PJD1_k127_6387645_1 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 2.478e-239 747.0
PJD1_k127_6387645_2 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000002562 195.0
PJD1_k127_6387645_3 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000001738 166.0
PJD1_k127_6388438_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 1.948e-197 626.0
PJD1_k127_6388438_1 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 383.0
PJD1_k127_6388438_2 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001483 270.0
PJD1_k127_6388438_3 Molybdopterin biosynthesis protein MoeB K21029 - 2.7.7.80 0.0000000000000001084 79.0
PJD1_k127_6391295_0 Dihydrodipicolinate synthetase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 485.0
PJD1_k127_6391295_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 381.0
PJD1_k127_6391295_2 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 352.0
PJD1_k127_6391295_3 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008281 314.0
PJD1_k127_6391295_4 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.00000000004885 70.0
PJD1_k127_6391342_0 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003397 455.0
PJD1_k127_6391342_1 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000001253 154.0
PJD1_k127_6391342_2 nadph quinone oxidoreductase K00344 - 1.6.5.5 0.0000000000000000000000000000000004442 132.0
PJD1_k127_6397186_0 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000001639 246.0
PJD1_k127_6397186_1 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000009654 232.0
PJD1_k127_6397186_2 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000003248 90.0
PJD1_k127_6397701_0 PFAM NADH dehydrogenase (ubiquinone) 30 kDa subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005521 274.0
PJD1_k127_6397701_1 Catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000001097 268.0
PJD1_k127_6397701_2 NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002979 252.0
PJD1_k127_6397701_3 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.000000000000000000001751 97.0
PJD1_k127_6397701_4 FAD binding domain K09828 - 1.3.1.72 0.00000000000001345 85.0
PJD1_k127_6397987_0 Amidohydrolase family K01464 - 3.5.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 542.0
PJD1_k127_6397987_1 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007809 413.0
PJD1_k127_6397987_2 Asp/Glu/Hydantoin racemase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000883 320.0
PJD1_k127_6397987_3 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000006367 194.0
PJD1_k127_6397987_4 belongs to the bacterial solute-binding protein 3 family K02030 - - 0.0002845 49.0
PJD1_k127_6401571_0 Belongs to the helicase family. UvrD subfamily K03582 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000149 197.0
PJD1_k127_6401571_1 Redoxin - - - 0.000000000000000000000001518 105.0
PJD1_k127_6401571_2 Protein of unknown function (DUF433) - - - 0.0000000000000000000002286 98.0
PJD1_k127_6401571_3 - - - - 0.00000000000002618 78.0
PJD1_k127_6408178_0 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008205 588.0
PJD1_k127_6408178_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009495 507.0
PJD1_k127_6408178_2 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006436 290.0
PJD1_k127_6408178_3 COG2755 Lysophospholipase L1 and related esterases K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000001692 218.0
PJD1_k127_6408178_4 Methyl-transferase K18912 - 1.14.99.50 0.00000000000000000000001877 99.0
PJD1_k127_6408754_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 4.637e-200 627.0
PJD1_k127_6408754_1 SMART PAS domain containing protein - - - 0.0000000000000000000000000000000000463 149.0
PJD1_k127_6408754_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.0000000000000000962 80.0
PJD1_k127_6408754_3 Diguanylate cyclase - - - 0.0000000000000004005 91.0
PJD1_k127_6418436_0 Periplasmic binding protein K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008105 521.0
PJD1_k127_6418436_1 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 406.0
PJD1_k127_6418436_2 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008633 363.0
PJD1_k127_6418436_3 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002169 257.0
PJD1_k127_6418436_4 Branched-chain amino acid ATP-binding cassette transporter - - - 0.000000000000000000000000000000000001535 154.0
PJD1_k127_6426234_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 454.0
PJD1_k127_6426234_1 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000007656 133.0
PJD1_k127_6426234_2 - - - - 0.000000000000000000000000000002108 124.0
PJD1_k127_6426234_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657,K07662 - - 0.00000000000000000000000003123 113.0
PJD1_k127_6436197_0 GTP-binding protein K06207 - - 1.831e-314 970.0
PJD1_k127_6436197_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007801 483.0
PJD1_k127_6436197_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003077 310.0
PJD1_k127_6436197_3 4,5-dihydroxyphthalate decarboxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 295.0
PJD1_k127_6436197_4 serine threonine protein kinase K08282 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008208 301.0
PJD1_k127_6436197_5 Bacterial protein of unknown function (DUF883) - - - 0.00000000000000000002221 94.0
PJD1_k127_6436197_6 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000001381 57.0
PJD1_k127_6438363_0 penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 9.905e-251 787.0
PJD1_k127_6438363_1 Belongs to the frataxin K06202 - - 0.0000000000000000002814 88.0
PJD1_k127_6450205_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 451.0
PJD1_k127_6450205_1 LysR substrate binding domain K03717 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005976 419.0
PJD1_k127_6450205_2 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000001981 216.0
PJD1_k127_6450205_3 Hemerythrin HHE cation binding domain - - - 0.000000000000000000001207 102.0
PJD1_k127_6450205_4 Belongs to the universal stress protein A family - - - 0.000000000000003831 83.0
PJD1_k127_6450205_5 Integral membrane protein TerC family - - - 0.000000000006256 69.0
PJD1_k127_6456809_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 5.553e-214 674.0
PJD1_k127_6456809_1 PhoH-like phosphate starvation-inducible protein K06217 - - 0.0000000000000000000000000000000000000000000000003968 190.0
PJD1_k127_6468352_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1456.0
PJD1_k127_6468352_1 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 410.0
PJD1_k127_6468352_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000000006071 237.0
PJD1_k127_6468352_3 mechanosensitive ion channel activity K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.0000000000000000000000000000000000000000004918 160.0
PJD1_k127_6468352_4 TM2 domain - - - 0.000000000000000000000000000000000006651 139.0
PJD1_k127_6468352_5 Ankyrin repeat - - - 0.000000004033 67.0
PJD1_k127_6468352_6 YHS domain - - - 0.000002373 61.0
PJD1_k127_6471466_0 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 441.0
PJD1_k127_6471466_1 TonB C terminal K03646 - - 0.000000000000000000000000000000000000000000000007241 183.0
PJD1_k127_6471466_2 MotA TolQ ExbB proton channel family K03561,K03562 - - 0.000000000000000000000000000000000000000000001468 165.0
PJD1_k127_6471466_3 Biopolymer transport protein ExbD TolR K03560 - - 0.00000000000000000000000000001584 125.0
PJD1_k127_6476927_0 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041 374.0
PJD1_k127_6476927_1 2-hydroxychromene-2-carboxylate isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000002131 217.0
PJD1_k127_6476927_2 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000704 209.0
PJD1_k127_6476927_3 4-Hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 0.00000000000000000174 85.0
PJD1_k127_6490008_0 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006127 306.0
PJD1_k127_6490008_1 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008906 291.0
PJD1_k127_6490008_2 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000000000000000000000000001229 160.0
PJD1_k127_6490008_3 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides K09020 - 3.5.1.110 0.000000000000000000001023 102.0
PJD1_k127_6492166_0 peptidase S1 and S6, chymotrypsin Hap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 320.0
PJD1_k127_6492166_1 associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 302.0
PJD1_k127_6492166_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.000000002436 59.0
PJD1_k127_649440_0 PFAM D-galactarate dehydratase Altronate hydrolase domain protein K16846 - 4.4.1.24 8.594e-211 664.0
PJD1_k127_649440_1 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 407.0
PJD1_k127_649440_2 SAF K16845 - 4.4.1.24 0.0000000000000000000000000000000000000000005559 158.0
PJD1_k127_649440_3 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein - - - 0.0000000000000000000000009062 115.0
PJD1_k127_6513009_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 404.0
PJD1_k127_6513009_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005243 393.0
PJD1_k127_6513009_10 Psort location Cytoplasmic, score K01523 - 3.6.1.31 0.00000000000000000000000000000007913 135.0
PJD1_k127_6513009_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.00000000000000000000000000000567 123.0
PJD1_k127_6513009_12 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000000001842 101.0
PJD1_k127_6513009_2 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006504 381.0
PJD1_k127_6513009_3 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 346.0
PJD1_k127_6513009_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 352.0
PJD1_k127_6513009_5 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 331.0
PJD1_k127_6513009_6 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 295.0
PJD1_k127_6513009_7 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.000000000000000000000000000000000000000000000000000009626 201.0
PJD1_k127_6513009_8 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.0000000000000000000000000000000000000000000667 168.0
PJD1_k127_6513009_9 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000004898 152.0
PJD1_k127_6523536_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family K00219 - 1.3.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008488 595.0
PJD1_k127_6523536_1 AlkA N-terminal domain K13529 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005318 318.0
PJD1_k127_6527429_0 Tryptophan halogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 478.0
PJD1_k127_6527429_1 MMPL family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004562 466.0
PJD1_k127_6527429_10 AMP-binding enzyme - - - 0.0000000000000000000002635 102.0
PJD1_k127_6527429_2 Beta-ketoacyl synthase, N-terminal domain K00647 - 2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007319 454.0
PJD1_k127_6527429_3 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 321.0
PJD1_k127_6527429_4 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007437 286.0
PJD1_k127_6527429_5 Bacterial lipid A biosynthesis acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008467 264.0
PJD1_k127_6527429_6 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000004353 197.0
PJD1_k127_6527429_7 Beta-ketoacyl synthase, N-terminal domain - - - 0.00000000000000000000000000000000000004188 158.0
PJD1_k127_6527429_8 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000009605 131.0
PJD1_k127_6527429_9 dehydratase - - - 0.00000000000000000000000000003634 124.0
PJD1_k127_6559227_0 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 477.0
PJD1_k127_6559227_1 Domain of unknown function (DUF4124) - - - 0.0000000000000000000000000000005352 129.0
PJD1_k127_6559227_2 HD domain K01139 - 2.7.6.5,3.1.7.2 0.0000000108 56.0
PJD1_k127_6568666_0 PFAM luciferase family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006698 394.0
PJD1_k127_6568666_1 KR domain K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000002477 219.0
PJD1_k127_6568666_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000001374 82.0
PJD1_k127_6576760_0 Single-stranded-DNA-specific exonuclease RecJ K07462 - - 7.915e-206 655.0
PJD1_k127_6576760_1 Protein conserved in bacteria - - - 0.0000000006291 61.0
PJD1_k127_6584608_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 546.0
PJD1_k127_6584608_1 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004788 455.0
PJD1_k127_6584608_2 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 352.0
PJD1_k127_6584608_3 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 318.0
PJD1_k127_6584608_4 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000003162 98.0
PJD1_k127_6585035_0 dehydrogenase, E1 component K00164 - 1.2.4.2 0.0 1036.0
PJD1_k127_6585035_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000001103 79.0
PJD1_k127_6586641_0 Belongs to the glutamate synthase family - - - 4.344e-246 767.0
PJD1_k127_6586641_1 Bacterial protein of unknown function (DUF899) K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000006294 224.0
PJD1_k127_6594909_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 469.0
PJD1_k127_6594909_1 Queuosine biosynthesis protein K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 406.0
PJD1_k127_6594909_2 HD domain K13815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007949 408.0
PJD1_k127_6595181_0 HI0933-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 490.0
PJD1_k127_6595181_1 FMN-dependent dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 427.0
PJD1_k127_6595181_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 339.0
PJD1_k127_6595181_3 oxidoreductase gamma subunit K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000003204 187.0
PJD1_k127_6595181_4 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000005856 136.0
PJD1_k127_6595181_5 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.00000000003666 63.0
PJD1_k127_6601668_0 PFAM fumarate lyase K01756,K01857 - 4.3.2.2,5.5.1.2 2.887e-215 679.0
PJD1_k127_6601668_1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 310.0
PJD1_k127_6601668_2 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000002129 119.0
PJD1_k127_6601668_3 Ribonuclease B OB domain K12573 - - 0.0000000000000000000000004519 106.0
PJD1_k127_6602650_0 DNA polymerase K02337 - 2.7.7.7 0.0 1117.0
PJD1_k127_6602650_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008947 387.0
PJD1_k127_6602650_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001418 276.0
PJD1_k127_6621887_0 Transglycosylase SLT domain K08309 - - 1.668e-249 776.0
PJD1_k127_6621887_1 NmrA-like family - - - 0.00000000000000000000000000000000000000608 156.0
PJD1_k127_6629676_0 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 376.0
PJD1_k127_6752836_0 phosphate transport system K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000047 488.0
PJD1_k127_6752836_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 428.0
PJD1_k127_6752836_2 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003865 268.0
PJD1_k127_6752836_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000386 252.0
PJD1_k127_6752836_4 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.0000000000000000000000000000000000000004095 164.0
PJD1_k127_6796937_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 623.0
PJD1_k127_6796937_1 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000348 241.0
PJD1_k127_6796937_2 YaeQ - - - 0.000000000000000000000000000004653 122.0
PJD1_k127_6805548_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 610.0
PJD1_k127_6805548_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 567.0
PJD1_k127_6805548_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 449.0
PJD1_k127_6805548_3 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000009705 123.0
PJD1_k127_6805548_4 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000009223 96.0
PJD1_k127_6805548_5 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000129 75.0
PJD1_k127_6805548_6 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000002551 67.0
PJD1_k127_6810333_0 Cobalamin synthesis protein cobW C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 382.0
PJD1_k127_6810333_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000005841 252.0
PJD1_k127_6810333_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000131 198.0
PJD1_k127_6810333_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000001158 166.0
PJD1_k127_6810333_4 Putative zinc-finger - - - 0.00000000003049 67.0
PJD1_k127_6810788_0 Thiolase, C-terminal domain - - - 4.217e-200 633.0
PJD1_k127_6810788_1 AMP-binding enzyme C-terminal domain K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 512.0
PJD1_k127_6810788_2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 394.0
PJD1_k127_6810788_3 GntR family - - - 0.00000000000000000000000000000000000000000000000000000000000000009751 228.0
PJD1_k127_6810788_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000001043 240.0
PJD1_k127_6810788_5 COG1960 Acyl-CoA dehydrogenases - - - 0.0000000000000000000000000000000000000000002333 169.0
PJD1_k127_6835867_0 AMP-binding enzyme C-terminal domain K02363 - 2.7.7.58,6.3.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 477.0
PJD1_k127_6835867_1 Pfam:DUF1049 - - - 0.0000000000000000001033 93.0
PJD1_k127_6835867_2 MmgE/PrpD family - - - 0.00000000000004881 75.0
PJD1_k127_6911726_0 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000001761 184.0
PJD1_k127_6911726_1 PFAM diacylglycerol kinase catalytic region - - - 0.00000000000000000000000000000000000000007144 163.0
PJD1_k127_6911726_2 CoA-transferase family III - - - 0.000000000000002391 78.0
PJD1_k127_6912361_0 Phenylacetate-CoA oxygenase K02609 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000002519 226.0
PJD1_k127_6912361_1 thiolester hydrolase activity - - - 0.00000000000000000000000000000000000000239 153.0
PJD1_k127_6912361_2 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000001087 111.0
PJD1_k127_6912361_3 chromosome segregation K03497 - - 0.0000000000000000000004629 109.0
PJD1_k127_6912361_4 - - - - 0.000000002589 62.0
PJD1_k127_7017_0 PFAM ABC transporter - - - 1.83e-234 737.0
PJD1_k127_7017_1 Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 290.0
PJD1_k127_7130070_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 473.0
PJD1_k127_7130070_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 348.0
PJD1_k127_7131600_0 Insulinase (Peptidase family M16) K07263 - - 1.177e-200 627.0
PJD1_k127_7131600_1 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 394.0
PJD1_k127_7145402_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 1.234e-222 697.0
PJD1_k127_7145402_1 Amidohydrolase K03392,K10220 - 4.1.1.45,4.2.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005088 533.0
PJD1_k127_7145402_2 - - - - 0.000000000000000000000000000000000003586 145.0
PJD1_k127_7145402_3 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000006636 96.0
PJD1_k127_7147996_0 response regulator K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 346.0
PJD1_k127_7147996_1 histidine kinase HAMP region domain protein K05962 - 2.7.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000007395 262.0
PJD1_k127_7148389_0 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 481.0
PJD1_k127_7148389_1 Proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000003266 265.0
PJD1_k127_7151091_0 Belongs to the IlvD Edd family - - - 1.718e-276 858.0
PJD1_k127_7151091_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 362.0
PJD1_k127_7151091_2 Protein of unknown function, DUF255 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 289.0
PJD1_k127_7151091_3 FAD linked oxidases, C-terminal domain K18930 - - 0.0000000000000000000000000000000000000000000000000000000000000000007017 231.0
PJD1_k127_7151091_4 PFAM Bacterial protein of - - - 0.000000000000000000000000000000000000000000000000000000001675 209.0
PJD1_k127_7152927_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 596.0
PJD1_k127_7152927_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009881 308.0
PJD1_k127_7152927_2 TonB-dependent receptor - - - 0.0000001315 59.0
PJD1_k127_7158035_0 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 8.114e-282 882.0
PJD1_k127_7158308_0 polyphosphate kinase - - - 3.786e-202 635.0
PJD1_k127_7158308_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 448.0
PJD1_k127_7158308_2 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 424.0
PJD1_k127_7158308_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008672 411.0
PJD1_k127_7158308_4 abc transporter K02003,K05685 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 313.0
PJD1_k127_7158308_5 haloacid dehalogenase-like hydrolase K02203 - 2.7.1.39,3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 297.0
PJD1_k127_7158308_6 Chromate resistance exported protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002135 256.0
PJD1_k127_7158308_7 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000008898 197.0
PJD1_k127_7158362_0 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032 - - 1.067e-228 730.0
PJD1_k127_7158362_1 COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004507 269.0
PJD1_k127_7158362_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000005041 209.0
PJD1_k127_7158362_3 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 - 6.3.4.15 0.0000000000000000000000000000000000003667 151.0
PJD1_k127_7158362_4 PFAM Sporulation domain protein - - - 0.00000000000000000000000000000009496 136.0
PJD1_k127_7168836_0 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 468.0
PJD1_k127_7168836_1 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 293.0
PJD1_k127_7168836_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001371 250.0
PJD1_k127_7168836_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000003377 205.0
PJD1_k127_7168836_4 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000001521 199.0
PJD1_k127_7168836_5 dehydratase - - - 0.0000000000000000000000000000000000000000000000005528 192.0
PJD1_k127_7168836_6 COG1024 Enoyl-CoA hydratase carnithine racemase - - - 0.000001872 49.0
PJD1_k127_7172582_0 PFAM ABC transporter K02471 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006405 584.0
PJD1_k127_7172582_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000003097 166.0
PJD1_k127_7172582_2 carboxylic ester hydrolase activity K06999 GO:0003674,GO:0003824,GO:0016787,GO:0016788,GO:0052689 - 0.00000000000000000000000001452 127.0
PJD1_k127_7172582_3 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000003965 106.0
PJD1_k127_7172582_4 Amidohydrolase K03392 - 4.1.1.45 0.0000000000512 65.0
PJD1_k127_7173058_0 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 558.0
PJD1_k127_7173058_1 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 441.0
PJD1_k127_7173058_2 Histidine kinase K07641 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 357.0
PJD1_k127_7173058_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 308.0
PJD1_k127_7173058_4 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 304.0
PJD1_k127_7173058_5 membrane transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008867 296.0
PJD1_k127_7173058_6 protein histidine kinase activity - - - 0.00001543 58.0
PJD1_k127_7173402_0 Glutamine amidotransferases class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001849 276.0
PJD1_k127_7173402_1 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000005325 188.0
PJD1_k127_7173402_2 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000001328 166.0
PJD1_k127_7173402_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000004391 72.0
PJD1_k127_7175318_0 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000578 627.0
PJD1_k127_7175318_1 Putative esterase - - - 0.00000000000000000000000000000000000000001619 176.0
PJD1_k127_7175318_2 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000005791 99.0
PJD1_k127_7175318_3 - - - - 0.000000000000000000003187 104.0
PJD1_k127_7187867_0 extracellular solute-binding protein - - - 1.612e-289 917.0
PJD1_k127_7187867_1 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 505.0
PJD1_k127_7187867_2 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 469.0
PJD1_k127_7187867_3 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 351.0
PJD1_k127_7187867_4 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000007908 218.0
PJD1_k127_7189380_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075 607.0
PJD1_k127_7189380_1 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.00000000000000000000000000000000000000000000000000000000000000002112 232.0
PJD1_k127_7189380_2 - - - - 0.0000000000001139 76.0
PJD1_k127_7189380_3 CYTH K01768 - 4.6.1.1 0.0000000003749 62.0
PJD1_k127_7189882_0 CoA transferase having broad substrate specificity for short-chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons K01026 - 2.8.3.1 3.571e-219 691.0
PJD1_k127_7189882_1 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 495.0
PJD1_k127_7189882_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003183 468.0
PJD1_k127_7189882_3 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000000000000000003761 201.0
PJD1_k127_7189882_4 Protein of unknown function (DUF465) - - - 0.000001792 50.0
PJD1_k127_7193578_0 TIGRFAM glutamine synthetase, type I K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 5.457e-246 766.0
PJD1_k127_7193578_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 4.238e-216 681.0
PJD1_k127_7193578_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 449.0
PJD1_k127_7193578_3 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007136 395.0
PJD1_k127_7193578_4 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000663 133.0
PJD1_k127_7193578_5 Domain of unknown function (DUF4124) - - - 0.000000000000000000000001203 111.0
PJD1_k127_7196446_0 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 320.0
PJD1_k127_7196446_1 abc transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004934 300.0
PJD1_k127_7196446_2 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase K19200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003893 283.0
PJD1_k127_7196446_3 Belongs to the binding-protein-dependent transport system permease family K01997,K01998 - - 0.0000000000000000000000000000000002402 133.0
PJD1_k127_7196446_4 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000008597 99.0
PJD1_k127_7198393_0 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000146 274.0
PJD1_k127_7198393_1 Protein of unknown function (DUF3300) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003009 281.0
PJD1_k127_7198393_2 Belongs to the enoyl-CoA hydratase isomerase family K01692,K11264 - 4.1.1.41,4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000005916 270.0
PJD1_k127_7208734_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 415.0
PJD1_k127_7208734_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 368.0
PJD1_k127_7219260_0 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009433 535.0
PJD1_k127_7219260_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000000000166 173.0
PJD1_k127_7227512_0 4-hydroxyphenylacetate 3-hydroxylase C terminal - - - 1.766e-255 794.0
PJD1_k127_7227512_1 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases K06016 - 3.5.1.6,3.5.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 467.0
PJD1_k127_7227512_2 Protein of unknown function (DUF1847) - - - 0.0000000000000000000000000000000000000001596 171.0
PJD1_k127_7230565_0 Acyl-CoA dehydrogenase, C-terminal domain K11731 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 497.0
PJD1_k127_7230565_1 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005255 330.0
PJD1_k127_7230565_2 TonB-dependent receptor plug K02014 - - 0.00000000000000000000000000000000000000000000000000000000000007342 220.0
PJD1_k127_7230565_3 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.00000000000000000000007784 104.0
PJD1_k127_7230683_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 500.0
PJD1_k127_7230683_1 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006316 416.0
PJD1_k127_7230808_0 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 417.0
PJD1_k127_7230808_1 Dolichyl-phosphate-mannose-protein mannosyltransferase K00786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 403.0
PJD1_k127_7230808_2 UbiA prenyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001661 279.0
PJD1_k127_7230808_3 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000006032 166.0
PJD1_k127_7230808_4 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000008357 137.0
PJD1_k127_7230808_5 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.000000784 53.0
PJD1_k127_7237316_0 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000008786 245.0
PJD1_k127_7237316_1 PFAM transport-associated - - - 0.00000000000000000000000000000000000000000000000000000002618 211.0
PJD1_k127_7237316_2 HIRAN - - - 0.0000000000000000000000000000000003999 136.0
PJD1_k127_7237316_3 Uncharacterised protein family UPF0102 K07460 - - 0.0000000000000000000000000003797 117.0
PJD1_k127_7243259_0 COG1042 Acyl-CoA synthetase (NDP forming) - - - 1.293e-198 655.0
PJD1_k127_7243259_1 metal-dependent hydrolase of the TIM-barrel fold K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004694 443.0
PJD1_k127_7243259_10 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000006347 86.0
PJD1_k127_7243259_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 341.0
PJD1_k127_7243259_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005348 339.0
PJD1_k127_7243259_4 Acyl-CoA dehydrogenase, N-terminal domain K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006341 314.0
PJD1_k127_7243259_5 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005818 254.0
PJD1_k127_7243259_6 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000006432 231.0
PJD1_k127_7243259_7 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000003948 220.0
PJD1_k127_7243259_8 MmgE/PrpD family - - - 0.000000000000000000000000000000291 139.0
PJD1_k127_7243259_9 Belongs to the enoyl-CoA hydratase isomerase family K01692 GO:0003674,GO:0003824,GO:0004300,GO:0005488,GO:0005515,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019395,GO:0019439,GO:0019748,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 4.2.1.17 0.000000000000000000000005743 110.0
PJD1_k127_7252002_0 GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 482.0
PJD1_k127_7252002_1 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 460.0
PJD1_k127_7252002_2 MgtC family K07507 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000148 280.0
PJD1_k127_7252002_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000005387 179.0
PJD1_k127_7252002_4 cheY-homologous receiver domain - - - 0.00000000000000000000000000002035 125.0
PJD1_k127_7258514_0 pfkB family carbohydrate kinase K03272,K21344 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 363.0
PJD1_k127_7258514_1 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 301.0
PJD1_k127_7258514_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000002973 254.0
PJD1_k127_7261774_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000002142 205.0
PJD1_k127_7261774_1 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000002536 190.0
PJD1_k127_7261774_2 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000000000003225 126.0
PJD1_k127_7265377_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 1.275e-244 776.0
PJD1_k127_7265377_1 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.0000000000000000000000000000000000000002156 163.0
PJD1_k127_7267564_0 III protein, CoA-transferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006789 571.0
PJD1_k127_7267564_1 protein involved in response to NO K07234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004752 336.0
PJD1_k127_7267564_2 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K00087,K03520,K04108 - 1.17.1.4,1.2.5.3,1.3.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008755 317.0
PJD1_k127_7267564_3 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000002206 252.0
PJD1_k127_7267564_4 AMP-binding enzyme C-terminal domain - - - 0.00000000008473 64.0
PJD1_k127_7271696_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000974 416.0
PJD1_k127_7271696_1 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 388.0
PJD1_k127_7272290_0 ABC-type uncharacterized transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 353.0
PJD1_k127_7277539_0 transport system, periplasmic component K05813 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 449.0
PJD1_k127_7277539_1 PFAM extracellular solute-binding protein family 1 K05813 - - 0.00000000000001464 76.0
PJD1_k127_7288195_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007096 540.0
PJD1_k127_7288195_1 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000000000000000000000000000000000000000001745 247.0
PJD1_k127_7299869_0 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 469.0
PJD1_k127_7299869_1 Amidohydrolase - - - 0.0000000000000000000000000000000000008938 139.0
PJD1_k127_7311826_0 NAD dependent epimerase/dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006025 452.0
PJD1_k127_7311826_1 Cobalamin-independent synthase, Catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008982 281.0
PJD1_k127_7311826_2 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000673 233.0
PJD1_k127_7311826_3 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000001278 147.0
PJD1_k127_7346159_0 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002676 256.0
PJD1_k127_7346159_1 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000003492 211.0
PJD1_k127_7346159_2 PFAM thioesterase superfamily protein - - - 0.0000000000000000000000000000000000000000000000000000000008861 205.0
PJD1_k127_73478_0 acyl-CoA transferases carnitine dehydratase K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 485.0
PJD1_k127_73478_1 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005531 299.0
PJD1_k127_73478_2 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K01897 - 6.2.1.3 0.000000000000000000000003564 109.0
PJD1_k127_7354964_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007784 488.0
PJD1_k127_7354964_1 Response regulators consisting of a CheY-like receiver domain and a - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003034 260.0
PJD1_k127_7354964_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000005139 232.0
PJD1_k127_7391603_0 PFAM sigma-54 factor interaction domain-containing protein - - - 1.422e-210 662.0
PJD1_k127_7391603_1 Belongs to the peptidase S1C family K04691,K04772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007943 465.0
PJD1_k127_7391603_2 amino acid K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005556 372.0
PJD1_k127_7391603_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000002027 61.0
PJD1_k127_7398723_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008634 466.0
PJD1_k127_7398723_1 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000002488 205.0
PJD1_k127_7398723_2 Anthranilate synthase K01658 - 4.1.3.27 0.0000000000000000000005511 95.0
PJD1_k127_7427127_0 Acyl-CoA dehydrogenase, C-terminal domain K09456 - - 3.09e-205 653.0
PJD1_k127_7427127_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 444.0
PJD1_k127_7444426_0 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000000001507 214.0
PJD1_k127_7444426_1 Domain of unknown function (DUF4340) - - - 0.00000000000000000002261 104.0
PJD1_k127_7494234_0 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006993 471.0
PJD1_k127_7494234_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 373.0
PJD1_k127_7494234_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 334.0
PJD1_k127_7494234_3 Histidine kinase-like ATPase domain - - - 0.0000000000000000000000000000000000000000000000000003417 196.0
PJD1_k127_7494234_4 Protein of unknown function (DUF3309) - - - 0.0000000000000000001117 92.0
PJD1_k127_7494234_5 CsbD-like - - - 0.0000000002945 62.0
PJD1_k127_7494234_6 Glycine zipper 2TM domain - - - 0.000103 53.0
PJD1_k127_7510438_0 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000008064 214.0
PJD1_k127_7510438_1 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000001149 156.0
PJD1_k127_7510438_2 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000001299 156.0
PJD1_k127_7510438_3 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000001547 131.0
PJD1_k127_7510438_4 Ribonuclease E/G family K08301 - - 0.0000000000000000000000009236 114.0
PJD1_k127_7542481_0 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003983 327.0
PJD1_k127_7542481_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 333.0
PJD1_k127_7542481_2 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004501 244.0
PJD1_k127_7542481_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000003541 128.0
PJD1_k127_7564119_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 475.0
PJD1_k127_7564119_1 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.000000000000000000000009214 105.0
PJD1_k127_7583698_0 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006859 564.0
PJD1_k127_7583698_1 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 422.0
PJD1_k127_7583698_2 Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000294 286.0
PJD1_k127_7583698_3 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000005969 114.0
PJD1_k127_7600321_0 AMP-binding enzyme C-terminal domain K08295 - 6.2.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006736 512.0
PJD1_k127_7600321_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 427.0
PJD1_k127_7600321_2 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000002658 102.0
PJD1_k127_7604095_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 7.695e-230 717.0
PJD1_k127_7604095_1 Histidine kinase-like ATPases - - - 0.000000000000003806 80.0
PJD1_k127_7646234_0 FAD dependent oxidoreductase K00316 - 1.5.99.6 4.532e-244 768.0
PJD1_k127_7646234_1 DNA recombination protein, rmuC K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 460.0
PJD1_k127_7646234_2 PFAM globin K06886 - - 0.0000000000000000000000002176 106.0
PJD1_k127_7646234_3 Taurine catabolism dioxygenase TauD, TfdA family K22303 - - 0.0009687 42.0
PJD1_k127_76943_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 319.0
PJD1_k127_76943_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000439 273.0
PJD1_k127_76943_2 Thioesterase superfamily protein - - - 0.00000000000000000000000186 106.0
PJD1_k127_7717414_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 538.0
PJD1_k127_7717414_1 Spermidine synthase K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000005179 205.0
PJD1_k127_7717414_2 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000003487 141.0
PJD1_k127_7747786_0 Fe-S type, tartrate fumarate subfamily, alpha subunit K03779 - 4.2.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009648 394.0
PJD1_k127_7747786_1 Fumarase C-terminus K01678,K03780 - 4.2.1.2,4.2.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 332.0
PJD1_k127_7747786_2 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004262 253.0
PJD1_k127_7747786_3 Chalcone isomerase-like - - - 0.000000000000000000000000000000000000000000000000000000003054 205.0
PJD1_k127_7809388_0 Glutaredoxin-family domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 406.0
PJD1_k127_7809388_1 LysR substrate binding domain K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 329.0
PJD1_k127_7809388_2 Molybdopterin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003028 243.0
PJD1_k127_7809388_3 Etoposide-induced protein 2.4 (EI24) - - - 0.00000000000000000000000000000000000000001583 168.0
PJD1_k127_7809388_4 TIGRFAM ATP-dependent helicase HrpA K03578 - 3.6.4.13 0.0000000000000000000000000000000000000003581 154.0
PJD1_k127_7872930_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 561.0
PJD1_k127_7872930_1 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006781 436.0
PJD1_k127_7872930_2 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000231 235.0
PJD1_k127_7872930_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000000002604 168.0
PJD1_k127_7872930_4 membrane - - - 0.000000000000000000000000000000000000001363 156.0
PJD1_k127_78907_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 1093.0
PJD1_k127_78907_1 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 408.0
PJD1_k127_794102_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 6.287e-204 649.0
PJD1_k127_794102_1 SpoVT AbrB domain protein K18829 - - 0.00000000000005562 72.0
PJD1_k127_797686_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 4.999e-320 996.0
PJD1_k127_797686_1 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000001474 188.0
PJD1_k127_797686_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000003343 146.0
PJD1_k127_801111_0 Belongs to the peptidase S11 family K07262 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 301.0
PJD1_k127_801111_1 Histidine-specific methyltransferase, SAM-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000001906 244.0
PJD1_k127_803156_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 398.0
PJD1_k127_803156_1 Protein of unknown function (DUF3750) - - - 0.000000000000000000000000000000000000000000000000000000000000048 217.0
PJD1_k127_803156_2 Enoyl-(Acyl carrier protein) reductase K03793 - 1.5.1.33 0.00000008111 53.0
PJD1_k127_807688_0 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 300.0
PJD1_k127_807688_1 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000247 278.0
PJD1_k127_807688_2 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000406 211.0
PJD1_k127_807688_3 Protein of unknown function (DUF3095) - - - 0.00000000000000000000000000003928 121.0
PJD1_k127_815204_0 Lipid-A-disaccharide synthetase K00748 - 2.4.1.182 4.619e-209 655.0
PJD1_k127_815204_1 Ribonuclease HII K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 340.0
PJD1_k127_815204_2 Copper resistance protein D - - - 0.000000000000000000000000000000000000000001152 157.0
PJD1_k127_815204_3 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000952 76.0
PJD1_k127_823293_0 cysteine dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004094 256.0
PJD1_k127_823293_1 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000004569 214.0
PJD1_k127_823293_2 response to abiotic stimulus - - - 0.00000000005147 65.0
PJD1_k127_823293_3 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.0000000004193 64.0
PJD1_k127_837076_0 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 408.0
PJD1_k127_837076_1 toluene tolerance family protein K07323 - - 0.00000000000000000000000000000000000000000000000000008329 194.0
PJD1_k127_837076_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000001066 143.0
PJD1_k127_844363_0 general L-amino acid-binding periplasmic protein AapJ K09969 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009545 505.0
PJD1_k127_844363_1 COG0765 ABC-type amino acid transport system, permease component K09971 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 455.0
PJD1_k127_844363_2 acid transport system permease K09970 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 355.0
PJD1_k127_847482_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 451.0
PJD1_k127_847482_1 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006963 413.0
PJD1_k127_847482_2 Membrane protein TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006549 366.0
PJD1_k127_847482_3 PFAM fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009769 274.0
PJD1_k127_847482_4 Protein of unknown function (DUF3108) - - - 0.000006437 49.0
PJD1_k127_851235_0 Major Facilitator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 519.0
PJD1_k127_851235_1 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005911 286.0
PJD1_k127_851235_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000002319 182.0
PJD1_k127_851235_3 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789,K14742 - 2.3.1.128 0.000000000000000001644 86.0
PJD1_k127_856075_0 Indolepyruvate ferredoxin oxidoreductase K00179 - 1.2.7.8 1.269e-219 691.0
PJD1_k127_856075_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 583.0
PJD1_k127_856075_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 434.0
PJD1_k127_856075_3 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 434.0
PJD1_k127_856075_4 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006403 404.0
PJD1_k127_856075_5 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000001051 264.0
PJD1_k127_856075_6 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000000000005774 220.0
PJD1_k127_856409_0 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 435.0
PJD1_k127_856409_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005122 424.0
PJD1_k127_85784_0 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 467.0
PJD1_k127_85784_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000601 281.0
PJD1_k127_85784_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009875 279.0
PJD1_k127_85784_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001162 250.0
PJD1_k127_85784_4 Belongs to the phosphoglycerate mutase family K15634 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000003733 242.0
PJD1_k127_85784_5 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000114 128.0
PJD1_k127_864755_0 SMART beta-lactamase domain protein K01120 - 3.1.4.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009409 308.0
PJD1_k127_864755_1 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006126 284.0
PJD1_k127_870356_0 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 416.0
PJD1_k127_870356_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000006674 162.0
PJD1_k127_870356_2 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000000003322 147.0
PJD1_k127_870356_3 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000005643 126.0
PJD1_k127_870356_4 - - - - 0.0009687 42.0
PJD1_k127_874897_0 SMART PUA domain containing protein K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000001345 185.0
PJD1_k127_874897_1 Cobalamin synthesis protein cobW C-terminal domain - - - 0.00000000000000000000000000000000000003008 145.0
PJD1_k127_874897_2 - - - - 0.0003307 53.0
PJD1_k127_89840_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 435.0
PJD1_k127_89840_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 339.0
PJD1_k127_89840_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 318.0
PJD1_k127_89840_3 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000001136 122.0
PJD1_k127_911936_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 481.0
PJD1_k127_911936_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000001366 237.0
PJD1_k127_921698_0 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001781 256.0
PJD1_k127_921698_1 periplasmic protein thiol disulfide K02199 - - 0.000000000000000000000000000000000000000000000000000000000000003519 220.0
PJD1_k127_921698_2 PFAM cytochrome c biogenesis protein, transmembrane region - - - 0.00000000000000000000000000000000000001597 154.0
PJD1_k127_921698_3 Protein of unknown function (DUF1573) - - - 0.000009591 56.0
PJD1_k127_925141_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 4.278e-319 991.0
PJD1_k127_935362_0 MOFRL family K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 418.0
PJD1_k127_935362_1 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000002708 227.0
PJD1_k127_940316_0 twitching motility protein K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 464.0
PJD1_k127_940316_1 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 428.0
PJD1_k127_940316_2 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 291.0
PJD1_k127_940316_3 Amino acid transport and metabolism K14267 - 2.6.1.17 0.00000000000000000000000006914 108.0
PJD1_k127_945324_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 4.197e-232 735.0
PJD1_k127_95663_0 Soluble lytic murein transglycosylase L domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 473.0
PJD1_k127_95663_1 epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 327.0
PJD1_k127_95663_2 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000004614 222.0
PJD1_k127_957745_0 Adenylate cyclase K01768 - 4.6.1.1 3.469e-216 689.0
PJD1_k127_957745_1 Predicted membrane protein (DUF2069) - - - 0.000000000000000000000000000000000001094 141.0
PJD1_k127_957745_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000004429 102.0
PJD1_k127_959380_0 AcyL-CoA dehydrogenase K06445 - - 6.112e-302 940.0
PJD1_k127_959380_1 ABC transporter transmembrane region K06147 - - 9.542e-244 766.0
PJD1_k127_959380_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001151 246.0
PJD1_k127_961406_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 3.233e-240 753.0
PJD1_k127_961406_1 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 355.0
PJD1_k127_961406_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 319.0
PJD1_k127_961406_3 EamA-like transporter family - - - 0.000000000000000000001003 99.0
PJD1_k127_972045_0 Aconitase C-terminal domain K01681 - 4.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 387.0
PJD1_k127_972045_1 NAD(P)H-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007836 288.0
PJD1_k127_972045_2 Belongs to the GbsR family - - - 0.0000000000000000000000000000000000000000000000000000000000000356 219.0
PJD1_k127_972045_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000006684 182.0
PJD1_k127_972045_4 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.0000000000000000000000000000000001722 135.0
PJD1_k127_984180_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006725 493.0
PJD1_k127_984180_1 Ribosomal L25p family K02897 - - 0.000000000000000000000000000000000000000000000000000000000000000000005661 242.0
PJD1_k127_984180_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000007265 130.0
PJD1_k127_999982_0 cytochrome - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 350.0
PJD1_k127_999982_1 response regulator K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 334.0
PJD1_k127_999982_2 denitrification pathway - - - 0.000000000000000000000000000000000000000000000000000000000005888 214.0