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Overview

ID MAG02864
Name PJD1_bin.3
Sample SMP0067
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota
Class Desulfuromonadia
Order Geobacterales
Family Geobacteraceae
Genus RPRC01
Species
Assembly information
Completeness (%) 83.54
Contamination (%) 0.87
GC content (%) 54.0
N50 (bp) 18,331
Genome size (bp) 3,742,638

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3204

Gene name Description KEGG GOs EC E-value Score Sequence
PJD1_k127_1003856_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.885e-308 951.0
PJD1_k127_1003856_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007639 583.0
PJD1_k127_1003856_11 Ankyrin repeat - - - 0.00001124 55.0
PJD1_k127_1003856_2 Psort location CytoplasmicMembrane, score 10.00 K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 546.0
PJD1_k127_1003856_3 alcohol dehydrogenase K00001,K13954 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 429.0
PJD1_k127_1003856_4 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 355.0
PJD1_k127_1003856_5 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005469 354.0
PJD1_k127_1003856_6 Peptidyl-prolyl cis-trans isomerase K01802,K03769 - 5.2.1.8 0.0000000000000000000000000000000000005802 143.0
PJD1_k127_1003856_7 - - - - 0.00000000000000000000000000000000222 130.0
PJD1_k127_1003856_8 Uncharacterised protein family (UPF0270) K09898 - - 0.00000000000000000001768 93.0
PJD1_k127_1003856_9 Protein of unknown function (DUF3617) - - - 0.0000000000000000001546 95.0
PJD1_k127_1018109_0 - - - - 0.00000000000000000000000000000000000000002972 156.0
PJD1_k127_1018109_1 Transposase IS200 like - - - 0.000000000000000000000000000000000000132 148.0
PJD1_k127_1018109_3 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000007305 55.0
PJD1_k127_102804_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 404.0
PJD1_k127_102804_1 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 342.0
PJD1_k127_102804_2 DDE superfamily endonuclease - - - 0.00000000000000000000000000000000000000000000000008315 186.0
PJD1_k127_102804_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000001421 133.0
PJD1_k127_102804_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis K01007,K02078 - 2.7.9.2 0.00000000000000001638 84.0
PJD1_k127_102804_5 Response regulator, receiver - - - 0.000000000000001822 78.0
PJD1_k127_1066425_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1943.0
PJD1_k127_1066425_1 Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 2.76e-235 737.0
PJD1_k127_1066425_10 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000004866 241.0
PJD1_k127_1066425_11 Sirohaem biosynthesis protein central K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000000000000001996 202.0
PJD1_k127_1066425_12 Lytic transglycolase K03642 - - 0.0000000000000000000000000000000000000000000000000001883 196.0
PJD1_k127_1066425_13 Aminoacyl-tRNA editing domain - - - 0.0000000000000000000000000000000000000000000000002716 181.0
PJD1_k127_1066425_14 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000002348 177.0
PJD1_k127_1066425_15 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000181 166.0
PJD1_k127_1066425_16 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000000000007273 159.0
PJD1_k127_1066425_17 Outer membrane protein (OmpH-like) K06142 - - 0.0000000000000000000000000000000008769 139.0
PJD1_k127_1066425_18 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000004077 139.0
PJD1_k127_1066425_19 - - - - 0.0000000000000000001078 102.0
PJD1_k127_1066425_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 5.796e-209 664.0
PJD1_k127_1066425_20 TIGRFAM Pyridine nucleotide-disulfide oxidoreductase family protein - - - 0.00004383 52.0
PJD1_k127_1066425_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 1.169e-203 642.0
PJD1_k127_1066425_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 495.0
PJD1_k127_1066425_5 PFAM cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 402.0
PJD1_k127_1066425_6 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 317.0
PJD1_k127_1066425_7 PFAM Methyltransferase type K15256 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001346 259.0
PJD1_k127_1066425_8 Nucleotidyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004269 264.0
PJD1_k127_1066425_9 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000001472 248.0
PJD1_k127_1073243_0 PFAM AMP-dependent synthetase and ligase K00666 - - 5.508e-312 961.0
PJD1_k127_1073243_1 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 2.305e-212 666.0
PJD1_k127_1073243_10 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 455.0
PJD1_k127_1073243_11 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004876 433.0
PJD1_k127_1073243_12 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 412.0
PJD1_k127_1073243_13 TIGRFAM phosphate ABC transporter K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 400.0
PJD1_k127_1073243_14 response regulator K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 359.0
PJD1_k127_1073243_15 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 342.0
PJD1_k127_1073243_16 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 309.0
PJD1_k127_1073243_17 Protein of unknown function (DUF4254) - - - 0.000000000000000000000000000000000000000000000000000000000000000000004499 241.0
PJD1_k127_1073243_18 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000002048 231.0
PJD1_k127_1073243_19 PFAM AMMECR1 domain protein K09141 - - 0.0000000000000000000000000000000000000000000000000000000000000000215 228.0
PJD1_k127_1073243_2 Phosphate sensor histidine kinase, HAMP and PAS domain-containing K07636 - 2.7.13.3 3.176e-194 623.0
PJD1_k127_1073243_3 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005849 539.0
PJD1_k127_1073243_4 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 539.0
PJD1_k127_1073243_5 PFAM glycosyl transferase family 9 K02841 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 508.0
PJD1_k127_1073243_6 PFAM PfkB domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 500.0
PJD1_k127_1073243_7 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 477.0
PJD1_k127_1073243_8 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004731,GO:0006082,GO:0006139,GO:0006144,GO:0006168,GO:0006520,GO:0006555,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009112,GO:0009113,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0017061,GO:0017144,GO:0018130,GO:0019438,GO:0019509,GO:0019752,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000384 472.0
PJD1_k127_1073243_9 heptosyltransferase ii K02841,K02843,K02849 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 460.0
PJD1_k127_1098653_0 glutamate synthase - - - 2.243e-206 645.0
PJD1_k127_1098653_1 Conserved region in glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 342.0
PJD1_k127_1098653_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000002107 273.0
PJD1_k127_1098653_3 Belongs to the serpin family K13963 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001535 276.0
PJD1_k127_1098653_4 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000001154 166.0
PJD1_k127_1098653_5 - - - - 0.00000000000000000000000000000000000001575 160.0
PJD1_k127_1098653_6 sequence-specific DNA binding K00963 - 2.7.7.9 0.0000000000000000000000000000000000003232 145.0
PJD1_k127_1098653_7 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275,K17223 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.0000000000000000000000000002833 116.0
PJD1_k127_1098653_8 phosphorelay signal transduction system K03413 - - 0.000000000000000000003261 97.0
PJD1_k127_1098653_9 membrane protein domain - - - 0.00000000000000002465 96.0
PJD1_k127_109922_0 fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002987 274.0
PJD1_k127_109922_1 - - - - 0.000000000000000000000000001177 123.0
PJD1_k127_109922_4 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000002595 70.0
PJD1_k127_1131513_0 General secretory system II, protein E domain protein K02652 - - 9.992e-318 978.0
PJD1_k127_1131513_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 1.841e-264 834.0
PJD1_k127_1131513_10 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 392.0
PJD1_k127_1131513_11 ABC-type polysaccharide polyol phosphate transport system ATPase component K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 398.0
PJD1_k127_1131513_12 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 381.0
PJD1_k127_1131513_13 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008632 360.0
PJD1_k127_1131513_14 PFAM UbiA prenyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 347.0
PJD1_k127_1131513_15 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 334.0
PJD1_k127_1131513_16 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 332.0
PJD1_k127_1131513_17 ABC-2 family transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 305.0
PJD1_k127_1131513_18 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000001322 242.0
PJD1_k127_1131513_19 Prokaryotic N-terminal methylation motif K02650 - - 0.00000000000000162 82.0
PJD1_k127_1131513_2 response regulator K02667 - - 4.818e-213 674.0
PJD1_k127_1131513_3 twitching motility protein K02669 - - 2.244e-195 613.0
PJD1_k127_1131513_4 Protein of unknown function (DUF2723) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000984 617.0
PJD1_k127_1131513_5 PFAM type II secretion system K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 537.0
PJD1_k127_1131513_6 Sensor histidine kinase PilS, PAS domain-containing K02668,K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008092 528.0
PJD1_k127_1131513_7 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 437.0
PJD1_k127_1131513_8 ABC-2 type transporter K09690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 425.0
PJD1_k127_1131513_9 TIGRFAM riboflavin biosynthesis protein RibF K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004862 397.0
PJD1_k127_1134966_0 Transport of potassium into the cell K03549 - - 1.126e-302 937.0
PJD1_k127_1134966_1 Protein of unknown function, DUF255 K06888 - - 4.058e-234 745.0
PJD1_k127_1134966_10 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 407.0
PJD1_k127_1134966_11 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287 394.0
PJD1_k127_1134966_12 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 350.0
PJD1_k127_1134966_13 TIGRFAM 6-phosphogluconate dehydrogenase, decarboxylating K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 353.0
PJD1_k127_1134966_14 PFAM UBA THIF-type NAD FAD binding protein K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 337.0
PJD1_k127_1134966_15 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004665 276.0
PJD1_k127_1134966_16 COG3005 Nitrate TMAO reductases, membrane-bound tetraheme cytochrome c subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002716 254.0
PJD1_k127_1134966_17 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000000000000000000000000000000000002184 223.0
PJD1_k127_1134966_18 Guanylyl transferase CofC like K09931 - - 0.000000000000000000000000000000000000000000000000000000000000007799 223.0
PJD1_k127_1134966_19 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000355 192.0
PJD1_k127_1134966_2 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 8.312e-220 689.0
PJD1_k127_1134966_20 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.00000000000000000000000002268 126.0
PJD1_k127_1134966_21 Histidine kinase - - - 0.00000000000000000000001816 107.0
PJD1_k127_1134966_23 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00033 - 1.1.1.343,1.1.1.44 0.00000000002045 64.0
PJD1_k127_1134966_24 cheY-homologous receiver domain - - - 0.0000000009068 67.0
PJD1_k127_1134966_3 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 1.284e-212 665.0
PJD1_k127_1134966_4 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 7.035e-206 651.0
PJD1_k127_1134966_5 TIGRFAM branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 558.0
PJD1_k127_1134966_6 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 523.0
PJD1_k127_1134966_7 regulatory protein IclR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 445.0
PJD1_k127_1134966_8 Protein of unknown function (DUF3641) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 441.0
PJD1_k127_1134966_9 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 421.0
PJD1_k127_1177135_0 PFAM Integrase catalytic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 512.0
PJD1_k127_1177135_1 PFAM IstB domain protein ATP-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005922 283.0
PJD1_k127_1182691_0 TIGRFAM drug resistance transporter, EmrB QacA subfamily K03446 - - 8.822e-232 728.0
PJD1_k127_1182691_1 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 411.0
PJD1_k127_1182691_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000003622 168.0
PJD1_k127_1222272_0 histidine kinase, HAMP K13598 - 2.7.13.3 3.116e-308 960.0
PJD1_k127_1222272_1 response regulator K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 531.0
PJD1_k127_1222272_2 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004625 480.0
PJD1_k127_1222272_3 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 420.0
PJD1_k127_1222272_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 350.0
PJD1_k127_1222272_5 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004615 271.0
PJD1_k127_1222272_6 peptidyl-tyrosine sulfation K00525,K01768 - 1.17.4.1,4.6.1.1 0.000000000000000000000000000000000000000000000000003217 190.0
PJD1_k127_1222272_7 response regulator K13599 - - 0.0000000000000000000000000000000000000000000001381 170.0
PJD1_k127_1222272_8 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000001276 140.0
PJD1_k127_1222272_9 Protein of unknown function (DUF2905) - - - 0.000000000000000000000005537 103.0
PJD1_k127_124603_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1304.0
PJD1_k127_124603_1 Sensor sigma-54-dependent transcriptional regulator, GAF and GAF domain-containing - - - 0.0 1303.0
PJD1_k127_124603_10 PFAM natural resistance-associated macrophage protein - - - 3.173e-217 679.0
PJD1_k127_124603_11 histidine kinase A domain protein domain protein - - - 3.793e-207 657.0
PJD1_k127_124603_12 Na+ dependent nucleoside transporter C-terminus K03317 - - 2.717e-205 644.0
PJD1_k127_124603_13 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00437,K00533 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.12.2.1,1.12.7.2 2.025e-203 646.0
PJD1_k127_124603_14 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 1.056e-200 630.0
PJD1_k127_124603_15 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005932 604.0
PJD1_k127_124603_16 PFAM EAL domain, GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 587.0
PJD1_k127_124603_17 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 539.0
PJD1_k127_124603_18 MgtE intracellular N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 533.0
PJD1_k127_124603_19 Putative ATP-dependent DNA helicase recG C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 489.0
PJD1_k127_124603_2 Elongation factor G C-terminus K06207 - - 0.0 1030.0
PJD1_k127_124603_20 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000876 478.0
PJD1_k127_124603_21 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 470.0
PJD1_k127_124603_22 chlorophyll binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 459.0
PJD1_k127_124603_23 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 449.0
PJD1_k127_124603_24 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 404.0
PJD1_k127_124603_25 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000761 390.0
PJD1_k127_124603_26 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007737 392.0
PJD1_k127_124603_27 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 392.0
PJD1_k127_124603_28 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005676 380.0
PJD1_k127_124603_29 PFAM ParB domain protein nuclease K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007235 379.0
PJD1_k127_124603_3 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 3.431e-296 920.0
PJD1_k127_124603_30 Beta-lactamase superfamily domain K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007622 376.0
PJD1_k127_124603_31 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 357.0
PJD1_k127_124603_32 Ethanolamine ammonia-lyase light chain (EutC) K03736 - 4.3.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 360.0
PJD1_k127_124603_33 Hydrogenase (NiFe) small subunit HydA K00534,K06282,K18008 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.12.2.1,1.12.7.2,1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 351.0
PJD1_k127_124603_34 Domains REC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008986 313.0
PJD1_k127_124603_35 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006653 311.0
PJD1_k127_124603_36 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006304 270.0
PJD1_k127_124603_37 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007896 273.0
PJD1_k127_124603_38 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003312 285.0
PJD1_k127_124603_39 Protein of unknown function (DUF520) K09767 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001212 257.0
PJD1_k127_124603_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 4.601e-291 897.0
PJD1_k127_124603_40 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000004421 241.0
PJD1_k127_124603_41 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.00000000000000000000000000000000000000000000000000000000000000000456 233.0
PJD1_k127_124603_42 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000002564 232.0
PJD1_k127_124603_43 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000000000000000000000000000000000000000000000002258 214.0
PJD1_k127_124603_44 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000000000000002661 205.0
PJD1_k127_124603_45 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000002212 184.0
PJD1_k127_124603_46 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000002237 163.0
PJD1_k127_124603_47 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000004173 160.0
PJD1_k127_124603_48 PKD domain containing protein K01337,K20276,K21449 - 3.4.21.50 0.00000000000000000000000000000000000003529 157.0
PJD1_k127_124603_49 - - - - 0.000000000000000000000000000000000001161 144.0
PJD1_k127_124603_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 3.989e-283 872.0
PJD1_k127_124603_50 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000005083 132.0
PJD1_k127_124603_51 - - - - 0.000000000000000000000000002618 116.0
PJD1_k127_124603_52 - - - - 0.00000000000000000000000141 108.0
PJD1_k127_124603_53 Divergent 4Fe-4S mono-cluster K05337 - - 0.000000000000000000000006742 103.0
PJD1_k127_124603_54 Psort location Cytoplasmic, score - - - 0.00000000000000000000001595 100.0
PJD1_k127_124603_55 - - - - 0.0000000000000000000004579 103.0
PJD1_k127_124603_56 Cytochrome c K08906,K12263 - - 0.000000000000000000001685 98.0
PJD1_k127_124603_57 - - - - 0.000000000000000000005453 95.0
PJD1_k127_124603_58 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000000005959 87.0
PJD1_k127_124603_59 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.000000000000000002126 88.0
PJD1_k127_124603_6 TIGRFAM ATP-dependent helicase HrpB K03579 - 3.6.4.13 1.404e-281 889.0
PJD1_k127_124603_60 - - - - 0.000000002405 64.0
PJD1_k127_124603_61 - - - - 0.000000003243 63.0
PJD1_k127_124603_62 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000007051 67.0
PJD1_k127_124603_63 RDD family - - - 0.00000001239 62.0
PJD1_k127_124603_64 - - - - 0.0000005898 53.0
PJD1_k127_124603_67 PFAM CheW domain protein K13488 - - 0.0002521 51.0
PJD1_k127_124603_7 Ethanolamine ammonia lyase large subunit (EutB) K03735 - 4.3.1.7 9.684e-260 805.0
PJD1_k127_124603_8 - - - - 7.837e-238 750.0
PJD1_k127_124603_9 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 2.275e-235 736.0
PJD1_k127_1251917_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 1.094e-287 904.0
PJD1_k127_1251917_1 Major facilitator K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 498.0
PJD1_k127_1251917_2 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 408.0
PJD1_k127_1251917_3 BRO family, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 361.0
PJD1_k127_1251917_4 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000001662 159.0
PJD1_k127_1251917_5 Cobalamin biosynthesis central region K02189 - 3.7.1.12 0.000000000000000000000000000000000003628 139.0
PJD1_k127_1265327_0 sister chromatid segregation - - - 7.043e-197 626.0
PJD1_k127_1265327_1 ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001113 279.0
PJD1_k127_1265327_2 PFAM SufBD protein K07033 - - 0.0000000000000000000000000000000000000000000004819 173.0
PJD1_k127_1337483_0 4Fe-4S binding domain - - - 6.286e-205 653.0
PJD1_k127_1337483_1 Sigma factor PP2C-like phosphatases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 464.0
PJD1_k127_1337483_2 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007064 297.0
PJD1_k127_1337483_3 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.0000000000000000000000000000000000000000000000000000000001554 209.0
PJD1_k127_1337483_4 NADH dehydrogenase K00335 - 1.6.5.3 0.000000000000000000000000000008781 119.0
PJD1_k127_1337483_5 Thioredoxin-like [2Fe-2S] ferredoxin - - - 0.000000000000000000002722 95.0
PJD1_k127_1359153_0 RHS Repeat - - - 1.543e-236 751.0
PJD1_k127_1359153_1 Phage late control gene D protein (GPD) K11904 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 522.0
PJD1_k127_1359153_2 D-alanyl-D-alanine carboxypeptidase - - - 0.000000000000000000000000000000000000001957 160.0
PJD1_k127_1359153_3 protein kinase activity - - - 0.0000000000000000000000000000000000003966 144.0
PJD1_k127_1359153_4 - - - - 0.00000000000000000000006319 106.0
PJD1_k127_1359153_5 - - - - 0.00000000000000000002267 96.0
PJD1_k127_1359153_6 - - - - 0.000000000000000004608 92.0
PJD1_k127_1360638_0 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004282 468.0
PJD1_k127_1360638_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 362.0
PJD1_k127_1360638_2 RadC-like JAB domain K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 301.0
PJD1_k127_1360638_3 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 GO:0000302,GO:0003674,GO:0003824,GO:0004601,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016661,GO:0016684,GO:0042221,GO:0042493,GO:0042542,GO:0046677,GO:0050418,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748 1.7.99.1 0.00000000000000000000000000000000000000000000000000000000000000000006603 238.0
PJD1_k127_1360638_4 CoA binding domain - - - 0.0000000000000000000000000000000009735 136.0
PJD1_k127_1388519_0 Alginate export - - - 6.533e-220 695.0
PJD1_k127_1388519_1 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006,K16787 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003157 416.0
PJD1_k127_1388519_2 AAA domain K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 362.0
PJD1_k127_1388519_3 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 344.0
PJD1_k127_1420996_0 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 2.758e-314 974.0
PJD1_k127_1420996_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 537.0
PJD1_k127_1420996_2 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008901 464.0
PJD1_k127_1420996_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 439.0
PJD1_k127_1420996_4 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000001698 214.0
PJD1_k127_1420996_5 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000006827 214.0
PJD1_k127_1420996_6 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000006747 204.0
PJD1_k127_1420996_7 Flagellar hook-length control protein FliK - - - 0.00000000000000000000000000000000000000000000000000001924 209.0
PJD1_k127_1473986_0 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808 595.0
PJD1_k127_1473986_1 mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 458.0
PJD1_k127_1473986_10 Domain of unknown function (DUF4431) - - - 0.000000000000000000003314 96.0
PJD1_k127_1473986_2 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 364.0
PJD1_k127_1473986_3 Psort location CytoplasmicMembrane, score 10.00 K03458 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 368.0
PJD1_k127_1473986_4 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041 308.0
PJD1_k127_1473986_5 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001121 272.0
PJD1_k127_1473986_6 Chemotaxis phosphatase CheX - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001375 254.0
PJD1_k127_1473986_7 PFAM type IV pilus assembly PilZ - - - 0.000000000000000000000000000000000000000000000000004577 189.0
PJD1_k127_1473986_8 Tyrosine phosphatase family K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000002322 180.0
PJD1_k127_1473986_9 Single Cache domain 2 K07647 - 2.7.13.3 0.000000000000000000000000000000000002889 150.0
PJD1_k127_1495742_0 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 520.0
PJD1_k127_1495742_1 Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 508.0
PJD1_k127_1495742_10 MORN repeat variant - - - 0.000000000001788 74.0
PJD1_k127_1495742_11 COG3209 Rhs family protein - - - 0.000002187 55.0
PJD1_k127_1495742_2 Glutathionylspermidine synthase preATP-grasp - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 509.0
PJD1_k127_1495742_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 456.0
PJD1_k127_1495742_4 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006699 293.0
PJD1_k127_1495742_5 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003023 267.0
PJD1_k127_1495742_6 - - - - 0.0000000000000000000007926 105.0
PJD1_k127_1495742_7 PFAM Methyltransferase type 11 - - - 0.00000000000000000006869 92.0
PJD1_k127_1495742_9 DnaJ molecular chaperone homology domain - - - 0.000000000000147 82.0
PJD1_k127_1498743_0 PFAM asparagine synthase K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 409.0
PJD1_k127_1498743_1 BRO family, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 304.0
PJD1_k127_1498743_2 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000001768 210.0
PJD1_k127_1498743_3 Putative zinc- or iron-chelating domain - - - 0.000000000000000000000000000000001551 133.0
PJD1_k127_1500293_0 Sulfatase - - - 2.837e-258 811.0
PJD1_k127_1500293_1 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 538.0
PJD1_k127_1500293_10 Winged helix-turn-helix DNA-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001969 261.0
PJD1_k127_1500293_11 PFAM Glycosyl transferase family 2 K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001485 250.0
PJD1_k127_1500293_13 AAA domain K07133 - - 0.000000000000000000000000001661 121.0
PJD1_k127_1500293_14 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000002342 101.0
PJD1_k127_1500293_2 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002827 482.0
PJD1_k127_1500293_3 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 443.0
PJD1_k127_1500293_4 PFAM membrane bound O-acyl transferase MBOAT family protein K19294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 441.0
PJD1_k127_1500293_5 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004632 401.0
PJD1_k127_1500293_6 Caenorhabditis protein of unknown function, DUF268 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 323.0
PJD1_k127_1500293_7 PFAM polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 307.0
PJD1_k127_1500293_8 Glycosyl transferase family 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 290.0
PJD1_k127_1500293_9 PFAM Glycosyl transferase family 2 K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002042 282.0
PJD1_k127_1504453_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 481.0
PJD1_k127_1504453_1 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000978 243.0
PJD1_k127_1504453_2 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000004446 106.0
PJD1_k127_1584558_0 ABC transporter C-terminal domain K15738 - - 2.006e-291 906.0
PJD1_k127_1584558_1 Histidine carboxylase PI chain K01590 - 4.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008364 418.0
PJD1_k127_1584558_3 Putative exonuclease, RdgC K03554 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001625 249.0
PJD1_k127_1607449_0 4Fe-4S dicluster domain - - - 9.962e-224 699.0
PJD1_k127_1607449_1 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 537.0
PJD1_k127_1607449_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 422.0
PJD1_k127_1607449_3 GIY-YIG type nucleases (URI domain) K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005624 378.0
PJD1_k127_1607449_4 SOS response associated peptidase (SRAP) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001163 276.0
PJD1_k127_1607449_5 Peptidase S24-like K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000001781 168.0
PJD1_k127_1676754_0 Heat shock 70 kDa protein K04043 - - 0.0 1101.0
PJD1_k127_1676754_1 von Willebrand factor, type A K07114 - - 4.418e-283 891.0
PJD1_k127_1676754_10 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 282.0
PJD1_k127_1676754_11 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000003707 226.0
PJD1_k127_1676754_12 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000000000000001183 218.0
PJD1_k127_1676754_13 TonB C terminal K03646,K03832 - - 0.000000000000000000000000000000000000000000000000000004565 199.0
PJD1_k127_1676754_14 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.00000000000000000000000000000000000000000000000000004201 190.0
PJD1_k127_1676754_15 PFAM OmpA MotB domain protein K03640 - - 0.000000000000000000000000000000000000000000000000001831 187.0
PJD1_k127_1676754_16 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000001327 162.0
PJD1_k127_1676754_17 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000006892 146.0
PJD1_k127_1676754_18 ATP synthase I chain - - - 0.0000000000000000000000000007772 117.0
PJD1_k127_1676754_19 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000006344 109.0
PJD1_k127_1676754_2 PFAM Aminotransferase class-III K01845 - 5.4.3.8 1.494e-210 662.0
PJD1_k127_1676754_20 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.000000000000000001344 89.0
PJD1_k127_1676754_21 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.000000000000000003211 87.0
PJD1_k127_1676754_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 4.925e-202 633.0
PJD1_k127_1676754_4 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 571.0
PJD1_k127_1676754_5 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008343 507.0
PJD1_k127_1676754_6 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 450.0
PJD1_k127_1676754_7 nitrite sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 359.0
PJD1_k127_1676754_8 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004979 335.0
PJD1_k127_1676754_9 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000924 321.0
PJD1_k127_1677278_0 Multicopper oxidase K08100 - 1.3.3.5 0.0 1030.0
PJD1_k127_1677278_1 Hydrogenase maturation protease K03605 - - 0.0000000000000000000000000000000000000000007562 161.0
PJD1_k127_1677278_2 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.000000000000000000000000003103 113.0
PJD1_k127_1680000_0 Transcriptional regulator - - - 2.139e-235 739.0
PJD1_k127_1680000_1 Proposed nucleic acid binding domain - - - 1.243e-223 730.0
PJD1_k127_1680000_2 RNA-directed DNA polymerase (Reverse transcriptase) K00986 - 2.7.7.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 541.0
PJD1_k127_1680000_3 Phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 484.0
PJD1_k127_1680000_4 ATP-binding region, ATPase domain protein domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 446.0
PJD1_k127_1680000_5 - - - - 0.00000000000000000000000000000000000000001708 160.0
PJD1_k127_1680000_6 - - - - 0.000000000000000000000000000000000000006939 149.0
PJD1_k127_1680000_8 Integrase core domain - - - 0.000000000000000000001319 98.0
PJD1_k127_1680000_9 - - - - 0.0000000000002376 73.0
PJD1_k127_1691220_0 SPFH domain / Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 383.0
PJD1_k127_1691220_1 COG0739 Membrane proteins related to metalloendopeptidases K21472 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002655 266.0
PJD1_k127_1691220_2 PFAM CheW domain protein K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000001952 225.0
PJD1_k127_1691220_3 methyltransferase activity - - - 0.00000000000000000000000000000000000000000000002656 175.0
PJD1_k127_1703775_0 CHAT domain - - - 3.974e-209 667.0
PJD1_k127_1703775_1 Putative prokaryotic signal transducing protein - - - 0.000000000000000000000000008027 114.0
PJD1_k127_1703775_2 - - - - 0.000000000000000001437 89.0
PJD1_k127_1721558_0 histidine kinase A domain protein - - - 2.177e-269 860.0
PJD1_k127_1721558_1 Filamentation induced by cAMP protein fic - - - 5.098e-203 644.0
PJD1_k127_1721558_2 Protein of unknown function (DUF445) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 568.0
PJD1_k127_1721558_3 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009332 463.0
PJD1_k127_1721558_4 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 456.0
PJD1_k127_1721558_5 endonuclease III K07457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 318.0
PJD1_k127_1721558_6 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001231 287.0
PJD1_k127_1721558_7 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000007579 227.0
PJD1_k127_1721558_8 PLD-like domain - - - 0.00000000000000000000000000000000000000000000000000000000001701 211.0
PJD1_k127_1721558_9 TIGRFAM RNA polymerase sigma factor, FliA WhiG family K02405 - - 0.00000133 54.0
PJD1_k127_1728598_0 Domain of unknown function (DUF4143) K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 439.0
PJD1_k127_1728598_1 Amidohydrolase - - - 0.000000000000000000000000000000000000000000001134 182.0
PJD1_k127_1728598_2 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000001947 158.0
PJD1_k127_1728598_3 Lysin motif - - - 0.000000000000000000000000000008741 132.0
PJD1_k127_1764325_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0 1074.0
PJD1_k127_1764325_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 7.971e-304 937.0
PJD1_k127_1764325_2 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 1.329e-267 826.0
PJD1_k127_1764325_3 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001444 274.0
PJD1_k127_1764325_4 - - - - 0.00000000000000000000000000000000000000001658 156.0
PJD1_k127_1774639_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1489.0
PJD1_k127_1774639_1 leucyl-tRNA aminoacylation K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1360.0
PJD1_k127_1774639_10 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 1.512e-215 676.0
PJD1_k127_1774639_11 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 1.225e-199 625.0
PJD1_k127_1774639_12 histidine kinase HAMP region domain protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 617.0
PJD1_k127_1774639_13 regulator, PATAN and FRGAF domain-containing - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 608.0
PJD1_k127_1774639_14 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 588.0
PJD1_k127_1774639_15 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 536.0
PJD1_k127_1774639_16 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000084 535.0
PJD1_k127_1774639_17 PFAM aminotransferase class I and II K14155 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 529.0
PJD1_k127_1774639_18 HEAT repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007103 532.0
PJD1_k127_1774639_19 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 502.0
PJD1_k127_1774639_2 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1320.0
PJD1_k127_1774639_20 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 490.0
PJD1_k127_1774639_21 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 490.0
PJD1_k127_1774639_22 SurA N-terminal domain K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 489.0
PJD1_k127_1774639_23 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 477.0
PJD1_k127_1774639_24 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009053 488.0
PJD1_k127_1774639_25 lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 459.0
PJD1_k127_1774639_26 Major Facilitator Superfamily K02445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 441.0
PJD1_k127_1774639_27 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 437.0
PJD1_k127_1774639_28 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 427.0
PJD1_k127_1774639_29 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 427.0
PJD1_k127_1774639_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1227.0
PJD1_k127_1774639_30 PFAM PSP1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 419.0
PJD1_k127_1774639_31 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 415.0
PJD1_k127_1774639_32 PFAM beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 413.0
PJD1_k127_1774639_33 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 432.0
PJD1_k127_1774639_34 Pfam:Arch_ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 397.0
PJD1_k127_1774639_35 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 383.0
PJD1_k127_1774639_36 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000764 377.0
PJD1_k127_1774639_37 DNA polymerase III, delta subunit, C terminal K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 359.0
PJD1_k127_1774639_38 cyclic diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 359.0
PJD1_k127_1774639_39 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009048 350.0
PJD1_k127_1774639_4 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1188.0
PJD1_k127_1774639_40 Stationary phase survival protein, YicC family, YicC_N and DUF1732 domain-containing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007619 327.0
PJD1_k127_1774639_41 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006776 321.0
PJD1_k127_1774639_42 geranylgeranyl reductase activity K06444,K14257,K17830 - 1.14.19.49,1.3.1.101,1.3.7.11,5.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 320.0
PJD1_k127_1774639_43 zinc-ribbon domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 317.0
PJD1_k127_1774639_44 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006498 296.0
PJD1_k127_1774639_45 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 290.0
PJD1_k127_1774639_46 Transcriptional regulator, ModE family K02019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009347 288.0
PJD1_k127_1774639_47 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005852 278.0
PJD1_k127_1774639_48 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004661 277.0
PJD1_k127_1774639_49 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003991 272.0
PJD1_k127_1774639_5 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.0 1011.0
PJD1_k127_1774639_50 HAD-hyrolase-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001645 275.0
PJD1_k127_1774639_51 Protein of unknown function (DUF3999) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001657 292.0
PJD1_k127_1774639_52 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000002592 269.0
PJD1_k127_1774639_53 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000543 261.0
PJD1_k127_1774639_54 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002261 267.0
PJD1_k127_1774639_55 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000007921 250.0
PJD1_k127_1774639_56 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000004269 239.0
PJD1_k127_1774639_57 TIGRFAM D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000000008533 241.0
PJD1_k127_1774639_58 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000001463 244.0
PJD1_k127_1774639_59 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000005573 253.0
PJD1_k127_1774639_6 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.204e-296 914.0
PJD1_k127_1774639_60 PFAM glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000009769 247.0
PJD1_k127_1774639_61 PFAM Desulfoferrodoxin, ferrous iron-binding region K05919 - 1.15.1.2 0.000000000000000000000000000000000000000000000000000000000000006696 218.0
PJD1_k127_1774639_62 Putative regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000003045 215.0
PJD1_k127_1774639_63 Domain of unknown function (DUF296) - - - 0.000000000000000000000000000000000000000000000000000000000002837 213.0
PJD1_k127_1774639_64 Response regulator receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000000000002517 209.0
PJD1_k127_1774639_65 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000000000000004791 186.0
PJD1_k127_1774639_66 PFAM response regulator receiver K03413 - - 0.000000000000000000000000000000000000000000000000002133 186.0
PJD1_k127_1774639_67 Translation initiation factor SUI1 K03113 - - 0.00000000000000000000000000000000000000000000000005006 181.0
PJD1_k127_1774639_68 PFAM CheW domain protein K03408 - - 0.0000000000000000000000000000000000000000000000005258 184.0
PJD1_k127_1774639_69 SMART HNH nuclease K07451 - - 0.000000000000000000000000000000000000000000000003174 174.0
PJD1_k127_1774639_7 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 9.425e-280 873.0
PJD1_k127_1774639_70 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000005535 171.0
PJD1_k127_1774639_71 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000007705 182.0
PJD1_k127_1774639_73 Lipopolysaccharide-assembly - - - 0.0000000000000000000000000000000000000004805 155.0
PJD1_k127_1774639_74 rod shape-determining protein MreD K03571 - - 0.00000000000000000000000000000000000001069 151.0
PJD1_k127_1774639_75 PFAM Sel1 domain protein repeat-containing protein K07126 - - 0.000000000000000000000000000000000000132 148.0
PJD1_k127_1774639_76 Belongs to the Nudix hydrolase family - - - 0.000000000000000000000000000000000002121 142.0
PJD1_k127_1774639_77 acylphosphatase activity K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000000000000004313 126.0
PJD1_k127_1774639_78 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000000000006122 126.0
PJD1_k127_1774639_79 structural constituent of ribosome K02902 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000001822 118.0
PJD1_k127_1774639_8 Predicted membrane protein (DUF2339) - - - 1.358e-236 761.0
PJD1_k127_1774639_80 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000005867 110.0
PJD1_k127_1774639_81 - - - - 0.0000000000000003448 83.0
PJD1_k127_1774639_82 Rubredoxin - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000005817 80.0
PJD1_k127_1774639_9 Catalyzes the phosphorylation of D-glycero-D-manno- heptose 7-phosphate at the C-1 position to selectively form D- glycero-beta-D-manno-heptose-1,7-bisphosphate K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 2.736e-219 689.0
PJD1_k127_1783734_0 Protein of unknown function DUF2625 - - - 0.000000000000000000000000000000000000000000000000000000000000000002333 233.0
PJD1_k127_1783734_1 - - - - 0.00000000000000000000000003562 111.0
PJD1_k127_1783734_2 - - - - 0.00000000000000000001776 100.0
PJD1_k127_1783734_3 Protein of unknown function (DUF1493) - - - 0.0001474 50.0
PJD1_k127_1787261_0 Peptidase family M48 - - - 2.691e-307 985.0
PJD1_k127_1787261_1 metal-dependent phosphohydrolase HD region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009401 579.0
PJD1_k127_1787261_2 Carotenoid biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004741 439.0
PJD1_k127_1787261_3 3-demethylubiquinone-9 3-O-methyltransferase activity K11434,K19737 - 2.1.1.319,2.1.1.320 0.00006468 51.0
PJD1_k127_1818_0 Uncharacterised protein family (UPF0182) K09118 - - 0.0 1328.0
PJD1_k127_1818_1 ImcF-related N-terminal domain K11891 - - 0.0 1153.0
PJD1_k127_1818_10 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 448.0
PJD1_k127_1818_11 ImpA, N-terminal, type VI secretion system K11902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000843 419.0
PJD1_k127_1818_12 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 383.0
PJD1_k127_1818_13 MlaD protein K06192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001364 287.0
PJD1_k127_1818_14 Type VI secretion system protein DotU K11892 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001576 260.0
PJD1_k127_1818_15 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001836 279.0
PJD1_k127_1818_16 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004012 251.0
PJD1_k127_1818_17 histone H2A K63-linked ubiquitination - - - 0.000000000000000000000000000000000000000000000000000000000000000001992 238.0
PJD1_k127_1818_18 Protein of avirulence locus involved in temperature-dependent protein secretion K03217,K11898 - - 0.000000000000000000000000000000000000000000000000002677 192.0
PJD1_k127_1818_19 ImpA, N-terminal, type VI secretion system K11910 - - 0.00000000000000000000000000000000000000000000000001824 190.0
PJD1_k127_1818_2 General secretory system II protein E domain protein - - - 3.519e-310 966.0
PJD1_k127_1818_20 peptidase - - - 0.0000000000000000000000000000000000000000000000003991 185.0
PJD1_k127_1818_21 ABC-type transport auxiliary lipoprotein component K09857 - - 0.0000000000000000000000000000000000000002112 157.0
PJD1_k127_1818_22 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 - - - 0.00000000000000000000000000000000000212 143.0
PJD1_k127_1818_23 - - - - 0.000000000000000000000000000007768 128.0
PJD1_k127_1818_24 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000001036 101.0
PJD1_k127_1818_25 B12 binding domain - - - 0.0000000000001472 72.0
PJD1_k127_1818_26 Methionine synthase B12-binding module cap domain protein K00548,K14081,K16179 - 2.1.1.13 0.0000000000001908 75.0
PJD1_k127_1818_27 Putative quorum-sensing-regulated virulence factor K09954 - - 0.000000000002633 70.0
PJD1_k127_1818_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 3.271e-278 885.0
PJD1_k127_1818_4 Type VI secretion protein, EvpB/VC_A0108, tail sheath K11900 - - 3.328e-265 822.0
PJD1_k127_1818_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 596.0
PJD1_k127_1818_6 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K11893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006415 583.0
PJD1_k127_1818_7 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 483.0
PJD1_k127_1818_8 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 455.0
PJD1_k127_1818_9 COGs COG0767 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 440.0
PJD1_k127_1822908_0 HELICc2 K03722 - 3.6.4.12 0.0 1173.0
PJD1_k127_1822908_1 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 345.0
PJD1_k127_1822908_2 fibronectin type III domain protein - - - 0.0007801 47.0
PJD1_k127_1885182_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0 1016.0
PJD1_k127_1885182_1 PFAM iron dependent repressor K03709 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 321.0
PJD1_k127_1885182_2 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000000075 229.0
PJD1_k127_1885182_3 - - - - 0.0000000000000000000000001234 110.0
PJD1_k127_1885357_0 C-terminal, D2-small domain, of ClpB protein K11907 - - 5.57e-308 966.0
PJD1_k127_1885357_1 Phage late control gene D protein (GPD) K11904 - - 1.169e-265 837.0
PJD1_k127_1885357_2 Type VI secretion system, TssF K11896 - - 5.982e-251 786.0
PJD1_k127_1885357_3 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 466.0
PJD1_k127_1885357_4 synthase K00647 - 2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 381.0
PJD1_k127_1885357_5 type VI secretion protein K11895 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 327.0
PJD1_k127_1885357_6 type VI secretion system effector K11903 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004162 275.0
PJD1_k127_1885357_7 Domain of unknown function (DUF4150) - - - 0.0000000000000000000000000000000000000000000000000000000000000000006179 243.0
PJD1_k127_1885357_8 Gene 25-like lysozyme K11897 - - 0.0000000000000000000000000000000000005125 144.0
PJD1_k127_1885357_9 - - - - 0.000000000000000000000000004887 117.0
PJD1_k127_1922912_0 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 596.0
PJD1_k127_1922912_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 518.0
PJD1_k127_1922912_10 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 285.0
PJD1_k127_1922912_11 PFAM ABC transporter related K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000701 283.0
PJD1_k127_1922912_12 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000003877 262.0
PJD1_k127_1922912_13 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000002816 251.0
PJD1_k127_1922912_14 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000001321 167.0
PJD1_k127_1922912_15 - - - - 0.0000000000000342 82.0
PJD1_k127_1922912_2 PFAM glycine cleavage T protein (aminomethyl transferase) K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 485.0
PJD1_k127_1922912_3 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 483.0
PJD1_k127_1922912_4 3'-5' exonuclease K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 422.0
PJD1_k127_1922912_5 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 392.0
PJD1_k127_1922912_6 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 394.0
PJD1_k127_1922912_7 ABC 3 transport family K09816 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 368.0
PJD1_k127_1922912_8 UbiA prenyltransferase family K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 357.0
PJD1_k127_1922912_9 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000843 342.0
PJD1_k127_1966534_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 366.0
PJD1_k127_1966534_1 tRNA wobble cytosine modification - - - 0.000000000000000000000000000000000000000000000000000009997 194.0
PJD1_k127_1972125_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.0 1035.0
PJD1_k127_1972125_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.0 1035.0
PJD1_k127_1972125_10 TIGRFAM hydrogenase expression formation protein HypD K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 554.0
PJD1_k127_1972125_11 AIR synthase related protein, C-terminal domain K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 504.0
PJD1_k127_1972125_12 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 494.0
PJD1_k127_1972125_13 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008715 467.0
PJD1_k127_1972125_14 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 409.0
PJD1_k127_1972125_15 PFAM PHP domain protein K02347,K04477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 337.0
PJD1_k127_1972125_16 TIGRFAM Hydrogenase accessory protein HypB K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 324.0
PJD1_k127_1972125_17 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000002871 247.0
PJD1_k127_1972125_18 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000007489 241.0
PJD1_k127_1972125_19 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000003928 235.0
PJD1_k127_1972125_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1e-322 995.0
PJD1_k127_1972125_20 PFAM thioesterase superfamily protein K07107 - - 0.0000000000000000000000000000000000000000000000000000000000004107 213.0
PJD1_k127_1972125_21 Signal transduction protein - - - 0.000000000000000000000000000000000000000000000000001232 194.0
PJD1_k127_1972125_22 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.0000000000000000000000000000000000000000000000002488 178.0
PJD1_k127_1972125_23 - - - - 0.00000000000000000000000000000000007565 140.0
PJD1_k127_1972125_24 PFAM hydrogenase expression formation protein (HUPF HYPC) K04653 - - 0.000000000000000000000000006229 114.0
PJD1_k127_1972125_25 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000001805 111.0
PJD1_k127_1972125_26 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000000003347 112.0
PJD1_k127_1972125_27 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000000000007219 89.0
PJD1_k127_1972125_28 ADP-ribosylation crystallin J1 - - - 0.0000000000000000156 87.0
PJD1_k127_1972125_3 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.007e-255 792.0
PJD1_k127_1972125_4 Domain of unknown function (DUF4070) - - - 1.49e-230 722.0
PJD1_k127_1972125_5 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 6.275e-205 646.0
PJD1_k127_1972125_6 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 603.0
PJD1_k127_1972125_7 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 605.0
PJD1_k127_1972125_8 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006299 579.0
PJD1_k127_1972125_9 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009309 569.0
PJD1_k127_1992446_0 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 563.0
PJD1_k127_1992446_1 serine threonine protein kinase - - - 0.0000000000000000000001462 104.0
PJD1_k127_1992446_2 Transposase IS200 like - - - 0.0001172 44.0
PJD1_k127_2001056_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1043.0
PJD1_k127_2001056_1 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006034 611.0
PJD1_k127_2001056_10 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000008816 159.0
PJD1_k127_2001056_11 Pfam Response regulator receiver K07658 - - 0.0000000000000000000000000000000000000000187 157.0
PJD1_k127_2001056_12 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000001301 152.0
PJD1_k127_2001056_13 Water Stress and Hypersensitive response - - - 0.00000000000000000000000000000000001096 141.0
PJD1_k127_2001056_14 Diguanylate cyclase - - - 0.0000000000000008382 90.0
PJD1_k127_2001056_15 - - - - 0.0000000001983 65.0
PJD1_k127_2001056_16 Prokaryotic diacylglycerol kinase K00901 - 2.7.1.107 0.000703 42.0
PJD1_k127_2001056_2 Response regulator receiver modulated diguanylate cyclase phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 541.0
PJD1_k127_2001056_3 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006793 473.0
PJD1_k127_2001056_4 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 375.0
PJD1_k127_2001056_5 metal-dependent phosphohydrolase HD region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 376.0
PJD1_k127_2001056_6 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000842 354.0
PJD1_k127_2001056_7 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003401 270.0
PJD1_k127_2001056_8 phosphorelay sensor kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003227 265.0
PJD1_k127_2001056_9 Putative inner membrane exporter, YdcZ K09936 - - 0.000000000000000000000000000000000000000000001019 172.0
PJD1_k127_2070350_0 TIGRFAM amino acid adenylation domain - - - 1.371e-282 891.0
PJD1_k127_2070350_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000002631 84.0
PJD1_k127_2070350_2 Radical SAM K06937 - - 0.000007318 57.0
PJD1_k127_2122803_0 B12 binding domain - - - 1.779e-204 644.0
PJD1_k127_2122803_1 Sigma-70 factor, region 1.1 K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 493.0
PJD1_k127_2122803_2 protein-glutamate methylesterase activity K03412,K03413 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000495 126.0
PJD1_k127_2123360_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007305 327.0
PJD1_k127_2123360_1 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000007893 211.0
PJD1_k127_2123589_0 Fumarase C C-terminus K01744 - 4.3.1.1 2.646e-210 664.0
PJD1_k127_2123589_1 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003798 541.0
PJD1_k127_2123589_10 TIGRFAM hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007383 309.0
PJD1_k127_2123589_11 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000645 234.0
PJD1_k127_2123589_12 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000000000000000001635 221.0
PJD1_k127_2123589_13 PFAM Haloacid dehalogenase domain protein hydrolase K07025 - - 0.000000000000000000000000000000000000000000000000000000000000008272 222.0
PJD1_k127_2123589_14 Protein of unknown function (DUF3426) - - - 0.0000000000000000000000000000000000000000000000000407 198.0
PJD1_k127_2123589_15 PFAM nitrogen-fixing NifU domain protein - - - 0.0000000000000000000000000000000001281 137.0
PJD1_k127_2123589_16 Nitrite and sulphite reductase 4Fe-4S - - - 0.000000000000000000000006397 101.0
PJD1_k127_2123589_2 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009077 519.0
PJD1_k127_2123589_3 TOBE domain K02017,K06857 - 3.6.3.29,3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 526.0
PJD1_k127_2123589_4 Phospholipase D. Active site motifs. K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003416 493.0
PJD1_k127_2123589_5 Bacterial extracellular solute-binding protein K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 412.0
PJD1_k127_2123589_6 PBP superfamily domain K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007325 411.0
PJD1_k127_2123589_7 PFAM UBA THIF-type NAD FAD binding protein K22132 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 409.0
PJD1_k127_2123589_8 Phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 384.0
PJD1_k127_2123589_9 Binding-protein-dependent transport system inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009863 370.0
PJD1_k127_2125531_0 PFAM ATP-binding region - - - 1.218e-210 675.0
PJD1_k127_2125531_1 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007623 567.0
PJD1_k127_2125531_3 response regulator K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000005301 225.0
PJD1_k127_2125531_4 PilZ domain - - - 0.000000000000000000000000000000000005831 139.0
PJD1_k127_2125531_5 protein conserved in bacteria - - - 0.000000000000000000000000001638 115.0
PJD1_k127_2125531_6 Predicted membrane protein (DUF2085) - - - 0.000000000000000000001845 102.0
PJD1_k127_2125531_7 - - - - 0.00000000000000000005928 96.0
PJD1_k127_2125531_8 Domain of unknown function (DUF3362) - - - 0.000695 46.0
PJD1_k127_216048_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1237.0
PJD1_k127_216048_1 Endoribonuclease that initiates mRNA decay K18682 - - 1.272e-263 819.0
PJD1_k127_216048_10 - - - - 0.00000000000000000000009304 100.0
PJD1_k127_216048_11 GDYXXLXY protein - - - 0.0000000000000000000001626 108.0
PJD1_k127_216048_12 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000034 73.0
PJD1_k127_216048_2 SMART Elongator protein 3 MiaB NifB - - - 8.542e-237 744.0
PJD1_k127_216048_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 9.397e-203 636.0
PJD1_k127_216048_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 398.0
PJD1_k127_216048_5 YmdB-like protein K02029,K02030,K09769 GO:0003674,GO:0003824,GO:0004112,GO:0004113,GO:0008081,GO:0016787,GO:0016788,GO:0042578 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009829 311.0
PJD1_k127_216048_6 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000000000000001332 212.0
PJD1_k127_216048_7 Predicted membrane protein (DUF2157) - - - 0.0000000000000000000000000000000000000000000007655 181.0
PJD1_k127_216048_8 Roadblock/LC7 domain - - - 0.0000000000000000000000000000003093 126.0
PJD1_k127_2163343_0 Elongator protein 3, MiaB family, Radical SAM - - - 1.491e-259 803.0
PJD1_k127_2163343_1 ATPases associated with a variety of cellular activities - - - 1.358e-207 659.0
PJD1_k127_2163343_2 TonB C terminal - - - 0.000000000000000000000000000002872 136.0
PJD1_k127_2163343_3 PilZ domain - - - 0.00000002714 59.0
PJD1_k127_2167635_0 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007946 418.0
PJD1_k127_2167635_1 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009867 388.0
PJD1_k127_2167635_10 peroxiredoxin activity K01607,K04756 - 4.1.1.44 0.00000000000000000000000000000000000002642 148.0
PJD1_k127_2167635_11 - - - - 0.000000000004628 76.0
PJD1_k127_2167635_12 PFAM transposase, IS4 family protein K07495 - - 0.0000003431 52.0
PJD1_k127_2167635_13 TIGRFAM alkylhydroperoxidase like protein, AhpD family - - - 0.00001745 50.0
PJD1_k127_2167635_14 PFAM D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00008354 49.0
PJD1_k127_2167635_2 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007611 353.0
PJD1_k127_2167635_3 L-phenylalanine transmembrane transporter activity K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006817 345.0
PJD1_k127_2167635_4 Branched-chain amino acid ATP-binding cassette transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 332.0
PJD1_k127_2167635_5 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000832 270.0
PJD1_k127_2167635_6 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000002851 245.0
PJD1_k127_2167635_7 MerR HTH family regulatory protein - - - 0.00000000000000000000000000000000000000000000000000003145 196.0
PJD1_k127_2167635_8 - - - - 0.000000000000000000000000000000000000000000000002961 192.0
PJD1_k127_2167635_9 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000008581 158.0
PJD1_k127_2170441_0 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 586.0
PJD1_k127_2170441_1 FdhD/NarQ family K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 512.0
PJD1_k127_2170441_10 Transporter major facilitator family protein K08177 - - 0.0003328 44.0
PJD1_k127_2170441_2 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 368.0
PJD1_k127_2170441_3 Inner membrane protein CreD K06143 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 359.0
PJD1_k127_2170441_4 lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000001417 267.0
PJD1_k127_2170441_5 Protein of unknown function (DUF1361) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002259 250.0
PJD1_k127_2170441_6 Universal stress protein family - - - 0.00000000000000000000000000000000000009867 146.0
PJD1_k127_2170441_7 lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.00000000000000000000000001065 122.0
PJD1_k127_2170441_8 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000001932 101.0
PJD1_k127_2170441_9 - - - - 0.00004389 46.0
PJD1_k127_218679_0 Subtilase family - - - 0.0 1016.0
PJD1_k127_218679_1 Elongation factor SelB winged helix 3 K03833 - - 4.171e-295 919.0
PJD1_k127_218679_10 PFAM HipA domain protein K07154 - 2.7.11.1 0.00000000000000000000000000000007675 124.0
PJD1_k127_218679_11 - - - - 0.00000000000000000003708 100.0
PJD1_k127_218679_12 - - - - 0.000000000007406 69.0
PJD1_k127_218679_13 - - - - 0.000000000008344 67.0
PJD1_k127_218679_15 ROK family - - - 0.000003941 55.0
PJD1_k127_218679_16 PFAM aldo keto reductase K05275 - 1.1.1.65 0.000007308 50.0
PJD1_k127_218679_2 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 596.0
PJD1_k127_218679_3 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004486 599.0
PJD1_k127_218679_4 AAA domain (Cdc48 subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 396.0
PJD1_k127_218679_5 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 368.0
PJD1_k127_218679_6 PFAM Rhodanese domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 322.0
PJD1_k127_218679_7 Molybdopterin-guanine dinucleotide biosynthesis K03753 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001479 242.0
PJD1_k127_218679_8 Cupin domain - - - 0.00000000000000000000000000000000000000001423 155.0
PJD1_k127_218679_9 Protein conserved in bacteria - - - 0.00000000000000000000000000000005919 126.0
PJD1_k127_220217_0 Domain of unknown function (DUF4143) K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 576.0
PJD1_k127_220217_1 Bacterial transcriptional activator domain - - - 0.000000005857 58.0
PJD1_k127_2403654_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 8.553e-248 774.0
PJD1_k127_2403654_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 3.755e-226 708.0
PJD1_k127_2403654_2 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 501.0
PJD1_k127_2403654_3 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 482.0
PJD1_k127_2403654_4 Isochorismatase family K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000005772 265.0
PJD1_k127_2421531_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 2.81e-199 627.0
PJD1_k127_2421531_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 466.0
PJD1_k127_2421531_2 PFAM ribonuclease BN K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000633 447.0
PJD1_k127_2421531_3 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 398.0
PJD1_k127_2421531_4 Lipocalin-like domain K03098 - - 0.000000000000000000000000000000000000000000000000000000000000000000795 233.0
PJD1_k127_2421531_5 YtxH-like protein - - - 0.000000000000000000000000000000006109 133.0
PJD1_k127_2421531_6 histidine kinase A domain protein - - - 0.0000000000000000000000002327 111.0
PJD1_k127_2421531_7 Bacterial protein of unknown function (DUF948) - - - 0.0000000000000000000000004554 109.0
PJD1_k127_2421531_8 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000002653 107.0
PJD1_k127_2421531_9 fibronectin type III domain protein - - - 0.00000000003477 64.0
PJD1_k127_2450719_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1518.0
PJD1_k127_2450719_1 glycyl-tRNA aminoacylation K01879 - 6.1.1.14 3.065e-320 992.0
PJD1_k127_2450719_10 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000000000000000000000004987 186.0
PJD1_k127_2450719_11 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000001982 181.0
PJD1_k127_2450719_12 HsdM N-terminal domain K03427 - 2.1.1.72 0.00000000000000000000000000000000000000003507 154.0
PJD1_k127_2450719_13 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000007452 143.0
PJD1_k127_2450719_14 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000001458 145.0
PJD1_k127_2450719_15 PFAM Cold-shock protein, DNA-binding K03704 - - 0.00000000000000000000000000000286 120.0
PJD1_k127_2450719_16 Transcriptional regulator, AbiEi antitoxin, Type IV TA system - - - 0.0000000000000000000000001839 118.0
PJD1_k127_2450719_17 - - - - 0.000000000000000000000003123 113.0
PJD1_k127_2450719_18 PIN domain - - - 0.000000000006371 69.0
PJD1_k127_2450719_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 4.928e-258 807.0
PJD1_k127_2450719_20 - - - - 0.000000002229 61.0
PJD1_k127_2450719_21 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.00000002157 56.0
PJD1_k127_2450719_22 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000003625 52.0
PJD1_k127_2450719_26 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00007093 47.0
PJD1_k127_2450719_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 2.157e-224 700.0
PJD1_k127_2450719_4 PFAM glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 595.0
PJD1_k127_2450719_5 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000541 580.0
PJD1_k127_2450719_6 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007018 372.0
PJD1_k127_2450719_7 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004509 262.0
PJD1_k127_2450719_8 membrane protein involved in the export of O-antigen and teichoic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000001671 239.0
PJD1_k127_2450719_9 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000000000002499 198.0
PJD1_k127_2454776_0 TIGRFAM conjugative coupling factor TraD, SXT TOL subfamily K12071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 488.0
PJD1_k127_2454776_1 F plasmid transfer operon protein K12057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 294.0
PJD1_k127_2454776_12 chlorophyll binding - - - 0.0000000000000001954 87.0
PJD1_k127_2454776_13 Helix-turn-helix XRE-family like proteins - - - 0.00001865 53.0
PJD1_k127_2454776_2 Conjugative relaxosome accessory transposon protein K12072 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003639 284.0
PJD1_k127_2454776_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000007843 212.0
PJD1_k127_2454776_4 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000003139 195.0
PJD1_k127_2454776_5 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000748 175.0
PJD1_k127_2454776_6 PFAM Lytic transglycosylase catalytic - - - 0.00000000000000000000000000000000000000571 154.0
PJD1_k127_2454776_7 - - - - 0.0000000000000000000000000000000000002731 157.0
PJD1_k127_2454776_8 Metal-dependent phosphohydrolase - - - 0.00000000000000000000000000000000009136 149.0
PJD1_k127_2454776_9 Participates in both transcription termination and antitermination - - - 0.0000000000000000000000000000000593 134.0
PJD1_k127_2461074_0 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000005412 231.0
PJD1_k127_2461074_1 - - - - 0.000000000000000000000000000000000000000000001811 169.0
PJD1_k127_2461074_2 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000001873 165.0
PJD1_k127_2461074_3 metal cluster binding K06940 - - 0.0000000000000000000000000000000000000000002505 164.0
PJD1_k127_2461074_4 TIGRFAM addiction module toxin, Txe YoeB family - - - 0.00000000000000000000000000000000006976 134.0
PJD1_k127_2461074_5 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000000000000000000000000001285 125.0
PJD1_k127_2461074_6 protein N-acetylglucosaminyltransferase activity K12600 - - 0.000000000005022 76.0
PJD1_k127_2461074_7 - - - - 0.0004293 46.0
PJD1_k127_2463352_0 CBS domain containing protein K00974 - 2.7.7.72 0.0 1239.0
PJD1_k127_2463352_1 PFAM Rh family protein ammonium transporter K03320 - - 9.047e-219 683.0
PJD1_k127_2463352_10 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000000001442 177.0
PJD1_k127_2463352_11 Domain of unknown function (DUF4349) - - - 0.000000000000000000000001855 116.0
PJD1_k127_2463352_2 Histone deacetylase domain K04768 - - 2.327e-203 638.0
PJD1_k127_2463352_3 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 419.0
PJD1_k127_2463352_4 PFAM MazG nucleotide pyrophosphohydrolase K02499,K04765 - 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 365.0
PJD1_k127_2463352_5 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005191 331.0
PJD1_k127_2463352_6 Histone deacetylase domain K04768 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 322.0
PJD1_k127_2463352_7 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000002587 231.0
PJD1_k127_2463352_8 Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000001031 180.0
PJD1_k127_2463352_9 Protein of unknown function (DUF4231) - - - 0.000000000000000000000000000000000000000000000003197 179.0
PJD1_k127_2492069_0 Isocitrate/isopropylmalate dehydrogenase K00031 GO:0003674,GO:0003824,GO:0003862,GO:0004448,GO:0004450,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006520,GO:0006551,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0022900,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 1.422e-223 700.0
PJD1_k127_2492069_1 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 503.0
PJD1_k127_2492069_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 394.0
PJD1_k127_2492069_3 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 368.0
PJD1_k127_2492069_4 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002 271.0
PJD1_k127_2492069_5 WxcM-like, C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003501 244.0
PJD1_k127_2492069_6 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000004682 237.0
PJD1_k127_2492069_7 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001424 248.0
PJD1_k127_2492069_8 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000001823 236.0
PJD1_k127_2492069_9 glycosyl transferase family 2 K07011 - - 0.000000000000000000000000000000000000000000002239 177.0
PJD1_k127_2559774_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1609.0
PJD1_k127_2559774_1 ATP-binding region, ATPase domain protein domain protein - - - 1.886e-229 757.0
PJD1_k127_2559774_10 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004931 334.0
PJD1_k127_2559774_11 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 317.0
PJD1_k127_2559774_12 Protein of unknown function (DUF4065) - - - 0.000000000000000000000000000000000000000000000000000000000001029 215.0
PJD1_k127_2559774_13 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.000000000000000000000000000000000000000000000001883 175.0
PJD1_k127_2559774_14 Membrane protein implicated in regulation of membrane protease activity - - - 0.00000000000000000000000000000000000006516 147.0
PJD1_k127_2559774_17 amino acid transport K02030 - - 0.000000000000000000000000000001049 142.0
PJD1_k127_2559774_18 NLP P60 protein - - - 0.00000000000000000000000000001021 122.0
PJD1_k127_2559774_19 - - - - 0.00000000000000000000000001663 113.0
PJD1_k127_2559774_2 ATP-binding region, ATPase domain protein domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 589.0
PJD1_k127_2559774_20 Domain of unknown function (DUF4124) - - - 0.00000000000000000000000009287 113.0
PJD1_k127_2559774_21 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000003835 115.0
PJD1_k127_2559774_22 - - - - 0.00000000000000000000005742 103.0
PJD1_k127_2559774_23 PFAM helix-turn-helix domain protein - - - 0.000000000000000000000439 97.0
PJD1_k127_2559774_24 Tautomerase enzyme K01821 - 5.3.2.6 0.000000000002147 69.0
PJD1_k127_2559774_26 - - - - 0.00000007341 54.0
PJD1_k127_2559774_28 COG1846 Transcriptional regulators - - - 0.0004395 45.0
PJD1_k127_2559774_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 528.0
PJD1_k127_2559774_4 Pyridoxal-phosphate dependent enzyme K01738,K01883,K12339 - 2.5.1.47,6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 468.0
PJD1_k127_2559774_5 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 437.0
PJD1_k127_2559774_6 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006408 411.0
PJD1_k127_2559774_7 Zinc dependent phospholipase C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000641 369.0
PJD1_k127_2559774_8 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 361.0
PJD1_k127_2559774_9 ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 353.0
PJD1_k127_2617121_0 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0 1086.0
PJD1_k127_2617121_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0 1072.0
PJD1_k127_2617121_10 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 403.0
PJD1_k127_2617121_11 PFAM tRNA synthetase, class II (D, K and N) K04568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 394.0
PJD1_k127_2617121_12 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 368.0
PJD1_k127_2617121_13 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 346.0
PJD1_k127_2617121_14 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 286.0
PJD1_k127_2617121_15 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000007599 198.0
PJD1_k127_2617121_16 Acyl-ACP thioesterase K01071 - 3.1.2.21 0.000000000000000000000000000000000000000000000000000000213 203.0
PJD1_k127_2617121_17 CRISPR-associated endoribonuclease Cas6 - - - 0.0000000000000000000000000000000000000000000000000000006666 203.0
PJD1_k127_2617121_18 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.000000000000000000000000000000000000000000000000000121 192.0
PJD1_k127_2617121_19 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000000000000000000000000000003385 162.0
PJD1_k127_2617121_2 SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556 K00239 - 1.3.5.1,1.3.5.4 1.794e-286 889.0
PJD1_k127_2617121_20 Cytidylate kinase-like family K00945 - 2.7.4.25 0.00000000000000000000000000000000000000018 157.0
PJD1_k127_2617121_21 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000000000000000002543 143.0
PJD1_k127_2617121_22 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000000698 127.0
PJD1_k127_2617121_23 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000006067 113.0
PJD1_k127_2617121_25 Ribbon-helix-helix protein, copG family - - - 0.00009176 48.0
PJD1_k127_2617121_3 Aldehyde dehydrogenase family K22187 - - 1.748e-224 707.0
PJD1_k127_2617121_4 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 2.325e-208 652.0
PJD1_k127_2617121_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 557.0
PJD1_k127_2617121_6 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004671 549.0
PJD1_k127_2617121_7 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 506.0
PJD1_k127_2617121_8 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 536.0
PJD1_k127_2617121_9 Lysine-2,3-aminomutase K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 476.0
PJD1_k127_2629598_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 2.488e-309 964.0
PJD1_k127_2629598_1 Elongation factor P K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 328.0
PJD1_k127_2629598_2 - - - - 0.000000008543 56.0
PJD1_k127_2642901_0 B12 binding domain - - - 0.0 1050.0
PJD1_k127_2642901_1 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 452.0
PJD1_k127_2642901_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 312.0
PJD1_k127_2642901_3 Putative TM nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001721 238.0
PJD1_k127_2642901_4 PIN domain - - - 0.000000000000000000000000000000000000000000000000000005051 192.0
PJD1_k127_2642901_5 - - - - 0.000000000000000000000000000000000000000000000007977 176.0
PJD1_k127_2642901_7 Protein of unknown function (DUF559) - - - 0.0000000000000000000000000000000000000001983 153.0
PJD1_k127_2642901_8 - - - - 0.000000000000000000000000000009996 121.0
PJD1_k127_2642901_9 SpoVT / AbrB like domain - - - 0.0000000000000000000000000003812 115.0
PJD1_k127_2655957_0 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 503.0
PJD1_k127_2655957_1 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006078 359.0
PJD1_k127_2655957_2 ATP synthase K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001747 265.0
PJD1_k127_2656912_0 Molybdopterin oxidoreductase Fe4S4 domain K00123,K05299 - 1.17.1.10,1.17.1.9 0.0 1294.0
PJD1_k127_2656912_1 TIGRFAM phosphonopyruvate decarboxylase-related protein K15635 - 5.4.2.12 2.604e-222 698.0
PJD1_k127_2656912_10 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009982 398.0
PJD1_k127_2656912_11 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 385.0
PJD1_k127_2656912_12 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 372.0
PJD1_k127_2656912_13 Alpha beta hydrolase K01253,K08253 - 2.7.10.2,3.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 346.0
PJD1_k127_2656912_14 cytidyltransferase-related domain K00952 - 2.7.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009971 316.0
PJD1_k127_2656912_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 312.0
PJD1_k127_2656912_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000001107 220.0
PJD1_k127_2656912_18 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000003444 216.0
PJD1_k127_2656912_19 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000002304 218.0
PJD1_k127_2656912_2 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 560.0
PJD1_k127_2656912_20 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000000000000000000000000000000000000000000000003071 187.0
PJD1_k127_2656912_21 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000004912 167.0
PJD1_k127_2656912_22 - - - - 0.0000000000000000000000000000000000000000000281 169.0
PJD1_k127_2656912_23 YsiA-like protein, C-terminal region - - - 0.0000000000000000000000000000000000000000001599 167.0
PJD1_k127_2656912_24 Sulfurtransferase TusA - - - 0.00000000000000000000000000000000000000002962 160.0
PJD1_k127_2656912_25 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000001329 149.0
PJD1_k127_2656912_26 enzyme binding - - - 0.000000000000000000000000000000000005987 141.0
PJD1_k127_2656912_27 - - - - 0.000000000000000000000000000005664 124.0
PJD1_k127_2656912_28 - - - - 0.00000000000000000000000000007267 119.0
PJD1_k127_2656912_29 Belongs to the sulfur carrier protein TusA family - - - 0.00000000000000003621 93.0
PJD1_k127_2656912_3 VWA containing CoxE family protein K09989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 553.0
PJD1_k127_2656912_30 Putative transposase - - - 0.00000000000000007795 81.0
PJD1_k127_2656912_31 - - - - 0.00000000000005273 79.0
PJD1_k127_2656912_33 PFAM Methyltransferase type K15256 - - 0.0000004548 53.0
PJD1_k127_2656912_4 Transposase DDE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008877 523.0
PJD1_k127_2656912_5 AAA domain (dynein-related subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 487.0
PJD1_k127_2656912_6 Putative MetA-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 440.0
PJD1_k127_2656912_7 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 414.0
PJD1_k127_2656912_8 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 400.0
PJD1_k127_2656912_9 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 395.0
PJD1_k127_2662796_0 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769 2.6.1.83 1.588e-246 764.0
PJD1_k127_2662796_1 PFAM fumarate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 8.282e-243 755.0
PJD1_k127_2662796_10 Fibronectin type 3 domain - - - 0.000000000000000000000000000000000000000000000000000000000000834 218.0
PJD1_k127_2662796_11 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000001125 188.0
PJD1_k127_2662796_12 FxsA cytoplasmic membrane protein K07113 - - 0.00000000000000000000000000000000000000000004496 163.0
PJD1_k127_2662796_13 - - - - 0.00000000000000000000000000000000000009869 149.0
PJD1_k127_2662796_2 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 1.343e-239 743.0
PJD1_k127_2662796_3 Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 3.692e-226 704.0
PJD1_k127_2662796_4 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 2.604e-222 698.0
PJD1_k127_2662796_5 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 499.0
PJD1_k127_2662796_6 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 493.0
PJD1_k127_2662796_7 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005475 436.0
PJD1_k127_2662796_8 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005292 299.0
PJD1_k127_2662796_9 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000002595 254.0
PJD1_k127_2699769_0 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000001672 168.0
PJD1_k127_2755995_0 metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006873 298.0
PJD1_k127_2755995_1 Phosphoesterase K07095 - - 0.000000000000000000000000000000000000000000000000007204 184.0
PJD1_k127_2755995_2 - - - - 0.0000000000000000000000000000004738 131.0
PJD1_k127_2755995_3 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000009181 101.0
PJD1_k127_2796385_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 3.438e-307 951.0
PJD1_k127_2796385_1 virion core protein, lumpy skin disease virus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 366.0
PJD1_k127_2796385_2 Tim44 K15539 - - 0.000000000000000000000000000000000000000000000000000000001182 219.0
PJD1_k127_2796385_3 ORF6N domain - - - 0.00000000000000000000000000000000000000000000000007778 182.0
PJD1_k127_2796385_4 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000006659 139.0
PJD1_k127_2796385_5 deoxyhypusine monooxygenase activity K00525,K09940 - 1.17.4.1 0.00000001463 66.0
PJD1_k127_2796385_6 PFAM Resolvase - - - 0.00005936 47.0
PJD1_k127_2832035_0 SMART Elongator protein 3 MiaB NifB - - - 2.394e-235 734.0
PJD1_k127_2832035_1 Transport of potassium into the cell K03549 - - 1.529e-224 715.0
PJD1_k127_2832035_2 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 448.0
PJD1_k127_2832035_3 ribonuclease BN - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001117 264.0
PJD1_k127_2832035_5 sulfuric ester hydrolase activity K03760,K19353 - 2.7.8.43 0.0000000000000000000000000000000000000000001348 179.0
PJD1_k127_2855121_0 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 529.0
PJD1_k127_2855121_1 sensor diguanylate cyclase phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 524.0
PJD1_k127_2855121_10 - - - - 0.00000000000001171 79.0
PJD1_k127_2855121_11 PQ loop repeat - - - 0.00000000000004881 75.0
PJD1_k127_2855121_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 365.0
PJD1_k127_2855121_3 Cyclodipeptide synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001124 274.0
PJD1_k127_2855121_4 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000001168 282.0
PJD1_k127_2855121_5 Putative molybdenum carrier - - - 0.000000000000000000000000000000000000000000000001596 178.0
PJD1_k127_2855121_6 - - - - 0.000000000000000000000000002203 119.0
PJD1_k127_2855121_7 Uncharacterized protein conserved in bacteria (DUF2314) - - - 0.0000000000000000000000002627 111.0
PJD1_k127_2855121_8 methyltransferase - - - 0.000000000000000000000001494 120.0
PJD1_k127_2857595_0 glycosyltransferase 36 associated K00702,K13688 - 2.4.1.20 0.0 1309.0
PJD1_k127_2857595_1 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 3.723e-212 667.0
PJD1_k127_2857595_2 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000000000000008548 136.0
PJD1_k127_2857595_3 - - - - 0.000000000000000000000004107 104.0
PJD1_k127_2858509_0 Protein export membrane protein K07003 - - 0.0 1030.0
PJD1_k127_2858509_1 WYL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 475.0
PJD1_k127_2858509_2 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 422.0
PJD1_k127_2858509_3 GH3 auxin-responsive promoter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 431.0
PJD1_k127_2858509_4 Outer membrane lipoprotein LolB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002327 254.0
PJD1_k127_2858509_5 - - - - 0.00000000000000000000000000000000000000000000000000000009192 206.0
PJD1_k127_2858509_6 Doxx family K15977 - - 0.00000000000000000000000000000003663 130.0
PJD1_k127_2858509_7 UvrD-like helicase C-terminal domain - - - 0.000000000000000000000000000002671 119.0
PJD1_k127_292523_0 Histidine kinase A domain protein - - - 5.138e-224 736.0
PJD1_k127_292523_1 Trypsin-like peptidase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009415 564.0
PJD1_k127_292523_10 Cro/C1-type HTH DNA-binding domain - - - 0.0000001267 58.0
PJD1_k127_292523_11 - - - - 0.00003064 52.0
PJD1_k127_292523_12 - - - - 0.0001362 52.0
PJD1_k127_292523_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 567.0
PJD1_k127_292523_3 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 349.0
PJD1_k127_292523_4 Protein of unknown function (DUF3142) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007663 290.0
PJD1_k127_292523_5 SMART helix-turn-helix domain protein K18831 - - 0.000000000000000000000000000000000000000000000000000000000004414 209.0
PJD1_k127_292523_7 - - - - 0.000000000000003214 79.0
PJD1_k127_292523_8 PFAM Phage derived protein Gp49-like (DUF891) - - - 0.00000000000002026 78.0
PJD1_k127_295552_0 PFAM peptidase S1 and S6, chymotrypsin Hap K04771,K04772 - 3.4.21.107 2.309e-196 624.0
PJD1_k127_295552_1 SMART Elongator protein 3 MiaB NifB K07139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 465.0
PJD1_k127_295552_2 nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 313.0
PJD1_k127_295552_3 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334,K05586 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000001703 218.0
PJD1_k127_295552_4 SPFH domain / Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000006656 201.0
PJD1_k127_295552_5 Zinc dependent phospholipase C - - - 0.0000000000000000000000000000000000000000001217 172.0
PJD1_k127_295552_6 - - - - 0.0000000000000000000000000000000000007536 140.0
PJD1_k127_295552_7 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00124,K00335,K05587 - 1.6.5.3 0.00000000000000000000000000257 121.0
PJD1_k127_295552_8 sodium-dependent phosphate transmembrane transporter activity - - - 0.00000001604 63.0
PJD1_k127_2986590_0 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second K01958 - 6.4.1.1 0.0 1939.0
PJD1_k127_2986590_1 response regulator - - - 4.19e-212 668.0
PJD1_k127_2986590_10 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 411.0
PJD1_k127_2986590_11 Binding-protein-dependent transport system inner membrane component K02047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006647 412.0
PJD1_k127_2986590_12 SurA N-terminal domain K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000618 332.0
PJD1_k127_2986590_13 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 325.0
PJD1_k127_2986590_15 protein conserved in bacteria - - - 0.0002762 46.0
PJD1_k127_2986590_2 PFAM Cys Met metabolism pyridoxal-phosphate-dependent K01739,K01760 - 2.5.1.48,4.4.1.8 8.482e-198 624.0
PJD1_k127_2986590_3 Cys Met metabolism K01760 - 4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 608.0
PJD1_k127_2986590_4 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 538.0
PJD1_k127_2986590_5 Elongator protein 3, MiaB family, Radical SAM K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 520.0
PJD1_k127_2986590_6 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007866 504.0
PJD1_k127_2986590_7 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 498.0
PJD1_k127_2986590_8 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 458.0
PJD1_k127_2986590_9 Binding-protein-dependent transport system inner membrane component K02046 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 423.0
PJD1_k127_3000575_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1599.0
PJD1_k127_3000575_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 2.866e-264 818.0
PJD1_k127_3000575_10 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009917 301.0
PJD1_k127_3000575_11 Putative zinc- or iron-chelating domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005667 286.0
PJD1_k127_3000575_12 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000004936 101.0
PJD1_k127_3000575_13 cell adhesion involved in biofilm formation - - - 0.000000000000000001269 96.0
PJD1_k127_3000575_14 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000009679 57.0
PJD1_k127_3000575_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.668e-238 741.0
PJD1_k127_3000575_3 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 1.062e-216 677.0
PJD1_k127_3000575_4 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 8.084e-197 617.0
PJD1_k127_3000575_5 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 527.0
PJD1_k127_3000575_6 CobB/CobQ-like glutamine amidotransferase domain K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000471 448.0
PJD1_k127_3000575_7 PFAM MscS Mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 390.0
PJD1_k127_3000575_8 beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005218 354.0
PJD1_k127_3000575_9 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009211 346.0
PJD1_k127_302423_0 von Willebrand factor, type A K07114 - - 6.429e-299 930.0
PJD1_k127_302423_1 SMART Elongator protein 3 MiaB NifB - - - 1.697e-270 837.0
PJD1_k127_302423_2 Histidine kinase K07641,K14980 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 509.0
PJD1_k127_302423_3 PFAM YdjC family protein K03478 - 3.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 383.0
PJD1_k127_302423_4 response regulator K02483,K07663 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003333 366.0
PJD1_k127_302423_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000005445 206.0
PJD1_k127_302423_6 Sugar transferase K19428 - - 0.00000000000000000000000000000000000000000000000000004353 197.0
PJD1_k127_302423_7 PFAM purine or other phosphorylase family 1 K01243 - 3.2.2.9 0.0000000000000000000000000000000000000000000005205 175.0
PJD1_k127_30479_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.0 1127.0
PJD1_k127_30479_1 ATP-binding region ATPase domain protein - - - 0.0 1058.0
PJD1_k127_30479_10 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 455.0
PJD1_k127_30479_11 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 438.0
PJD1_k127_30479_12 Domains LysM, LysM, NLPC_P60 K19223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 361.0
PJD1_k127_30479_13 PFAM NUDIX hydrolase K03426 - 3.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 334.0
PJD1_k127_30479_14 PFAM LemA family protein K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 327.0
PJD1_k127_30479_15 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 321.0
PJD1_k127_30479_16 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 316.0
PJD1_k127_30479_17 Penicillin binding protein transpeptidase domain K17838 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 299.0
PJD1_k127_30479_18 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 292.0
PJD1_k127_30479_19 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00177 - 1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000217 280.0
PJD1_k127_30479_2 LUD domain - - - 7.047e-320 992.0
PJD1_k127_30479_20 Membrane protein, UPF0016 and UPF0016 domain-containing - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002427 242.0
PJD1_k127_30479_21 Pfam:TPM K08988 - - 0.000000000000000000000000000000000000000000000000000000000000000000005122 241.0
PJD1_k127_30479_22 PFAM CHAD domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001577 235.0
PJD1_k127_30479_23 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000005756 186.0
PJD1_k127_30479_24 PFAM DivIVA family protein K04074 - - 0.000000000000000000000000000000000000000000000000003863 186.0
PJD1_k127_30479_25 IMP dehydrogenase activity K07182 - - 0.000000000000000000000000000000000000000000000001407 177.0
PJD1_k127_30479_26 Putative heavy-metal-binding - - - 0.00000000000000000000000000000000000000001554 157.0
PJD1_k127_30479_27 Belongs to the UPF0260 family K09160 - - 0.000000000000000000000000000000000000001579 150.0
PJD1_k127_30479_28 Pfam:DUF162 K00782 - - 0.000000000000000000000000000000000001748 144.0
PJD1_k127_30479_29 Helix-hairpin-helix domain - - - 0.00000000000000000000000000000000008588 139.0
PJD1_k127_30479_3 MreB/Mbl protein K04045 - - 3.895e-238 748.0
PJD1_k127_30479_30 4Fe-4S dicluster domain K00176 - 1.2.7.3 0.00000000000000000000000000001263 118.0
PJD1_k127_30479_31 DUF167 K09131 - - 0.0000000000000000000000000000339 119.0
PJD1_k127_30479_32 Putative regulatory protein - - - 0.0000000000000000000000000001148 117.0
PJD1_k127_30479_33 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.00000000000000000000000009263 108.0
PJD1_k127_30479_34 YGGT family K02221 - - 0.000000000000000000000002182 105.0
PJD1_k127_30479_35 protein with SCP PR1 domains - - - 0.00000000000000000001426 98.0
PJD1_k127_30479_36 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000001823 93.0
PJD1_k127_30479_37 - - - - 0.00000000000000003031 85.0
PJD1_k127_30479_39 - - - - 0.000000003993 67.0
PJD1_k127_30479_4 metal-dependent phosphohydrolase, HD sub domain K01524 - 3.6.1.11,3.6.1.40 5.223e-212 670.0
PJD1_k127_30479_5 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 4.952e-202 634.0
PJD1_k127_30479_6 Anaphase-promoting complex, cyclosome, subunit 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008651 525.0
PJD1_k127_30479_7 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 502.0
PJD1_k127_30479_8 PFAM thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007367 488.0
PJD1_k127_30479_9 Nucleotidyl transferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 489.0
PJD1_k127_3086794_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 539.0
PJD1_k127_3086794_1 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000656 402.0
PJD1_k127_3086794_2 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 368.0
PJD1_k127_3086794_3 Iron-sulfur cluster-binding domain K06871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001476 289.0
PJD1_k127_3086794_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000003986 128.0
PJD1_k127_3086794_5 Histidine kinase - - - 0.00000000000000000006546 95.0
PJD1_k127_3086794_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000002915 85.0
PJD1_k127_3086794_8 Histidine kinase - - - 0.000000000003232 69.0
PJD1_k127_3130906_0 May be involved in recombinational repair of damaged DNA K03631 - - 1.644e-196 627.0
PJD1_k127_3130906_1 Peptidase U62 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 541.0
PJD1_k127_3130906_2 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 487.0
PJD1_k127_3130906_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 364.0
PJD1_k127_3130906_4 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000003491 252.0
PJD1_k127_3130906_5 Belongs to the aconitase IPM isomerase family K01682 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009060,GO:0009062,GO:0009987,GO:0015980,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0032787,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0045333,GO:0046395,GO:0046459,GO:0047456,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072329,GO:0072350,GO:0097159,GO:1901363,GO:1901575 4.2.1.3,4.2.1.99 0.0000000000007132 74.0
PJD1_k127_3183447_0 glycosyltransferase 36 associated K00702,K13688 - 2.4.1.20 0.0 3019.0
PJD1_k127_3183447_1 Receptor family ligand binding region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 547.0
PJD1_k127_3183447_2 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 541.0
PJD1_k127_3183447_3 leucine import across plasma membrane K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 396.0
PJD1_k127_3183447_4 PFAM RNP-1 like RNA-binding protein - - - 0.0000001146 59.0
PJD1_k127_3199645_0 histidine kinase A domain protein domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 487.0
PJD1_k127_3199645_1 choline dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000005979 192.0
PJD1_k127_323870_0 3-demethylubiquinone-9 3-O-methyltransferase activity K00568,K18827 - 2.1.1.222,2.1.1.294,2.1.1.64,2.7.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 426.0
PJD1_k127_323870_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 394.0
PJD1_k127_323870_2 ADP-ribosylglycohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009237 299.0
PJD1_k127_323870_4 Domain of unknown function (DUF4468) with TBP-like fold - - - 0.0000000007279 67.0
PJD1_k127_3248366_0 NUBPL iron-transfer P-loop NTPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251 565.0
PJD1_k127_3248366_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 557.0
PJD1_k127_3248366_2 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 462.0
PJD1_k127_3248366_3 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 445.0
PJD1_k127_3248366_4 Divergent polysaccharide deacetylase K09798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003542 284.0
PJD1_k127_3248366_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000000000001212 107.0
PJD1_k127_3248366_6 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.00000000000000000000128 96.0
PJD1_k127_3249498_0 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 388.0
PJD1_k127_3249498_1 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000000000003488 181.0
PJD1_k127_3249498_2 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.0000000000004742 77.0
PJD1_k127_3249498_3 Rhodanese Homology Domain - - - 0.0000000002228 71.0
PJD1_k127_3249498_4 Domain of unknown function - - - 0.00000002048 67.0
PJD1_k127_325662_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0 1108.0
PJD1_k127_325662_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 368.0
PJD1_k127_325662_2 mRNA catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006389 256.0
PJD1_k127_325662_3 4Fe-4S binding domain K00176 - 1.2.7.3 0.00000000000000001709 85.0
PJD1_k127_325662_4 YHS domain - - - 0.0000000000000001544 83.0
PJD1_k127_3269620_0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 3.408e-224 704.0
PJD1_k127_3269620_1 NADH Ubiquinone plastoquinone (Complex I) K12141 - - 2.672e-197 627.0
PJD1_k127_3269620_10 Helix-turn-helix domain K02806 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 297.0
PJD1_k127_3269620_11 GPR1/FUN34/yaaH family K07034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006289 282.0
PJD1_k127_3269620_12 hydrogenase 4 membrane K12140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000164 248.0
PJD1_k127_3269620_13 PFAM NADH Ubiquinone - - - 0.0000000000000000000000000000000000000000000000000000000000000006851 226.0
PJD1_k127_3269620_14 Hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000000000000000000000001351 186.0
PJD1_k127_3269620_15 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.000004639 51.0
PJD1_k127_3269620_16 Transporter major facilitator family protein K08177 - - 0.0003328 44.0
PJD1_k127_3269620_2 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K05568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006782 617.0
PJD1_k127_3269620_3 Proton-conducting membrane transporter K12137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 575.0
PJD1_k127_3269620_4 plastoquinone (Complex I) K12141 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009989 511.0
PJD1_k127_3269620_5 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 499.0
PJD1_k127_3269620_6 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 384.0
PJD1_k127_3269620_7 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 339.0
PJD1_k127_3269620_8 Formate hydrogenlyase subunit 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 335.0
PJD1_k127_3269620_9 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007003 301.0
PJD1_k127_3285453_0 FIST N domain - - - 0.00000000000000000000000000000000000000000000000000003863 190.0
PJD1_k127_3285453_1 - - - - 0.00000000000000000000000000000004561 133.0
PJD1_k127_3285453_2 - - - - 0.0000000000000001643 81.0
PJD1_k127_3285453_3 - - - - 0.000005166 48.0
PJD1_k127_3298790_0 PFAM alpha amylase catalytic region - - - 0.0 1225.0
PJD1_k127_3298790_1 Phosphofructokinase K00895,K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 479.0
PJD1_k127_3298790_11 - - - - 0.0000000000000000000000000004292 118.0
PJD1_k127_3298790_12 ThiS family - - - 0.000000000000000000000002671 104.0
PJD1_k127_3298790_13 - - - - 0.0000000000000000004866 91.0
PJD1_k127_3298790_14 - - - - 0.00000000000004781 77.0
PJD1_k127_3298790_2 ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006886 440.0
PJD1_k127_3298790_3 ThiF family K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 352.0
PJD1_k127_3298790_4 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004921 258.0
PJD1_k127_3298790_5 Sel1-like repeats. K07126 - - 0.000000000000000000000000000000000000000000000000000000000002914 216.0
PJD1_k127_3298790_6 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000181 170.0
PJD1_k127_3298790_7 - - - - 0.0000000000000000000000000000000000000000001618 169.0
PJD1_k127_3298790_8 Dirigent-like protein - - - 0.00000000000000000000000000000000000004982 148.0
PJD1_k127_3298790_9 Dirigent-like protein - - - 0.0000000000000000000000000000000001665 141.0
PJD1_k127_330518_0 F pilus assembly Type-IV secretion system for plasmid transfer K12063 - - 1.304e-268 850.0
PJD1_k127_330518_1 Type-1V conjugative transfer system mating pair stabilisation K12058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 501.0
PJD1_k127_330518_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 460.0
PJD1_k127_330518_3 PFAM TraB pilus assembly family protein K12065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 326.0
PJD1_k127_330518_4 TraK protein K12066 - - 0.000000000000000000000000000000000000000000000000000000000000000001079 241.0
PJD1_k127_330518_5 TraE protein K12067 - - 0.000000000000000000000000000000000000001954 154.0
PJD1_k127_330518_6 Type IV conjugative transfer system lipoprotein (TraV) K12064 - - 0.0000000000000000000000000000000000001952 146.0
PJD1_k127_3337727_0 L,D-transpeptidase catalytic domain K16291 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 611.0
PJD1_k127_3337727_1 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 427.0
PJD1_k127_3337727_2 Uncharacterized protein conserved in bacteria (DUF2219) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 377.0
PJD1_k127_3337727_3 Alanine-zipper, major outer membrane lipoprotein - - - 0.0000000000000000000000000965 109.0
PJD1_k127_3375829_0 Dimerisation domain of Zinc Transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 393.0
PJD1_k127_3375829_1 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002849 233.0
PJD1_k127_3375829_2 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000001181 223.0
PJD1_k127_3375829_3 - - - - 0.000000000000000000000000000000000000000000001214 170.0
PJD1_k127_3375829_5 - - - - 0.00000000000000003682 86.0
PJD1_k127_3375829_6 - - - - 0.0000002055 54.0
PJD1_k127_3407822_0 Polyphosphate kinase 2 (PPK2) - - - 2.525e-237 742.0
PJD1_k127_3407822_1 Iron-containing alcohol dehydrogenase - - - 6.562e-208 652.0
PJD1_k127_3407822_10 Domain of unknown function (DUF1858) - - - 0.0000000000000000001113 90.0
PJD1_k127_3407822_2 PFAM aminotransferase, class I and II K00812 - 2.6.1.1 2.31e-202 636.0
PJD1_k127_3407822_3 Belongs to the dGTPase family. Type 2 subfamily K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 592.0
PJD1_k127_3407822_4 fructose-bisphosphate aldolase activity K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 512.0
PJD1_k127_3407822_5 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 466.0
PJD1_k127_3407822_6 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000000003286 237.0
PJD1_k127_3407822_7 Pfam:Methyltransf_26 K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000000000921 193.0
PJD1_k127_3407822_8 Filamentation induced by cAMP protein fic - - - 0.000000000000000000000000000000000001139 139.0
PJD1_k127_3407822_9 nuclear chromosome segregation - - - 0.00000000000000000000000007244 123.0
PJD1_k127_3416241_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006158 325.0
PJD1_k127_3416241_2 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000008318 126.0
PJD1_k127_3416241_4 - - - - 0.00000000000000000000007326 100.0
PJD1_k127_3416241_5 - - - - 0.00000000000000002828 84.0
PJD1_k127_3430147_0 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 2.5e-209 668.0
PJD1_k127_3430147_1 metal-dependent phosphohydrolase HD region K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009508 567.0
PJD1_k127_3430147_2 histidine kinase A domain protein domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 478.0
PJD1_k127_3430147_3 amidohydrolase - - - 0.000000000000000000000000000000000000000009853 161.0
PJD1_k127_3430147_4 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000007923 49.0
PJD1_k127_3446085_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1374.0
PJD1_k127_3446085_1 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 9.016e-219 686.0
PJD1_k127_3446085_2 Belongs to the glycosyl hydrolase 31 family K01187,K01811,K18820 GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016758,GO:0033825,GO:0046527 2.4.1.161,3.2.1.177,3.2.1.20 6.06e-214 674.0
PJD1_k127_3446085_3 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 2.976e-205 648.0
PJD1_k127_3446085_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007847 577.0
PJD1_k127_3446085_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 567.0
PJD1_k127_3446085_6 4Fe-4S dicluster domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 557.0
PJD1_k127_3446085_7 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 291.0
PJD1_k127_3446085_8 curli production assembly transport component CsgG - - - 0.0000000000000000000000000000000000000000000001802 182.0
PJD1_k127_3543363_0 Acyl transferase domain - - - 0.0 3709.0
PJD1_k127_3543363_1 malto-oligosyltrehalose synthase K06044 - 5.4.99.15 0.0 1115.0
PJD1_k127_3543363_10 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 558.0
PJD1_k127_3543363_11 NAD(P)H-binding K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 537.0
PJD1_k127_3543363_12 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 536.0
PJD1_k127_3543363_13 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 494.0
PJD1_k127_3543363_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 422.0
PJD1_k127_3543363_15 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 402.0
PJD1_k127_3543363_16 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 397.0
PJD1_k127_3543363_17 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses K01916,K01950 - 6.3.1.5,6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 330.0
PJD1_k127_3543363_18 bacterial OsmY and nodulation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 288.0
PJD1_k127_3543363_19 lysine biosynthetic process via aminoadipic acid K00997,K06133 - 2.7.8.7 0.000000000000000000000000000000000000000000000000000000000000000000002196 246.0
PJD1_k127_3543363_2 Belongs to the glycosyl hydrolase 57 family - - - 0.0 1108.0
PJD1_k127_3543363_20 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000000000003857 218.0
PJD1_k127_3543363_22 Membrane - - - 0.000000000000000000000000000000000000000000000000000000006604 207.0
PJD1_k127_3543363_23 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000002991 166.0
PJD1_k127_3543363_24 Rubrerythrin - - - 0.00000000000000000000000000000000417 135.0
PJD1_k127_3543363_25 - - - - 0.0000000000000000000000132 102.0
PJD1_k127_3543363_26 Protein of unknown function (DUF3309) - - - 0.00000000000000000003723 91.0
PJD1_k127_3543363_27 CsbD-like - - - 0.00000000000000000008151 90.0
PJD1_k127_3543363_28 - - - - 0.0000000000000002255 79.0
PJD1_k127_3543363_29 - - - - 0.0000000000000007041 80.0
PJD1_k127_3543363_30 - - - - 0.00000000001677 66.0
PJD1_k127_3543363_31 - - - - 0.00008354 49.0
PJD1_k127_3543363_32 membrane - - - 0.000171 44.0
PJD1_k127_3543363_4 Glycogen debranching enzyme N terminal - - - 0.0 1033.0
PJD1_k127_3543363_5 Domain of unknown function (DUF3459) K01236 - 3.2.1.141 0.0 1014.0
PJD1_k127_3543363_6 Domain of unknown function (DUF4070) - - - 3.314e-269 835.0
PJD1_k127_3543363_7 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 1.706e-228 712.0
PJD1_k127_3543363_8 acetyltransferase - - - 3.759e-197 621.0
PJD1_k127_3543363_9 acetyltransferase - - - 1.162e-196 617.0
PJD1_k127_3548555_0 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008576 240.0
PJD1_k127_3570471_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.683e-215 676.0
PJD1_k127_3570471_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007914 237.0
PJD1_k127_3570471_2 ATP synthase, Delta/Epsilon chain, beta-sandwich domain K02114 - - 0.00000000000000000362 84.0
PJD1_k127_3618731_0 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 401.0
PJD1_k127_3618731_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 297.0
PJD1_k127_3618731_2 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000009259 258.0
PJD1_k127_3618731_3 TIGRFAM addiction module antidote protein, HigA family K21498 - - 0.00000000000000000000000000000000000000000001953 163.0
PJD1_k127_3618731_4 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.00000000000000000000000000000000000000000006443 164.0
PJD1_k127_3618731_5 haloacid dehalogenase-like hydrolase K07026 - 3.1.3.70 0.00000000000000000000000000000000000001868 148.0
PJD1_k127_3618731_6 Protein conserved in bacteria - - - 0.000002107 52.0
PJD1_k127_3649564_0 Catalyzes the conversion of aminoimidazole ribotide (AIR) to 5-hydroxybenzimidazole (5-HBI) in a radical S-adenosyl-L- methionine (SAM)-dependent reaction. Is thus involved in the anaerobic biosynthesis of the benzimidazole lower axial ligand of the cobamide produced by K22466 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.23 2.197e-257 796.0
PJD1_k127_3649564_1 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 594.0
PJD1_k127_3649564_2 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 445.0
PJD1_k127_3649564_3 Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import K02007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009687 346.0
PJD1_k127_3649564_4 PFAM Precorrin-8X methylmutase CbiC CobH K06042 - 5.4.99.60,5.4.99.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004777 312.0
PJD1_k127_3649564_5 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000134 282.0
PJD1_k127_3649564_6 PFAM cobalamin (vitamin B12) biosynthesis CbiX protein K03795 - 4.99.1.3 0.0000000000000000000000000000000000000000000000000000000006501 203.0
PJD1_k127_3649564_7 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A K02188 - 2.1.1.195 0.00000000000000000000000000000000000000000002106 167.0
PJD1_k127_3649564_8 Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import K02007 - - 0.0000000000000000000000000006929 116.0
PJD1_k127_3650728_0 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005184 323.0
PJD1_k127_3650728_1 Domain of unknown function(DUF2779) - - - 0.00000000002966 64.0
PJD1_k127_3650728_2 RES - - - 0.00000001061 64.0
PJD1_k127_3650728_3 Protein of unknown function (DUF2384) - - - 0.0000007324 60.0
PJD1_k127_3661793_0 depolymerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 614.0
PJD1_k127_3661793_1 depolymerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 591.0
PJD1_k127_3661793_2 phospholipase Carboxylesterase - - - 0.00000000001318 70.0
PJD1_k127_3665655_0 phospholipid glycerol acyltransferase K05939 - 2.3.1.40,6.2.1.20 0.0 1718.0
PJD1_k127_3665655_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 551.0
PJD1_k127_3665655_10 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000008231 152.0
PJD1_k127_3665655_11 PIN domain - - - 0.000000000000000000000000000000000000001275 155.0
PJD1_k127_3665655_12 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.0000000000000000000000000000000000002331 145.0
PJD1_k127_3665655_13 - - - - 0.00000000000000000000000000000000001071 142.0
PJD1_k127_3665655_14 - - - - 0.000000000000000000000000000000001391 131.0
PJD1_k127_3665655_15 AbrB family - - - 0.000000000000000000000000000001862 122.0
PJD1_k127_3665655_17 PAP2 superfamily - - - 0.000006607 56.0
PJD1_k127_3665655_18 addiction module component, TIGR02574 family - - - 0.00007549 48.0
PJD1_k127_3665655_2 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009911 539.0
PJD1_k127_3665655_3 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006361 467.0
PJD1_k127_3665655_4 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008791 443.0
PJD1_k127_3665655_5 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005814 397.0
PJD1_k127_3665655_6 Amidohydrolase K01686 - 4.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 325.0
PJD1_k127_3665655_7 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032991,GO:0032993,GO:0033554,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001814 278.0
PJD1_k127_3665655_8 - - - - 0.0000000000000000000000000000000000000000000000000000006929 195.0
PJD1_k127_3665655_9 - - - - 0.00000000000000000000000000000000000000000000000004764 194.0
PJD1_k127_366826_0 elongation factor Tu domain 2 protein K02355 - - 0.0 1180.0
PJD1_k127_366826_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1092.0
PJD1_k127_366826_10 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 400.0
PJD1_k127_366826_11 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 385.0
PJD1_k127_366826_12 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 361.0
PJD1_k127_366826_13 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 353.0
PJD1_k127_366826_14 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K01142,K10773 - 3.1.11.2,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009838 347.0
PJD1_k127_366826_15 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003441 343.0
PJD1_k127_366826_16 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 342.0
PJD1_k127_366826_17 TIGRFAM cell division ATP-binding protein FtsE K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 317.0
PJD1_k127_366826_18 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000003041 265.0
PJD1_k127_366826_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001818 269.0
PJD1_k127_366826_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 6.424e-247 765.0
PJD1_k127_366826_20 MgtC family K07507 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008662 252.0
PJD1_k127_366826_21 Dual specificity phosphatase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000001824 222.0
PJD1_k127_366826_22 PFAM ROSMUCR transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000007106 208.0
PJD1_k127_366826_23 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000000000000000000000000000000000004568 211.0
PJD1_k127_366826_24 PFAM Sporulation domain protein - - - 0.000000000000000000000002334 117.0
PJD1_k127_366826_25 4Fe-4S binding domain K00176 - 1.2.7.3 0.00000000000000000000001888 100.0
PJD1_k127_366826_26 Glycosyltransferase Family 4 - - - 0.000000000000000006451 85.0
PJD1_k127_366826_28 - - - - 0.0000000000103 69.0
PJD1_k127_366826_3 tail specific protease K03797 - 3.4.21.102 1.367e-205 647.0
PJD1_k127_366826_31 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000005263 51.0
PJD1_k127_366826_34 - - - - 0.00004116 48.0
PJD1_k127_366826_4 von Willebrand factor, type A K07114 - - 7.268e-198 630.0
PJD1_k127_366826_5 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 557.0
PJD1_k127_366826_6 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004192 449.0
PJD1_k127_366826_7 Peptidase family M23 K21471 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 445.0
PJD1_k127_366826_8 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 422.0
PJD1_k127_366826_9 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005031 404.0
PJD1_k127_3710025_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1846.0
PJD1_k127_3710025_1 hydrogenase large subunit K00336,K06441,K18332 - 1.12.1.3,1.12.7.2,1.6.5.3 0.0 1019.0
PJD1_k127_3710025_10 - - - - 0.0000000000000000000000000000000000000000000000000000001764 199.0
PJD1_k127_3710025_11 Ferredoxin K17992 - 1.12.1.3 0.0000000000000000000000000000000000000000000000000002526 187.0
PJD1_k127_3710025_2 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335,K18331 - 1.12.1.3,1.6.5.3 1.113e-278 861.0
PJD1_k127_3710025_3 Biotin and Thiamin Synthesis associated K03150 - 4.1.99.19 1.159e-251 786.0
PJD1_k127_3710025_4 Fumarase C C-terminus K01744 - 4.3.1.1 8.431e-235 733.0
PJD1_k127_3710025_5 Ferrous iron transport protein B - - - 3.929e-217 677.0
PJD1_k127_3710025_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 8.489e-209 657.0
PJD1_k127_3710025_7 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007625 535.0
PJD1_k127_3710025_8 Elongator protein 3, MiaB family, Radical SAM K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007277 458.0
PJD1_k127_3710025_9 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K18330 - 1.12.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 295.0
PJD1_k127_3727500_0 Helix-turn-helix XRE-family like proteins K21498 - - 0.00000000000000000000000000000000000000000000000000004186 188.0
PJD1_k127_3727500_1 PFAM Plasmid maintenance system killer K07334 - - 0.0000000000000000000000000000000000000000000000001419 177.0
PJD1_k127_3727500_2 Domain of unknown function (DUF4431) - - - 0.00000000001283 68.0
PJD1_k127_3727500_3 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.00000001015 68.0
PJD1_k127_3742172_0 Tetratricopeptide repeat - - - 3.06e-208 673.0
PJD1_k127_3742172_1 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000009259 221.0
PJD1_k127_3742172_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000132 162.0
PJD1_k127_3795875_0 TIGRFAM drug resistance transporter, EmrB QacA subfamily K03446 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 556.0
PJD1_k127_3795875_1 PFAM secretion protein HlyD family protein K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 358.0
PJD1_k127_379641_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 408.0
PJD1_k127_379641_1 Biotin/lipoate A/B protein ligase family K03800 - 6.3.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008518 326.0
PJD1_k127_379641_2 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000001577 240.0
PJD1_k127_379641_3 ATPase, AAA superfamily K07133 - - 0.00000000000000000004505 91.0
PJD1_k127_379641_4 Resolvase, N terminal domain - - - 0.0002096 46.0
PJD1_k127_3811063_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 3.76e-245 762.0
PJD1_k127_3811063_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789,K18138 - - 1.794e-238 744.0
PJD1_k127_3811063_2 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00941,K14153,K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 402.0
PJD1_k127_3886667_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.472e-314 972.0
PJD1_k127_3886667_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 1.895e-249 774.0
PJD1_k127_3886667_10 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004802 318.0
PJD1_k127_3886667_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 291.0
PJD1_k127_3886667_12 Tfp pilus assembly protein FimV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002861 295.0
PJD1_k127_3886667_13 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001216 281.0
PJD1_k127_3886667_14 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002982 278.0
PJD1_k127_3886667_15 Nitrogen fixation transcript antitermination sensor histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003122 245.0
PJD1_k127_3886667_16 Nitrogen regulatory protein P-II K04751 - - 0.000000000000000000000000000000000000000000000000000000001541 201.0
PJD1_k127_3886667_17 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000002574 178.0
PJD1_k127_3886667_18 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000001289 170.0
PJD1_k127_3886667_19 COG2335, Secreted and surface protein containing fasciclin-like repeats - - - 0.000000000000000000000000000000000000001141 151.0
PJD1_k127_3886667_2 General secretory system II protein E domain protein - - - 2.747e-209 668.0
PJD1_k127_3886667_20 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000002054 156.0
PJD1_k127_3886667_21 YbbR-like protein - - - 0.0000000000000000000001999 102.0
PJD1_k127_3886667_3 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain K00261 - 1.4.1.3 1.494e-202 639.0
PJD1_k127_3886667_4 Protein of unknown function (DUF4080) K04034 - 1.21.98.3 4.557e-194 622.0
PJD1_k127_3886667_5 Ammonium Transporter Family K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 526.0
PJD1_k127_3886667_6 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008135 431.0
PJD1_k127_3886667_7 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 400.0
PJD1_k127_3886667_8 Inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 383.0
PJD1_k127_3886667_9 Pterin binding enzyme K00796,K13941 - 2.5.1.15,2.7.6.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006026 357.0
PJD1_k127_3900939_0 PFAM Cys Met metabolism K01740 - 2.5.1.49 6.83e-238 739.0
PJD1_k127_3900939_1 PFAM Ketose-bisphosphate aldolase, class-II K01624 - 4.1.2.13 5.532e-214 671.0
PJD1_k127_3900939_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 507.0
PJD1_k127_3900939_3 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.00000000000000007365 81.0
PJD1_k127_3928508_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.941e-277 863.0
PJD1_k127_3928508_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 6.543e-225 710.0
PJD1_k127_3928508_10 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 GO:0003674,GO:0003824,GO:0008110,GO:0008483,GO:0016740,GO:0016769 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003508 285.0
PJD1_k127_3928508_11 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000000000000000000001107 168.0
PJD1_k127_3928508_12 phosphoribosyl-ATP diphosphatase activity K01523 - 3.6.1.31 0.0000000000000000000000000000000000000001208 153.0
PJD1_k127_3928508_13 AmiS/UreI family transporter - - - 0.000000000000000000000000000000000000000151 156.0
PJD1_k127_3928508_14 PFAM Colicin V production protein K03558 - - 0.0000000000000000000000000000000000003081 146.0
PJD1_k127_3928508_15 structural constituent of ribosome K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000005507 109.0
PJD1_k127_3928508_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 4.996e-204 642.0
PJD1_k127_3928508_3 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005553 557.0
PJD1_k127_3928508_4 THUMP K07444,K12297 - 2.1.1.173,2.1.1.264 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004199 512.0
PJD1_k127_3928508_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004751 464.0
PJD1_k127_3928508_6 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007956 408.0
PJD1_k127_3928508_7 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006108 392.0
PJD1_k127_3928508_8 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 350.0
PJD1_k127_3928508_9 imidazoleglycerol-phosphate dehydratase activity K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 329.0
PJD1_k127_3989150_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 4.625e-304 937.0
PJD1_k127_3989150_1 PFAM DAHP synthetase I KDSA K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 461.0
PJD1_k127_3989150_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009469 404.0
PJD1_k127_3989150_3 Cytochrome P460 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002229 236.0
PJD1_k127_3989150_4 Domain of unknown function (DUF1287) K09974 - - 0.0000000000000000000000000000000000000000000000000000000000000001097 230.0
PJD1_k127_3989150_6 - - - - 0.00000000000000003471 91.0
PJD1_k127_4027514_0 carbohydrate transport K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 606.0
PJD1_k127_4027514_1 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000873 145.0
PJD1_k127_4030090_0 Alpha/beta hydrolase of unknown function (DUF1100) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004766 553.0
PJD1_k127_4030090_1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 477.0
PJD1_k127_4030090_2 SseB protein N-terminal domain - - - 0.000002436 52.0
PJD1_k127_4037025_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0 1029.0
PJD1_k127_4037025_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 3.743e-263 816.0
PJD1_k127_4037025_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 1e-257 799.0
PJD1_k127_4037025_3 Bacterial transcriptional repressor C-terminal K16137 - - 0.000000000000000000000000000000000000000000000000000000000000000001777 232.0
PJD1_k127_4037025_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000002185 154.0
PJD1_k127_4037025_5 - - - - 0.000000000000000000000000000000405 131.0
PJD1_k127_4037025_6 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0000000000000000000004465 97.0
PJD1_k127_4037025_7 Putative regulatory protein - - - 0.000000000001478 69.0
PJD1_k127_403845_0 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005133 284.0
PJD1_k127_403845_1 Transglycosylase SLT domain K03194 - - 0.000000000000000000000000000000000000000000000000000004231 198.0
PJD1_k127_403845_2 Transglycosylase K21464 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000001424 145.0
PJD1_k127_407781_0 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 1.452e-211 671.0
PJD1_k127_407781_1 PFAM Class II aldolase K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 516.0
PJD1_k127_407781_2 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000004281 277.0
PJD1_k127_407781_3 Maf-like protein K06287 GO:0003674,GO:0003824,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0047429 - 0.0000000000000000000000000000000000000000000000000000003534 200.0
PJD1_k127_407781_4 - - - - 0.0003341 44.0
PJD1_k127_4118569_0 D-alanine [D-alanyl carrier protein] ligase activity - - - 0.0000000000000000000000000000000001196 143.0
PJD1_k127_4118569_1 PFAM Forkhead-associated protein - - - 0.0000000000000006027 85.0
PJD1_k127_4122003_0 transcriptional regulator K14414 - - 1.159e-263 820.0
PJD1_k127_4122003_1 Belongs to the RtcB family K14415 - 6.5.1.3 1.32e-220 691.0
PJD1_k127_4122003_2 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006618 551.0
PJD1_k127_4122003_3 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008453 512.0
PJD1_k127_4122003_4 Pfam:DUF162 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 331.0
PJD1_k127_4122003_5 PFAM Phosphoribosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 309.0
PJD1_k127_4122003_6 VIT family - - - 0.00000000000000000000000000000001591 128.0
PJD1_k127_4122003_7 - - - - 0.000000000000000008516 89.0
PJD1_k127_4125101_0 hydrolase activity, hydrolyzing O-glycosyl compounds K05341,K05343 - 2.4.1.4,3.2.1.1,5.4.99.16 5.216e-209 660.0
PJD1_k127_4125101_1 Bacterial extracellular solute-binding protein K15770 - - 0.000000000000000000000000000000000000000000000000000000000001492 219.0
PJD1_k127_4151172_0 GTPase subunit of restriction endonuclease K07452 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003924,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015666,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0017111,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901361,GO:1901363,GO:1901575 - 0.000000000000000000000000000000000000000000000000002758 201.0
PJD1_k127_4213606_0 Methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009389 541.0
PJD1_k127_4213606_1 SMART Elongator protein 3 MiaB NifB K07139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005544 478.0
PJD1_k127_4213606_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006534 458.0
PJD1_k127_4213606_3 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 458.0
PJD1_k127_4213606_4 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001071 263.0
PJD1_k127_4213606_5 ThiS family K03154 - - 0.0000000000000000000537 93.0
PJD1_k127_4258499_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 2.195e-297 917.0
PJD1_k127_4258499_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.904e-263 817.0
PJD1_k127_4258499_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007588 607.0
PJD1_k127_4258499_3 peptidase M42 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009581 553.0
PJD1_k127_4258499_4 Dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004077 298.0
PJD1_k127_4258499_5 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004507 269.0
PJD1_k127_4258499_7 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000004455 144.0
PJD1_k127_4258499_8 - - - - 0.000000000000000003708 88.0
PJD1_k127_4317120_0 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 358.0
PJD1_k127_4317120_1 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001668 252.0
PJD1_k127_4317120_2 Transcriptional regulator - - - 0.00000000000000000000000006052 109.0
PJD1_k127_4328893_0 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005297 372.0
PJD1_k127_4330633_0 CoA-substrate-specific enzyme activase - - - 0.0 1350.0
PJD1_k127_4330633_1 Radical SAM domain protein K03424 - - 2.999e-235 734.0
PJD1_k127_4330633_2 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000006762 241.0
PJD1_k127_4345566_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.0 1140.0
PJD1_k127_4345566_1 Metallo-beta-lactamase superfamily K22405 - 1.6.3.4 6.295e-229 713.0
PJD1_k127_4345566_10 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000007686 159.0
PJD1_k127_4345566_11 - - - - 0.0000000000000005422 89.0
PJD1_k127_4345566_13 PFAM peptidase M3A and M3B, thimet oligopeptidase F K08602 - - 0.0000001632 53.0
PJD1_k127_4345566_15 - - - - 0.000008166 53.0
PJD1_k127_4345566_2 R3H domain - - - 5.498e-216 681.0
PJD1_k127_4345566_3 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031420,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 6.436e-208 655.0
PJD1_k127_4345566_4 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 422.0
PJD1_k127_4345566_5 H( )-stimulated, divalent metal cation uptake system K03322 - - 0.00000000000000000000000000000000000000000000000000000000000000001006 228.0
PJD1_k127_4345566_6 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000001862 217.0
PJD1_k127_4345566_7 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000001171 213.0
PJD1_k127_4345566_8 Ferric uptake regulator family K03711,K09825 - - 0.000000000000000000000000000000000000000000000000006021 184.0
PJD1_k127_4345566_9 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000006045 168.0
PJD1_k127_4380559_0 dienelactone hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006494 428.0
PJD1_k127_4380559_1 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 405.0
PJD1_k127_4380559_2 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000001881 104.0
PJD1_k127_4386251_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 4.564e-279 863.0
PJD1_k127_4386251_1 Belongs to the GARS family K01945 - 6.3.4.13 1.367e-228 713.0
PJD1_k127_4386251_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008078 601.0
PJD1_k127_4386251_3 Domain of unknown function (DUF4445) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 483.0
PJD1_k127_4386251_4 TIR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 316.0
PJD1_k127_4386251_5 Phage lysozyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 338.0
PJD1_k127_4386251_6 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000002089 249.0
PJD1_k127_4386251_7 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000006002 217.0
PJD1_k127_4386251_8 cellular component assembly - - - 0.00000003864 68.0
PJD1_k127_4455471_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 5.193e-294 912.0
PJD1_k127_4455471_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 6.81e-237 737.0
PJD1_k127_4455471_10 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 351.0
PJD1_k127_4455471_11 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 313.0
PJD1_k127_4455471_12 PFAM amino acid-binding ACT domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001233 242.0
PJD1_k127_4455471_13 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000001596 237.0
PJD1_k127_4455471_14 Belongs to the bacterial histone-like protein family K05788 - - 0.00000000000000000000000000000000000003505 144.0
PJD1_k127_4455471_2 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 588.0
PJD1_k127_4455471_3 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 586.0
PJD1_k127_4455471_4 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 556.0
PJD1_k127_4455471_5 Na+/Pi-cotransporter K03324 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007055 512.0
PJD1_k127_4455471_6 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 449.0
PJD1_k127_4455471_7 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 438.0
PJD1_k127_4455471_8 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 391.0
PJD1_k127_4455471_9 PFAM ABC transporter K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 370.0
PJD1_k127_4495893_0 Methyltransferase, chemotaxis proteins K00575,K13924 - 2.1.1.80,3.1.1.61 0.0 1322.0
PJD1_k127_4495893_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K00575 - 2.1.1.80 2.007e-247 775.0
PJD1_k127_4495893_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 586.0
PJD1_k127_4495893_3 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 546.0
PJD1_k127_4495893_4 Protein of unknown function (DUF1207) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002065 249.0
PJD1_k127_4495893_5 - - - - 0.00000000000000000000000000001067 119.0
PJD1_k127_4495893_7 LTXXQ motif family protein - - - 0.00000000000002835 79.0
PJD1_k127_4495893_8 - - - - 0.00003438 51.0
PJD1_k127_4544242_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 1.89e-229 716.0
PJD1_k127_4544242_1 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 609.0
PJD1_k127_4544242_10 Stage II sporulation protein M - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052 394.0
PJD1_k127_4544242_11 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 375.0
PJD1_k127_4544242_12 Domain of unknown function (DUF4129) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 366.0
PJD1_k127_4544242_13 RDD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002459 258.0
PJD1_k127_4544242_14 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008896 252.0
PJD1_k127_4544242_15 PFAM ABC transporter related K16786,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001029 248.0
PJD1_k127_4544242_16 transmembrane transporter activity K16783,K16785 - - 0.000000000000000000000000000000000000000000000000000000000000000000002279 244.0
PJD1_k127_4544242_17 PFAM ABC transporter related K16786,K16787 - - 0.00000000000000000000000000000000000000000000000000000000000000000004348 238.0
PJD1_k127_4544242_18 histone acetyltransferase binding - - - 0.00000000000000000000000000000000000000000000000000000000000008078 228.0
PJD1_k127_4544242_19 gag-polyprotein putative aspartyl protease - - - 0.000000000000000000000000000000000000000000000000000000000007524 213.0
PJD1_k127_4544242_2 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007602 582.0
PJD1_k127_4544242_20 RDD family - - - 0.0000000000000000000000000000000000000000000000005087 186.0
PJD1_k127_4544242_21 - - - - 0.000000000000000000000000000000000000000000195 165.0
PJD1_k127_4544242_22 - - - - 0.00000000000000000000000000308 116.0
PJD1_k127_4544242_23 - - - - 0.000000000000000000000000004887 113.0
PJD1_k127_4544242_24 - - - - 0.000000000000007514 82.0
PJD1_k127_4544242_3 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007523 581.0
PJD1_k127_4544242_4 Thiamine biosynthesis protein (ThiI) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 537.0
PJD1_k127_4544242_5 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008874 528.0
PJD1_k127_4544242_6 TIGRFAM cation diffusion facilitator family transporter K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 503.0
PJD1_k127_4544242_7 PFAM General secretory system II protein E domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 480.0
PJD1_k127_4544242_8 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009205 465.0
PJD1_k127_4544242_9 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005407 405.0
PJD1_k127_4552527_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.756e-283 882.0
PJD1_k127_4552527_1 CBS domain containing protein K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006462 605.0
PJD1_k127_4552527_2 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009401 471.0
PJD1_k127_4552527_3 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005711 369.0
PJD1_k127_4552527_4 Protein of unknown function (DUF559) K07316 - 2.1.1.72 0.00001681 48.0
PJD1_k127_4592733_0 phosphorelay sensor kinase activity K02660,K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000006447 253.0
PJD1_k127_4592733_1 TraB family K09973 - - 0.00000000000000000000000000000000000000000000000000001073 200.0
PJD1_k127_4592733_3 - - - - 0.000000000000000000000000000000000000004247 160.0
PJD1_k127_4592733_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K12257 - - 0.00000000000000000001482 102.0
PJD1_k127_4592733_5 Histidine kinase-, DNA gyrase B-, and HSP90-like K11527 - 2.7.13.3 0.000000000000000004335 89.0
PJD1_k127_4626828_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1215.0
PJD1_k127_4626828_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.822e-318 982.0
PJD1_k127_4626828_10 PFAM Cys Met metabolism K01740 - 2.5.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 497.0
PJD1_k127_4626828_11 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 488.0
PJD1_k127_4626828_12 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 483.0
PJD1_k127_4626828_13 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 475.0
PJD1_k127_4626828_14 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 396.0
PJD1_k127_4626828_15 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004029 351.0
PJD1_k127_4626828_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 327.0
PJD1_k127_4626828_17 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 304.0
PJD1_k127_4626828_18 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004581 314.0
PJD1_k127_4626828_19 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001067 258.0
PJD1_k127_4626828_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.418e-228 712.0
PJD1_k127_4626828_20 Right handed beta helix region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009688 263.0
PJD1_k127_4626828_21 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000000000000000006533 243.0
PJD1_k127_4626828_22 TIGRFAM sugar-phosphate isomerase, RpiB LacA LacB family K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000001199 225.0
PJD1_k127_4626828_23 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000000000000000000000000000000005468 194.0
PJD1_k127_4626828_24 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000002674 134.0
PJD1_k127_4626828_25 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000000000000003427 130.0
PJD1_k127_4626828_26 structural constituent of ribosome K02911 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000000000001917 114.0
PJD1_k127_4626828_27 Protein of unknown function (DUF1566) - - - 0.000000000000004234 92.0
PJD1_k127_4626828_28 - - - - 0.00000000002502 71.0
PJD1_k127_4626828_29 - - - - 0.00000001489 63.0
PJD1_k127_4626828_3 SMART Nucleotide binding protein, PINc K07175 - - 1.822e-225 704.0
PJD1_k127_4626828_30 PFAM Transposase K07491 - - 0.0000000265 61.0
PJD1_k127_4626828_31 - - - - 0.0000002535 56.0
PJD1_k127_4626828_32 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000006023 54.0
PJD1_k127_4626828_4 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 3.085e-224 700.0
PJD1_k127_4626828_5 AAA ATPase, central domain protein K07478 - - 4.114e-216 677.0
PJD1_k127_4626828_6 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 2.417e-212 669.0
PJD1_k127_4626828_7 PKD domain containing protein K01337,K20276,K21449 - 3.4.21.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 631.0
PJD1_k127_4626828_8 Galactose oxidase, central domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 627.0
PJD1_k127_4626828_9 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 526.0
PJD1_k127_4636209_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 2.865e-225 716.0
PJD1_k127_4636209_1 PFAM ATPase associated with various cellular activities, AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 490.0
PJD1_k127_4636209_10 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004736 262.0
PJD1_k127_4636209_11 Bis-adenosyl-polyphosphate hydrolase, FHIT domain-containing K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000000000000000000000000003104 230.0
PJD1_k127_4636209_12 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000000000000000000000002726 216.0
PJD1_k127_4636209_13 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000004265 172.0
PJD1_k127_4636209_14 - - - - 0.00000000000000000000000000000000004233 136.0
PJD1_k127_4636209_15 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 0.0000000000000004776 77.0
PJD1_k127_4636209_2 Amidohydrolase family K20810 - 3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 488.0
PJD1_k127_4636209_3 Domain of unknown function (DUF3488) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 462.0
PJD1_k127_4636209_4 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 414.0
PJD1_k127_4636209_5 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 370.0
PJD1_k127_4636209_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 385.0
PJD1_k127_4636209_7 HipA-like C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 340.0
PJD1_k127_4636209_8 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 330.0
PJD1_k127_4636209_9 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001894 283.0
PJD1_k127_4659949_0 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 411.0
PJD1_k127_4659949_1 Capsule synthesis protein K07282 - - 0.000000000000000000000000000000000000000000000000000000000205 222.0
PJD1_k127_4680691_0 gluconate transmembrane transporter activity - - - 1.54e-208 656.0
PJD1_k127_4680691_1 TIGRFAM sulfate adenylyltransferase, small subunit K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 500.0
PJD1_k127_4680691_10 PFAM transposase, IS4 family protein - - - 0.000000000000000000000004702 102.0
PJD1_k127_4680691_11 TM2 domain - - - 0.0000000000000000000764 93.0
PJD1_k127_4680691_14 PFAM transposase, IS4 family protein - - - 0.0004335 47.0
PJD1_k127_4680691_2 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009393 491.0
PJD1_k127_4680691_3 Nitrite and sulphite reductase 4Fe-4S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009522 472.0
PJD1_k127_4680691_4 PFAM UBA THIF-type NAD FAD binding protein K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 432.0
PJD1_k127_4680691_5 PFAM transposase, IS4 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 432.0
PJD1_k127_4680691_6 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 376.0
PJD1_k127_4680691_7 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 328.0
PJD1_k127_4680691_8 SMART Mov34 MPN PAD-1 family protein K21140 - 3.13.1.6 0.00000000000000000000000000000000003626 138.0
PJD1_k127_4680691_9 Belongs to the sulfur carrier protein TusA family - - - 0.00000000000000000000000000485 111.0
PJD1_k127_4771070_0 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 4.145e-229 722.0
PJD1_k127_4771070_1 Tim44 K02117,K08678,K11646,K15539,K17835,K21636 - 1.1.98.6,1.4.1.24,3.6.3.14,3.6.3.15,4.1.1.35,4.1.99.20 1.992e-228 735.0
PJD1_k127_4771070_2 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 434.0
PJD1_k127_4771070_3 regulatory protein LysR K02019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005373 296.0
PJD1_k127_4771070_4 Cupin superfamily (DUF985) K09705 - - 0.0000000000000000000000000000000000000000000000000000000000000009965 222.0
PJD1_k127_4771070_5 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000001273 215.0
PJD1_k127_4771070_8 PFAM type II secretion system protein G K02456 - - 0.0004367 49.0
PJD1_k127_4814941_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 566.0
PJD1_k127_4814941_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 419.0
PJD1_k127_4814941_10 Universal bacterial protein YeaZ K14742 - - 0.0000000000000004256 80.0
PJD1_k127_4814941_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 407.0
PJD1_k127_4814941_3 Predicted permease YjgP/YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 412.0
PJD1_k127_4814941_4 PDZ DHR GLGF domain protein K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 391.0
PJD1_k127_4814941_5 PFAM permease YjgP YjgQ family protein K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 389.0
PJD1_k127_4814941_6 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008404 363.0
PJD1_k127_4814941_7 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 356.0
PJD1_k127_4814941_8 PFAM phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 287.0
PJD1_k127_4814941_9 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004623 273.0
PJD1_k127_4823827_0 Type VI secretion system, TssF K11896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003799 550.0
PJD1_k127_4823827_1 Phage late control gene D protein (GPD) K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 547.0
PJD1_k127_4823827_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003656 295.0
PJD1_k127_4823827_3 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000000003063 177.0
PJD1_k127_4823827_4 RHS Repeat - - - 0.00000000000006973 72.0
PJD1_k127_4823827_5 PFAM WD domain, G-beta repeat - - - 0.00000000006126 74.0
PJD1_k127_4836657_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 1.263e-235 737.0
PJD1_k127_4836657_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 471.0
PJD1_k127_4836657_2 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007128 392.0
PJD1_k127_4836657_3 PFAM Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 336.0
PJD1_k127_4836657_4 - - - - 0.00003493 50.0
PJD1_k127_4839333_0 DHHA2 K15986 - 3.6.1.1 5.657e-252 786.0
PJD1_k127_4839333_1 Domain of unknown function (DUF4143) K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 402.0
PJD1_k127_4839333_2 alpha beta K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 316.0
PJD1_k127_4839333_3 choline dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000002924 187.0
PJD1_k127_4839333_4 Universal stress protein family - - - 0.000000000000000000000000000000000008466 142.0
PJD1_k127_4839333_5 PFAM Cache, type 2 domain protein K02480 - 2.7.13.3 0.00000000000000000000000000000004779 131.0
PJD1_k127_4860673_0 Protein of unknown function, DUF255 K06888 - - 3.256e-233 742.0
PJD1_k127_4860673_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004752 520.0
PJD1_k127_4860673_2 Catalyzes the conversion of dihydroorotate to orotate with NAD( ) as electron acceptor K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004905 509.0
PJD1_k127_4860673_3 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 400.0
PJD1_k127_4860673_4 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 391.0
PJD1_k127_4860673_5 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000001425 117.0
PJD1_k127_4863210_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 504.0
PJD1_k127_4863210_1 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000004314 175.0
PJD1_k127_4863210_2 Cytochrome c K08906,K12263 - - 0.000000000000000000000000002753 117.0
PJD1_k127_4863210_3 Transposase IS200 like - - - 0.00000000000000000002298 94.0
PJD1_k127_4863210_4 - - - - 0.0000000000000003155 85.0
PJD1_k127_4863210_5 Transposase IS200 like - - - 0.0003338 46.0
PJD1_k127_4863210_6 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0006693 43.0
PJD1_k127_48681_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1612.0
PJD1_k127_48681_1 PFAM phosphate transporter K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 505.0
PJD1_k127_48681_10 EamA-like transporter family - - - 0.0000000000000000000000000000007519 134.0
PJD1_k127_48681_12 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000543 48.0
PJD1_k127_48681_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 462.0
PJD1_k127_48681_3 PFAM ThiJ PfpI domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005774 351.0
PJD1_k127_48681_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005898 360.0
PJD1_k127_48681_5 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000000000000000000000000000000000000000000000113 216.0
PJD1_k127_48681_6 Membrane transport protein K07088 - - 0.000000000000000000000000000000000000000000001492 177.0
PJD1_k127_48681_7 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.00000000000000000000000000000000000001846 148.0
PJD1_k127_48681_8 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000003479 156.0
PJD1_k127_48681_9 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000003203 146.0
PJD1_k127_4910495_0 ThiF family K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000222 282.0
PJD1_k127_4910495_1 Protein of unknown function (DUF1810) - - - 0.00000000000000000000000000000000000000000000000000002948 191.0
PJD1_k127_4910495_2 Glutaredoxin - - - 0.0000000000000000000000000000000000000000000000006947 186.0
PJD1_k127_4910495_3 CBS domain K04767 - - 0.0000000000000000000000000000000000000000000003777 169.0
PJD1_k127_4910495_4 Transposase DDE domain - - - 0.0000001525 54.0
PJD1_k127_4910495_5 galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.0003127 52.0
PJD1_k127_4911681_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000001044 225.0
PJD1_k127_4911681_1 GAF domain - - - 0.00000000000000000000000000000000000000000002063 182.0
PJD1_k127_4923872_0 Response receiver scaffold protein CheV K03415 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 439.0
PJD1_k127_4923872_2 Diacylglycerol kinase K19302 - 3.6.1.27 0.000000003084 68.0
PJD1_k127_4953838_0 PFAM peptidase M48 Ste24p - - - 8.987e-247 777.0
PJD1_k127_4953838_1 PFAM LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009122 253.0
PJD1_k127_4953838_2 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009869 243.0
PJD1_k127_4953838_3 Domain of unknown function (DUF1287) - - - 0.0000000000000000000000000003986 123.0
PJD1_k127_4953838_4 Putative prokaryotic signal transducing protein - - - 0.0000000000000000000000001402 110.0
PJD1_k127_4953838_5 beta-lactamase activity K07126 - - 0.000000000000000000000001992 109.0
PJD1_k127_4958471_0 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009244 465.0
PJD1_k127_4958471_1 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02032,K10823,K12372 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 432.0
PJD1_k127_4958471_2 PFAM Stage II sporulation K06381 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 432.0
PJD1_k127_4958471_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 333.0
PJD1_k127_4958471_4 PFAM regulatory protein, ArsR - - - 0.0000000000000000000000000000000000000000003689 160.0
PJD1_k127_4958471_5 nuclear chromosome segregation - - - 0.000000000000000000000000000004474 136.0
PJD1_k127_4961226_0 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 534.0
PJD1_k127_4961226_1 Pfam Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 351.0
PJD1_k127_4961226_2 TIGRFAM Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 352.0
PJD1_k127_4961226_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002397 284.0
PJD1_k127_4961226_4 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000000000000004119 146.0
PJD1_k127_4961226_5 Histidine kinase - - - 0.0000000000000000000000000006606 132.0
PJD1_k127_4965623_0 PFAM SNF2-related protein - - - 0.0 1052.0
PJD1_k127_4965623_1 - - - - 0.0 1020.0
PJD1_k127_4965623_10 Protein of unknown function (DUF559) - - - 0.00000000000000000000000000000000000000000000000000000000000005382 218.0
PJD1_k127_4965623_11 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.00000000000000000000000000000000003231 137.0
PJD1_k127_4965623_13 Protein of unknown function (DUF559) K07316 - 2.1.1.72 0.00000000194 61.0
PJD1_k127_4965623_14 COG1002 Type II restriction enzyme methylase subunits - - - 0.000002231 52.0
PJD1_k127_4965623_2 ABC transporter transmembrane region K06147,K18890 - - 6.009e-272 851.0
PJD1_k127_4965623_3 ABC transporter transmembrane region K06147,K18889 - - 1.048e-246 776.0
PJD1_k127_4965623_4 Phosphoglucomutase/phosphomannomutase, C-terminal domain - - - 4.206e-230 721.0
PJD1_k127_4965623_5 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006201 559.0
PJD1_k127_4965623_6 associated with various cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 469.0
PJD1_k127_4965623_7 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 446.0
PJD1_k127_4965623_8 Protoglobin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 414.0
PJD1_k127_4965623_9 Belongs to the UPF0149 family K07039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001693 276.0
PJD1_k127_49990_0 Belongs to the NifD NifK NifE NifN family K02587 - - 0.0 1561.0
PJD1_k127_49990_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 4.194e-316 985.0
PJD1_k127_49990_10 two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 533.0
PJD1_k127_49990_11 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 489.0
PJD1_k127_49990_12 PFAM beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 474.0
PJD1_k127_49990_13 Elongator protein 3, MiaB family, Radical SAM K02585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000947 454.0
PJD1_k127_49990_14 PFAM Dinitrogenase reductase ADP-ribosyltransferase K05951 - 2.4.2.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 446.0
PJD1_k127_49990_15 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 444.0
PJD1_k127_49990_16 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 435.0
PJD1_k127_49990_17 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 411.0
PJD1_k127_49990_18 Ferritin Dps family protein K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 304.0
PJD1_k127_49990_19 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003987 287.0
PJD1_k127_49990_2 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 7.34e-289 890.0
PJD1_k127_49990_20 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007259 278.0
PJD1_k127_49990_21 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001047 260.0
PJD1_k127_49990_22 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002725 250.0
PJD1_k127_49990_23 - - - - 0.000000000000000000000000000000000000000000000000000000001391 218.0
PJD1_k127_49990_24 Dinitrogenase iron-molybdenum cofactor biosynthesis protein K02596 - - 0.0000000000000000000000000000000000000000000000000000004007 195.0
PJD1_k127_49990_25 response regulator - - - 0.000000000000000000000000000000000000000000000000001932 190.0
PJD1_k127_49990_26 helix_turn_helix, Lux Regulon K02282,K07689 - - 0.0000000000000000000000000000000000000000000000002924 184.0
PJD1_k127_49990_27 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000003299 170.0
PJD1_k127_49990_28 Outer membrane lipoprotein Slp family K07285 - - 0.0000000000000000000000000000000000000000000001317 175.0
PJD1_k127_49990_29 PFAM Plasmid stabilisation system K06218 - - 0.0000000000000000000000000000000000000000000009531 167.0
PJD1_k127_49990_3 Nitrogenase component 1 type Oxidoreductase K02586 - 1.18.6.1 1.571e-288 889.0
PJD1_k127_49990_30 Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000000000000000000000000004188 165.0
PJD1_k127_49990_31 Histidine kinase - - - 0.000000000000000000000000000000000000000002948 175.0
PJD1_k127_49990_32 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000002465 161.0
PJD1_k127_49990_33 Ankyrin repeat - - - 0.000000000000000000000000000000000000001233 154.0
PJD1_k127_49990_34 Glutaredoxin - - - 0.00000000000000000000000000000000000009268 148.0
PJD1_k127_49990_35 - - - - 0.0000000000000000000000000000000000002045 145.0
PJD1_k127_49990_36 - - - - 0.00000000000000000000000000000005751 142.0
PJD1_k127_49990_37 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000002511 135.0
PJD1_k127_49990_38 Histidine kinase K20972,K20973 - 2.7.13.3 0.000000000000000000000000000002417 125.0
PJD1_k127_49990_39 Protein of unknown function (DUF3732) - - - 0.0000000000000000000000000000461 117.0
PJD1_k127_49990_4 PFAM aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 3.938e-288 894.0
PJD1_k127_49990_41 PFAM Bacterial SH3 domain - - - 0.00000000000000000000000000776 116.0
PJD1_k127_49990_42 Diguanylate cyclase - - - 0.00000000000000000000000009084 123.0
PJD1_k127_49990_43 - - - - 0.000000000000000000000001627 109.0
PJD1_k127_49990_44 DNA integration - - - 0.000000000000000000001248 102.0
PJD1_k127_49990_45 - - - - 0.000000000000000000001828 100.0
PJD1_k127_49990_46 Domain of unknown function (DUF4272) - - - 0.0000000000000000003635 101.0
PJD1_k127_49990_47 - - - - 0.0000000000000001725 86.0
PJD1_k127_49990_48 Histidine kinase K14978 - - 0.000000000000000273 85.0
PJD1_k127_49990_49 Antitoxin Phd_YefM, type II toxin-antitoxin system K18923 - - 0.00000000000002765 75.0
PJD1_k127_49990_5 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 2.151e-240 752.0
PJD1_k127_49990_50 LysM domain - - - 0.00000000001041 71.0
PJD1_k127_49990_51 Histidine kinase - - - 0.00000000001717 67.0
PJD1_k127_49990_54 Lysin motif - - - 0.000000000807 66.0
PJD1_k127_49990_56 integral membrane protein - - - 0.0000002502 61.0
PJD1_k127_49990_57 ATP-binding region, ATPase domain protein domain protein K00384,K01338,K11527 - 1.8.1.9,2.7.13.3,3.4.21.53 0.000003363 50.0
PJD1_k127_49990_58 - - - - 0.0001385 46.0
PJD1_k127_49990_6 Outer membrane efflux protein - - - 9.913e-203 644.0
PJD1_k127_49990_7 HMGL-like K02594 - 2.3.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 589.0
PJD1_k127_49990_8 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 561.0
PJD1_k127_49990_9 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 526.0
PJD1_k127_5015666_0 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 1.695e-249 773.0
PJD1_k127_5015666_1 Elongation factor Tu GTP binding domain K00956 - 2.7.7.4 3.345e-206 650.0
PJD1_k127_5015666_2 OmpW family K07275 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001067 265.0
PJD1_k127_5033960_0 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 592.0
PJD1_k127_5033960_1 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 400.0
PJD1_k127_5033960_2 PFAM VacJ family lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004017 281.0
PJD1_k127_5033960_3 PFAM toluene tolerance K07323 - - 0.000000000000000000000000000000000000000005941 162.0
PJD1_k127_5033960_4 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.000000000000003698 77.0
PJD1_k127_5054899_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 0.0 1247.0
PJD1_k127_5054899_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005643 465.0
PJD1_k127_5054899_10 SlyX K03745 - - 0.00000000001731 67.0
PJD1_k127_5054899_2 Probable molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 340.0
PJD1_k127_5054899_3 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005436 267.0
PJD1_k127_5054899_4 light absorption K06893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001058 255.0
PJD1_k127_5054899_5 pfam nlp p60 K13694,K13695 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000000002335 227.0
PJD1_k127_5054899_6 Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000000000000000000000000000000000000000004645 218.0
PJD1_k127_5054899_7 Protein of unknown function (DUF456) K09793 - - 0.00000000000000000000000000000000000000000000000000000004204 201.0
PJD1_k127_5054899_8 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000002656 179.0
PJD1_k127_5054899_9 N-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.00000000000000000000000000000000000000006388 160.0
PJD1_k127_5061703_0 PFAM glycine cleavage system P-protein K00281,K00283 - 1.4.4.2 1.858e-234 741.0
PJD1_k127_5061703_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006799 305.0
PJD1_k127_5079371_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 601.0
PJD1_k127_5079752_0 CoA-substrate-specific enzyme activase - - - 0.0 1346.0
PJD1_k127_5079752_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006,K01007 - 2.7.9.1,2.7.9.2 0.0 1273.0
PJD1_k127_5079752_10 Omptin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 410.0
PJD1_k127_5079752_11 Cellulose biosynthesis protein BcsQ K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 388.0
PJD1_k127_5079752_12 PFAM Acetoacetate decarboxylase (ADC) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 338.0
PJD1_k127_5079752_13 Roadblock/LC7 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007609 332.0
PJD1_k127_5079752_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 312.0
PJD1_k127_5079752_15 beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 312.0
PJD1_k127_5079752_16 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004598 287.0
PJD1_k127_5079752_18 Staphylococcal nuclease homologue - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006887 252.0
PJD1_k127_5079752_2 radical SAM domain protein - - - 2.291e-219 698.0
PJD1_k127_5079752_20 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000000000000000000003839 235.0
PJD1_k127_5079752_21 Belongs to the small heat shock protein (HSP20) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000454 227.0
PJD1_k127_5079752_22 BrnA antitoxin of type II toxin-antitoxin system - - - 0.000000000000000000000000000000000000000000000000000001592 193.0
PJD1_k127_5079752_23 PFAM flavin reductase domain protein, FMN-binding - - - 0.0000000000000000000000000000000000000000000000001137 183.0
PJD1_k127_5079752_24 membrane - - - 0.000000000000000000000000000000000000000000001227 173.0
PJD1_k127_5079752_25 Protein of unknown function (DUF4241) - - - 0.0000000000000000000000000000000000008345 149.0
PJD1_k127_5079752_26 - - - - 0.000000000000000000000000000002296 128.0
PJD1_k127_5079752_27 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000000000000000009277 122.0
PJD1_k127_5079752_28 FIST N domain - - - 0.00000000000000000005375 90.0
PJD1_k127_5079752_29 Belongs to the UPF0354 family - - - 0.000000000003381 73.0
PJD1_k127_5079752_3 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004611 599.0
PJD1_k127_5079752_30 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000004445 66.0
PJD1_k127_5079752_32 Elongation factor Tu GTP binding domain - - - 0.00000000007613 73.0
PJD1_k127_5079752_33 - - - - 0.0000000001331 68.0
PJD1_k127_5079752_34 Glutamate synthase central domain K00265 - 1.4.1.13,1.4.1.14 0.0000001715 53.0
PJD1_k127_5079752_35 - - - - 0.000004447 55.0
PJD1_k127_5079752_36 - - - - 0.00000606 50.0
PJD1_k127_5079752_37 Tetratricopeptide repeat - - - 0.00001261 54.0
PJD1_k127_5079752_4 AAA domain K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 581.0
PJD1_k127_5079752_5 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134,K00150,K03340 - 1.2.1.12,1.2.1.59,1.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 539.0
PJD1_k127_5079752_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 518.0
PJD1_k127_5079752_7 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000946 488.0
PJD1_k127_5079752_8 Ion transport 2 domain protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007559 475.0
PJD1_k127_5079752_9 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 424.0
PJD1_k127_5107625_0 ABC transporter K06020 - 3.6.3.25 8.313e-313 963.0
PJD1_k127_5107625_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 9.956e-250 774.0
PJD1_k127_5107625_10 Metal-dependent phosphohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004294 283.0
PJD1_k127_5107625_11 Belongs to the MtfA family K09933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002456 271.0
PJD1_k127_5107625_12 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000002892 239.0
PJD1_k127_5107625_13 PFAM ATP-binding region, ATPase domain protein K04757 - 2.7.11.1 0.0000000000000000000000000000000000000000000003654 171.0
PJD1_k127_5107625_14 phosphohistidine phosphatase, SixA K08296 - - 0.000000000000000000000000000000000000000000006113 168.0
PJD1_k127_5107625_15 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000000000001151 136.0
PJD1_k127_5107625_16 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749 - - 0.00000000000000000000000000000001957 130.0
PJD1_k127_5107625_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 585.0
PJD1_k127_5107625_3 Protein of unknown function (DUF1385) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 474.0
PJD1_k127_5107625_4 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004426 456.0
PJD1_k127_5107625_5 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 391.0
PJD1_k127_5107625_6 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 376.0
PJD1_k127_5107625_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004792 366.0
PJD1_k127_5107625_8 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 348.0
PJD1_k127_5107625_9 Phosphorylase superfamily K00757 - 2.4.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 337.0
PJD1_k127_5129200_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 368.0
PJD1_k127_5129200_1 histidine kinase, HAMP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 380.0
PJD1_k127_5129200_2 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 283.0
PJD1_k127_5129723_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1530.0
PJD1_k127_5129723_1 Protein of unknown function (DUF3417) K00688 - 2.4.1.1 0.0 1275.0
PJD1_k127_5129723_10 Ion transport 2 domain protein K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008833 556.0
PJD1_k127_5129723_11 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 541.0
PJD1_k127_5129723_12 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 493.0
PJD1_k127_5129723_13 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 470.0
PJD1_k127_5129723_14 Adenosine/AMP deaminase K01488,K21053 - 3.5.4.2,3.5.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 457.0
PJD1_k127_5129723_15 PFAM Peptidase M20 K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 409.0
PJD1_k127_5129723_16 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004625 394.0
PJD1_k127_5129723_17 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 360.0
PJD1_k127_5129723_18 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251 363.0
PJD1_k127_5129723_19 Rhomboid family K07059 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 332.0
PJD1_k127_5129723_2 PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic K01886 - 6.1.1.18 1.347e-292 905.0
PJD1_k127_5129723_20 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 331.0
PJD1_k127_5129723_21 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 323.0
PJD1_k127_5129723_22 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006999 304.0
PJD1_k127_5129723_23 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 289.0
PJD1_k127_5129723_24 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001205 267.0
PJD1_k127_5129723_25 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001539 263.0
PJD1_k127_5129723_26 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001168 261.0
PJD1_k127_5129723_27 Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000001825 264.0
PJD1_k127_5129723_28 lysozyme activity K07273 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000893 250.0
PJD1_k127_5129723_29 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000009125 229.0
PJD1_k127_5129723_3 response regulator - - - 1.04e-229 719.0
PJD1_k127_5129723_30 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000003226 224.0
PJD1_k127_5129723_31 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000000001108 229.0
PJD1_k127_5129723_32 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.000000000000000000000000000000000000000000000000000000000000002083 224.0
PJD1_k127_5129723_33 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000006327 190.0
PJD1_k127_5129723_34 Thioesterase superfamily K19222 - 3.1.2.28 0.00000000000000000000000000000000000000000000000004791 181.0
PJD1_k127_5129723_35 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000003389 159.0
PJD1_k127_5129723_36 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00330 - 1.6.5.3 0.00000000000000000000000000000000000001788 148.0
PJD1_k127_5129723_37 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000003149 143.0
PJD1_k127_5129723_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 5.407e-227 713.0
PJD1_k127_5129723_5 PFAM Xanthine uracil vitamin C permease K06901 - - 2.278e-197 623.0
PJD1_k127_5129723_6 histidine kinase, HAMP - - - 2.887e-195 619.0
PJD1_k127_5129723_7 Surface antigen - - - 3.387e-195 615.0
PJD1_k127_5129723_8 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 618.0
PJD1_k127_5129723_9 PFAM DAHP synthetase I KDSA K03856,K04516 - 2.5.1.54,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 581.0
PJD1_k127_5135609_0 AsmA-like C-terminal region - - - 2.233e-300 957.0
PJD1_k127_5135609_1 RNA pseudouridylate synthase K06179 - 5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001302 275.0
PJD1_k127_5135609_2 ADP-ribosylglycohydrolase - - - 0.000000000000000000000000000000000000000000000000003469 184.0
PJD1_k127_5135609_3 Protein of unknown function (DUF559) K07316 - 2.1.1.72 0.0000000000000000000000000000000003848 135.0
PJD1_k127_5167309_0 PFAM type II secretion system protein E K02283,K03609 - - 5.271e-233 726.0
PJD1_k127_5167309_1 IMG reference gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004941 557.0
PJD1_k127_5167309_10 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001523 236.0
PJD1_k127_5167309_12 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000005385 120.0
PJD1_k127_5167309_13 PFAM TadE family protein - - - 0.00000000000000000000000000007125 121.0
PJD1_k127_5167309_14 PFAM TadE family protein - - - 0.000000000000000000108 94.0
PJD1_k127_5167309_15 TadE-like protein - - - 0.000000000000000001638 92.0
PJD1_k127_5167309_16 polysaccharide biosynthetic process K00655,K00721 - 2.3.1.51,2.4.1.83 0.000000000000000005154 92.0
PJD1_k127_5167309_2 Flp pilus polar localization response receiver ATPase TadZ, FlhG domain-containing K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 512.0
PJD1_k127_5167309_3 Pilus formation protein N terminal region K02280 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 498.0
PJD1_k127_5167309_4 Glycosyltransferase like family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005373 420.0
PJD1_k127_5167309_5 Type II secretion system (T2SS), protein F K12510 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 340.0
PJD1_k127_5167309_6 PFAM TadE family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 337.0
PJD1_k127_5167309_7 Type II secretion system (T2SS), protein F K12511 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 314.0
PJD1_k127_5167309_8 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 300.0
PJD1_k127_5167309_9 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 297.0
PJD1_k127_5182484_0 Phage late control gene D protein (GPD) K11904 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 562.0
PJD1_k127_5182484_1 PFAM Integrase catalytic region K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003169 450.0
PJD1_k127_5182484_2 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 339.0
PJD1_k127_5182484_3 GAD-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001933 244.0
PJD1_k127_5182484_4 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000009336 214.0
PJD1_k127_5182484_5 Type VI secretion system effector, Hcp K11903 - - 0.000000000000000000000000000000000000000000111 162.0
PJD1_k127_5182484_6 COG3209 Rhs family protein - - - 0.0000000000000000000000000005436 130.0
PJD1_k127_5182484_7 Domain of unknown function (DUF4150) - - - 0.0000000000000000000001185 113.0
PJD1_k127_5182484_8 transposase activity K07483,K07497 - - 0.00000000000000006911 84.0
PJD1_k127_5190208_0 Bacterial transcriptional activator domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 642.0
PJD1_k127_5190208_1 Dihydroorotate dehydrogenase K17723 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0048037,GO:0051536,GO:0051540,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008062 396.0
PJD1_k127_5190208_2 Cache domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001767 268.0
PJD1_k127_5190208_3 Dihydroorotate dehydrogenase K17723 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0048037,GO:0051536,GO:0051540,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 0.0000000000000000000000000000000000001097 144.0
PJD1_k127_5190208_4 PFAM Iron-containing alcohol dehydrogenase K00005 - 1.1.1.6 0.00001483 47.0
PJD1_k127_520315_0 glycosyl transferase family 2 K21349 - 2.4.1.268 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 594.0
PJD1_k127_520315_1 COG0463 Glycosyltransferases involved in cell wall biogenesis K13693 - 2.4.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 590.0
PJD1_k127_520315_2 transmembrane transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000009187 238.0
PJD1_k127_520315_3 haloacid dehalogenase-like hydrolase K07026 - 3.1.3.70 0.0000000000000000000000000000000000000000000000000000001225 201.0
PJD1_k127_520315_4 peptidyl-tyrosine sulfation - - - 0.0000000000000000000003605 98.0
PJD1_k127_5225537_0 PFAM Glycosyl transferase family 2 - - - 0.0 1084.0
PJD1_k127_5225537_1 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1071.0
PJD1_k127_5225537_10 PFAM flagellin domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 355.0
PJD1_k127_5225537_11 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009405 351.0
PJD1_k127_5225537_12 TIGRFAM RNA polymerase sigma factor, FliA WhiG family K02405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008439 342.0
PJD1_k127_5225537_13 PFAM GTP-binding signal recognition particle SRP54 G- domain K02404 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009793 332.0
PJD1_k127_5225537_14 Bacterial flagellin N-terminal helical region K02397 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 314.0
PJD1_k127_5225537_15 Flagellar basal body rod FlgEFG protein C-terminal K02391,K02392 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 297.0
PJD1_k127_5225537_16 Role in flagellar biosynthesis K02421 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006963 297.0
PJD1_k127_5225537_17 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003873 247.0
PJD1_k127_5225537_18 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008801 244.0
PJD1_k127_5225537_19 PilZ domain - - - 0.0000000000000000000000000000000000000000000000001918 188.0
PJD1_k127_5225537_2 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008642 537.0
PJD1_k127_5225537_20 Flagellar protein FlaF K06602 - - 0.000000000000000000000000000000000000000000000001172 177.0
PJD1_k127_5225537_21 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000007075 156.0
PJD1_k127_5225537_22 Type III flagellar switch regulator (C-ring) FliN C-term K02417 - - 0.00000000000000000000000000000000000000188 151.0
PJD1_k127_5225537_23 PFAM flagellar FlbT family protein K06601 - - 0.000000000000000000000000000000000000002267 150.0
PJD1_k127_5225537_24 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000006493 151.0
PJD1_k127_5225537_25 Flagellar biosynthetic protein FliQ K02420,K03227 - - 0.000000000000000000000000000000000012 139.0
PJD1_k127_5225537_26 Flagellar biosynthesis protein, FliO K02418 - - 0.0000000000000000000000000006644 119.0
PJD1_k127_5225537_27 PFAM Flagellar protein K02395 - - 0.000000000000000000000000004863 113.0
PJD1_k127_5225537_28 PFAM flagellar FlbD family protein K02385 - - 0.00000000000000000000000004253 109.0
PJD1_k127_5225537_3 Flagellar basal body rod protein K02396 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 492.0
PJD1_k127_5225537_31 bacterial-type flagellum organization K02398 - - 0.000001224 55.0
PJD1_k127_5225537_4 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 432.0
PJD1_k127_5225537_5 Flagellar motor switch protein FliM K02416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 422.0
PJD1_k127_5225537_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 427.0
PJD1_k127_5225537_7 Flagellar basal body rod FlgEFG protein C-terminal K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009347 416.0
PJD1_k127_5225537_8 PFAM MotA TolQ ExbB proton channel K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 393.0
PJD1_k127_5225537_9 Plays a role in the flagellum-specific transport system K02419 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 374.0
PJD1_k127_5238598_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 462.0
PJD1_k127_5238598_1 Penicillin-insensitive murein endopeptidase K07261 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001148 267.0
PJD1_k127_5238598_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004536 265.0
PJD1_k127_5246784_0 Belongs to the GPI family K01810 - 5.3.1.9 1.309e-241 756.0
PJD1_k127_5246784_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 325.0
PJD1_k127_5246784_2 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000004492 261.0
PJD1_k127_5246784_3 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003384 250.0
PJD1_k127_5246784_4 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000001861 212.0
PJD1_k127_5246784_5 CoA binding domain - - - 0.00000000000000000000000000000000000000000000000000001716 192.0
PJD1_k127_5246784_6 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000007303 149.0
PJD1_k127_5246784_7 response regulator receiver K07814 - - 0.0000000000000000000000000000000009545 147.0
PJD1_k127_5246784_8 Dodecin K09165 - - 0.0000000000000000000000000001055 116.0
PJD1_k127_5270043_0 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 9.707e-227 706.0
PJD1_k127_5270043_1 PFAM phosphate acetyl butaryl transferase K00625,K13788 - 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005696 529.0
PJD1_k127_5305109_0 Type VI secretion system, TssF K11896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003077 538.0
PJD1_k127_5346977_0 TIGRFAM drug resistance transporter, EmrB QacA subfamily K03446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 425.0
PJD1_k127_5346977_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000008099 224.0
PJD1_k127_5346977_2 Putative exonuclease, RdgC K03554 - - 0.000000000000000000000000005599 113.0
PJD1_k127_5355628_0 AcrB/AcrD/AcrF family K03296,K18138 - - 0.0 1645.0
PJD1_k127_5355628_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 3.466e-297 917.0
PJD1_k127_5355628_10 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 397.0
PJD1_k127_5355628_11 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 371.0
PJD1_k127_5355628_12 Conserved protein K01163 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 352.0
PJD1_k127_5355628_13 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009015 330.0
PJD1_k127_5355628_14 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006184 307.0
PJD1_k127_5355628_15 Elongator protein 3, MiaB family, Radical SAM K06937 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 308.0
PJD1_k127_5355628_16 Elongator protein 3, MiaB family, Radical SAM K06937 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006831 289.0
PJD1_k127_5355628_17 phosphoprotein phosphatase activity K07313 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000001532 251.0
PJD1_k127_5355628_18 PFAM alpha beta hydrolase fold K02170 - 3.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000001739 253.0
PJD1_k127_5355628_19 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001165 244.0
PJD1_k127_5355628_2 PFAM aspartate glutamate uridylate kinase K00928 - 2.7.2.4 5.637e-216 676.0
PJD1_k127_5355628_20 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0017144,GO:0018130,GO:0019752,GO:0032259,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000007785 240.0
PJD1_k127_5355628_21 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001283 243.0
PJD1_k127_5355628_22 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000009114 219.0
PJD1_k127_5355628_23 Enoyl-(Acyl carrier protein) reductase K00034,K03366 - 1.1.1.304,1.1.1.47,1.1.1.76 0.0000000000000000000000000000000000000000000000000000003465 201.0
PJD1_k127_5355628_24 regulation of RNA biosynthetic process K03567 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000005462 198.0
PJD1_k127_5355628_25 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000000000000000000000001975 179.0
PJD1_k127_5355628_26 Protein of unknown function (DUF1571) - - - 0.0000000000000000000000000000000000000000002213 169.0
PJD1_k127_5355628_27 transcriptional regulator - - - 0.0000000000000000000000000000000000003388 147.0
PJD1_k127_5355628_28 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity K02372,K16363 - 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000001168 148.0
PJD1_k127_5355628_29 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00059 - 1.1.1.100 0.000000000000000000000000000000000005017 145.0
PJD1_k127_5355628_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 599.0
PJD1_k127_5355628_30 Helix-hairpin-helix motif K02237 - - 0.0000000000000000000000001742 113.0
PJD1_k127_5355628_31 Glutaredoxin - - - 0.0000000000000000000000005853 111.0
PJD1_k127_5355628_32 - - - - 0.000000000000000000006122 93.0
PJD1_k127_5355628_33 PFAM transferase hexapeptide repeat containing protein - - - 0.00000000000006965 80.0
PJD1_k127_5355628_34 - - - - 0.000000000001081 72.0
PJD1_k127_5355628_35 TM2 domain - - - 0.000000000005629 73.0
PJD1_k127_5355628_36 nitroreductase - - - 0.000000000007691 73.0
PJD1_k127_5355628_37 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000009711 65.0
PJD1_k127_5355628_38 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000001301 68.0
PJD1_k127_5355628_39 Bacterial regulatory proteins, tetR family - - - 0.000000237 53.0
PJD1_k127_5355628_4 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 - 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 550.0
PJD1_k127_5355628_40 Phosphopantetheine attachment site - - - 0.000001699 55.0
PJD1_k127_5355628_5 PFAM outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 530.0
PJD1_k127_5355628_6 HlyD family secretion protein K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 510.0
PJD1_k127_5355628_7 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007405 515.0
PJD1_k127_5355628_8 Biotin-lipoyl like K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 500.0
PJD1_k127_5355628_9 DegT/DnrJ/EryC1/StrS aminotransferase family K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 408.0
PJD1_k127_5395201_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1405.0
PJD1_k127_5395201_1 Sensor histidine kinase, HAMP and PAS domain-containing - - - 2.912e-212 685.0
PJD1_k127_5395201_2 SMART Elongator protein 3 MiaB NifB K22227 - - 2.937e-195 612.0
PJD1_k127_5395201_3 Histidine kinase - - - 3.341e-194 619.0
PJD1_k127_5395201_4 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 466.0
PJD1_k127_5395201_5 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006325 455.0
PJD1_k127_5395201_6 PFAM ABC-2 type transporter K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007712 377.0
PJD1_k127_5395201_7 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000284 287.0
PJD1_k127_5395201_8 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.00000000000000004178 80.0
PJD1_k127_5418961_0 PFAM transposase, IS4 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 430.0
PJD1_k127_5418961_1 DDE superfamily endonuclease - - - 0.00000000000000000000000000005852 122.0
PJD1_k127_5454437_0 S1 domain K00243 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 440.0
PJD1_k127_5454437_1 DTW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002186 281.0
PJD1_k127_5454437_2 Domain of unknown function (DUF4130 - - - 0.000000000000000000000000000000000000000000000000000004567 192.0
PJD1_k127_5454437_3 4Fe-4S single cluster domain K06871 - - 0.0000000000000000000000000000000000000000000000007014 193.0
PJD1_k127_5494727_0 Aldehyde dehydrogenase family K00131 - 1.2.1.9 6.282e-279 870.0
PJD1_k127_5494727_1 CoA binding domain K09181 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 596.0
PJD1_k127_5494727_2 PFAM Protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 318.0
PJD1_k127_5494727_3 Polysaccharide deacetylase K11931 - - 0.00000000000000000000000000000000000000000000000000000000000000007883 235.0
PJD1_k127_5494727_4 PFAM ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000001459 215.0
PJD1_k127_5494727_5 peptidyl-tyrosine sulfation - - - 0.0007662 50.0
PJD1_k127_5514022_0 Dual specificity phosphatase, catalytic domain - - - 1.396e-223 716.0
PJD1_k127_5514022_1 NAD(P)H-binding K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 533.0
PJD1_k127_5514022_10 FecR protein - - - 0.000000000000000000000000000000003056 134.0
PJD1_k127_5514022_11 - - - - 0.00000000000000000000000000000006509 126.0
PJD1_k127_5514022_2 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 448.0
PJD1_k127_5514022_3 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008784 392.0
PJD1_k127_5514022_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 374.0
PJD1_k127_5514022_5 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 366.0
PJD1_k127_5514022_6 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 307.0
PJD1_k127_5514022_7 ADP-ribosylglycohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000003139 237.0
PJD1_k127_5514022_8 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000006277 168.0
PJD1_k127_5514022_9 - - - - 0.00000000000000000000000000000000008275 138.0
PJD1_k127_5524348_0 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 293.0
PJD1_k127_5524348_1 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000133 286.0
PJD1_k127_5524348_2 Cation efflux family K14696 - - 0.00000000000000000000000000000000000000000000000000000000000000004533 236.0
PJD1_k127_5524348_4 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000002114 200.0
PJD1_k127_5524348_5 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000005739 180.0
PJD1_k127_5524348_6 Galactose oxidase, central domain - - - 0.000000000000000000000000000000004108 142.0
PJD1_k127_5524348_7 Nitrite and sulphite reductase 4Fe-4S - - - 0.0000000000000000000000004427 108.0
PJD1_k127_5524348_8 PFAM RNA-binding S4 domain protein K14761 - - 0.0000000000000000000000005766 105.0
PJD1_k127_5527865_0 4Fe-4S dicluster domain - - - 1.471e-286 900.0
PJD1_k127_5527865_1 PFAM Radical SAM K06937 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 530.0
PJD1_k127_5527865_10 Sigma factor PP2C-like phosphatases K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000002835 266.0
PJD1_k127_5527865_11 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.0000000000000000000000000000000000000000000000000000000006948 209.0
PJD1_k127_5527865_12 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000002329 191.0
PJD1_k127_5527865_13 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.000000000000000000000000000000000000000000000007986 181.0
PJD1_k127_5527865_14 Protein of unknown function (DUF3396) - - - 0.000000000000000000000000000000000000000001096 169.0
PJD1_k127_5527865_15 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.000000000000000000000000000000000000004002 152.0
PJD1_k127_5527865_16 - - - - 0.00000000000000000002752 92.0
PJD1_k127_5527865_17 - - - - 0.0000000001122 70.0
PJD1_k127_5527865_2 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006773 460.0
PJD1_k127_5527865_3 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 400.0
PJD1_k127_5527865_4 PFAM Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 399.0
PJD1_k127_5527865_5 PFAM HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004816 344.0
PJD1_k127_5527865_6 Binding-protein-dependent transport system inner membrane component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006768 328.0
PJD1_k127_5527865_7 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 329.0
PJD1_k127_5527865_8 PFAM Protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 329.0
PJD1_k127_5527865_9 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006076 297.0
PJD1_k127_5562325_0 PFAM type II secretion system protein E - - - 0.0 1073.0
PJD1_k127_5562325_1 FIST N domain - - - 2.757e-264 820.0
PJD1_k127_5562325_10 ribonucleoside-diphosphate reductase activity K00525 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.17.4.1 0.000000000000000000000000000000000000000007564 156.0
PJD1_k127_5562325_11 RNA recognition motif - - - 0.0000000000000000000000000000000004862 134.0
PJD1_k127_5562325_12 Iron-sulfur cluster-binding domain - - - 0.000000000000000000005283 98.0
PJD1_k127_5562325_13 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000001474 84.0
PJD1_k127_5562325_14 - - - - 0.0000000000000006696 78.0
PJD1_k127_5562325_2 helicase superfamily c-terminal domain K11927 - 3.6.4.13 1.952e-204 643.0
PJD1_k127_5562325_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004975 400.0
PJD1_k127_5562325_4 Domains Cache_1, HAMP, PAS, PAS K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 392.0
PJD1_k127_5562325_5 Rhomboid family K19225 - 3.4.21.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 363.0
PJD1_k127_5562325_6 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 356.0
PJD1_k127_5562325_7 Small GTP-binding protein K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006608 312.0
PJD1_k127_5562325_8 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000001 212.0
PJD1_k127_5562325_9 Domains Cache_1, HAMP, PAS, PAS K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000001562 206.0
PJD1_k127_5607748_0 Belongs to the RtcB family K14415 - 6.5.1.3 3.389e-262 814.0
PJD1_k127_5607748_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 455.0
PJD1_k127_5607748_2 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008633 363.0
PJD1_k127_5607748_3 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000002669 255.0
PJD1_k127_5607748_4 Metal-dependent phosphohydrolase K06950 - - 0.0000000000000000000000000000000000000000000000000000000000000000004141 234.0
PJD1_k127_5607748_5 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000000000000000000000000001148 154.0
PJD1_k127_5607748_6 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000001151 136.0
PJD1_k127_5607748_7 RF-1 domain K15034 - - 0.00000000000000000000000000000000009536 136.0
PJD1_k127_5607748_8 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000182 124.0
PJD1_k127_5607748_9 zinc-ribbon domain - - - 0.00000000000000000001113 101.0
PJD1_k127_5614184_0 AcrB/AcrD/AcrF family - - - 0.0 1886.0
PJD1_k127_5614184_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 8.126e-294 921.0
PJD1_k127_5614184_10 3-oxoacyl-[acyl-carrier-protein] synthase activity K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005611 445.0
PJD1_k127_5614184_11 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 407.0
PJD1_k127_5614184_12 PFAM CO dehydrogenase acetyl-CoA synthase delta subunit, TIM barrel K00197 - 2.1.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 386.0
PJD1_k127_5614184_13 Serine acetyltransferase, N-terminal K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 374.0
PJD1_k127_5614184_14 Protein of unknown function (DUF2400) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 366.0
PJD1_k127_5614184_15 NUDIX domain K13988 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 370.0
PJD1_k127_5614184_16 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 342.0
PJD1_k127_5614184_17 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 338.0
PJD1_k127_5614184_18 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 319.0
PJD1_k127_5614184_19 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008632 326.0
PJD1_k127_5614184_2 PHP domain protein K07053 - 3.1.3.97 5.333e-223 700.0
PJD1_k127_5614184_20 Histidine kinase K07641,K14980 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000139 259.0
PJD1_k127_5614184_21 Iron-storage protein K02217 - 1.16.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000005893 258.0
PJD1_k127_5614184_22 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005584 253.0
PJD1_k127_5614184_23 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000006243 230.0
PJD1_k127_5614184_24 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000000000000000000001341 211.0
PJD1_k127_5614184_25 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000000000000000000000000001656 190.0
PJD1_k127_5614184_26 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000001595 160.0
PJD1_k127_5614184_27 Transcriptional regulator - - - 0.0000000000000000000000000000003171 130.0
PJD1_k127_5614184_28 Protein of unknown function (DUF3106) - - - 0.0000000000000000000000000004883 119.0
PJD1_k127_5614184_29 - - - - 0.00000000000000000000783 94.0
PJD1_k127_5614184_3 TIGRFAM para-aminobenzoate synthase, subunit I K01665,K03342 - 2.6.1.85,4.1.3.38 3.175e-197 631.0
PJD1_k127_5614184_30 - - - - 0.00000000000000001622 93.0
PJD1_k127_5614184_31 - - - - 0.000000000000005314 79.0
PJD1_k127_5614184_32 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000001963 76.0
PJD1_k127_5614184_34 - - - - 0.000000000002139 76.0
PJD1_k127_5614184_35 Protein of unknown function (DUF1450) - - - 0.000000000005084 68.0
PJD1_k127_5614184_4 amino acid-binding ACT domain protein K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 609.0
PJD1_k127_5614184_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 597.0
PJD1_k127_5614184_6 SMART Elongator protein 3 MiaB NifB K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 548.0
PJD1_k127_5614184_7 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 523.0
PJD1_k127_5614184_8 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 465.0
PJD1_k127_5614184_9 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 449.0
PJD1_k127_5614477_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 1.827e-287 902.0
PJD1_k127_5614477_1 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 3.563e-272 843.0
PJD1_k127_5614477_10 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 525.0
PJD1_k127_5614477_11 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 498.0
PJD1_k127_5614477_12 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004201 487.0
PJD1_k127_5614477_13 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 447.0
PJD1_k127_5614477_14 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 441.0
PJD1_k127_5614477_15 PFAM CBS domain containing protein K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 417.0
PJD1_k127_5614477_16 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005155 378.0
PJD1_k127_5614477_17 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 375.0
PJD1_k127_5614477_18 N-terminal domain of galactosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 372.0
PJD1_k127_5614477_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008343 351.0
PJD1_k127_5614477_2 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 2.369e-253 792.0
PJD1_k127_5614477_20 Prokaryotic diacylglycerol kinase K00901 - 2.7.1.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 324.0
PJD1_k127_5614477_21 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 340.0
PJD1_k127_5614477_22 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 314.0
PJD1_k127_5614477_23 PFAM NLP P60 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009025 314.0
PJD1_k127_5614477_24 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003906 308.0
PJD1_k127_5614477_25 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000005665 237.0
PJD1_k127_5614477_26 Metal-dependent phosphohydrolase K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000001004 223.0
PJD1_k127_5614477_27 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001192 234.0
PJD1_k127_5614477_28 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000005922 231.0
PJD1_k127_5614477_29 Outer membrane protein (OmpH-like) K06142 - - 0.000000000000000000000000000000000000000000000000000008649 195.0
PJD1_k127_5614477_3 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 1.573e-230 727.0
PJD1_k127_5614477_30 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000000000001567 160.0
PJD1_k127_5614477_31 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000836 130.0
PJD1_k127_5614477_32 Phosphopantetheine attachment site K02078 - - 0.00000000000000000000007858 103.0
PJD1_k127_5614477_33 Belongs to the UPF0434 family K09791 - - 0.000000000000001868 78.0
PJD1_k127_5614477_4 PFAM membrane bound O-acyl transferase MBOAT family protein K19294 - - 4.469e-206 651.0
PJD1_k127_5614477_5 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 2.894e-200 637.0
PJD1_k127_5614477_6 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 583.0
PJD1_k127_5614477_7 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 584.0
PJD1_k127_5614477_8 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 575.0
PJD1_k127_5614477_9 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 555.0
PJD1_k127_5691778_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1050.0
PJD1_k127_5691778_1 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 1.74e-213 683.0
PJD1_k127_5691778_10 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 507.0
PJD1_k127_5691778_11 Monogalactosyldiacylglycerol (MGDG) synthase K03429,K03715 - 2.4.1.315,2.4.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000535 460.0
PJD1_k127_5691778_12 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 421.0
PJD1_k127_5691778_13 PFAM ResB family protein K07399 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 414.0
PJD1_k127_5691778_14 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 400.0
PJD1_k127_5691778_15 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004772 348.0
PJD1_k127_5691778_16 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 315.0
PJD1_k127_5691778_17 e3 binding domain K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 302.0
PJD1_k127_5691778_18 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000495 261.0
PJD1_k127_5691778_19 - - - - 0.000000000000000000000000000000000000000000000000000000004838 203.0
PJD1_k127_5691778_2 MFS/sugar transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 562.0
PJD1_k127_5691778_20 FR47-like protein - - - 0.000000000000000000000000000000000000000000000000000004046 194.0
PJD1_k127_5691778_21 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000001583 177.0
PJD1_k127_5691778_23 - - - - 0.000008062 55.0
PJD1_k127_5691778_3 histidine kinase HAMP region domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 554.0
PJD1_k127_5691778_4 Glycosyltransferase like family 2 K10012 - 2.4.2.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005062 505.0
PJD1_k127_5691778_5 Transketolase, pyrimidine binding domain K00162,K00167 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 502.0
PJD1_k127_5691778_6 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 501.0
PJD1_k127_5691778_7 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 503.0
PJD1_k127_5691778_8 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 492.0
PJD1_k127_5691778_9 Mur ligase, middle domain protein K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007895 492.0
PJD1_k127_5692718_0 HD domain K18967 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000886 264.0
PJD1_k127_5692718_1 alginic acid biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000003992 188.0
PJD1_k127_5692718_2 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000000000057 141.0
PJD1_k127_5693312_0 Methionine synthase B12-binding module cap domain protein K00548 - 2.1.1.13 0.0 1143.0
PJD1_k127_5693312_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0 1012.0
PJD1_k127_5693312_10 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 431.0
PJD1_k127_5693312_11 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 409.0
PJD1_k127_5693312_12 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 393.0
PJD1_k127_5693312_13 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 293.0
PJD1_k127_5693312_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001135 246.0
PJD1_k127_5693312_15 PFAM MOSC domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000005789 228.0
PJD1_k127_5693312_16 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000004727 209.0
PJD1_k127_5693312_17 PFAM Amidohydrolase 2 K01686 - 4.2.1.8 0.0000000000000000000000000000000000000000000000000000003086 196.0
PJD1_k127_5693312_18 Sporulation and spore germination - - - 0.000000000000000000000000000000000000000000000000003607 189.0
PJD1_k127_5693312_19 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000000000000001039 130.0
PJD1_k127_5693312_2 PFAM aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 8.828e-283 878.0
PJD1_k127_5693312_20 - - - - 0.000000000000000000000000000000002009 133.0
PJD1_k127_5693312_21 - - - - 0.0000000000000000000002405 99.0
PJD1_k127_5693312_22 - - - - 0.0000000000000000006917 94.0
PJD1_k127_5693312_23 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000000000000001328 78.0
PJD1_k127_5693312_24 BadF/BadG/BcrA/BcrD ATPase family - - - 0.00000000000002 76.0
PJD1_k127_5693312_25 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.0000002099 53.0
PJD1_k127_5693312_26 Carotenoid biosynthesis protein - - - 0.00002767 51.0
PJD1_k127_5693312_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.307e-247 770.0
PJD1_k127_5693312_4 Tfp pilus assembly protein FimV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007851 576.0
PJD1_k127_5693312_5 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 526.0
PJD1_k127_5693312_6 PFAM Iron-containing alcohol dehydrogenase K13954 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009555 505.0
PJD1_k127_5693312_7 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 489.0
PJD1_k127_5693312_8 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 471.0
PJD1_k127_5693312_9 PFAM Transketolase domain protein K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 447.0
PJD1_k127_5718872_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1381.0
PJD1_k127_5718872_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 2.821e-210 657.0
PJD1_k127_5718872_10 4-vinyl reductase, 4VR - - - 0.00000000000000000000000000891 115.0
PJD1_k127_5718872_11 Plasmid stabilization system - - - 0.00000000000000000000000145 105.0
PJD1_k127_5718872_12 4Fe-4S dicluster domain - - - 0.0000000000004318 78.0
PJD1_k127_5718872_13 PFAM CopG domain protein DNA-binding domain protein - - - 0.0000000005384 63.0
PJD1_k127_5718872_15 spore germination K03605,K06012 GO:0000003,GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019954,GO:0030436,GO:0032502,GO:0043170,GO:0043934,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.24.78 0.0000001649 59.0
PJD1_k127_5718872_17 Protein of unknown function (DUF541) K09807 - - 0.0005841 49.0
PJD1_k127_5718872_2 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005606 586.0
PJD1_k127_5718872_3 Thermophilic metalloprotease (M29) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 502.0
PJD1_k127_5718872_4 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966 477.0
PJD1_k127_5718872_5 PFAM Nickel-dependent hydrogenase, large subunit K14126 - 1.8.98.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007532 406.0
PJD1_k127_5718872_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 342.0
PJD1_k127_5718872_7 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K14128 - 1.8.98.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 318.0
PJD1_k127_5718872_8 Histidine kinase K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000003624 240.0
PJD1_k127_5718872_9 CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000005928 228.0
PJD1_k127_5721369_0 HMGL-like K01666 - 4.1.3.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 400.0
PJD1_k127_5721369_1 Membrane K08984 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000074 231.0
PJD1_k127_5721369_2 Aldolase K01625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000000003982 161.0
PJD1_k127_5721369_3 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000006079 130.0
PJD1_k127_5721369_4 Protein of unknown function (DUF1444) - - - 0.000000000000000000000000004947 114.0
PJD1_k127_5721369_5 SdpI/YhfL protein family - - - 0.00000000000000000000004361 104.0
PJD1_k127_5721369_6 EthD domain - - - 0.000000000002818 69.0
PJD1_k127_5721369_7 PFAM Band 7 protein - - - 0.0000000004449 60.0
PJD1_k127_5722710_0 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 1.622e-198 637.0
PJD1_k127_5722710_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 493.0
PJD1_k127_5722710_10 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.0000000000000003179 89.0
PJD1_k127_5722710_12 Transcriptional regulator - - - 0.0000002589 60.0
PJD1_k127_5722710_2 Methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 447.0
PJD1_k127_5722710_3 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009762 385.0
PJD1_k127_5722710_4 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 316.0
PJD1_k127_5722710_5 Methyltransferase, chemotaxis proteins K00575,K03411,K03412 - 2.1.1.80,3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000005616 157.0
PJD1_k127_5722710_6 Ankyrin repeat - - - 0.000000000000000000000000000000000000002961 150.0
PJD1_k127_5722710_7 - - - - 0.00000000000000000000000003651 115.0
PJD1_k127_5722710_8 Iron-sulfur cluster-binding domain K22227 - - 0.00000000000000000000005598 109.0
PJD1_k127_5722710_9 Acetyltransferase (GNAT) domain - - - 0.0000000000000000001231 95.0
PJD1_k127_575199_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1138.0
PJD1_k127_575199_1 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300,K08301 - 3.1.26.12 2.392e-268 845.0
PJD1_k127_575199_10 PFAM glycosyl transferase family 2 K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006313 457.0
PJD1_k127_575199_11 belongs to the thioredoxin family K02453,K07280,K20444,K20543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009145 450.0
PJD1_k127_575199_12 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 374.0
PJD1_k127_575199_13 repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 368.0
PJD1_k127_575199_14 Signal transduction protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 354.0
PJD1_k127_575199_15 Glycosyltransferase like family 2 K07011,K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 390.0
PJD1_k127_575199_16 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 333.0
PJD1_k127_575199_17 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000007951 252.0
PJD1_k127_575199_18 SAM-dependent RNA methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002008 236.0
PJD1_k127_575199_19 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000004472 229.0
PJD1_k127_575199_2 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 7.022e-251 787.0
PJD1_k127_575199_20 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000002295 226.0
PJD1_k127_575199_21 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000005638 203.0
PJD1_k127_575199_22 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000000000000000000000000003214 194.0
PJD1_k127_575199_23 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000000000000000001827 154.0
PJD1_k127_575199_24 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000001156 149.0
PJD1_k127_575199_25 Belongs to the UPF0109 family K06960 - - 0.00000000000000000000000000000002347 128.0
PJD1_k127_575199_26 FIST C domain - - - 0.000000000000000000305 89.0
PJD1_k127_575199_27 PFAM Glycosyl transferase family 2 - - - 0.000000000101 65.0
PJD1_k127_575199_3 PFAM ABC transporter related K06158 - - 4.078e-250 789.0
PJD1_k127_575199_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.017e-230 720.0
PJD1_k127_575199_5 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 576.0
PJD1_k127_575199_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008539 490.0
PJD1_k127_575199_7 Metal-dependent phosphohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 439.0
PJD1_k127_575199_8 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006438 442.0
PJD1_k127_575199_9 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 426.0
PJD1_k127_5754899_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000003347 181.0
PJD1_k127_5754899_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000006096 132.0
PJD1_k127_5754899_2 Phospholipase_D-nuclease N-terminal - - - 0.000004035 51.0
PJD1_k127_5766487_0 PFAM AMP-dependent synthetase and ligase K04110 - 6.2.1.25 2.598e-197 626.0
PJD1_k127_5766487_1 Response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009219 576.0
PJD1_k127_5766487_2 Histidine kinase K02660,K11525 - - 0.000000000000000000000000000000000000000000000000000000000000000001653 239.0
PJD1_k127_5766487_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000002148 134.0
PJD1_k127_5766487_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078,K22463 - - 0.0000000000000859 74.0
PJD1_k127_5805179_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 1.5e-323 1021.0
PJD1_k127_5805179_1 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 6.016e-312 961.0
PJD1_k127_5805179_10 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 407.0
PJD1_k127_5805179_11 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006895 415.0
PJD1_k127_5805179_12 Belongs to the pseudouridine synthase RluA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 377.0
PJD1_k127_5805179_13 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 323.0
PJD1_k127_5805179_14 TIGRFAM Ni Fe-hydrogenase, b-type cytochrome subunit K03620 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 293.0
PJD1_k127_5805179_15 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001025 253.0
PJD1_k127_5805179_16 Putative cyclase K07130 - 3.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000002359 247.0
PJD1_k127_5805179_17 Domain of unknown function (DUF4337) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001312 238.0
PJD1_k127_5805179_18 ribosomal large subunit export from nucleus - - - 0.00000000000000000000000000000000000000000000000000000000000000000008862 235.0
PJD1_k127_5805179_19 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000000000000000000000000006668 226.0
PJD1_k127_5805179_2 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 1.098e-271 842.0
PJD1_k127_5805179_20 PFAM CheW domain protein K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000001787 225.0
PJD1_k127_5805179_21 NosL - - - 0.000000000000000000000000000000000000000000000000000000000000005152 222.0
PJD1_k127_5805179_22 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.00000000000000000000000000000000000000000000000000000000000001034 218.0
PJD1_k127_5805179_23 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000001218 207.0
PJD1_k127_5805179_24 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000000000000106 172.0
PJD1_k127_5805179_25 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000002477 147.0
PJD1_k127_5805179_26 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000002467 136.0
PJD1_k127_5805179_27 - - - - 0.00000000000000000000000000256 115.0
PJD1_k127_5805179_28 Receptor - - - 0.000000000001358 80.0
PJD1_k127_5805179_3 PFAM aminotransferase, class I and II K00814 - 2.6.1.2 6.688e-239 744.0
PJD1_k127_5805179_4 NapC/NirT cytochrome c family, N-terminal region - GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 1.277e-225 709.0
PJD1_k127_5805179_5 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282,K18008 - 1.12.2.1,1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000537 601.0
PJD1_k127_5805179_6 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 598.0
PJD1_k127_5805179_7 Chemotaxis sensory transducer K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 611.0
PJD1_k127_5805179_8 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 580.0
PJD1_k127_5805179_9 histidine kinase A domain protein domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 445.0
PJD1_k127_5815580_0 hydrolase activity, hydrolyzing O-glycosyl compounds K01176,K22253 - 3.2.1.1,3.2.1.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 569.0
PJD1_k127_5815580_1 Alpha/beta hydrolase of unknown function (DUF1100) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 519.0
PJD1_k127_5815580_2 - - - - 0.000008518 51.0
PJD1_k127_5829864_0 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 2.057e-284 889.0
PJD1_k127_5829864_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K14086 - - 5.955e-282 880.0
PJD1_k127_5829864_10 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000001093 254.0
PJD1_k127_5829864_11 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000000000000000000000000000000004685 227.0
PJD1_k127_5829864_12 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K14089 - - 0.000000000000000000000000000000000000000006655 158.0
PJD1_k127_5829864_13 - - - - 0.00000000000000000000000000000000000000103 156.0
PJD1_k127_5829864_14 Essential cell division protein - - - 0.000000000000000000000000000000000000005848 148.0
PJD1_k127_5829864_15 4Fe-4S dicluster domain K14091 - - 0.00000000000000000000000000000000000008001 145.0
PJD1_k127_5829864_16 - - - - 0.000000000000000000000000000000000001461 143.0
PJD1_k127_5829864_17 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000007793 105.0
PJD1_k127_5829864_18 LppC putative lipoprotein - - - 0.0000000000127 73.0
PJD1_k127_5829864_19 PFAM phosphate acetyl butaryl transferase K00625,K13788 - 2.3.1.8 0.000000001409 60.0
PJD1_k127_5829864_2 Aldehyde dehydrogenase family K00001,K04072 - 1.1.1.1,1.2.1.10 2.332e-242 754.0
PJD1_k127_5829864_20 - - - - 0.0001548 46.0
PJD1_k127_5829864_3 PFAM NADH-ubiquinone oxidoreductase, chain 49kDa K00333,K14090 - 1.6.5.3 1.34e-202 635.0
PJD1_k127_5829864_4 NADH dehydrogenase K14087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006754 446.0
PJD1_k127_5829864_5 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 442.0
PJD1_k127_5829864_6 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 397.0
PJD1_k127_5829864_7 GTP cyclohydrolase activity K01495,K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 303.0
PJD1_k127_5829864_8 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K14088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003834 292.0
PJD1_k127_5829864_9 TIGRFAM Hydrogenase accessory protein HypB K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004322 273.0
PJD1_k127_5832549_0 Alpha-2-Macroglobulin K06894 - - 0.0 1494.0
PJD1_k127_5832549_1 SPFH domain / Band 7 family - - - 8.032e-253 794.0
PJD1_k127_5832549_10 ferrous iron binding K06990,K09141 - - 0.00000000000000000000000000000000000000000003742 169.0
PJD1_k127_5832549_11 FecR protein - - - 0.000000000000000000000000000000000000001224 153.0
PJD1_k127_5832549_12 PFAM OmpA MotB domain protein - - - 0.000000000000000000000000000000000001654 146.0
PJD1_k127_5832549_13 - - - - 0.0000000000000000000000000002162 126.0
PJD1_k127_5832549_14 PFAM Peptidoglycan-binding LysM - - - 0.00000000003462 74.0
PJD1_k127_5832549_2 Chase2 domain K01768,K07814 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 559.0
PJD1_k127_5832549_3 TIGRFAM cysteine desulfurase family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000585 494.0
PJD1_k127_5832549_4 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 422.0
PJD1_k127_5832549_5 Peptidase C13 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008461 342.0
PJD1_k127_5832549_6 PFAM VanW family protein K18346 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004307 256.0
PJD1_k127_5832549_7 nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002008 236.0
PJD1_k127_5832549_8 TIGRFAM signal peptidase I K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000001593 203.0
PJD1_k127_5832549_9 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000001813 166.0
PJD1_k127_5847429_0 type II and III secretion system protein K02453 - - 1.512e-207 676.0
PJD1_k127_5847429_1 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000000000000000000000000000000000000005593 233.0
PJD1_k127_5847429_2 Pfam:N_methyl_2 K02456 - - 0.000000000000000000000000000000000000000000001591 171.0
PJD1_k127_5881748_0 Response regulator, receiver - - - 0.0 1125.0
PJD1_k127_5881748_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 1.165e-240 749.0
PJD1_k127_5881748_10 Cell wall formation K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 426.0
PJD1_k127_5881748_11 ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006022 413.0
PJD1_k127_5881748_12 Cell wall formation K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008291 283.0
PJD1_k127_5881748_13 HWE histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003748 272.0
PJD1_k127_5881748_14 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.0000000000000000000000000000000000000000000001726 169.0
PJD1_k127_5881748_15 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000002363 168.0
PJD1_k127_5881748_16 Uncharacterised protein family (UPF0158) - - - 0.00000000000000000000000000000000001415 144.0
PJD1_k127_5881748_17 - - - - 0.00000000000000000000000001443 112.0
PJD1_k127_5881748_2 UDP-N-acetylmuramate-L-alanine ligase activity K01924 - 6.3.2.8 3.498e-237 739.0
PJD1_k127_5881748_20 - - - - 0.0000002191 61.0
PJD1_k127_5881748_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 595.0
PJD1_k127_5881748_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 596.0
PJD1_k127_5881748_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 589.0
PJD1_k127_5881748_6 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 546.0
PJD1_k127_5881748_7 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 535.0
PJD1_k127_5881748_8 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 500.0
PJD1_k127_5881748_9 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 465.0
PJD1_k127_5882053_0 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296,K18138 - - 0.0 1763.0
PJD1_k127_5882053_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 2.066e-203 644.0
PJD1_k127_5882053_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008402 587.0
PJD1_k127_5882053_3 Tetracycline repressor, C-terminal all-alpha domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007037 280.0
PJD1_k127_5882053_4 zinc-ribbon family - - - 0.000000000000000000000000000000000000000002288 164.0
PJD1_k127_5882053_5 histidine kinase HAMP region domain protein K03406 - - 0.00000000001444 67.0
PJD1_k127_5908199_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1658.0
PJD1_k127_5908199_1 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 8.513e-259 810.0
PJD1_k127_5908199_2 Belongs to the alpha-IPM synthase homocitrate synthase family K02594 - 2.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 534.0
PJD1_k127_5908199_3 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 407.0
PJD1_k127_5908199_4 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 307.0
PJD1_k127_5908199_5 nickel-responsive regulator K07722 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004085 267.0
PJD1_k127_5908199_6 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000000000000000000000000000000000000000000262 167.0
PJD1_k127_5908199_7 Glycine zipper 2TM domain - - - 0.00000000000000000000000000000199 126.0
PJD1_k127_5932574_0 two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 340.0
PJD1_k127_5932574_1 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.00000000000000000000000000000000000000000000000000000000005778 211.0
PJD1_k127_5932574_2 Transglycosylase K05366,K21464 - 2.4.1.129,3.4.16.4 0.00000000773 60.0
PJD1_k127_5932574_3 Histidine kinase - - - 0.00000002527 58.0
PJD1_k127_5934433_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 4.203e-261 811.0
PJD1_k127_5934433_1 Putative metallopeptidase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 612.0
PJD1_k127_5934433_10 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process - - - 0.0000000000000000000000000000000000000000000004321 170.0
PJD1_k127_5934433_11 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K19548 - 1.1.1.385 0.00000000000000000000000000000000000000001764 162.0
PJD1_k127_5934433_12 Histidine kinase - - - 0.000000000000000000000000000000000002221 156.0
PJD1_k127_5934433_13 - - - - 0.000000000000000000000000000000002613 136.0
PJD1_k127_5934433_14 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000005268 137.0
PJD1_k127_5934433_15 domain protein - - - 0.0000000000000000000000003027 114.0
PJD1_k127_5934433_17 PFAM GGDEF domain containing protein - - - 0.00000000000000000000002538 106.0
PJD1_k127_5934433_19 PAN domain - - - 0.0000000000000000007959 95.0
PJD1_k127_5934433_2 AAA domain (dynein-related subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009556 597.0
PJD1_k127_5934433_21 Protein of unknown function (DUF2628) - - - 0.0000000000000008293 91.0
PJD1_k127_5934433_23 PFAM GGDEF domain containing protein - - - 0.00000002141 57.0
PJD1_k127_5934433_25 Chromosomal replication initiator, DnaA K07491 - - 0.00000003677 55.0
PJD1_k127_5934433_27 TfoX N-terminal domain - - - 0.00002868 47.0
PJD1_k127_5934433_3 FIST N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 537.0
PJD1_k127_5934433_4 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006349 503.0
PJD1_k127_5934433_5 PFAM Radical SAM domain protein K06871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007056 460.0
PJD1_k127_5934433_6 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 394.0
PJD1_k127_5934433_7 membrane-anchored protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002008 287.0
PJD1_k127_5934433_8 Acetyltransferase (GNAT) domain K03824 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003215 278.0
PJD1_k127_5934433_9 translation initiation factor activity K06996 - - 0.000000000000000000000000000000000000000000000000000000002183 203.0
PJD1_k127_5966783_0 Histidine kinase K07646 - 2.7.13.3 0.0 1157.0
PJD1_k127_5966783_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.0 1134.0
PJD1_k127_5966783_2 TIGRFAM L-lactate transport K03303 - - 2.919e-231 728.0
PJD1_k127_5966783_3 Two component transcriptional regulator, winged helix family K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 365.0
PJD1_k127_5966783_4 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031420,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009889 336.0
PJD1_k127_5966783_5 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 286.0
PJD1_k127_5966783_6 Protein of unknown function (DUF4019) - - - 0.0000000000000000000000000000000000000006725 153.0
PJD1_k127_5966783_7 - - - - 0.00000000000000000000000000001807 124.0
PJD1_k127_5966783_8 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000004818 70.0
PJD1_k127_599829_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0 1371.0
PJD1_k127_599829_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K00966,K16881 - 2.7.7.13,5.4.2.8 0.0 1309.0
PJD1_k127_599829_10 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008933 576.0
PJD1_k127_599829_11 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 563.0
PJD1_k127_599829_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 547.0
PJD1_k127_599829_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009178 502.0
PJD1_k127_599829_14 Aminotransferase class I and II K04720 - 4.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 441.0
PJD1_k127_599829_15 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 355.0
PJD1_k127_599829_16 4Fe-4S dicluster domain K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 313.0
PJD1_k127_599829_17 nitrite sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 307.0
PJD1_k127_599829_18 PFAM 4-vinyl reductase, 4VR K07013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002474 254.0
PJD1_k127_599829_19 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002948 252.0
PJD1_k127_599829_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1133.0
PJD1_k127_599829_20 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000003619 248.0
PJD1_k127_599829_21 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007532 243.0
PJD1_k127_599829_22 deaminase K01485 - 3.5.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000001233 242.0
PJD1_k127_599829_23 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000003955 208.0
PJD1_k127_599829_24 Ankyrin repeat - - - 0.00000000000000000000000000000000000000000000000000000009184 198.0
PJD1_k127_599829_25 Response receiver sensor diguanylate cyclase, PAS domain-containing - - - 0.0000000000000000000000000000000000000000000000004897 186.0
PJD1_k127_599829_26 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.00000000000000000000000000000000000000000000001755 174.0
PJD1_k127_599829_27 Cytochrome C oxidase, cbb3-type, subunit III K08906 - - 0.000000000000000000000000000000000000000000002627 167.0
PJD1_k127_599829_28 - - - - 0.0000000000000000000000000000000000000000002341 164.0
PJD1_k127_599829_29 CRS1_YhbY K07574 - - 0.0000000000000000000000000000000000000005317 149.0
PJD1_k127_599829_3 Glycosyl hydrolase family 57 - - - 2.822e-314 977.0
PJD1_k127_599829_30 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000000007284 154.0
PJD1_k127_599829_31 Domain of Unknown Function (DUF350) K08989 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000006391 149.0
PJD1_k127_599829_32 cheY-homologous receiver domain - - - 0.0000000000000000000000000000001035 128.0
PJD1_k127_599829_35 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000004469 108.0
PJD1_k127_599829_36 PFAM phosphoesterase, PA-phosphatase related - - - 0.00000000000000000000000208 111.0
PJD1_k127_599829_37 RHS protein - - - 0.00000000000000000000006478 101.0
PJD1_k127_599829_38 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000000477 81.0
PJD1_k127_599829_39 COG3209 Rhs family protein - - - 0.00001053 49.0
PJD1_k127_599829_4 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 2.631e-277 867.0
PJD1_k127_599829_40 Tetratricopeptide TPR_2 repeat protein - - - 0.0002518 51.0
PJD1_k127_599829_5 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 1.152e-238 754.0
PJD1_k127_599829_6 TIGRFAM YidE YbjL duplication K07085 - - 1.728e-231 727.0
PJD1_k127_599829_7 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00334,K00335 - 1.6.5.3 2.591e-230 717.0
PJD1_k127_599829_8 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 5.267e-209 659.0
PJD1_k127_599829_9 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 598.0
PJD1_k127_6006250_0 Cation transporter/ATPase, N-terminus K01537,K01539 - 3.6.3.8,3.6.3.9 0.0 1425.0
PJD1_k127_6006250_1 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 0.0 1360.0
PJD1_k127_6006250_10 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 460.0
PJD1_k127_6006250_11 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 431.0
PJD1_k127_6006250_12 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 398.0
PJD1_k127_6006250_13 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 373.0
PJD1_k127_6006250_14 Putative heavy-metal chelation K09138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009622 344.0
PJD1_k127_6006250_15 oxidase subunit K08738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005054 312.0
PJD1_k127_6006250_16 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006019 290.0
PJD1_k127_6006250_17 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001341 282.0
PJD1_k127_6006250_18 family UPF0066 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004585 254.0
PJD1_k127_6006250_19 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000004084 232.0
PJD1_k127_6006250_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1092.0
PJD1_k127_6006250_20 MoaE protein K03635 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000000000000003825 221.0
PJD1_k127_6006250_21 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000000000000001514 201.0
PJD1_k127_6006250_22 - - - - 0.00000000000000000000000000000000000000000000000000000005351 199.0
PJD1_k127_6006250_23 trehalose biosynthetic process K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000000000000008759 201.0
PJD1_k127_6006250_24 Belongs to the Fur family K09825 - - 0.000000000000000000000000000000000000000000000000001297 186.0
PJD1_k127_6006250_25 Adenosine specific kinase K09129 - - 0.00000000000000000000000000000000000000000000002716 172.0
PJD1_k127_6006250_26 COG2335, Secreted and surface protein containing fasciclin-like repeats - - - 0.00000000000000000000000000000000000000000001668 165.0
PJD1_k127_6006250_27 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000001698 166.0
PJD1_k127_6006250_28 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000001266 164.0
PJD1_k127_6006250_29 SpoIIAA-like - - - 0.000000000000000000000000000000000002907 145.0
PJD1_k127_6006250_3 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 2.709e-309 963.0
PJD1_k127_6006250_30 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis protein - - - 0.000000000000000000000000000000001766 133.0
PJD1_k127_6006250_31 Protein of unknown function DUF134 - - - 0.000000000000000000000000000000555 124.0
PJD1_k127_6006250_32 Mechanosensitive ion channel - - - 0.000000000000000000003962 96.0
PJD1_k127_6006250_33 membrane protein (DUF2078) K08982 - - 0.000001373 50.0
PJD1_k127_6006250_34 SseB protein N-terminal domain - - - 0.00001663 51.0
PJD1_k127_6006250_35 Alpha amylase, catalytic domain K06044 - 5.4.99.15 0.0001193 46.0
PJD1_k127_6006250_36 Methyltransferase domain - - - 0.0001691 49.0
PJD1_k127_6006250_4 Cytochrome bd terminal oxidase subunit I - - - 2.523e-219 695.0
PJD1_k127_6006250_5 Cytochrome c bacterial - - - 3.118e-196 623.0
PJD1_k127_6006250_6 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 GO:0003674,GO:0005215,GO:0005451,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015491,GO:0015672,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0035725,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0098655,GO:0098660,GO:0098662,GO:0099516,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004302 561.0
PJD1_k127_6006250_7 PFAM Glycosyl transferases group 1 K13057 - 2.4.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 546.0
PJD1_k127_6006250_8 NhaP-type Na H and K H - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 520.0
PJD1_k127_6006250_9 PFAM zinc iron permease K07238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 449.0
PJD1_k127_6050530_0 precorrin-4 C11-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 414.0
PJD1_k127_6050530_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 359.0
PJD1_k127_6050530_2 AAA domain, putative AbiEii toxin, Type IV TA system K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 292.0
PJD1_k127_6050530_3 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000201 284.0
PJD1_k127_6050530_4 Cytidine and deoxycytidylate deaminase zinc-binding region - - - 0.00000000000000000000000000000000000000000000000002673 187.0
PJD1_k127_6050530_5 Putative heavy-metal chelation K09138 - - 0.0000000000000000000000000000000000000000001503 168.0
PJD1_k127_6050530_6 Periplasmic binding protein - - - 0.00000000000000000000000000000000000000000635 169.0
PJD1_k127_6050530_7 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000005717 157.0
PJD1_k127_6050530_8 FecCD transport family K02015 - - 0.0000166 49.0
PJD1_k127_6070271_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000002477 218.0
PJD1_k127_6070271_1 endonuclease activity - - - 0.000000000000000000000000000000000000000000000000000009538 189.0
PJD1_k127_6070271_2 YadA-like membrane anchor domain - - - 0.000000000000000000000000000000000000000000000000011 198.0
PJD1_k127_6070271_3 acetyltransferase - - - 0.0000000000000000000000000000000000000000000001745 175.0
PJD1_k127_6070271_5 Hep Hag repeat protein - - - 0.00000000000000000000000000000000001692 147.0
PJD1_k127_6070271_6 Chaperone of endosialidase - - - 0.000000000000000000002542 108.0
PJD1_k127_6070271_7 formyl-CoA transferase activity - - - 0.0000000000000000003989 92.0
PJD1_k127_6070271_8 SMI1-KNR4 cell-wall - - - 0.000000000000005608 80.0
PJD1_k127_6086885_0 Belongs to the peptidase S16 family K04076 - 3.4.21.53 0.0 1184.0
PJD1_k127_6086885_1 TIGRFAM 2-oxoglutarate dehydrogenase, E1 subunit K00164 - 1.2.4.2 0.0 1113.0
PJD1_k127_6086885_10 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 476.0
PJD1_k127_6086885_11 PFAM penicillin-binding protein transpeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 477.0
PJD1_k127_6086885_12 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00627,K00658 - 2.3.1.12,2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 473.0
PJD1_k127_6086885_13 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 396.0
PJD1_k127_6086885_14 ABC transporter substrate binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 387.0
PJD1_k127_6086885_15 of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 374.0
PJD1_k127_6086885_16 ABC transporter substrate binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 362.0
PJD1_k127_6086885_17 Metallopeptidase family M24 K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 350.0
PJD1_k127_6086885_18 pfkB family carbohydrate kinase K00847,K00852 - 2.7.1.15,2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 349.0
PJD1_k127_6086885_19 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004785 334.0
PJD1_k127_6086885_2 Aconitase C-terminal domain K01681 - 4.2.1.3 0.0 1064.0
PJD1_k127_6086885_20 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005291 310.0
PJD1_k127_6086885_21 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 319.0
PJD1_k127_6086885_22 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 303.0
PJD1_k127_6086885_23 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007224 295.0
PJD1_k127_6086885_24 PFAM diacylglycerol kinase catalytic region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004847 285.0
PJD1_k127_6086885_25 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002998 283.0
PJD1_k127_6086885_26 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005587 277.0
PJD1_k127_6086885_27 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009543 273.0
PJD1_k127_6086885_28 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004775 265.0
PJD1_k127_6086885_29 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008671 281.0
PJD1_k127_6086885_3 General secretory system II, protein E domain protein K02454 - - 2.267e-276 861.0
PJD1_k127_6086885_30 Ribosomal protein S5, C-terminal domain K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000005691 243.0
PJD1_k127_6086885_31 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000006883 234.0
PJD1_k127_6086885_32 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000001451 234.0
PJD1_k127_6086885_33 radical SAM domain protein K22226 - - 0.00000000000000000000000000000000000000000000000000000000000000000001778 248.0
PJD1_k127_6086885_34 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003914 236.0
PJD1_k127_6086885_35 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000000000000005818 240.0
PJD1_k127_6086885_36 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001915 222.0
PJD1_k127_6086885_37 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000001965 226.0
PJD1_k127_6086885_38 Uncharacterised protein family (UPF0158) - - - 0.000000000000000000000000000000000000000000000000000000000001288 213.0
PJD1_k127_6086885_39 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000001823 210.0
PJD1_k127_6086885_4 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.372e-214 673.0
PJD1_k127_6086885_40 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000005888 205.0
PJD1_k127_6086885_41 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000002392 195.0
PJD1_k127_6086885_42 D-alanine [D-alanyl carrier protein] ligase activity - - - 0.0000000000000000000000000000000000000000000000000000003717 211.0
PJD1_k127_6086885_43 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000006967 193.0
PJD1_k127_6086885_44 Heavy-metal-associated domain K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000007888 187.0
PJD1_k127_6086885_45 its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity) K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000001706 178.0
PJD1_k127_6086885_46 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000000001001 172.0
PJD1_k127_6086885_47 COG2335, Secreted and surface protein containing fasciclin-like repeats - - - 0.0000000000000000000000000000000000000000000001756 171.0
PJD1_k127_6086885_48 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000001652 167.0
PJD1_k127_6086885_49 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000004687 160.0
PJD1_k127_6086885_5 His Kinase A (phosphoacceptor) domain - - - 3.641e-194 637.0
PJD1_k127_6086885_50 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000211 148.0
PJD1_k127_6086885_51 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000004536 146.0
PJD1_k127_6086885_52 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000005966 116.0
PJD1_k127_6086885_53 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000003636 115.0
PJD1_k127_6086885_54 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000001335 96.0
PJD1_k127_6086885_55 Ribosomal protein L30 K02907 - - 0.000000000000342 71.0
PJD1_k127_6086885_56 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000001573 67.0
PJD1_k127_6086885_57 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000001938 64.0
PJD1_k127_6086885_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 591.0
PJD1_k127_6086885_7 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 568.0
PJD1_k127_6086885_8 PFAM Transketolase central region K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 551.0
PJD1_k127_6086885_9 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 GO:0000166,GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005507,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009507,GO:0009536,GO:0010035,GO:0010038,GO:0016020,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0017076,GO:0019866,GO:0030554,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0046686,GO:0046872,GO:0046914,GO:0048046,GO:0050896,GO:0050897,GO:0055114,GO:0070469,GO:0097159,GO:0097367,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 486.0
PJD1_k127_6113156_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1366.0
PJD1_k127_6113156_1 PFAM type II secretion system protein E K02669 - - 2.886e-197 619.0
PJD1_k127_6113156_10 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000001228 242.0
PJD1_k127_6113156_11 Modulates RecA activity K03565 - - 0.0000000000000000000000000000000000000003928 155.0
PJD1_k127_6113156_12 MarC family integral membrane protein - - - 0.000000000000000000000000000000000000002802 163.0
PJD1_k127_6113156_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 583.0
PJD1_k127_6113156_3 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 566.0
PJD1_k127_6113156_4 PFAM peptidase M16 domain protein K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 533.0
PJD1_k127_6113156_5 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004938 516.0
PJD1_k127_6113156_6 Competence-damaged protein K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 465.0
PJD1_k127_6113156_7 PFAM glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009623 446.0
PJD1_k127_6113156_8 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 407.0
PJD1_k127_6113156_9 PFAM 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000665 361.0
PJD1_k127_6126525_0 Multicopper oxidase - - - 5.765e-283 921.0
PJD1_k127_6126525_1 Belongs to the peptidase M16 family - - - 4.646e-222 697.0
PJD1_k127_6126525_2 PFAM peptidase M16 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004045 486.0
PJD1_k127_6126525_3 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 457.0
PJD1_k127_6126525_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007455 379.0
PJD1_k127_6126525_5 peptidyl-prolyl cis-trans isomerase K03773 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005623,GO:0006457,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009279,GO:0009987,GO:0016020,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044462,GO:0044464,GO:0071704,GO:0071944,GO:0140096,GO:1901564 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000003832 238.0
PJD1_k127_6126525_6 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000002302 216.0
PJD1_k127_6126525_7 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000000000000000001909 128.0
PJD1_k127_6126525_8 - - - - 0.0000003333 59.0
PJD1_k127_6168735_0 Carbohydrate phosphorylase K00688 GO:0000272,GO:0003674,GO:0003824,GO:0004645,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0008144,GO:0008150,GO:0008152,GO:0008184,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0015980,GO:0016052,GO:0016740,GO:0016757,GO:0016758,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901575 2.4.1.1 0.0 1168.0
PJD1_k127_6168735_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1042.0
PJD1_k127_6168735_2 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K14086 - - 2.271e-281 871.0
PJD1_k127_6168735_3 PFAM NADH-ubiquinone oxidoreductase, chain 49kDa K00333,K14090 - 1.6.5.3 1.475e-205 642.0
PJD1_k127_6168735_4 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008373 538.0
PJD1_k127_6168735_5 NADH dehydrogenase K14087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 469.0
PJD1_k127_6168735_6 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K14088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001346 272.0
PJD1_k127_6168735_7 Aldehyde ferredoxin oxidoreductase, N-terminal domain K11389 - 1.2.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000273 247.0
PJD1_k127_6168735_8 4Fe-4S dicluster domain K14091 - - 0.000000000000000000000000000000000000000000000004761 175.0
PJD1_k127_6168735_9 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K14089 - - 0.000000000000000000000000000000000000000000166 165.0
PJD1_k127_616976_0 SMART Elongator protein 3 MiaB NifB - - - 9.501e-273 851.0
PJD1_k127_616976_1 Flavin containing amine oxidoreductase K01854 - 5.4.99.9 1.961e-243 756.0
PJD1_k127_616976_10 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000006645 233.0
PJD1_k127_616976_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000002223 220.0
PJD1_k127_616976_12 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000001647 225.0
PJD1_k127_616976_13 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000339 151.0
PJD1_k127_616976_14 Methyltransferase domain - - - 0.00000000000000000000000000000002401 130.0
PJD1_k127_616976_15 - - - - 0.0000000000000000001261 89.0
PJD1_k127_616976_17 methyltransferase K03183,K21600 - 2.1.1.163,2.1.1.201 0.00000005192 65.0
PJD1_k127_616976_18 Integrase catalytic region K07497 - - 0.00002177 48.0
PJD1_k127_616976_19 COG2801 Transposase and inactivated derivatives K07497 - - 0.00008419 48.0
PJD1_k127_616976_2 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 588.0
PJD1_k127_616976_20 COG2801 Transposase and inactivated derivatives K07497 - - 0.0002817 44.0
PJD1_k127_616976_3 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 567.0
PJD1_k127_616976_4 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052,K07246 - 1.1.1.83,1.1.1.85,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 567.0
PJD1_k127_616976_5 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 552.0
PJD1_k127_616976_6 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 333.0
PJD1_k127_616976_7 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 324.0
PJD1_k127_616976_8 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000001986 232.0
PJD1_k127_616976_9 structural constituent of ribosome K02996 - - 0.000000000000000000000000000000000000000000000000000000000000000008281 226.0
PJD1_k127_6273879_0 PFAM NAD NADP octopine nopaline dehydrogenase K04940 - 1.5.1.28 6.795e-203 635.0
PJD1_k127_6273879_1 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 587.0
PJD1_k127_6273879_10 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000006214 179.0
PJD1_k127_6273879_11 - - - - 0.0000000000000000000000000000006863 127.0
PJD1_k127_6273879_12 Rubrerythrin - - - 0.00000000000000000000000000005393 122.0
PJD1_k127_6273879_13 phenylacetate-CoA ligase activity - - - 0.000000000000000002169 98.0
PJD1_k127_6273879_2 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 489.0
PJD1_k127_6273879_3 Histidine kinase K07641,K07711 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031667,GO:0035556,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 448.0
PJD1_k127_6273879_4 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 404.0
PJD1_k127_6273879_5 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 301.0
PJD1_k127_6273879_6 Chloramphenicol acetyltransferase K19271 - 2.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 288.0
PJD1_k127_6273879_7 response K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001082 285.0
PJD1_k127_6273879_8 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001278 284.0
PJD1_k127_6273879_9 Cobalamin B12-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001052 271.0
PJD1_k127_6341226_0 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 606.0
PJD1_k127_6341226_1 AraC-like ligand binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000625 265.0
PJD1_k127_6373238_0 Iron-sulfur cluster-binding domain - - - 1.341e-255 793.0
PJD1_k127_6373238_1 B12 binding domain - - - 6.82e-224 702.0
PJD1_k127_6373238_10 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000003223 211.0
PJD1_k127_6373238_11 DIM6 NTAB family - - - 0.000000000000000000000000000000000000000000000000000000000205 208.0
PJD1_k127_6373238_12 [acyl-carrier-protein] S-malonyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000001814 196.0
PJD1_k127_6373238_13 Phosphopantetheine attachment site K02078 - - 0.0000000000000000000000000000000000004615 142.0
PJD1_k127_6373238_14 RESPONSE REGULATOR receiver - - - 0.00000000000000000000000000000000006716 149.0
PJD1_k127_6373238_15 LysM domain - - - 0.0000000000000000000000000007193 129.0
PJD1_k127_6373238_16 - - - - 0.0000000002572 68.0
PJD1_k127_6373238_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 486.0
PJD1_k127_6373238_3 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 447.0
PJD1_k127_6373238_4 Kdo2-lipid A biosynthetic process K02517,K20543,K22311 - 2.3.1.241,2.3.1.265 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008686 433.0
PJD1_k127_6373238_5 Domain of unknown function (DUF3473) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 363.0
PJD1_k127_6373238_6 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 308.0
PJD1_k127_6373238_7 PFAM Appr-1-p processing domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008893 289.0
PJD1_k127_6373238_8 Transcriptional regulator K13643 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001024 250.0
PJD1_k127_6373238_9 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000001335 214.0
PJD1_k127_6424721_0 Collagenase K08303 - - 0.0 1060.0
PJD1_k127_6424721_1 SMART Elongator protein 3 MiaB NifB - - - 6.313e-243 758.0
PJD1_k127_6424721_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006239 330.0
PJD1_k127_6424721_3 Lipid A 3-O-deacylase (PagL) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007632 296.0
PJD1_k127_6424721_4 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000002722 169.0
PJD1_k127_6424721_5 NUDIX domain K03574 - 3.6.1.55 0.00000000000000000000000000000000000000005346 155.0
PJD1_k127_6424721_7 Peptidoglycan-binding domain 1 protein - - - 0.000000000000002291 87.0
PJD1_k127_6424721_8 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000009294 58.0
PJD1_k127_6455218_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.0 1149.0
PJD1_k127_6455218_1 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.0 1111.0
PJD1_k127_6455218_10 Domains HAMP, HisKA, HATPase_c, REC K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 559.0
PJD1_k127_6455218_11 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006942 540.0
PJD1_k127_6455218_12 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 519.0
PJD1_k127_6455218_13 Amino acid kinase family K00947 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006639 441.0
PJD1_k127_6455218_14 Molybdate transporter of MFS superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 446.0
PJD1_k127_6455218_15 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005028 328.0
PJD1_k127_6455218_16 GGDEF domain K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 323.0
PJD1_k127_6455218_17 Helix-turn-helix transcriptional regulator PuuR, cupin domain-containing - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004746 311.0
PJD1_k127_6455218_18 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 313.0
PJD1_k127_6455218_19 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006089 299.0
PJD1_k127_6455218_2 SMART Elongator protein 3 MiaB NifB - - - 0.0 1101.0
PJD1_k127_6455218_20 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002928 279.0
PJD1_k127_6455218_21 Probable molybdopterin binding domain K03638,K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000005946 240.0
PJD1_k127_6455218_22 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000000000000000000000005354 229.0
PJD1_k127_6455218_23 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000004165 228.0
PJD1_k127_6455218_24 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000005536 214.0
PJD1_k127_6455218_25 - - - - 0.00000000000000000000000000000000000000000000000000000000009256 216.0
PJD1_k127_6455218_26 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000000000009473 186.0
PJD1_k127_6455218_27 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000000000000000000004596 179.0
PJD1_k127_6455218_28 Cyclophilin-like K09143 - - 0.0000000000000000000000000000000000000000000000005459 179.0
PJD1_k127_6455218_29 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000002082 162.0
PJD1_k127_6455218_3 DNA polymerase type-B family K02336 - 2.7.7.7 2.58e-319 994.0
PJD1_k127_6455218_30 PFAM metal-dependent phosphohydrolase HD sub - - - 0.0000000000000000000000000000000000000000007143 162.0
PJD1_k127_6455218_31 - - - - 0.0000000000000000000000000009943 113.0
PJD1_k127_6455218_32 - - - - 0.0000000000000001322 80.0
PJD1_k127_6455218_4 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 1.66e-287 887.0
PJD1_k127_6455218_5 Saccharopine dehydrogenase C-terminal domain K00290 - 1.5.1.7 9.838e-238 739.0
PJD1_k127_6455218_6 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 2.289e-237 743.0
PJD1_k127_6455218_7 Belongs to the Orn Lys Arg decarboxylase class-II family. NspC subfamily K13747 - 4.1.1.96 2.177e-229 712.0
PJD1_k127_6455218_8 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 7.72e-211 661.0
PJD1_k127_6455218_9 TonB dependent receptor K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000484 558.0
PJD1_k127_6479489_0 PFAM NADH Ubiquinone plastoquinone (complex I) K05568,K12137 - - 6.234e-262 818.0
PJD1_k127_6479489_1 PFAM NADH Ubiquinone plastoquinone (complex I) K05568 - - 3.807e-212 668.0
PJD1_k127_6479489_10 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000000000000000000000002318 153.0
PJD1_k127_6479489_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.0000000000000000000000000000001963 129.0
PJD1_k127_6479489_12 PFAM Cold-shock protein, DNA-binding K03704 - - 0.0000000000000000000000000000006155 123.0
PJD1_k127_6479489_13 TIGRFAM RecB family nuclease - - - 0.000000000000000000000000000001222 125.0
PJD1_k127_6479489_14 - - - - 0.000000000000000001864 97.0
PJD1_k127_6479489_15 - - - - 0.000000002796 65.0
PJD1_k127_6479489_2 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 4.319e-208 657.0
PJD1_k127_6479489_3 Biotin-lipoyl like K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 483.0
PJD1_k127_6479489_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 475.0
PJD1_k127_6479489_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 430.0
PJD1_k127_6479489_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 414.0
PJD1_k127_6479489_7 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 300.0
PJD1_k127_6479489_8 HPP family K07168 - - 0.000000000000000000000000000000000000000000000000000000000000000000000436 241.0
PJD1_k127_6479489_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.0000000000000000000000000000000000000003297 158.0
PJD1_k127_6499927_0 FAD dependent oxidoreductase K07137 - - 6.224e-199 632.0
PJD1_k127_6499927_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 595.0
PJD1_k127_6499927_10 beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001203 259.0
PJD1_k127_6499927_11 Universal stress protein K06149 - - 0.00000000000000000000000000000000000000000000000000000000000000000294 228.0
PJD1_k127_6499927_12 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000000000001168 209.0
PJD1_k127_6499927_13 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000000000000000000000002241 188.0
PJD1_k127_6499927_14 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000001551 183.0
PJD1_k127_6499927_15 response regulator - - - 0.0000000000000000000000000000000000000000000000005877 179.0
PJD1_k127_6499927_16 Domain of unknown function (DUF4115) K15539 - - 0.000000000000000000000000000000000000000000009743 173.0
PJD1_k127_6499927_17 YtxH-like protein - - - 0.0000000000000000000000000000000004247 134.0
PJD1_k127_6499927_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 575.0
PJD1_k127_6499927_3 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 513.0
PJD1_k127_6499927_4 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 448.0
PJD1_k127_6499927_5 Zinc dependent phospholipase C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 423.0
PJD1_k127_6499927_6 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008173 326.0
PJD1_k127_6499927_7 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 320.0
PJD1_k127_6499927_8 regulatory protein LysR K02019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 313.0
PJD1_k127_6499927_9 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008032 285.0
PJD1_k127_6506016_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00520 - 1.16.1.1 8.929e-198 626.0
PJD1_k127_6506016_1 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006613 539.0
PJD1_k127_6506016_10 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 0.0000000000000004776 77.0
PJD1_k127_6506016_11 - - - - 0.000006735 53.0
PJD1_k127_6506016_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000492 499.0
PJD1_k127_6506016_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 480.0
PJD1_k127_6506016_4 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 420.0
PJD1_k127_6506016_5 helix_turn_helix, cAMP Regulatory protein K01420,K21563 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005824 336.0
PJD1_k127_6506016_6 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002452 276.0
PJD1_k127_6506016_7 PBS lyase HEAT-like repeat - - - 0.000000000000000000000000000000000000000000000000000000000000001306 224.0
PJD1_k127_6506016_8 Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000009757 162.0
PJD1_k127_6506016_9 Cupin domain - - - 0.000000000000000000001467 97.0
PJD1_k127_65186_0 peptidoglycan-binding domain-containing protein K17733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006447 480.0
PJD1_k127_65186_1 Protein of unknown function (DUF2589) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004655 336.0
PJD1_k127_65186_10 - - - - 0.0000228 55.0
PJD1_k127_65186_12 Ring finger protein 141 - GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004842,GO:0005488,GO:0006355,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016567,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0031323,GO:0031326,GO:0032446,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051865,GO:0060255,GO:0065007,GO:0070647,GO:0071704,GO:0080090,GO:0097159,GO:0140096,GO:1901363,GO:1901564,GO:1903506,GO:2000112,GO:2001141 - 0.000786 45.0
PJD1_k127_65186_13 Tetratricopeptide repeat - - - 0.0009634 51.0
PJD1_k127_65186_2 DinB superfamily K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 298.0
PJD1_k127_65186_3 Protein of unknown function (DUF2589) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007787 266.0
PJD1_k127_65186_4 - - - - 0.000000000000000000000000000000000000000001746 156.0
PJD1_k127_65186_5 COG3209 Rhs family protein K01449 - 3.5.1.28 0.0000000000000000000000000000001312 134.0
PJD1_k127_65186_7 Sigma-70, region 4 K03088 - - 0.000000000000000000001041 109.0
PJD1_k127_65186_8 Type VI secretion system effector, Hcp K11903 - - 0.000000000001752 68.0
PJD1_k127_6522046_0 TIGRFAM DNA internalization-related competence protein ComEC Rec2 K02238 - - 3.218e-242 772.0
PJD1_k127_6522046_1 Helix-hairpin-helix DNA-binding motif class 1 - - - 4.302e-208 655.0
PJD1_k127_6522046_10 PFAM Rieske 2Fe-2S K02636 - 1.10.9.1 0.000000000000000000000000000000000000000000000000003472 186.0
PJD1_k127_6522046_11 - - - - 0.000000000000000000000000000000000008047 144.0
PJD1_k127_6522046_12 - - - - 0.000000000000000000000000007697 114.0
PJD1_k127_6522046_13 Domain of unknown function (DUF4844) - - - 0.000000000000000000000003137 111.0
PJD1_k127_6522046_14 - - - - 0.00000000000000000007688 93.0
PJD1_k127_6522046_16 - - - - 0.00000000000468 70.0
PJD1_k127_6522046_17 Transposase, IS605 OrfB family - - - 0.00000000006658 69.0
PJD1_k127_6522046_18 - - - - 0.000001952 55.0
PJD1_k127_6522046_19 RNA pseudouridylate synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.00002848 47.0
PJD1_k127_6522046_2 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 6.031e-204 641.0
PJD1_k127_6522046_20 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0005617 48.0
PJD1_k127_6522046_3 RmuC family K09760 - - 2.169e-199 633.0
PJD1_k127_6522046_4 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 576.0
PJD1_k127_6522046_5 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000435 533.0
PJD1_k127_6522046_6 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity K14540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 405.0
PJD1_k127_6522046_7 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000785 353.0
PJD1_k127_6522046_8 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 290.0
PJD1_k127_6522046_9 Domain of unknown function (DUF4130 - - - 0.0000000000000000000000000000000000000000000000000000009137 196.0
PJD1_k127_6536819_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 592.0
PJD1_k127_6536819_1 Metal-dependent phosphohydrolase K07037 - - 0.00000000000000000000000000000000000000000000000000196 195.0
PJD1_k127_6537983_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 359.0
PJD1_k127_6537983_1 Phage capsid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000007715 241.0
PJD1_k127_6537983_2 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000000000000000000002573 156.0
PJD1_k127_6537983_3 PFAM glycosyl transferase family 9 - - - 0.000000000000000000000000000000002147 131.0
PJD1_k127_6546975_0 Pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001824 254.0
PJD1_k127_6546975_1 PFAM Fimbrial assembly family protein K02663 - - 0.00000000000000000000000000000000000002748 150.0
PJD1_k127_6546975_2 - - - - 0.000000000000000000000000000000000005442 144.0
PJD1_k127_6546975_3 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000000000001472 126.0
PJD1_k127_6568119_0 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 330.0
PJD1_k127_6568119_1 Phage integrase, N-terminal SAM-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000481 220.0
PJD1_k127_6586558_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K11389 - 1.2.7.6 1.3e-239 744.0
PJD1_k127_6586558_1 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 2.177e-221 694.0
PJD1_k127_6586558_2 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000005046 142.0
PJD1_k127_6586558_3 Sodium/hydrogen exchanger family - - - 0.000000000000000008577 87.0
PJD1_k127_6586558_4 - - - - 0.000000001596 60.0
PJD1_k127_6587945_0 Transglutaminase-like - - - 1.242e-276 917.0
PJD1_k127_6587945_1 mannose-ethanolamine phosphotransferase activity - - - 0.00000000000001 90.0
PJD1_k127_6593548_0 TPR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 612.0
PJD1_k127_6593548_1 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002456 248.0
PJD1_k127_6593548_2 - - - - 0.0000000134 59.0
PJD1_k127_6593548_3 - - - - 0.000007822 48.0
PJD1_k127_6614215_0 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007301 248.0
PJD1_k127_6614215_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000001846 216.0
PJD1_k127_6614215_2 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000000000000000000000000000001114 162.0
PJD1_k127_6614215_3 Tellurite resistance protein TehB - - - 0.0000000000000000000001015 100.0
PJD1_k127_6615923_0 Pirin K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 357.0
PJD1_k127_6615923_1 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 332.0
PJD1_k127_6615923_2 helix_turn_helix multiple antibiotic resistance protein K15973 - - 0.000000000000000000000000000000000000000000000000000000000000003681 220.0
PJD1_k127_6615923_3 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000001177 211.0
PJD1_k127_6615923_4 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000000000000001538 149.0
PJD1_k127_6632012_0 D-galactarate dehydratase Altronate hydrolase K16850 - 4.2.1.7 0.00000000000000000000000000000000000000000000000000000000000002391 236.0
PJD1_k127_6632012_1 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000000000000000002893 145.0
PJD1_k127_6632012_2 antisigma factor binding K04749,K04757 - 2.7.11.1 0.0000000000000000000000000000000001525 147.0
PJD1_k127_6632012_3 - - - - 0.00000000000005093 75.0
PJD1_k127_6632012_4 Transposase IS200 like - - - 0.000001324 58.0
PJD1_k127_663494_0 Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 584.0
PJD1_k127_663494_1 MOFRL family K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 416.0
PJD1_k127_663494_10 - - - - 0.0000000000000000000000000007335 119.0
PJD1_k127_663494_11 - - - - 0.000000000000000000000004101 106.0
PJD1_k127_663494_12 - - - - 0.0000000000000000000005473 96.0
PJD1_k127_663494_2 Sugar fermentation stimulation protein K06206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 329.0
PJD1_k127_663494_3 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008229 315.0
PJD1_k127_663494_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006037 244.0
PJD1_k127_663494_5 protein histidine kinase activity K02491,K13533,K14986 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000717 256.0
PJD1_k127_663494_6 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.00000000000000000000000000000000000000000000000000002349 192.0
PJD1_k127_663494_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000001141 176.0
PJD1_k127_663494_8 TonB-dependent Receptor Plug K02014 - - 0.0000000000000000000000000000000000000000000002363 173.0
PJD1_k127_663494_9 histidine triad (HIT) protein - - - 0.000000000000000000000000000000007095 132.0
PJD1_k127_6656054_0 PFAM Carbamoyl-phosphate synthase L chain ATP-binding K01955 - 6.3.5.5 0.0 1885.0
PJD1_k127_6656054_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 6.934e-214 670.0
PJD1_k127_6656054_10 PFAM Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007572 272.0
PJD1_k127_6656054_11 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000898 271.0
PJD1_k127_6656054_12 CHASE4 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002759 294.0
PJD1_k127_6656054_13 Putative member of DMT superfamily (DUF486) K09922 - - 0.000000000000000000000000000000000000000000000000000000001093 201.0
PJD1_k127_6656054_14 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000000005461 186.0
PJD1_k127_6656054_15 PIN domain - - - 0.0000000000000000000000000000000000000000000000000009633 188.0
PJD1_k127_6656054_17 Chorismate mutase K00014,K00891,K04092,K04516 - 1.1.1.25,2.7.1.71,5.4.99.5 0.0001859 46.0
PJD1_k127_6656054_2 TIGRFAM carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 9.897e-209 653.0
PJD1_k127_6656054_3 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 1.185e-205 648.0
PJD1_k127_6656054_4 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 515.0
PJD1_k127_6656054_5 radical SAM domain protein K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 494.0
PJD1_k127_6656054_6 Domain of unknown function (DUF4143) K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 497.0
PJD1_k127_6656054_7 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 467.0
PJD1_k127_6656054_8 Bifunctional protein PyrR K02825 GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 293.0
PJD1_k127_6656054_9 PFAM Silent information regulator protein Sir2 K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003723 294.0
PJD1_k127_6706854_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 1.899e-260 812.0
PJD1_k127_6706854_1 Bacterial regulatory protein, Fis family - - - 1.638e-194 631.0
PJD1_k127_6706854_10 - - - - 0.00000000003843 63.0
PJD1_k127_6706854_11 radical SAM K06871 - - 0.0001063 47.0
PJD1_k127_6706854_2 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 518.0
PJD1_k127_6706854_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 295.0
PJD1_k127_6706854_4 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT K18139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001135 254.0
PJD1_k127_6706854_5 - - - - 0.000000000000000000000000000000006963 133.0
PJD1_k127_6706854_6 Sporulation related domain - - - 0.00000000000000000000000000000048 132.0
PJD1_k127_6706854_7 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.0000000000000000000000000005342 116.0
PJD1_k127_6706854_8 - - - - 0.0000000000000000004295 93.0
PJD1_k127_6706854_9 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589,K13052 - - 0.00000000001135 64.0
PJD1_k127_6707217_0 Tetratricopeptide TPR_2 repeat protein - - - 5.968e-194 620.0
PJD1_k127_6707217_1 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 578.0
PJD1_k127_6707217_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009789 400.0
PJD1_k127_6714237_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1276.0
PJD1_k127_6714237_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.0 1237.0
PJD1_k127_6714237_2 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0 1222.0
PJD1_k127_6714237_3 Proposed homoserine kinase K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 607.0
PJD1_k127_6714237_4 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 522.0
PJD1_k127_6714237_5 Type II secretion system (T2SS), protein F K02455,K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 449.0
PJD1_k127_6714237_6 integrase domain protein SAM domain protein K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006934 404.0
PJD1_k127_6714237_7 Pilus assembly protein K02662 - - 0.0000004049 57.0
PJD1_k127_6729079_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1197.0
PJD1_k127_6729079_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 3.221e-206 649.0
PJD1_k127_6729079_2 Response regulator receiver modulated diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 1.672e-195 632.0
PJD1_k127_6729079_3 PFAM peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 544.0
PJD1_k127_6729079_4 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 448.0
PJD1_k127_6729079_5 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 362.0
PJD1_k127_6729079_6 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 283.0
PJD1_k127_6729079_7 PFAM Maf family protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003583 267.0
PJD1_k127_6729079_8 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000000000000000004969 153.0
PJD1_k127_6729079_9 Peptidase S24-like - - - 0.0000000000000000000000000000000004627 139.0
PJD1_k127_6739688_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 1.53e-239 750.0
PJD1_k127_6739688_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 576.0
PJD1_k127_6739688_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007142 366.0
PJD1_k127_6739688_3 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03072,K03074,K12257 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000247 132.0
PJD1_k127_6739688_4 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.000000000000000000000000000003299 121.0
PJD1_k127_6763419_0 CHAT domain - - - 1.794e-220 743.0
PJD1_k127_6763419_1 PFAM cobalamin (vitamin B12) biosynthesis CbiM protein K02007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005826 443.0
PJD1_k127_6763419_2 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008719 279.0
PJD1_k127_6763419_4 PFAM Tetratricopeptide repeat - - - 0.000000000000000008965 100.0
PJD1_k127_6796333_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 418.0
PJD1_k127_6796333_1 PFAM GCN5-related N-acetyltransferase K03824 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007141 295.0
PJD1_k127_6796333_2 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000000000000006911 121.0
PJD1_k127_6808041_0 POTRA domain TamA domain 1 K07277,K07278 - - 4.466e-195 626.0
PJD1_k127_6808041_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007187 279.0
PJD1_k127_6808041_2 nuclease activity K06218 - - 0.0000000000000000000000000001754 116.0
PJD1_k127_6808041_3 Pfam:DUF490 K09800 - - 0.00000000000000000000001266 110.0
PJD1_k127_6810708_0 FlhB HrpN YscU SpaS Family K04061 - - 0.0000000000000000000000000000002149 125.0
PJD1_k127_6810708_1 - - - - 0.00000000000000000000000000003103 119.0
PJD1_k127_6810708_2 Penicillin-insensitive murein endopeptidase K07261 - - 0.000000000000000000000000000115 118.0
PJD1_k127_6810708_3 Flagellar hook-length control protein FliK - - - 0.00000000000000001681 93.0
PJD1_k127_6810708_4 Cysteine-rich CPCC - - - 0.00000000000000007389 84.0
PJD1_k127_6810708_5 Penicillin-insensitive murein endopeptidase K07261 - - 0.000000000003587 68.0
PJD1_k127_6810708_6 - - - - 0.0001721 52.0
PJD1_k127_6819259_0 PFAM extracellular solute-binding protein, family 5 K02035,K13893 - - 4.643e-276 856.0
PJD1_k127_6819259_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 1.499e-265 828.0
PJD1_k127_6819259_10 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 483.0
PJD1_k127_6819259_11 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004339 469.0
PJD1_k127_6819259_12 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 463.0
PJD1_k127_6819259_13 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 430.0
PJD1_k127_6819259_14 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 417.0
PJD1_k127_6819259_15 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 426.0
PJD1_k127_6819259_16 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008912 398.0
PJD1_k127_6819259_17 Protein of unknown function (DUF815) K06923 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 379.0
PJD1_k127_6819259_18 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 359.0
PJD1_k127_6819259_19 PFAM ABC transporter related K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 350.0
PJD1_k127_6819259_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 8.112e-227 710.0
PJD1_k127_6819259_20 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007254 361.0
PJD1_k127_6819259_21 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 287.0
PJD1_k127_6819259_22 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007168 269.0
PJD1_k127_6819259_23 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000004577 239.0
PJD1_k127_6819259_24 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000002859 221.0
PJD1_k127_6819259_25 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000005511 191.0
PJD1_k127_6819259_26 - - - - 0.000000000000000000000000000000000000000000000000004973 185.0
PJD1_k127_6819259_27 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.000000000000000000000000000000000000000000000001193 180.0
PJD1_k127_6819259_28 PTS system fructose IIA component K02793 - 2.7.1.191 0.000000000000000000000000000000000000000000000003146 175.0
PJD1_k127_6819259_29 PFAM Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000009012 155.0
PJD1_k127_6819259_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 1.183e-219 685.0
PJD1_k127_6819259_30 Lipopolysaccharide-assembly, LptC-related - - - 0.000000000000000000000000000000000000003408 152.0
PJD1_k127_6819259_31 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000000000000000004429 145.0
PJD1_k127_6819259_32 GIY-YIG catalytic domain K07461 - - 0.000000000000000000000000000000000002243 140.0
PJD1_k127_6819259_33 Phosphocarrier protein Chr K11184 - - 0.000000000000001155 79.0
PJD1_k127_6819259_4 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 5.024e-219 687.0
PJD1_k127_6819259_5 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 1.985e-195 623.0
PJD1_k127_6819259_6 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 611.0
PJD1_k127_6819259_7 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 539.0
PJD1_k127_6819259_8 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005064 533.0
PJD1_k127_6819259_9 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 512.0
PJD1_k127_6823061_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1369.0
PJD1_k127_6823061_1 histidine kinase A domain protein domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 604.0
PJD1_k127_6823061_10 antisigma factor binding K04749,K04757 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000002098 243.0
PJD1_k127_6823061_11 PFAM ATP-binding region - - - 0.000000000000000000000000000000000000000000000000000000001579 231.0
PJD1_k127_6823061_12 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.00000000000000000000000000000000000000000000000000004744 187.0
PJD1_k127_6823061_13 metal-dependent phosphohydrolase HD - - - 0.0000000000000000000000000002482 132.0
PJD1_k127_6823061_14 Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co- degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation K02485,K07315 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0009893,GO:0010556,GO:0010604,GO:0016989,GO:0019219,GO:0019222,GO:0030162,GO:0031323,GO:0031325,GO:0031326,GO:0031647,GO:0031648,GO:0032268,GO:0032270,GO:0045862,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0140110,GO:1903506,GO:2001141 3.1.3.3 0.0000000000000000000000000002657 119.0
PJD1_k127_6823061_2 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006914 550.0
PJD1_k127_6823061_3 ABC transporter substrate binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 518.0
PJD1_k127_6823061_4 ATP-binding region, ATPase domain protein domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 475.0
PJD1_k127_6823061_5 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 430.0
PJD1_k127_6823061_6 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 399.0
PJD1_k127_6823061_7 ATPases associated with a variety of cellular activities K05833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008473 359.0
PJD1_k127_6823061_8 Belongs to the binding-protein-dependent transport system permease family K05832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 341.0
PJD1_k127_6823061_9 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004617 279.0
PJD1_k127_6881889_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 1.345e-295 925.0
PJD1_k127_6881889_1 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 316.0
PJD1_k127_6881889_10 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000001288 126.0
PJD1_k127_6881889_12 - - - - 0.00000000000000000000005407 104.0
PJD1_k127_6881889_14 PFAM Transposase, IS204 IS1001 IS1096 IS1165 K07485 - - 0.00004279 51.0
PJD1_k127_6881889_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001985 278.0
PJD1_k127_6881889_3 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001691 267.0
PJD1_k127_6881889_4 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000002512 242.0
PJD1_k127_6881889_5 Dihydrofolate reductase K00287,K18589 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000000007712 198.0
PJD1_k127_6881889_7 - - - - 0.000000000000000000000000000000000000000000000004114 181.0
PJD1_k127_6881889_8 PFAM Class I peptide chain release factor - - - 0.0000000000000000000000000000000000000000001657 161.0
PJD1_k127_6881889_9 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000000000000000000000000000001455 161.0
PJD1_k127_6890717_0 PFAM Lytic transglycosylase catalytic K08309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007075 569.0
PJD1_k127_6890717_1 PFAM Integrase, catalytic core - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 529.0
PJD1_k127_6896493_0 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 501.0
PJD1_k127_6896493_1 PFAM Bile acid sodium symporter K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 502.0
PJD1_k127_6896493_10 PFAM regulatory protein, ArsR - - - 0.00000000000000000000000000000000004828 136.0
PJD1_k127_6896493_11 PFAM regulatory protein, ArsR K03892 - - 0.0000000000000000000000000000001005 128.0
PJD1_k127_6896493_13 TIGRFAM redox-active disulfide protein 2 - - - 0.000000000000000000000000004087 111.0
PJD1_k127_6896493_2 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 446.0
PJD1_k127_6896493_3 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 341.0
PJD1_k127_6896493_4 ubiE/COQ5 methyltransferase family K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 333.0
PJD1_k127_6896493_5 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000007203 262.0
PJD1_k127_6896493_6 4fe-4S ferredoxin, iron-sulfur binding domain protein K00176 - 1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000006232 211.0
PJD1_k127_6896493_7 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000001091 197.0
PJD1_k127_6896493_8 PFAM Thioredoxin K03671 - - 0.000000000000000000000000000000000000001634 151.0
PJD1_k127_6896493_9 4 iron, 4 sulfur cluster binding K00176 - 1.2.7.3 0.00000000000000000000000000000000001655 136.0
PJD1_k127_6991894_0 Pfam:UPF0118 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006355 414.0
PJD1_k127_6991894_1 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000002715 79.0
PJD1_k127_6991894_2 - - - - 0.000001617 57.0
PJD1_k127_7068206_0 - K08223 - - 0.00000000000000000000000000000000008159 148.0
PJD1_k127_7068206_1 amidohydrolase - - - 0.00000000003049 67.0
PJD1_k127_7101808_0 PFAM ABC transporter related - - - 5.663e-297 916.0
PJD1_k127_7101808_1 General secretory system II, protein E domain protein K02652 - - 2.845e-286 887.0
PJD1_k127_7101808_10 - - - - 0.0000000000000000000000000000000000000000000172 169.0
PJD1_k127_7101808_11 ACT domain K07166 - - 0.000000000000000000000000000000000000000001507 157.0
PJD1_k127_7101808_13 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000001667 65.0
PJD1_k127_7101808_2 UPF0210 protein K09157 - - 4.883e-260 805.0
PJD1_k127_7101808_3 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008121 548.0
PJD1_k127_7101808_5 Uncharacterized BCR, YaiI/YqxD family COG1671 K09768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001053 257.0
PJD1_k127_7101808_6 Type II secretory pathway, pseudopilin - - - 0.000000000000000000000000000000000000000000000000000000001648 205.0
PJD1_k127_7101808_7 COG3209 Rhs family protein - - - 0.000000000000000000000000000000000000000000000000000001119 199.0
PJD1_k127_7101808_8 Protein of unknown function (DUF4239) - - - 0.000000000000000000000000000000000000000000000000005005 190.0
PJD1_k127_7101808_9 CHASE2 K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000003188 191.0
PJD1_k127_7268006_0 Polysaccharide biosynthesis protein K17716 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 430.0
PJD1_k127_7268006_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000003744 223.0
PJD1_k127_7268006_2 Asparagine synthase K01953 - 6.3.5.4 0.00000000008417 63.0
PJD1_k127_7311001_0 PFAM TM1410 hypothetical-related protein K21006 - - 3.763e-320 1004.0
PJD1_k127_7311001_1 PFAM aminotransferase, class I and II K11358 - 2.6.1.1 1.721e-200 631.0
PJD1_k127_7311001_10 TIGRFAM Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008912 268.0
PJD1_k127_7311001_11 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000000000000000000009622 254.0
PJD1_k127_7311001_12 chaperone-mediated protein folding K21010 - - 0.000000000000000000000000000000000000000000000000000000000000000000003185 246.0
PJD1_k127_7311001_13 cAMP biosynthetic process K21008 - - 0.00000000000000000000000000000000000000000000000001977 184.0
PJD1_k127_7311001_14 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000009448 140.0
PJD1_k127_7311001_15 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.00000000000000000000000000001014 119.0
PJD1_k127_7311001_2 Domain of unknown function (DUF3492) K21011 - - 1.885e-200 635.0
PJD1_k127_7311001_3 Putative exopolysaccharide Exporter (EPS-E) K21012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 607.0
PJD1_k127_7311001_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 580.0
PJD1_k127_7311001_5 Tetratricopeptide repeat K21007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009673 610.0
PJD1_k127_7311001_6 regulation of RNA biosynthetic process - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 436.0
PJD1_k127_7311001_7 PelD GGDEF domain K21009 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 430.0
PJD1_k127_7311001_8 PFAM Chromosomal replication initiator, DnaA K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005869 325.0
PJD1_k127_7311001_9 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001406 279.0
PJD1_k127_7313104_0 Glutamate synthase central domain K00265 - 1.4.1.13,1.4.1.14 0.0 2123.0
PJD1_k127_7313104_1 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 377.0
PJD1_k127_7313104_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 365.0
PJD1_k127_7313104_3 4-vinyl reductase, 4VR K07013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005229 269.0
PJD1_k127_7313104_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000004722 51.0
PJD1_k127_7369350_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 2.438e-208 654.0
PJD1_k127_7369350_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 307.0
PJD1_k127_7369350_3 Autotransporter beta-domain - - - 0.0000000000000000000000002577 109.0
PJD1_k127_7369350_5 N-terminal domain of unknown function (DUF4140) - - - 0.0000000000000006051 79.0
PJD1_k127_7369350_6 Outer membrane lipoprotein-sorting protein - - - 0.00001225 51.0
PJD1_k127_7373629_0 PFAM aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K07469 - 1.2.99.7 0.0 1364.0
PJD1_k127_7373629_1 PFAM molybdopterin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981 486.0
PJD1_k127_7373629_10 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000012 110.0
PJD1_k127_7373629_12 TonB system transport protein ExbD K03559 - - 0.000000000000000002744 89.0
PJD1_k127_7373629_13 Transcriptional regulator, ModE family K02019 - - 0.0000000000000001723 84.0
PJD1_k127_7373629_14 amino acid K03294,K13868 - - 0.0000000000000003729 85.0
PJD1_k127_7373629_2 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 506.0
PJD1_k127_7373629_3 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002201 241.0
PJD1_k127_7373629_4 cytochrome c biogenesis protein - - - 0.000000000000000000000000000000000000000000000000000000000006399 216.0
PJD1_k127_7373629_5 MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000005923 207.0
PJD1_k127_7373629_7 sulfur relay protein, TusE DsrC DsvC family K11179 - - 0.00000000000000000000000000000000000000002327 154.0
PJD1_k127_7373629_8 tRNA wobble cytosine modification - - - 0.000000000000000000000000000000000000002137 149.0
PJD1_k127_7373629_9 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis protein - - - 0.000000000000000000000000000000000005078 143.0
PJD1_k127_74015_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1582.0
PJD1_k127_74015_1 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 2.411e-210 662.0
PJD1_k127_74015_10 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000003438 264.0
PJD1_k127_74015_11 PFAM amino acid-binding ACT domain protein K03567 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002745 260.0
PJD1_k127_74015_12 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002942 252.0
PJD1_k127_74015_13 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000004987 174.0
PJD1_k127_74015_14 Fibronectin type 3 domain - - - 0.0000000000000000000000006484 123.0
PJD1_k127_74015_15 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.00000000000001759 73.0
PJD1_k127_74015_16 domain, Protein - - - 0.00009387 55.0
PJD1_k127_74015_2 TonB dependent receptor K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 576.0
PJD1_k127_74015_3 Domains HAMP, HisKA, HATPase_c, REC K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 541.0
PJD1_k127_74015_4 PFAM Radical SAM domain protein K06871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 454.0
PJD1_k127_74015_5 heat shock protein DnaJ domain protein K03686,K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 448.0
PJD1_k127_74015_6 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 358.0
PJD1_k127_74015_7 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769,K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 306.0
PJD1_k127_74015_8 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 305.0
PJD1_k127_74015_9 PFAM Roadblock LC7 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006885 286.0
PJD1_k127_7444989_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006526 453.0
PJD1_k127_7444989_1 Tar ligand binding domain homologue K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 462.0
PJD1_k127_7444989_11 - - - - 0.0000107 54.0
PJD1_k127_7444989_12 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.00001148 48.0
PJD1_k127_7444989_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000566 410.0
PJD1_k127_7444989_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 382.0
PJD1_k127_7444989_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 344.0
PJD1_k127_7444989_5 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008934 303.0
PJD1_k127_7444989_6 PFAM Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 303.0
PJD1_k127_7444989_8 TIGRFAM sulfur relay protein, TusE DsrC DsvC family K11179 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000002591 149.0
PJD1_k127_7444989_9 - - - - 0.0000000000000000000000000000000001939 138.0
PJD1_k127_7457530_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 2.393e-319 983.0
PJD1_k127_7457530_1 thiamine pyrophosphate protein TPP binding domain protein K01652 - 2.2.1.6 9.371e-311 960.0
PJD1_k127_7457530_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 1.4e-201 629.0
PJD1_k127_7457530_3 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006096 573.0
PJD1_k127_7457530_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 422.0
PJD1_k127_7457530_5 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 289.0
PJD1_k127_7457530_6 TIGRFAM acetolactate synthase, small subunit K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001073 279.0
PJD1_k127_7457530_7 Glycoprotease family K01409,K14742 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000001086 226.0
PJD1_k127_7540104_0 Belongs to the amidase family K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 598.0
PJD1_k127_7540104_1 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.00000000000000000000000000000000000000000000000000000009287 210.0
PJD1_k127_7540104_2 LUD domain K00782 - - 0.00000000000000000000000000000000000000000000000001777 183.0
PJD1_k127_7668239_0 Homeodomain-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004513 524.0
PJD1_k127_7668239_1 Belongs to the GARS family K01945 - 6.3.4.13 0.00002533 48.0
PJD1_k127_769191_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 591.0
PJD1_k127_769191_1 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 578.0
PJD1_k127_769191_2 HlyD family secretion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005974 499.0
PJD1_k127_769191_3 Probable molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 378.0
PJD1_k127_769191_4 PFAM ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 347.0
PJD1_k127_769191_5 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007463 279.0
PJD1_k127_769191_6 Glutaredoxin - - - 0.000000000000000000000000000000001024 134.0
PJD1_k127_769191_7 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000008649 132.0
PJD1_k127_769191_8 Protein of unknown function (DUF503) K09764 - - 0.00000000000000000000000002606 112.0
PJD1_k127_769191_9 - - - - 0.00000000000000000000001987 111.0
PJD1_k127_7752316_0 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0 1080.0
PJD1_k127_7752316_1 2-hydroxyglutaryl-CoA dehydratase, D-component K04113 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 593.0
PJD1_k127_7752316_10 Prokaryotic cytochrome b561 - - - 0.0000000008047 68.0
PJD1_k127_7752316_2 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 536.0
PJD1_k127_7752316_3 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 497.0
PJD1_k127_7752316_4 Putative cyclase K07130 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008319 473.0
PJD1_k127_7752316_5 BadF/BadG/BcrA/BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 381.0
PJD1_k127_7752316_6 PFAM ATPase, BadF BadG BcrA BcrD type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 313.0
PJD1_k127_7752316_7 PFAM molybdopterin dehydrogenase, FAD-binding K13479 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000001729 265.0
PJD1_k127_7752316_8 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000006378 186.0
PJD1_k127_7752316_9 - - - - 0.0000000000000000000000000000000002084 143.0
PJD1_k127_7763289_0 Pfam:KaiC K08482 - - 1.021e-279 869.0
PJD1_k127_7763289_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 484.0
PJD1_k127_7763289_10 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000004521 61.0
PJD1_k127_7763289_11 PFAM ATP-binding region ATPase domain protein - - - 0.0000001546 64.0
PJD1_k127_7763289_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 389.0
PJD1_k127_7763289_3 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000008371 222.0
PJD1_k127_7763289_4 Hep_Hag repeat-containing protein K21449 - - 0.0000000000000000000000000000000000000000000000000000000000009053 233.0
PJD1_k127_7763289_5 KaiB K08481 - - 0.0000000000000000000000000000000000000000000000009688 179.0
PJD1_k127_7763289_6 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000002939 179.0
PJD1_k127_7763289_7 PFAM ATP-binding region - - - 0.0000000000000000000000000000000000000000002597 180.0
PJD1_k127_7763289_8 KaiB K08481 - - 0.000000000000000000000000000000000000000005354 157.0
PJD1_k127_7763289_9 Diguanylate cyclase K13243 - 3.1.4.52 0.000000000000000000633 96.0
PJD1_k127_780270_0 - - - - 5.003e-269 846.0
PJD1_k127_780270_1 Heparinase II/III N-terminus - - - 6.165e-205 652.0
PJD1_k127_780270_2 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000068 609.0
PJD1_k127_780270_3 UDP binding domain K02472,K02474,K13015 - 1.1.1.136,1.1.1.336 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007071 518.0
PJD1_k127_780270_4 Alanine dehydrogenase/PNT, N-terminal domain K00298 - 1.5.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 409.0
PJD1_k127_780270_5 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000002443 167.0
PJD1_k127_780270_6 23S rRNA-intervening sequence protein - - - 0.000000000000000000000001886 106.0
PJD1_k127_7885112_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1354.0
PJD1_k127_7885112_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 1.13e-317 983.0
PJD1_k127_7885112_10 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000001423 205.0
PJD1_k127_7885112_11 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000000000000006267 166.0
PJD1_k127_7885112_12 Protein of unknown function (DUF507) - - - 0.00000000000000000000000000000000000008726 144.0
PJD1_k127_7885112_13 - - - - 0.0000000000000000000000005137 107.0
PJD1_k127_7885112_14 Protein of unknown function (DUF507) - - - 0.00000000000000096 80.0
PJD1_k127_7885112_15 - - - - 0.00000000000007684 73.0
PJD1_k127_7885112_16 Protein conserved in bacteria - - - 0.00000001594 59.0
PJD1_k127_7885112_17 Glycosyltransferase family 87 - - - 0.0005807 52.0
PJD1_k127_7885112_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 2.631e-301 932.0
PJD1_k127_7885112_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 1.411e-206 651.0
PJD1_k127_7885112_4 Chain length determinant protein - - - 2.208e-205 651.0
PJD1_k127_7885112_5 NeuB family K03856,K04516 - 2.5.1.54,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 568.0
PJD1_k127_7885112_6 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 337.0
PJD1_k127_7885112_7 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000006944 226.0
PJD1_k127_7885112_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000428 219.0
PJD1_k127_7885112_9 Hsp20/alpha crystallin family K13993 - - 0.000000000000000000000000000000000000000000000000000000000004345 211.0
PJD1_k127_795260_0 Squalene-hopene cyclase C-terminal domain K01852,K06045 - 4.2.1.129,5.4.99.17,5.4.99.7 0.0 1177.0
PJD1_k127_795260_1 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 0.0 1114.0
PJD1_k127_795260_10 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 542.0
PJD1_k127_795260_11 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008347 547.0
PJD1_k127_795260_12 Glycosyl transferase family group 2 K00720 - 2.4.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 520.0
PJD1_k127_795260_13 NmrA-like family K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 514.0
PJD1_k127_795260_14 PFAM ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005614 509.0
PJD1_k127_795260_15 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 510.0
PJD1_k127_795260_16 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007627 458.0
PJD1_k127_795260_17 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 454.0
PJD1_k127_795260_18 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 397.0
PJD1_k127_795260_19 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 372.0
PJD1_k127_795260_2 MMPL family K07003 - - 0.0 1091.0
PJD1_k127_795260_20 AAA domain, putative AbiEii toxin, Type IV TA system K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 362.0
PJD1_k127_795260_21 HlyD membrane-fusion protein of T1SS K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 367.0
PJD1_k127_795260_22 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005671 359.0
PJD1_k127_795260_23 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 334.0
PJD1_k127_795260_24 protein histidine kinase activity K01768,K13924 - 2.1.1.80,3.1.1.61,4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000597 336.0
PJD1_k127_795260_25 TonB dependent receptor K02014,K16089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 336.0
PJD1_k127_795260_26 Nitrogen fixation transcript antitermination response regulator, ANTAR domain-containing K22010 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004404 296.0
PJD1_k127_795260_27 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000001341 254.0
PJD1_k127_795260_28 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000182 247.0
PJD1_k127_795260_29 MlaC protein K07323 - - 0.00000000000000000000000000000000000000000000000000000000000000000006617 236.0
PJD1_k127_795260_3 Molecular chaperone. Has ATPase activity K04079 - - 1e-323 1000.0
PJD1_k127_795260_30 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000003253 233.0
PJD1_k127_795260_31 PFAM Mammalian cell entry related domain protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000001481 216.0
PJD1_k127_795260_32 hmm pf00545 - GO:0005575,GO:0005576 - 0.00000000000000000000000000000000000000000000000008867 182.0
PJD1_k127_795260_33 - - - - 0.000000000000000000000000000000000000000000000277 177.0
PJD1_k127_795260_34 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000000000000007147 160.0
PJD1_k127_795260_35 CVNH domain - - - 0.00000000000000000000000000004357 121.0
PJD1_k127_795260_36 phosphorelay signal transduction system K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000000000000000000005382 111.0
PJD1_k127_795260_39 TIGRFAM addiction module toxin, Txe YoeB family K19158 - - 0.000000002091 60.0
PJD1_k127_795260_4 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 8.42e-320 989.0
PJD1_k127_795260_40 Oxidoreductase molybdopterin binding domain - - - 0.000000003065 68.0
PJD1_k127_795260_5 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 4.587e-267 826.0
PJD1_k127_795260_6 PFAM magnesium chelatase ChlI subunit K07391 - - 4.712e-259 805.0
PJD1_k127_795260_7 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 7.297e-226 703.0
PJD1_k127_795260_8 Domain of unknown function (DUF3463) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 577.0
PJD1_k127_795260_9 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 542.0
PJD1_k127_816962_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 6.694e-210 668.0
PJD1_k127_816962_1 collagen metabolic process K08677 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 547.0
PJD1_k127_816962_10 amine dehydrogenase activity K20276 - - 0.000000000000000000000000000000000000000000006265 188.0
PJD1_k127_816962_11 GtrA-like protein - - - 0.000000000000000000000000000000000194 136.0
PJD1_k127_816962_12 Protein of unknown function (DUF2400) - - - 0.00000000000000000000000000001315 124.0
PJD1_k127_816962_13 Pfam:DUF2029 - - - 0.000000000000000000005168 107.0
PJD1_k127_816962_14 Bacterial membrane protein, YfhO - - - 0.000005711 59.0
PJD1_k127_816962_2 Dolichol monophosphate mannose synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 496.0
PJD1_k127_816962_3 NAD dependent epimerase dehydratase family K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 405.0
PJD1_k127_816962_4 Glycosyl transferase, family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 341.0
PJD1_k127_816962_5 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 325.0
PJD1_k127_816962_6 2-keto-3-deoxy-L-rhamnonate aldolase activity K02510 - 4.1.2.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 288.0
PJD1_k127_816962_7 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000005221 240.0
PJD1_k127_816962_8 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000001324 201.0
PJD1_k127_816962_9 - - - - 0.000000000000000000000000000000000000000000004236 182.0
PJD1_k127_818156_0 PFAM glycosyl transferase family 51 K05366 - 2.4.1.129,3.4.16.4 0.0 1118.0
PJD1_k127_818156_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.24e-322 999.0
PJD1_k127_818156_10 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000000002973 243.0
PJD1_k127_818156_11 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002843 229.0
PJD1_k127_818156_12 Protein of unknown function (DUF1318) - - - 0.0000000000000000000000000000000000000000000000000000000000000001148 229.0
PJD1_k127_818156_13 Peptidase S24-like - - - 0.000000000000000000000000000000000000000000000000000000000000009427 222.0
PJD1_k127_818156_14 Glycine-zipper domain - - - 0.00000000000000000000000000000000000000000000001036 177.0
PJD1_k127_818156_15 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000000000005955 150.0
PJD1_k127_818156_16 - - - - 0.000000000000000000000000000000000000006278 147.0
PJD1_k127_818156_17 Initiates the rapid degradation of small, acid-soluble proteins during spore germination - - - 0.000000000000000000000000000000004507 134.0
PJD1_k127_818156_18 TonB dependent receptor K02014 - - 0.00000000000000000000000000000002717 131.0
PJD1_k127_818156_19 Universal stress protein family - - - 0.0000000000000000000000000000001615 129.0
PJD1_k127_818156_2 PFAM nickel-dependent hydrogenase, large subunit K00436,K14126 - 1.12.1.2,1.8.98.5 5.529e-205 647.0
PJD1_k127_818156_20 - - - - 0.0000000000000000000002154 102.0
PJD1_k127_818156_21 Protein of unknown function (DUF1232) - - - 0.00000000000000000004766 93.0
PJD1_k127_818156_3 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009369 597.0
PJD1_k127_818156_4 PFAM Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K00335,K05587 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 391.0
PJD1_k127_818156_5 4fe-4S ferredoxin, iron-sulfur binding domain protein K05588 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 318.0
PJD1_k127_818156_6 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009183 284.0
PJD1_k127_818156_7 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001218 269.0
PJD1_k127_818156_8 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002701 245.0
PJD1_k127_818156_9 PFAM NADH ubiquinone oxidoreductase, 20 K18007 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000333 241.0
PJD1_k127_873984_0 FAD dependent oxidoreductase K07137 - - 7.882e-209 656.0
PJD1_k127_873984_1 FRG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 456.0
PJD1_k127_873984_2 Thioesterase superfamily K02614 - - 0.0000000000000000000000000000000000000000000000000000000000468 207.0
PJD1_k127_873984_3 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375 - - 0.000000000000000000000000000000000000000007349 160.0
PJD1_k127_873984_4 EamA-like transporter family - - - 0.000000000000000000000000000000000002103 150.0
PJD1_k127_873984_5 domain containing 3 - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0032991,GO:0051018 - 0.00008272 52.0
PJD1_k127_888962_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 1.365e-223 699.0
PJD1_k127_888962_1 TIGRFAM cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 488.0
PJD1_k127_888962_2 Metal-dependent phosphohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 400.0
PJD1_k127_888962_3 Response receiver-modulated nucleotide cyclase, GGDEF-related domain-containing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009085 389.0
PJD1_k127_888962_4 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 363.0
PJD1_k127_888962_5 transcriptional regulator, Rrf2 family - - - 0.00000000000000000000000000000000000000000000000000000000000005897 215.0
PJD1_k127_888962_6 - - - - 0.0000000000000000000000000000000000006332 141.0
PJD1_k127_888962_7 YtxH-like protein - - - 0.0000000000000000000005847 97.0
PJD1_k127_888962_8 - - - - 0.000000000009202 73.0
PJD1_k127_908681_0 CHAP domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 437.0
PJD1_k127_908681_1 PFAM aldo keto reductase K07079 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009705 436.0
PJD1_k127_908681_2 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 342.0
PJD1_k127_908681_3 Type VI secretion system effector, Hcp K11903 - - 0.0000000000000000000000000000000000000000000000000000000000000001254 225.0
PJD1_k127_908681_4 PFAM KWG Leptospira - - - 0.00000000000000000000000000000000000000000001102 179.0
PJD1_k127_908681_7 acid phosphatase activity K01186 - 3.2.1.18 0.000000000000000000000000002636 124.0
PJD1_k127_908681_8 Chitinase class I - - - 0.000000000000009702 87.0
PJD1_k127_913988_0 DNA (cytosine-5-)-methyltransferase activity K00558 - 2.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008941 601.0
PJD1_k127_913988_1 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003535 521.0
PJD1_k127_913988_11 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000007732 52.0
PJD1_k127_913988_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 454.0
PJD1_k127_913988_3 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007921 426.0
PJD1_k127_913988_4 May nick specific sequences that contain T G mispairs resulting from m5C-deamination K07458 - - 0.000000000000000000000000000000000000000000000000002135 185.0
PJD1_k127_913988_5 HicB family - - - 0.00000000000000000000000000000000000000000000001727 175.0
PJD1_k127_913988_7 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000000000000000000002889 156.0
PJD1_k127_913988_8 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000000000000000000000000002269 124.0
PJD1_k127_913988_9 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000000004765 74.0
PJD1_k127_960212_0 Superfamily I DNA and RNA helicases and helicase subunits - - - 0.0 2041.0
PJD1_k127_960212_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K04108 - 1.3.7.9 0.0 1242.0
PJD1_k127_960212_10 IMG reference gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 581.0
PJD1_k127_960212_11 RNA repair, ligase-Pnkp-associating, region of Hen1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008072 568.0
PJD1_k127_960212_12 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 545.0
PJD1_k127_960212_13 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004032 550.0
PJD1_k127_960212_14 ATPase family associated with various cellular activities (AAA) K06027 - 3.6.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008604 465.0
PJD1_k127_960212_15 metalloendopeptidase activity K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 435.0
PJD1_k127_960212_16 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008824 424.0
PJD1_k127_960212_17 UDP-glucoronosyl and UDP-glucosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 332.0
PJD1_k127_960212_18 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 338.0
PJD1_k127_960212_19 ABC transporter K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002024 275.0
PJD1_k127_960212_2 AAA domain - - - 0.0 1209.0
PJD1_k127_960212_20 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006613 263.0
PJD1_k127_960212_21 AMP-binding enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001912 276.0
PJD1_k127_960212_22 2Fe-2S -binding domain protein K03518,K13483 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000007091 238.0
PJD1_k127_960212_23 PFAM NMT1 THI5 like K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000001964 233.0
PJD1_k127_960212_24 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004214 226.0
PJD1_k127_960212_25 anti-sigma regulatory factor, serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000001892 191.0
PJD1_k127_960212_26 Transport permease protein K09690 - - 0.0000000000000000000000000000000000000000000000001058 191.0
PJD1_k127_960212_27 - - - - 0.0000000000000000000000000000000000000000001211 163.0
PJD1_k127_960212_28 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000001174 164.0
PJD1_k127_960212_29 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749,K06378 - - 0.000000000000000000000000000000000000002862 151.0
PJD1_k127_960212_3 Stage II sporulation K07315 - 3.1.3.3 2.949e-291 906.0
PJD1_k127_960212_30 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.0000000000000000000000000000000000003374 146.0
PJD1_k127_960212_31 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000004784 145.0
PJD1_k127_960212_32 - - - - 0.000000000000000000000000000000007786 136.0
PJD1_k127_960212_33 Protein of unknown function (DUF559) - - - 0.00000000000000000000000000000008672 129.0
PJD1_k127_960212_34 PFAM peptidase - - - 0.000000000000000000000000000114 130.0
PJD1_k127_960212_35 Carrier of the growing fatty acid chain in fatty acid biosynthesis K01007,K02078 - 2.7.9.2 0.00000000000000000000147 98.0
PJD1_k127_960212_36 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078,K05553 - - 0.000000000000000000009227 93.0
PJD1_k127_960212_37 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.0000000000000002375 90.0
PJD1_k127_960212_38 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000006346 79.0
PJD1_k127_960212_39 Von Willebrand factor type A K02448 - - 0.00000105 51.0
PJD1_k127_960212_4 Radical SAM K04034 - 1.21.98.3 5.831e-225 704.0
PJD1_k127_960212_40 zinc metalloprotease K11749 - - 0.000008527 55.0
PJD1_k127_960212_5 sigma factor antagonist activity - - - 3.504e-223 698.0
PJD1_k127_960212_6 PFAM AMP-dependent synthetase and ligase K04110 - 6.2.1.25 3.02e-213 672.0
PJD1_k127_960212_7 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 3.081e-204 641.0
PJD1_k127_960212_8 PFAM Phenylalanine and histidine ammonia-lyase K01745,K10775 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009072,GO:0009698,GO:0009699,GO:0009800,GO:0009803,GO:0009987,GO:0016043,GO:0016053,GO:0016829,GO:0016840,GO:0016841,GO:0019438,GO:0019748,GO:0019752,GO:0022607,GO:0032787,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044550,GO:0045548,GO:0046394,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 4.3.1.24,4.3.1.3 4.167e-194 654.0
PJD1_k127_960212_9 PFAM glycoside hydrolase, family 3 domain protein K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 572.0
PJD1_k127_975920_0 metalloendopeptidase activity K08602 - - 9.728e-274 847.0
PJD1_k127_975920_1 Belongs to the peptidase M50B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 518.0
PJD1_k127_975920_2 zinc-ribbon family - - - 0.00000000000000000001046 92.0
PJD1_k127_991629_0 Bacterial transcriptional activator domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 562.0
PJD1_k127_991629_1 outer membrane autotransporter barrel - - - 0.0000000000000000000007743 103.0
PJD1_k127_992716_0 Resolvase, RNase H domain protein fold K06959 - - 0.0 1019.0
PJD1_k127_992716_1 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 504.0
PJD1_k127_992716_11 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000000000000000001235 98.0
PJD1_k127_992716_12 - - - - 0.00002003 53.0
PJD1_k127_992716_2 Belongs to the peptidase S8 family K08651 - 3.4.21.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 488.0
PJD1_k127_992716_3 Belongs to the glycosyl hydrolase family 6 K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 400.0
PJD1_k127_992716_4 - - - - 0.0000000000000000000000000000000000000000000000000000152 200.0
PJD1_k127_992716_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000004076 149.0
PJD1_k127_992716_7 Resolvase, RNase H domain protein fold K06959 - - 0.000000000000000000000000000000003878 131.0
PJD1_k127_992716_8 metallopeptidase activity - - - 0.00000000000000000000000000000003176 141.0
PJD1_k127_994308_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 4.051e-234 732.0
PJD1_k127_994308_1 Peptidase U62 modulator of DNA gyrase K03568 - - 1.765e-227 712.0
PJD1_k127_994308_10 unfolded protein binding K04043 - - 0.00000000000000000000000007608 117.0
PJD1_k127_994308_11 - - - - 0.000000000000000000000003004 110.0
PJD1_k127_994308_12 Binding-protein-dependent transport system inner membrane component K02029 - - 0.0000000000000000000001808 98.0
PJD1_k127_994308_13 - - - - 0.000000000000000000002797 105.0
PJD1_k127_994308_14 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000000000000006946 84.0
PJD1_k127_994308_16 TIGRFAM aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein K02051,K15553 - - 0.000000000000147 82.0
PJD1_k127_994308_18 PFAM NADPH-dependent FMN reductase - - - 0.000000008468 60.0
PJD1_k127_994308_2 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 471.0
PJD1_k127_994308_20 - - - - 0.0001071 53.0
PJD1_k127_994308_3 AMP-binding enzyme C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008528 381.0
PJD1_k127_994308_4 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 367.0
PJD1_k127_994308_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 307.0
PJD1_k127_994308_6 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000001831 210.0
PJD1_k127_994308_7 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000002753 198.0
PJD1_k127_994308_8 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000005369 175.0
PJD1_k127_994308_9 Bacterial extracellular solute-binding proteins, family 3 - - - 0.00000000000000000000000002885 119.0
PJD1_k127_997668_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009207 585.0
PJD1_k127_997668_1 PFAM Deoxyribonuclease II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006712 437.0
PJD1_k127_997668_10 Uncharacterized ACR, COG1993 - - - 0.000000000000000000002363 94.0
PJD1_k127_997668_11 B12 binding domain K04034 - 1.21.98.3 0.0000000000000000001326 89.0
PJD1_k127_997668_2 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K02440,K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 410.0
PJD1_k127_997668_3 Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 394.0
PJD1_k127_997668_4 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 346.0
PJD1_k127_997668_5 PFAM ADP-ribosylation Crystallin J1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007158 321.0
PJD1_k127_997668_6 DnaJ molecular chaperone homology domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001019 236.0
PJD1_k127_997668_7 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000242 225.0
PJD1_k127_997668_8 Resolvase, N terminal domain - - - 0.0000000000000000000000000000000000000000000001273 172.0
PJD1_k127_997668_9 Belongs to the RNase T2 family K01166 - 3.1.27.1 0.00000000000000000000000000000000000000000003536 183.0