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Overview

ID MAG02872
Name PJD1_bin.39
Sample SMP0067
Taxonomy
Kingdom Bacteria
Phylum Nitrospirota
Class Thermodesulfovibrionia
Order Thermodesulfovibrionales
Family UBA6898
Genus JAOUFP01
Species
Assembly information
Completeness (%) 79.99
Contamination (%) 0.96
GC content (%) 48.0
N50 (bp) 5,485
Genome size (bp) 2,025,017

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2040

Gene name Description KEGG GOs EC E-value Score Sequence
PJD1_k127_1005965_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1338.0
PJD1_k127_1005965_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 375.0
PJD1_k127_1005965_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000003099 147.0
PJD1_k127_102736_0 FAD dependent oxidoreductase K16885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006656 592.0
PJD1_k127_102736_1 reductase, alpha subunit K00394 - 1.8.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 517.0
PJD1_k127_102736_2 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.000000000000000000000000000001801 123.0
PJD1_k127_102984_0 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 7.975e-205 649.0
PJD1_k127_102984_1 protocatechuate 3,4-dioxygenase activity K03381 - 1.13.11.1 0.0000000000000000000000000000000000000000001078 164.0
PJD1_k127_103073_0 rRNA (uridine-N3-)-methyltransferase activity K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005911 269.0
PJD1_k127_103073_1 PFAM histidine kinase, HAMP region domain protein K03406 - - 0.00000000005278 66.0
PJD1_k127_103783_0 Protein of unknown function (DUF520) K09767 - - 0.00000000000000000000000000000000000000000000000000000001202 202.0
PJD1_k127_103783_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000002349 176.0
PJD1_k127_103783_2 Conserved hypothetical protein 698 - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000003937 113.0
PJD1_k127_103893_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 1.218e-230 729.0
PJD1_k127_103893_1 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 524.0
PJD1_k127_103893_2 Peptidase U62 modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007245 521.0
PJD1_k127_103893_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 438.0
PJD1_k127_103893_4 Transcriptional regulator - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007333 374.0
PJD1_k127_103893_5 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 317.0
PJD1_k127_103893_6 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000003413 269.0
PJD1_k127_103893_7 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000002065 223.0
PJD1_k127_1040853_0 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 565.0
PJD1_k127_1040853_1 TIGRFAM Tat (twin-arginine translocation) pathway signal sequence K00184 - - 0.00000000000000000000000000000000000000000004588 162.0
PJD1_k127_105552_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 1.779e-208 653.0
PJD1_k127_105552_1 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 414.0
PJD1_k127_105552_2 3-oxoacyl- acyl-carrier-protein synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 320.0
PJD1_k127_105552_3 NmrA-like family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000009509 198.0
PJD1_k127_105552_4 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.000000000000000000000000000000002061 132.0
PJD1_k127_105552_5 PFAM Rieske 2Fe-2S K02636 - 1.10.9.1 0.0000000000000000000000000003426 118.0
PJD1_k127_105552_6 SMART helix-turn-helix domain protein K15539 - - 0.000000000000000000003389 103.0
PJD1_k127_105552_7 Nitrate reductase delta subunit - - - 0.0000000000001341 77.0
PJD1_k127_105552_8 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.00000000001582 67.0
PJD1_k127_106082_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000002121 245.0
PJD1_k127_106082_1 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.00000000000000000000000000000000000000000000002936 176.0
PJD1_k127_106082_2 SEC-C Motif Domain Protein - - - 0.0000000004963 67.0
PJD1_k127_1069408_0 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004785 609.0
PJD1_k127_1069408_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007869 276.0
PJD1_k127_1069408_10 O-antigen ligase K02847 - - 0.000002148 60.0
PJD1_k127_1069408_2 transferase activity, transferring glycosyl groups K02844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001916 255.0
PJD1_k127_1069408_3 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001557 239.0
PJD1_k127_1069408_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000641 208.0
PJD1_k127_1069408_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000002912 160.0
PJD1_k127_1069408_6 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000004529 143.0
PJD1_k127_1069408_7 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000001156 147.0
PJD1_k127_1069408_8 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.0000000000000006538 79.0
PJD1_k127_1069408_9 Lipopolysaccharide kinase (Kdo/WaaP) family K07178 - 2.7.11.1 0.0000000004412 70.0
PJD1_k127_108556_0 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001273 248.0
PJD1_k127_108556_1 Single-strand binding protein family K03111 - - 0.00000000000000000000000000000000000000004682 154.0
PJD1_k127_108556_2 Protein of unknown function (DUF507) - - - 0.00000000000000000000000000119 114.0
PJD1_k127_108556_3 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000009614 109.0
PJD1_k127_108556_4 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000214 104.0
PJD1_k127_1086940_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.0 1009.0
PJD1_k127_1086940_1 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 4.691e-268 844.0
PJD1_k127_1086940_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 579.0
PJD1_k127_1086940_3 acetyl-CoA catabolic process K00197 - 2.1.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004211 504.0
PJD1_k127_1086940_4 one-carbon metabolic process K00194,K00198 - 1.2.7.4,2.1.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006161 381.0
PJD1_k127_1086940_5 Pterin binding enzyme K00548,K15023 - 2.1.1.13,2.1.1.258 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008694 364.0
PJD1_k127_1086940_6 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain K00528,K16951 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 364.0
PJD1_k127_1086940_7 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000283 234.0
PJD1_k127_1095507_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 3.953e-301 925.0
PJD1_k127_1095507_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02652 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 534.0
PJD1_k127_1095507_2 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 364.0
PJD1_k127_1095507_3 Bacterial type II and III secretion system protein K02453,K03219 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 348.0
PJD1_k127_1095507_4 Type II secretion system (T2SS), protein K K02460 - - 0.000000000000000000000000001805 124.0
PJD1_k127_1095507_5 MlaD protein K02067 - - 0.00000000002273 66.0
PJD1_k127_1095507_6 Pilus assembly protein K02461,K02662,K02663,K12288 GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.0001122 54.0
PJD1_k127_110055_0 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 361.0
PJD1_k127_110055_1 Cation efflux family K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 348.0
PJD1_k127_110055_2 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000001808 221.0
PJD1_k127_1104666_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.138e-285 886.0
PJD1_k127_1104666_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 318.0
PJD1_k127_1104666_2 3' exoribonuclease family, domain 2 K00989 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 309.0
PJD1_k127_1104666_3 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000034 192.0
PJD1_k127_1104666_4 N-Acetylmuramoyl-L-alanine amidase K01448,K02172 - 3.5.1.28 0.0000000000000000000000008304 116.0
PJD1_k127_1104666_5 Sporulation and spore germination - - - 0.0000000000001209 78.0
PJD1_k127_1136198_0 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 2.297e-243 772.0
PJD1_k127_1136198_1 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 328.0
PJD1_k127_1136198_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000001728 240.0
PJD1_k127_1136198_3 Transcriptional regulator, MerR family - - - 0.000000000000000000000000000000000059 138.0
PJD1_k127_1136198_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000005945 99.0
PJD1_k127_1136198_5 GAF domain - - - 0.0003892 52.0
PJD1_k127_115706_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 595.0
PJD1_k127_115706_1 TIGRFAM Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 300.0
PJD1_k127_115706_2 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000003712 134.0
PJD1_k127_115706_3 anti-sigma regulatory factor K04757 - 2.7.11.1 0.0000000000000000000000000002931 119.0
PJD1_k127_115706_4 STAS domain K04749 - - 0.0000000000000000000000000004135 117.0
PJD1_k127_118240_0 all-trans-retinol 13,14-reductase activity K09516,K09835 - 1.3.99.23,5.2.1.13 4.822e-245 766.0
PJD1_k127_118240_1 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 436.0
PJD1_k127_118240_2 PFAM magnesium chelatase ChlI subunit K07391 - - 0.00000000000000000000000000000000000000000000002634 173.0
PJD1_k127_118240_4 intracellular signal transduction - - - 0.0000695 46.0
PJD1_k127_119843_0 Belongs to the precorrin methyltransferase family K13542 - 2.1.1.107,4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 570.0
PJD1_k127_119843_1 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000003015 138.0
PJD1_k127_1225459_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 534.0
PJD1_k127_1225459_1 TIGRFAM phosphomethylpyrimidine kinase K00868,K00941,K14153 - 2.5.1.3,2.7.1.35,2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000002327 222.0
PJD1_k127_1249915_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006057 478.0
PJD1_k127_1249915_1 queuosine biosynthetic process K03470,K09765 - 1.17.99.6,3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000005925 215.0
PJD1_k127_1249915_2 Protein of unknown function (DUF2905) - - - 0.00000000000000000008989 91.0
PJD1_k127_127513_0 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 289.0
PJD1_k127_127513_1 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000009327 235.0
PJD1_k127_127513_2 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000001883 104.0
PJD1_k127_127513_3 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000006654 79.0
PJD1_k127_127513_4 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0008150,GO:0015934,GO:0016020,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071944,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000128 73.0
PJD1_k127_133185_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 505.0
PJD1_k127_133185_1 Protein of unknown function (DUF2950) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 417.0
PJD1_k127_133185_2 Protein of unknown function (DUF3300) - - - 0.0000000000000001438 86.0
PJD1_k127_133185_3 - - - - 0.00001017 47.0
PJD1_k127_1368873_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 539.0
PJD1_k127_137725_0 Transglycosylase K05365,K05366 - 2.4.1.129,3.4.16.4 1.346e-228 722.0
PJD1_k127_137725_1 Aminotransferase class-III K01845 - 5.4.3.8 8.869e-207 650.0
PJD1_k127_137725_2 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005754 421.0
PJD1_k127_137725_3 Menaquinol oxidoreductase complex Cbc4, cytochrome c subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000002302 238.0
PJD1_k127_137725_4 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769,K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000002733 207.0
PJD1_k127_137725_5 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000008469 163.0
PJD1_k127_137725_6 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000002898 150.0
PJD1_k127_137725_7 NapC/NirT cytochrome c family, N-terminal region - - - 0.0000000000000000000000000000000000009994 151.0
PJD1_k127_137725_8 NapC/NirT cytochrome c family, N-terminal region - - - 0.0000000000000000000000000000007519 134.0
PJD1_k127_137725_9 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000000003079 122.0
PJD1_k127_1399577_0 HMGL-like K01666 - 4.1.3.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 406.0
PJD1_k127_1399577_1 PFAM KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.000000000000000000000000000000000000000000002934 172.0
PJD1_k127_1399577_2 - - - - 0.0000002899 57.0
PJD1_k127_1399577_3 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.000000291 52.0
PJD1_k127_14084_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000003999 223.0
PJD1_k127_14084_1 response regulator - - - 0.0000000000000000000000000000000000000000000000000000009562 198.0
PJD1_k127_14084_2 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000000006534 132.0
PJD1_k127_145174_0 Sugar (and other) transporter K03446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009633 445.0
PJD1_k127_145174_1 HlyD membrane-fusion protein of T1SS K03543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005147 367.0
PJD1_k127_146480_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000001521 210.0
PJD1_k127_146480_1 MGS-like domain - - - 0.000000000000000000000000000000000000000000000000009263 188.0
PJD1_k127_146480_2 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.0000000000000000000000000000002241 126.0
PJD1_k127_146480_3 - - - - 0.000000000000000000000001536 109.0
PJD1_k127_1584864_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 557.0
PJD1_k127_1584864_1 PFAM PfkB K00856 - 2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 402.0
PJD1_k127_1584864_2 COG1194 A G-specific DNA glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 327.0
PJD1_k127_1584864_3 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004893 278.0
PJD1_k127_1584864_4 Binds directly to 16S ribosomal RNA K02968 - - 0.000003396 49.0
PJD1_k127_1584864_5 deoxyhypusine monooxygenase activity - - - 0.0004252 49.0
PJD1_k127_1594001_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 521.0
PJD1_k127_1594001_1 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008235 389.0
PJD1_k127_1594001_2 Protein of unknown function (DUF3641) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 318.0
PJD1_k127_1594001_3 PFAM glucosamine galactosamine-6-phosphate isomerase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000001459 215.0
PJD1_k127_1594001_4 glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000002044 207.0
PJD1_k127_1594001_5 peroxiredoxin activity K00627,K01607 - 2.3.1.12,4.1.1.44 0.00000000000000000000000000000000000009949 144.0
PJD1_k127_1594218_0 sensor histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001335 285.0
PJD1_k127_1596315_0 DegT/DnrJ/EryC1/StrS aminotransferase family K13010 - 2.6.1.102 4.852e-200 627.0
PJD1_k127_1596315_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 545.0
PJD1_k127_1596315_2 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009418 532.0
PJD1_k127_1596315_3 Nodulation protein S (NodS) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 343.0
PJD1_k127_1596315_4 Glycosyl transferase, family 2 K16555 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 296.0
PJD1_k127_1596315_5 Glycosyl transferase family group 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002694 269.0
PJD1_k127_1596315_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000003341 220.0
PJD1_k127_1596315_7 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000001147 142.0
PJD1_k127_1596315_8 Winged helix-turn-helix DNA-binding - - - 0.000000031 57.0
PJD1_k127_1597023_0 Sigma-54 interaction domain K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005787 580.0
PJD1_k127_1597023_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000859 415.0
PJD1_k127_1597023_2 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001146 277.0
PJD1_k127_1597023_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004482 246.0
PJD1_k127_1597023_4 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000000000000000000004416 225.0
PJD1_k127_1597023_5 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000006011 179.0
PJD1_k127_1597023_6 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000004045 118.0
PJD1_k127_1597023_7 - - - - 0.00000000000000008128 86.0
PJD1_k127_1598432_0 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 512.0
PJD1_k127_1598432_1 PFAM 4Fe-4S K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 429.0
PJD1_k127_1598432_2 PFAM Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 411.0
PJD1_k127_1598432_3 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000001837 210.0
PJD1_k127_1600201_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 401.0
PJD1_k127_1600201_1 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 304.0
PJD1_k127_1600201_2 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000006517 213.0
PJD1_k127_1600201_3 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000001196 208.0
PJD1_k127_1600201_4 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00171,K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000001462 183.0
PJD1_k127_1600201_5 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000000006437 117.0
PJD1_k127_1600201_6 Domain of unknown function (DUF370) K09777 - - 0.0000000000000000000000000007615 115.0
PJD1_k127_1600201_7 Tetratricopeptide repeat - - - 0.000000000000000000003211 106.0
PJD1_k127_1600201_8 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.000000006571 56.0
PJD1_k127_1612202_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 7.926e-233 730.0
PJD1_k127_1615373_1 Histidine kinase K07641,K07642,K07711 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001151 267.0
PJD1_k127_1615373_2 PFAM response regulator receiver K02483,K18344 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001103 246.0
PJD1_k127_1615373_3 phosphatidate phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000001654 224.0
PJD1_k127_1615373_4 Belongs to the UPF0235 family K09131 - - 0.000000000000004717 78.0
PJD1_k127_1615373_5 - - - - 0.00001726 51.0
PJD1_k127_1618679_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 430.0
PJD1_k127_1618679_1 - K07112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000001602 193.0
PJD1_k127_1618679_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000566 107.0
PJD1_k127_1618679_3 Universal stress protein family - - - 0.00000000001069 72.0
PJD1_k127_1618679_4 AMP binding - - - 0.00000001345 63.0
PJD1_k127_1618679_5 Universal stress protein family - - - 0.0000001112 61.0
PJD1_k127_1630536_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 4.488e-264 824.0
PJD1_k127_1630536_1 Doubled CXXCH motif (Paired_CXXCH_1) - - - 1.032e-194 615.0
PJD1_k127_1630536_2 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000001195 235.0
PJD1_k127_1641935_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 1.494e-210 662.0
PJD1_k127_1641935_1 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 470.0
PJD1_k127_1641935_10 AhpC/TSA family K03386 - 1.11.1.15 0.0000000000000009201 78.0
PJD1_k127_1641935_11 - - - - 0.0006436 46.0
PJD1_k127_1641935_2 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004782 248.0
PJD1_k127_1641935_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000005523 246.0
PJD1_k127_1641935_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000297 202.0
PJD1_k127_1641935_5 Belongs to the Fur family K03711,K09825 - - 0.0000000000000000000000000000000000000000000000003038 179.0
PJD1_k127_1641935_6 CHASE K02488,K21009 - 2.7.7.65 0.0000000000000000000000000000000000000000000007935 184.0
PJD1_k127_1641935_7 - - - - 0.000000000000000000000000000000000000000007262 158.0
PJD1_k127_1641935_8 PFAM Carboxymuconolactone decarboxylase - - - 0.0000000000000000000000000000000001255 136.0
PJD1_k127_1641935_9 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000004133 91.0
PJD1_k127_1642054_0 6 heme-binding sites - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 391.0
PJD1_k127_1642054_1 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000003369 219.0
PJD1_k127_1649870_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000001446 181.0
PJD1_k127_1649870_1 - - - - 0.0000006677 52.0
PJD1_k127_1651266_0 40-residue yvtn family beta-propeller repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005984 577.0
PJD1_k127_1651266_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000003625 175.0
PJD1_k127_1651266_2 Methyltransferase type 11 - - - 0.00000000000000000000000000000000001999 142.0
PJD1_k127_1651266_3 Domain of unknown function (DUF305) - - - 0.00000000000000000000000000000000005429 139.0
PJD1_k127_1659628_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 7.723e-204 643.0
PJD1_k127_1659628_1 Receptor family ligand binding region K01999 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006865,GO:0008150,GO:0015711,GO:0015803,GO:0015804,GO:0015818,GO:0015820,GO:0015829,GO:0015849,GO:0016597,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046942,GO:0051179,GO:0051234,GO:0070728,GO:0071702,GO:0071705 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003738 400.0
PJD1_k127_1659628_10 NAD binding domain of 6-phosphogluconate dehydrogenase - - - 0.000000002439 60.0
PJD1_k127_1659628_2 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 346.0
PJD1_k127_1659628_3 Creatinase Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 301.0
PJD1_k127_1659628_4 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000004994 241.0
PJD1_k127_1659628_5 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000317 176.0
PJD1_k127_1659628_6 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000004538 179.0
PJD1_k127_1659628_7 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000001669 171.0
PJD1_k127_1659628_8 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.00000000000000000000000000000000000000004654 155.0
PJD1_k127_1659628_9 Roadblock/LC7 domain - - - 0.000000000000000008232 87.0
PJD1_k127_1660679_0 Aminotransferase class-V K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 433.0
PJD1_k127_1660679_1 citrate synthase K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 398.0
PJD1_k127_1660679_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000000001659 204.0
PJD1_k127_1660679_3 FeS cluster assembly scaffold protein NifU K04488 - - 0.000000000000000000000000000000000000000000000000000000008532 199.0
PJD1_k127_1660679_4 Uncharacterized protein conserved in bacteria (DUF2155) - - - 0.000000000000000000000000000000001271 138.0
PJD1_k127_1660679_5 Sulfurtransferase TusA - - - 0.00000000000000000000005593 100.0
PJD1_k127_1660679_6 - - - - 0.00000008111 53.0
PJD1_k127_1660679_7 - - - - 0.00001405 48.0
PJD1_k127_1667498_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 9.247e-277 865.0
PJD1_k127_1667498_1 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.000000000000003879 77.0
PJD1_k127_1671088_0 PFAM Type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 387.0
PJD1_k127_1671088_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 357.0
PJD1_k127_1671088_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001275 270.0
PJD1_k127_1671088_3 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000003537 216.0
PJD1_k127_1671088_4 peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000002184 169.0
PJD1_k127_1671088_5 Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.000000000000000000000000000000000000000002985 158.0
PJD1_k127_1671088_7 - - - - 0.000000000000008814 87.0
PJD1_k127_1673581_0 helicase K03722 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 344.0
PJD1_k127_1673581_1 PFAM Bacterial regulatory protein, Fis family K17763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001484 284.0
PJD1_k127_1674274_0 phosphorelay signal transduction system K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009387 306.0
PJD1_k127_1674274_1 SWI complex, BAF60b domains - - - 0.00000000000000000000000000000004075 131.0
PJD1_k127_1674274_2 TIGRFAM C_GCAxxG_C_C family protein - - - 0.000000000000000000000000000002245 126.0
PJD1_k127_1674274_3 Belongs to the UPF0307 family K09889 - - 0.00000000000000000000000000001643 124.0
PJD1_k127_1674274_4 - - - - 0.00009659 51.0
PJD1_k127_1684319_0 Cysteine rich repeat - - - 0.0000000000000000000000000000000000000000000000005432 179.0
PJD1_k127_1684319_1 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000000000000000000000000262 124.0
PJD1_k127_1684319_2 - - - - 0.000000000000000000114 94.0
PJD1_k127_168475_0 Surface antigen K07277 - - 1.347e-245 777.0
PJD1_k127_168831_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008966,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019538,GO:0034641,GO:0034654,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046777,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 352.0
PJD1_k127_168831_1 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 327.0
PJD1_k127_168831_2 YbbR-like protein - - - 0.000000000000000000000000000000000000000000007257 170.0
PJD1_k127_168831_3 Ami_2 - - - 0.0000000003501 66.0
PJD1_k127_168831_4 - - - - 0.000000004378 57.0
PJD1_k127_1695107_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 475.0
PJD1_k127_1695107_1 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000844 240.0
PJD1_k127_1695107_2 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000001306 93.0
PJD1_k127_1705153_0 thiosulfate sulfurtransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003874 280.0
PJD1_k127_1705153_1 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000002825 251.0
PJD1_k127_1705153_2 PFAM Rhodanese domain protein - - - 0.000000000000000000000000000231 122.0
PJD1_k127_1707356_0 AAA domain, putative AbiEii toxin, Type IV TA system K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 312.0
PJD1_k127_1707356_1 intermembrane phospholipid transfer K07323 - - 0.000000000000000000000000000000000000000000000000000001423 198.0
PJD1_k127_1707356_2 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000319 182.0
PJD1_k127_1707356_3 PFAM VacJ family lipoprotein K04754 - - 0.0003061 43.0
PJD1_k127_1712749_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 371.0
PJD1_k127_1712749_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009562 318.0
PJD1_k127_1712749_2 Responsible for synthesis of pseudouridine from uracil K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000003046 253.0
PJD1_k127_1712749_3 PFAM Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000001573 235.0
PJD1_k127_1712749_4 CHASE K02488,K21009 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000004616 207.0
PJD1_k127_1712749_5 Phosphoesterase K07095 - - 0.000000000000000000000000000000000000000000000000001028 187.0
PJD1_k127_1712749_6 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000002956 71.0
PJD1_k127_1712749_7 electron transfer activity K05337,K17247 - - 0.0000008514 52.0
PJD1_k127_1713624_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.297e-208 655.0
PJD1_k127_1713624_1 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 327.0
PJD1_k127_1713624_2 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000003325 209.0
PJD1_k127_1713624_3 Binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000000000000000000000000003397 196.0
PJD1_k127_1713624_4 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000001932 179.0
PJD1_k127_1713624_5 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 - 0.00000000000000000000000000000000007465 133.0
PJD1_k127_1713624_6 Ribosomal protein L36 K02919 - - 0.000000000000002342 75.0
PJD1_k127_1713624_7 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000001922 65.0
PJD1_k127_1714258_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000001661 186.0
PJD1_k127_1725891_0 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000001639 244.0
PJD1_k127_1725891_1 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000005082 193.0
PJD1_k127_1727546_0 Transcriptional regulatory protein, C terminal K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 329.0
PJD1_k127_1727546_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004044 270.0
PJD1_k127_1727546_3 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000002515 219.0
PJD1_k127_1727546_4 Cytidylyltransferase family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000006589 201.0
PJD1_k127_1733337_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 399.0
PJD1_k127_1733337_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006765 270.0
PJD1_k127_1739745_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004077 437.0
PJD1_k127_1739745_1 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000001756 110.0
PJD1_k127_1739745_2 Pfam:DUF1049 - - - 0.000002905 53.0
PJD1_k127_1765125_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 368.0
PJD1_k127_1765125_1 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000004797 126.0
PJD1_k127_1765125_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000783 55.0
PJD1_k127_1766783_0 Actin K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 537.0
PJD1_k127_1766783_1 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 434.0
PJD1_k127_1766783_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 351.0
PJD1_k127_1766783_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000003915 205.0
PJD1_k127_1766783_4 shape-determining protein MreC K03570 - - 0.0000000000000000000000000000000000000000000000003707 185.0
PJD1_k127_1766783_5 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 0.000000000000000000000000000000000000008092 146.0
PJD1_k127_1766783_6 RDD family - - - 0.000000000000000000000000002472 115.0
PJD1_k127_1790075_0 NADH Ubiquinone plastoquinone (Complex I) K12141 - - 7.982e-197 623.0
PJD1_k127_1790075_1 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006155 542.0
PJD1_k127_1790075_2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003565 462.0
PJD1_k127_1790075_3 Glucose dehydrogenase C-terminus K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 385.0
PJD1_k127_1790075_4 hydrogenase 4 membrane K12140 - - 0.000000000000000000000000000000000000000000000000000000000000000000001204 243.0
PJD1_k127_1790075_5 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000004269 229.0
PJD1_k127_1790075_6 NADH dehydrogenase - - - 0.000000000000000000000000000000000000004461 149.0
PJD1_k127_1790107_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 2.167e-200 630.0
PJD1_k127_180325_0 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 2.199e-263 840.0
PJD1_k127_180325_1 AMP-binding enzyme C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006351 639.0
PJD1_k127_180325_10 Methylene-tetrahydrofolate reductase C terminal - - - 0.00000000000000000000000000000000000004127 144.0
PJD1_k127_180325_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000001058 87.0
PJD1_k127_180325_12 PFAM glycoside hydrolase, family 13 domain protein - - - 0.00000000000000005332 86.0
PJD1_k127_180325_13 protein secretion K03116,K03117 - - 0.0000000000002243 74.0
PJD1_k127_180325_14 Helix-turn-helix domain K15539 - - 0.0000000000003594 73.0
PJD1_k127_180325_15 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 - 1.8.1.4 0.000000003417 59.0
PJD1_k127_180325_16 response regulator - - - 0.000000004354 64.0
PJD1_k127_180325_2 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004231 537.0
PJD1_k127_180325_3 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 477.0
PJD1_k127_180325_4 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 336.0
PJD1_k127_180325_5 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 310.0
PJD1_k127_180325_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006456 280.0
PJD1_k127_180325_7 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009412 263.0
PJD1_k127_180325_8 Dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000004163 211.0
PJD1_k127_180325_9 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.000000000000000000000000000000000000000000000000000001784 200.0
PJD1_k127_1822560_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 9.261e-290 904.0
PJD1_k127_1822560_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 316.0
PJD1_k127_1822560_2 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000001694 134.0
PJD1_k127_1822560_3 Belongs to the peptidase M16 family - - - 0.00000000000000000000000002977 110.0
PJD1_k127_1826336_0 SMART Nucleotide binding protein, PINc K07175 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 376.0
PJD1_k127_1826336_1 - - - - 0.000000000000000000000000000000000000004139 155.0
PJD1_k127_1826336_2 phosphohydrolase - - - 0.000000000000000000002934 104.0
PJD1_k127_1826336_3 - - - - 0.0000000000000000003081 95.0
PJD1_k127_1826336_4 Protein conserved in bacteria - - - 0.0000000006418 70.0
PJD1_k127_1826336_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.00001378 50.0
PJD1_k127_1830874_0 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 500.0
PJD1_k127_1830874_1 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000007498 213.0
PJD1_k127_1831909_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 307.0
PJD1_k127_1831909_1 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000009087 199.0
PJD1_k127_1859270_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 364.0
PJD1_k127_1859270_1 ABC-type Mn2 Zn2 transport system, permease component K09816,K09819,K19976 - - 0.000000000000000000000000000000000000000000000000000000001486 209.0
PJD1_k127_1859270_2 Domain of unknown function (DUF1992) - - - 0.000000000000000000000000000000000000000001902 158.0
PJD1_k127_1859270_3 PFAM AMP-dependent synthetase and ligase K01908 - 6.2.1.17 0.000000000000000000000000000001346 121.0
PJD1_k127_1859270_4 ABC transporter K09817 - - 0.0000000000001284 72.0
PJD1_k127_1859270_5 Resolvase - - - 0.00000002817 55.0
PJD1_k127_1860220_0 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.00000000000000000000000000000000000000000000000000000000000000001218 238.0
PJD1_k127_1860220_1 Putative zinc- or iron-chelating domain - - - 0.00000000000000000000000000000000000000000000000000000000005046 210.0
PJD1_k127_1882496_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 7.11e-267 838.0
PJD1_k127_1882496_1 PSP1 C-terminal conserved region - - - 0.00000000000000000000000000000000000000000000000000000000000000000003564 241.0
PJD1_k127_1882496_2 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000002089 214.0
PJD1_k127_1898637_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 1.653e-229 721.0
PJD1_k127_1898637_1 Evidence 2b Function of strongly homologous gene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 545.0
PJD1_k127_1898637_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 540.0
PJD1_k127_1898637_3 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 524.0
PJD1_k127_1898637_4 Large family of predicted nucleotide-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 331.0
PJD1_k127_1898637_5 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.000000000000000000000000000000000000000000000000000000002542 207.0
PJD1_k127_1898637_6 competence protein - - - 0.000000000000000000000000000000000000000000001669 175.0
PJD1_k127_1898637_7 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.0000000000000000000005181 98.0
PJD1_k127_1898637_8 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000001107 88.0
PJD1_k127_190838_0 Putative glycosyl hydrolase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 488.0
PJD1_k127_190838_1 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000009489 150.0
PJD1_k127_190838_2 PFAM Polysaccharide deacetylase - - - 0.000000000000000000000006286 102.0
PJD1_k127_1925363_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 3.048e-263 830.0
PJD1_k127_1925363_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 473.0
PJD1_k127_1925363_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 445.0
PJD1_k127_1925363_3 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007534 386.0
PJD1_k127_1925363_4 DNA recombination-mediator protein A K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 336.0
PJD1_k127_1925363_5 PFAM cytochrome c assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 322.0
PJD1_k127_1925363_6 Mo-molybdopterin cofactor metabolic process K03753,K07588 - - 0.000000000156 69.0
PJD1_k127_1925363_7 - - - - 0.0000000003937 61.0
PJD1_k127_1925363_9 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000004673 49.0
PJD1_k127_1969000_0 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 434.0
PJD1_k127_1976983_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001363 274.0
PJD1_k127_1976983_1 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000006131 199.0
PJD1_k127_1976983_2 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000001898 117.0
PJD1_k127_2006453_0 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 469.0
PJD1_k127_2006453_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 437.0
PJD1_k127_2006453_10 - - - - 0.0004293 44.0
PJD1_k127_2006453_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 412.0
PJD1_k127_2006453_3 response regulator K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003183 407.0
PJD1_k127_2006453_4 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000003442 231.0
PJD1_k127_2006453_5 Signal transduction histidine kinase K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000006029 182.0
PJD1_k127_2006453_6 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000001936 145.0
PJD1_k127_2006453_7 C4-type zinc ribbon domain K07164 - - 0.00000000000000000000000000000001013 136.0
PJD1_k127_2006453_8 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000001656 98.0
PJD1_k127_2023194_0 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.0000000000000000000000000004202 125.0
PJD1_k127_2023194_1 Phage integrase, N-terminal SAM-like domain K04763 - - 0.00000000000000000001248 102.0
PJD1_k127_2023194_2 Staphylococcal nuclease homologues K01174,K07038 - 3.1.31.1 0.0003638 46.0
PJD1_k127_209169_0 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 6.307e-272 856.0
PJD1_k127_209169_1 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 292.0
PJD1_k127_209169_2 Histidine kinase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001958 273.0
PJD1_k127_209169_3 chlorophyll binding K03286,K07275 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000008134 190.0
PJD1_k127_209169_4 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000533 122.0
PJD1_k127_2092289_0 PHP-associated K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000001621 226.0
PJD1_k127_2092289_1 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000001615 146.0
PJD1_k127_2092289_2 DRTGG domain - - - 0.000000000000000000000000000002963 123.0
PJD1_k127_2092289_3 DRTGG domain - - - 0.0000000000000000000000002609 111.0
PJD1_k127_2092289_4 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.000000313 56.0
PJD1_k127_215284_0 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 556.0
PJD1_k127_215284_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 477.0
PJD1_k127_215284_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 332.0
PJD1_k127_215284_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009782 298.0
PJD1_k127_215284_4 Carbon-nitrogen hydrolase - - - 0.00000000000000000000000000000000000000000000000000000006669 203.0
PJD1_k127_215284_5 Protein conserved in bacteria K07011 - - 0.0000000000000000000000000000000000000000000000000000001667 201.0
PJD1_k127_2167002_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004493 461.0
PJD1_k127_2167002_1 ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000002008 252.0
PJD1_k127_2167002_2 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000001653 239.0
PJD1_k127_2167002_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000001074 119.0
PJD1_k127_22352_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 291.0
PJD1_k127_22352_1 Tetratricopeptide repeat - - - 0.00000000427 65.0
PJD1_k127_22352_2 methyltransferase activity - - - 0.000002998 49.0
PJD1_k127_224539_0 FAD dependent oxidoreductase K07137 - - 2.787e-252 786.0
PJD1_k127_224539_1 Ammonium Transporter Family K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 591.0
PJD1_k127_224539_2 Class II release factor RF3, C-terminal domain K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000004484 123.0
PJD1_k127_224539_3 Cytochrome C' - - - 0.00005235 51.0
PJD1_k127_2255474_0 Histidine kinase K02482 - 2.7.13.3 0.00000000000000000000000005156 120.0
PJD1_k127_233093_0 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004315 332.0
PJD1_k127_233093_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000007185 220.0
PJD1_k127_233093_2 Membrane - - - 0.00000000003037 68.0
PJD1_k127_23641_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 529.0
PJD1_k127_23641_1 PFAM FRG domain - - - 0.0000000000000000000000000000000000002622 148.0
PJD1_k127_23641_4 2Fe-2S iron-sulfur cluster binding domain K00240,K00245 - 1.3.5.1,1.3.5.4 0.0002896 45.0
PJD1_k127_2385525_0 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 3.081e-282 891.0
PJD1_k127_2385525_1 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005625 433.0
PJD1_k127_2385525_2 diguanylate cyclase K02488 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001322 283.0
PJD1_k127_2386943_0 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007946 488.0
PJD1_k127_2386943_1 response regulator receiver K02481,K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 383.0
PJD1_k127_2386943_2 Domains HAMP, HisKA, HATPase_c, REC K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007125 333.0
PJD1_k127_2386943_3 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 307.0
PJD1_k127_2386943_4 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000004296 176.0
PJD1_k127_2386943_5 Response regulator, receiver - - - 0.000000000000000000000000000000854 125.0
PJD1_k127_2386943_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000005106 125.0
PJD1_k127_2386943_7 polysaccharide export K01991,K20988 - - 0.0000000000000000000000000005243 126.0
PJD1_k127_2386943_8 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.0000000000000002557 82.0
PJD1_k127_239137_0 Part of a membrane complex involved in electron transport K03617 - - 0.0000000000000000000000000000000000000000000000000000000000000001611 226.0
PJD1_k127_239137_1 Part of a membrane complex involved in electron transport K03613 - - 0.00000000000000000000000000000000000000000000000000002994 195.0
PJD1_k127_239137_2 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000000000001287 107.0
PJD1_k127_2398941_0 PFAM Glycosyl hydrolase family 3 N terminal domain K01207,K05349 - 3.2.1.21,3.2.1.52 0.000000000000000000000000000000000000000000000000000000002977 215.0
PJD1_k127_2403181_0 Putative diguanylate phosphodiesterase - - - 1.101e-208 681.0
PJD1_k127_2403181_1 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 4.454e-205 644.0
PJD1_k127_2403181_2 Fructose-bisphosphate aldolase class-II - - - 1.366e-198 628.0
PJD1_k127_2403181_3 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 319.0
PJD1_k127_2403181_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000002268 233.0
PJD1_k127_2403181_5 - - - - 0.00000000000000000000000000000000000000000000000000000000001388 216.0
PJD1_k127_2403181_6 PFAM Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000006238 179.0
PJD1_k127_2403181_7 - - - - 0.000000001858 61.0
PJD1_k127_2403181_8 Catalyzes two subsequent steps in gluconeogenesis the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P) K01622 - 3.1.3.11,4.1.2.13 0.000000009545 59.0
PJD1_k127_2403181_9 fructose-bisphosphate aldolase activity K01622 - 3.1.3.11,4.1.2.13 0.000000389 53.0
PJD1_k127_2413242_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1099.0
PJD1_k127_2413242_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000004962 251.0
PJD1_k127_2413242_2 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000001265 238.0
PJD1_k127_2413242_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000005126 215.0
PJD1_k127_2413242_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000001576 130.0
PJD1_k127_2413624_0 isocitrate dehydrogenase activity K00031 GO:0000287,GO:0003674,GO:0003824,GO:0004448,GO:0004450,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006102,GO:0008150,GO:0008152,GO:0008270,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044464,GO:0045333,GO:0046487,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:0071944,GO:0072350 1.1.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 382.0
PJD1_k127_2413624_1 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 287.0
PJD1_k127_2413624_2 HD domain K07023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002586 274.0
PJD1_k127_246096_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 2.439e-293 923.0
PJD1_k127_246096_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 400.0
PJD1_k127_246096_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 390.0
PJD1_k127_246096_3 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000001967 175.0
PJD1_k127_246096_4 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000000000000000000664 159.0
PJD1_k127_246096_5 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.000000000000000000007099 93.0
PJD1_k127_246096_6 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.0000000000000000002331 89.0
PJD1_k127_2474151_0 Abc transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000265 246.0
PJD1_k127_2474151_1 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000001515 227.0
PJD1_k127_2474151_2 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000002549 119.0
PJD1_k127_2497242_0 Bacterial regulatory protein, Fis family K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 558.0
PJD1_k127_2497242_1 GHKL domain K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000789 544.0
PJD1_k127_2497242_2 Adenosine specific kinase K09129 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005377 266.0
PJD1_k127_2497242_3 Histidine biosynthesis bifunctional protein HisIE K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000003261 163.0
PJD1_k127_2497242_5 Histidine biosynthesis bifunctional protein hisIE K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000002969 55.0
PJD1_k127_2505200_0 PD-(D/E)XK nuclease superfamily - - - 1.395e-213 690.0
PJD1_k127_2544321_0 (ABC) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007174 446.0
PJD1_k127_2544321_1 PFAM Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 299.0
PJD1_k127_2544321_2 THIoesterase K18700 - 3.1.2.29 0.000000000000000000000000000000000000000000000000000000003889 201.0
PJD1_k127_2544321_3 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000105 83.0
PJD1_k127_2544321_4 Rdx family K07401 - - 0.0000005189 53.0
PJD1_k127_2548460_0 - - - - 8.952e-227 708.0
PJD1_k127_2548460_1 cytochrome c peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009859 499.0
PJD1_k127_2548460_2 TIGRFAM oligopeptide dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031,K02032,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 362.0
PJD1_k127_2548460_3 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 344.0
PJD1_k127_2548460_4 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 308.0
PJD1_k127_2548460_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000006029 219.0
PJD1_k127_2548460_6 Histidine kinase - - - 0.000000000000000000000000000000000000000000000001916 181.0
PJD1_k127_2548460_7 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000003732 175.0
PJD1_k127_2548460_8 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000001157 137.0
PJD1_k127_2553858_0 UV-endonuclease UvdE K13281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 298.0
PJD1_k127_2553858_1 PFAM Spermine synthase K00797 - 2.5.1.16 0.000000000006382 71.0
PJD1_k127_2558358_0 TonB-dependent Receptor Plug K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 546.0
PJD1_k127_2558358_1 histidine kinase A domain protein domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003028 454.0
PJD1_k127_2558358_2 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000007885 113.0
PJD1_k127_256327_0 Elongation factor SelB, winged helix K03833 - - 1.028e-210 672.0
PJD1_k127_256327_1 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039 448.0
PJD1_k127_256327_2 Peptidase M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007058 425.0
PJD1_k127_256327_3 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) K03594 - 1.16.3.1 0.000000000000000000000000000000000004239 140.0
PJD1_k127_257061_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 8.005e-268 833.0
PJD1_k127_257061_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 473.0
PJD1_k127_257061_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 336.0
PJD1_k127_257061_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 291.0
PJD1_k127_257061_4 proteolysis K07059 - - 0.0000000000000000000000000000000000000000000000000000000000001435 219.0
PJD1_k127_257061_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000009271 192.0
PJD1_k127_257061_6 zinc-ribbon domain - - - 0.00000000000000000000000000000000000000000000000005343 190.0
PJD1_k127_257061_7 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000006907 132.0
PJD1_k127_257061_8 Domain of unknown function (DUF4445) - - - 0.00000000000001386 74.0
PJD1_k127_2571144_0 COG0058 Glucan phosphorylase - - - 2.746e-256 801.0
PJD1_k127_2571144_1 Protein conserved in bacteria - - - 1.093e-232 745.0
PJD1_k127_2571144_10 Tetratricopeptide repeat K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000009868 240.0
PJD1_k127_2571144_11 inositol monophosphate 1-phosphatase activity K01082,K01092 - 3.1.3.25,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000005361 220.0
PJD1_k127_2571144_12 Siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.000000000000000000000000000000000000000003172 162.0
PJD1_k127_2571144_13 TIGRFAM TIGR00268 family protein K06864 - - 0.00000000000000000000000001085 114.0
PJD1_k127_2571144_14 PFAM CBS domain containing protein - - - 0.000000000000000000002162 100.0
PJD1_k127_2571144_15 Methyltransferase domain - - - 0.00000000000000109 85.0
PJD1_k127_2571144_16 - - - - 0.000003879 54.0
PJD1_k127_2571144_2 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 599.0
PJD1_k127_2571144_3 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 558.0
PJD1_k127_2571144_4 PAS domain K09155 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009573 469.0
PJD1_k127_2571144_5 Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 382.0
PJD1_k127_2571144_6 Involved in molybdopterin and thiamine biosynthesis, family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 328.0
PJD1_k127_2571144_7 phosphatase activity K20881 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008477,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016798,GO:0016799,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050483,GO:0050484 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000863 276.0
PJD1_k127_2571144_8 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002391 254.0
PJD1_k127_2571144_9 Imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000007496 245.0
PJD1_k127_2573630_0 PAS fold - - - 0.0000000000000000000000006774 112.0
PJD1_k127_2573630_1 mRNA catabolic process - - - 0.0000000000000000006072 93.0
PJD1_k127_2573630_2 PFAM response regulator receiver - - - 0.000000000001403 76.0
PJD1_k127_2574110_0 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 556.0
PJD1_k127_2574110_1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 336.0
PJD1_k127_2574110_2 metal-dependent phosphohydrolase HD region - - - 0.0000000000000000000000000000000000000000000000000000000000000193 228.0
PJD1_k127_2574110_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000002049 203.0
PJD1_k127_2574110_4 PFAM response regulator receiver - - - 0.00000000000000000000000000001021 123.0
PJD1_k127_2603043_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.015e-225 705.0
PJD1_k127_2603043_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000001269 257.0
PJD1_k127_2603043_2 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000000000000000000000001295 183.0
PJD1_k127_2603043_3 aminopeptidase N - - - 0.000000000000000000000000003009 119.0
PJD1_k127_260796_0 ABC transporter C-terminal domain K15738 - - 1.636e-233 737.0
PJD1_k127_260796_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 374.0
PJD1_k127_260796_2 Protein of unknown function, DUF480 K09915 - - 0.000000000000000000000000000000000000000000000000000000000002706 215.0
PJD1_k127_260796_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000003456 209.0
PJD1_k127_260796_4 UPF0056 membrane protein K05595 - - 0.000000000000000000000000000000000000000000000000004003 188.0
PJD1_k127_260796_5 Cold shock K03704 - - 0.00000000000000000000000001852 109.0
PJD1_k127_260796_6 PFAM translation initiation factor SUI1 K03113 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0002190,GO:0002192,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0110017,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000002349 91.0
PJD1_k127_260796_7 - - - - 0.000000000000000001046 91.0
PJD1_k127_260796_8 geranylgeranyl reductase - - - 0.0000000000000001377 92.0
PJD1_k127_2612725_0 Peptidase family M48 K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 383.0
PJD1_k127_2612725_1 SMART Mov34 MPN PAD-1 family protein K21140 - 3.13.1.6 0.000000000000000006609 86.0
PJD1_k127_2612725_2 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 0.000000000008495 73.0
PJD1_k127_2624163_0 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 509.0
PJD1_k127_2624163_1 Protein of unknown function (DUF2845) - - - 0.0002392 47.0
PJD1_k127_26303_0 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005435 263.0
PJD1_k127_26303_1 Glyoxalase-like domain K07032 - - 0.000000000000000000000000000000000000000000000000000000000000000001603 228.0
PJD1_k127_26303_2 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00000000000000000000000000000000000000000000000009813 180.0
PJD1_k127_26303_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000002286 147.0
PJD1_k127_2637779_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1025.0
PJD1_k127_26542_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006273 501.0
PJD1_k127_2680263_0 Putative undecaprenyl diphosphate synthase K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 357.0
PJD1_k127_2680263_1 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 312.0
PJD1_k127_2680263_2 CsbD-like - - - 0.00000000000000009005 81.0
PJD1_k127_2693984_0 Membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 469.0
PJD1_k127_2693984_1 Transcriptional regulator - - - 0.000000000000000000000000000003522 123.0
PJD1_k127_2693984_2 - - - - 0.000000000000000000008899 95.0
PJD1_k127_2693984_3 methyltransferase - - - 0.0000004852 53.0
PJD1_k127_269426_0 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 515.0
PJD1_k127_269426_1 Protein of unknown function (DUF4255) - - - 0.0000000000000000000000000000000000000001669 156.0
PJD1_k127_2716485_0 PLD-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 556.0
PJD1_k127_2716485_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 346.0
PJD1_k127_2716485_2 DegT/DnrJ/EryC1/StrS aminotransferase family K14260 - 2.6.1.2,2.6.1.66 0.00000000000000000000000000000000000000000000001179 183.0
PJD1_k127_2745817_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 9.933e-198 636.0
PJD1_k127_2745817_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 488.0
PJD1_k127_2745817_2 Protein of unknown function (DUF3124) - - - 0.0000000000000000000000000000000000000000001531 165.0
PJD1_k127_2745817_3 Peptidoglycan-binding domain 1 protein - - - 0.000002092 49.0
PJD1_k127_2749061_0 Belongs to the glycosyl hydrolase 57 family - - - 0.0 1111.0
PJD1_k127_2749061_1 ABC transporter K06020 - 3.6.3.25 3.223e-313 964.0
PJD1_k127_2749061_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 590.0
PJD1_k127_2749061_3 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 423.0
PJD1_k127_2749061_4 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000005916 184.0
PJD1_k127_2749061_5 Tetratricopeptide repeat - - - 0.000000001048 68.0
PJD1_k127_2754011_0 hmm pf01609 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 460.0
PJD1_k127_2754011_1 NADPH-dependent FMN reductase K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003744 266.0
PJD1_k127_2754011_2 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000004215 126.0
PJD1_k127_2754011_3 - - - - 0.000000000000002083 79.0
PJD1_k127_2866595_0 L,D-transpeptidase catalytic domain K16291 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 319.0
PJD1_k127_2866595_1 Alanine-zipper, major outer membrane lipoprotein - - - 0.0000000000004392 73.0
PJD1_k127_2866595_2 L,D-transpeptidase catalytic domain - - - 0.000000005031 60.0
PJD1_k127_297605_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 2.288e-201 632.0
PJD1_k127_297605_1 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 455.0
PJD1_k127_297605_2 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004021 452.0
PJD1_k127_297605_3 PFAM Class II aldolase K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 349.0
PJD1_k127_297605_4 DUF218 domain - - - 0.0000000000000007342 85.0
PJD1_k127_2984141_0 response to heat K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004339 469.0
PJD1_k127_2984141_1 response to heat K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 441.0
PJD1_k127_2984141_2 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003095 247.0
PJD1_k127_2984141_3 - - - - 0.0000000000000000000000000000000000000000000000002027 179.0
PJD1_k127_2984141_4 UTRA K03710 - - 0.0000000000000000000000000000000000565 143.0
PJD1_k127_2984141_5 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.0000000000000000000000006451 109.0
PJD1_k127_2984141_6 Universal stress protein - - - 0.000000000000000001159 91.0
PJD1_k127_2985566_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 571.0
PJD1_k127_2985566_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 357.0
PJD1_k127_2985566_2 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008137 352.0
PJD1_k127_2985566_3 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 342.0
PJD1_k127_2985566_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008166 292.0
PJD1_k127_2985566_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000003837 228.0
PJD1_k127_2985566_6 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.000000000000000000000000000000000000000000000000000002756 199.0
PJD1_k127_2985566_7 Lipoate-protein ligase K03800 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 6.3.1.20 0.000000000000000000000000000000000000000000002102 174.0
PJD1_k127_2985566_8 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000000000000000002726 128.0
PJD1_k127_2985566_9 SEC-C Motif Domain Protein - - - 0.00000000001052 66.0
PJD1_k127_3061229_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 596.0
PJD1_k127_3061229_1 Transport of potassium into the cell K03549 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 310.0
PJD1_k127_3061229_2 Protein of unknown function (DUF1318) - - - 0.000000000000000000000000000000000000000005498 162.0
PJD1_k127_3061229_3 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000001376 121.0
PJD1_k127_30662_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 556.0
PJD1_k127_30662_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007579 514.0
PJD1_k127_30662_10 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 331.0
PJD1_k127_30662_11 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000004582 262.0
PJD1_k127_30662_12 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000007227 238.0
PJD1_k127_30662_13 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K03386 - 1.11.1.15 0.00000000000000000000001855 108.0
PJD1_k127_30662_14 Cell division protein FtsQ K03589 - - 0.00000000000008221 81.0
PJD1_k127_30662_2 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009298 503.0
PJD1_k127_30662_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 447.0
PJD1_k127_30662_4 Cell cycle protein K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 400.0
PJD1_k127_30662_5 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 400.0
PJD1_k127_30662_6 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005808 395.0
PJD1_k127_30662_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 387.0
PJD1_k127_30662_8 Cell wall formation K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009317 375.0
PJD1_k127_30662_9 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004239 369.0
PJD1_k127_308205_0 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity K11779,K11780,K11781,K11784,K18285 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044249,GO:0044689,GO:0051186,GO:0051188 1.21.98.1,2.5.1.120,2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008409 472.0
PJD1_k127_308205_1 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity K11779,K11780,K11781,K11784,K18285 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044249,GO:0044689,GO:0051186,GO:0051188 1.21.98.1,2.5.1.120,2.5.1.77 0.00000000000000000000000000000000000000000000000000000000001643 213.0
PJD1_k127_3116598_0 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 323.0
PJD1_k127_3116598_1 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000134 243.0
PJD1_k127_3116598_2 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000007982 190.0
PJD1_k127_3116598_3 PFAM CBS domain - - - 0.000000000000000000000000000000000000001689 153.0
PJD1_k127_3116598_4 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000002885 119.0
PJD1_k127_3140159_0 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.00000000000000000000000000000000000007805 160.0
PJD1_k127_3174384_0 Sensor histidine kinase, HAMP domain-containing - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007506 582.0
PJD1_k127_3174384_1 Chitobiase/beta-hexosaminidase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007999 547.0
PJD1_k127_3186789_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 4.622e-217 695.0
PJD1_k127_3186789_1 Putative endonuclease, protein of unknown function (DUF1780) - - - 0.000000000000000000463 94.0
PJD1_k127_3186789_3 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000003902 57.0
PJD1_k127_3186789_4 Universal stress protein family - - - 0.00000008868 62.0
PJD1_k127_3206688_0 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 525.0
PJD1_k127_3206688_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001073 265.0
PJD1_k127_3206688_2 PLD-like domain - - - 0.000000000000000000000000000000000000000000001065 169.0
PJD1_k127_3209537_0 Histidine kinase - - - 6.124e-199 660.0
PJD1_k127_3209537_1 Histidine kinase K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 559.0
PJD1_k127_3209537_10 - - - - 0.0000000000000000009833 93.0
PJD1_k127_3209537_11 COG0642 Signal transduction histidine kinase - - - 0.000000000001028 79.0
PJD1_k127_3209537_12 OmpA family K02557 - - 0.000001113 59.0
PJD1_k127_3209537_13 helix_turn_helix, arabinose operon control protein - - - 0.0001967 53.0
PJD1_k127_3209537_2 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 303.0
PJD1_k127_3209537_3 galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000001548 183.0
PJD1_k127_3209537_4 Glycine-zipper domain - - - 0.0000000000000000000000000000000000000000001508 169.0
PJD1_k127_3209537_5 Universal stress protein family - - - 0.000000000000000000000000000000000000000008732 158.0
PJD1_k127_3209537_6 energy transducer activity K03832 - - 0.00000000000000000000000000000000000003368 154.0
PJD1_k127_3209537_7 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000000000000000000002903 143.0
PJD1_k127_3209537_8 proteolysis K03665 - - 0.000000000000000000000000000003886 125.0
PJD1_k127_3209537_9 - - - - 0.0000000000000000000000002149 107.0
PJD1_k127_3210600_0 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008577 430.0
PJD1_k127_3210600_1 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 295.0
PJD1_k127_3210600_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000000000007237 190.0
PJD1_k127_3210600_3 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000005203 174.0
PJD1_k127_3210600_4 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000005927 159.0
PJD1_k127_3210600_5 Domain of unknown function (DUF4388) - - - 0.000000000000000000000000000000000000001322 163.0
PJD1_k127_3210600_6 tetratricopeptide repeat - - - 0.000004739 59.0
PJD1_k127_3210673_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 2.533e-275 856.0
PJD1_k127_3210673_1 Belongs to the alpha-IPM synthase homocitrate synthase family K02594 - 2.3.3.14 4.362e-227 709.0
PJD1_k127_3210673_10 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000000000003304 91.0
PJD1_k127_3210673_11 mercury ion transmembrane transporter activity K07213 - - 0.000000000000006144 76.0
PJD1_k127_3210673_2 B3/4 domain K01890 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006539 614.0
PJD1_k127_3210673_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 473.0
PJD1_k127_3210673_4 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006999 325.0
PJD1_k127_3210673_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000001392 234.0
PJD1_k127_3210673_6 Histidine kinase K02482,K03557 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000002232 217.0
PJD1_k127_3210673_7 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000001336 187.0
PJD1_k127_3210673_8 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000026 153.0
PJD1_k127_3210673_9 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000000005464 123.0
PJD1_k127_3212332_0 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 - 1.6.5.3 1.233e-252 792.0
PJD1_k127_3212332_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 4.899e-229 721.0
PJD1_k127_3212332_2 molybdopterin oxidoreductase Fe4S4 region K05299 - 1.17.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 512.0
PJD1_k127_3212332_3 MgsA AAA+ ATPase C terminal K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 506.0
PJD1_k127_3212332_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 304.0
PJD1_k127_3212332_5 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000004127 234.0
PJD1_k127_3212332_6 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000004431 200.0
PJD1_k127_3212332_7 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000001096 188.0
PJD1_k127_3212332_8 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000003902 145.0
PJD1_k127_3212332_9 Methyltransferase K08316 - 2.1.1.171 0.00000000000000000000000000000004263 134.0
PJD1_k127_3224569_0 Catalyzes the conversion of dihydroorotate to orotate with NAD( ) as electron acceptor K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005273 381.0
PJD1_k127_3224569_1 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000000000000000000648 233.0
PJD1_k127_3224569_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000001248 222.0
PJD1_k127_3224569_3 Dihydroorotate dehydrogenase electron transfer subunit K02823 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016645,GO:0016646,GO:0042602,GO:0052875,GO:0055114 - 0.00000000000000000000000000000000000000000000000000002899 196.0
PJD1_k127_3224569_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000003432 154.0
PJD1_k127_3231248_0 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000003879 233.0
PJD1_k127_3231248_1 cyclic nucleotide binding K10914 - - 0.000000000000000000001263 98.0
PJD1_k127_3232231_0 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 606.0
PJD1_k127_3232231_1 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007349 371.0
PJD1_k127_3232231_2 LysM domain K01449,K19223 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000004105 243.0
PJD1_k127_3232231_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000006331 232.0
PJD1_k127_3232231_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000001691 196.0
PJD1_k127_3232231_5 Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.000000000000000000000000000006176 125.0
PJD1_k127_3232231_6 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000001301 80.0
PJD1_k127_3232231_7 NusG domain II K00805 - 2.5.1.30 0.0000000000000002613 84.0
PJD1_k127_3232231_8 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000001386 74.0
PJD1_k127_3232449_0 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 377.0
PJD1_k127_3232449_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 344.0
PJD1_k127_3232449_2 Psort location Cytoplasmic, score 8.96 K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003936 269.0
PJD1_k127_3232449_3 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000003383 196.0
PJD1_k127_3234579_0 Pas domain s-box - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001526 284.0
PJD1_k127_3234579_1 Domains HAMP, HisKA, HATPase_c, REC K02030 - - 0.00000000000000000000000000000008845 145.0
PJD1_k127_3239589_0 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000307 210.0
PJD1_k127_3239589_1 Family 2 K20534 - - 0.0000000000000000000000000000000001285 138.0
PJD1_k127_32447_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1572.0
PJD1_k127_32447_1 PFAM phosphofructokinase K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000002672 218.0
PJD1_k127_3259493_0 histidine kinase, HAMP K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004757 357.0
PJD1_k127_3259493_1 response regulator K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001374 258.0
PJD1_k127_3259493_10 phosphorelay signal transduction system K02437 - - 0.000000000000000000000000000505 123.0
PJD1_k127_3259493_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000002927 68.0
PJD1_k127_3259493_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00008328 46.0
PJD1_k127_3259493_2 two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000004362 237.0
PJD1_k127_3259493_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000002999 215.0
PJD1_k127_3259493_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000005216 204.0
PJD1_k127_3259493_5 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K18330 - 1.12.1.3 0.000000000000000000000000000000000000000000000005131 184.0
PJD1_k127_3259493_6 Ferredoxin K17992 - 1.12.1.3 0.000000000000000000000000000000000000006765 150.0
PJD1_k127_3259493_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000002363 147.0
PJD1_k127_3259493_8 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335,K00355,K18331 - 1.12.1.3,1.6.5.2,1.6.5.3 0.0000000000000000000000000000000001356 134.0
PJD1_k127_3259493_9 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000014 122.0
PJD1_k127_3259964_0 DNA polymerase K02347 - - 1.98e-213 676.0
PJD1_k127_3259964_1 Nitrogen regulatory protein P-II K02590 - - 0.00000000000000000000000000000000000000000000000000000002372 199.0
PJD1_k127_3259964_2 Nitrogen regulatory protein P-II K02589 - - 0.000000000000000000000000000000000000000000000000001609 183.0
PJD1_k127_3259964_3 Dinitrogenase iron-molybdenum cofactor K02596 - - 0.000000000000000000000000000000000000000000007414 166.0
PJD1_k127_3259964_4 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000009879 129.0
PJD1_k127_3261763_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 6.459e-237 741.0
PJD1_k127_3261763_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 5.487e-233 728.0
PJD1_k127_3261763_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 460.0
PJD1_k127_3261763_3 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 351.0
PJD1_k127_3261763_4 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 311.0
PJD1_k127_3261763_5 Arginyl tRNA synthetase N terminal dom K01887 - 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000005995 227.0
PJD1_k127_3261763_6 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000002331 118.0
PJD1_k127_3278783_0 Probable molybdopterin binding domain K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008582 387.0
PJD1_k127_3278783_1 COG0223 Methionyl-tRNA formyltransferase - - - 0.000000000000000000000000000000001006 141.0
PJD1_k127_3278783_2 Polysaccharide deacetylase K11931 - - 0.0000006759 59.0
PJD1_k127_3294403_0 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 605.0
PJD1_k127_3294403_1 Type II secretion system (T2SS), protein F K02455,K02653 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0032940,GO:0033036,GO:0042886,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098776 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 329.0
PJD1_k127_3294403_2 metallopeptidase activity K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007722 246.0
PJD1_k127_3294403_3 PFAM type II secretion system protein G K02456 - - 0.0000000000000000000000000000000000000000000000002531 180.0
PJD1_k127_3294403_4 type IV pilus modification protein PilV K02458 - - 0.0000005113 57.0
PJD1_k127_3294403_5 general secretion pathway protein K02457 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0009509 49.0
PJD1_k127_3298312_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 335.0
PJD1_k127_3298312_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004163 295.0
PJD1_k127_3300078_0 Lecithin:cholesterol acyltransferase - - - 1.413e-239 775.0
PJD1_k127_3300078_1 Clostripain family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006827 462.0
PJD1_k127_3300078_10 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00005736 46.0
PJD1_k127_3300078_11 Esterase of the alpha-beta hydrolase superfamily - - - 0.0004591 45.0
PJD1_k127_3300078_2 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 414.0
PJD1_k127_3300078_3 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 405.0
PJD1_k127_3300078_4 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 375.0
PJD1_k127_3300078_5 Belongs to the acetyltransferase family. ArgA subfamily K00619,K14681 GO:0003674,GO:0003824,GO:0004042,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016043,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0040007,GO:0042450,GO:0042802,GO:0042803,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000002878 236.0
PJD1_k127_3300078_6 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000003391 205.0
PJD1_k127_3300078_7 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000007752 160.0
PJD1_k127_3300078_8 Pyrophosphatase K02428 - 3.6.1.66 0.000000000000000000000000000000000000001149 151.0
PJD1_k127_3300078_9 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000001165 135.0
PJD1_k127_3300173_0 Homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009547 451.0
PJD1_k127_3300173_1 ThiF family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005031 370.0
PJD1_k127_3300173_2 JAB/MPN domain K21140 - 3.13.1.6 0.00000000000000000004171 93.0
PJD1_k127_3300173_3 sulfur carrier activity - - - 0.00000000000000000007515 91.0
PJD1_k127_330498_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 471.0
PJD1_k127_330498_1 Glutamine amidotransferase class-I - - - 0.0000000000000000000000000000000000000000000000000000000000000003237 228.0
PJD1_k127_330498_2 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000000000001127 190.0
PJD1_k127_3319590_0 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007174 368.0
PJD1_k127_3319590_1 - - - - 0.00000000000001428 81.0
PJD1_k127_3339834_0 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit - - - 2.893e-219 698.0
PJD1_k127_3339834_1 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000005909 205.0
PJD1_k127_33400_0 Domain in cystathionine beta-synthase and other proteins. K07182 - - 9.903e-234 740.0
PJD1_k127_33400_1 Sigma-54 interaction domain K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008 457.0
PJD1_k127_33400_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004024 254.0
PJD1_k127_33400_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000349 136.0
PJD1_k127_3390151_0 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 433.0
PJD1_k127_3390151_1 PFAM NADH ubiquinone oxidoreductase complex I intermediate-associated protein 30 - - - 0.000000000000000000000000000000000000000005013 159.0
PJD1_k127_3390151_2 PAS domain K09155 - - 0.0000000000000158 73.0
PJD1_k127_3390151_3 - - - - 0.000000002502 64.0
PJD1_k127_3390151_4 - - - - 0.000000009497 59.0
PJD1_k127_3406555_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 434.0
PJD1_k127_3406555_1 ABC transporter substrate binding protein K01989,K05832 - - 0.00000000000000000000000000000001051 139.0
PJD1_k127_3406555_2 Sulfatase-modifying factor enzyme 1 K01176,K01206,K01218,K01219,K01224 - 3.2.1.1,3.2.1.51,3.2.1.78,3.2.1.81,3.2.1.89 0.00000000000000003105 98.0
PJD1_k127_3406555_3 Parallel beta-helix repeats - - - 0.0000000000002058 85.0
PJD1_k127_3406555_4 self proteolysis - - - 0.0000000000002744 85.0
PJD1_k127_3406555_5 PA14 - - - 0.0000000001543 76.0
PJD1_k127_3406555_6 PFAM UvrB UvrC protein K08999,K19405,K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 2.7.14.1 0.000005191 61.0
PJD1_k127_3425865_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 321.0
PJD1_k127_3425865_1 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 322.0
PJD1_k127_3425865_2 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.000000000000000000503 89.0
PJD1_k127_3425865_3 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000001812 89.0
PJD1_k127_3425865_4 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000003858 86.0
PJD1_k127_3435674_0 GAF domain K02584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 396.0
PJD1_k127_3435674_1 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001232 243.0
PJD1_k127_34583_0 copper-translocating P-type ATPase K17686 - 3.6.3.54 0.0 1017.0
PJD1_k127_34583_1 Multicopper oxidase - - - 4.404e-254 805.0
PJD1_k127_34583_2 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) - - - 0.0000000000000000000000000000000000000000000002098 176.0
PJD1_k127_34583_3 - - - - 0.00000000000000000000000000000000000003008 145.0
PJD1_k127_34583_4 Copper resistance protein CopZ K07213 - - 0.0000001103 57.0
PJD1_k127_34583_5 Protein of unknown function with PCYCGC motif - - - 0.0003847 46.0
PJD1_k127_34724_0 PFAM Acetyl-CoA hydrolase transferase K18122 - - 4.188e-300 930.0
PJD1_k127_34724_1 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 323.0
PJD1_k127_34724_2 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000009616 207.0
PJD1_k127_34724_3 Transposase for insertion sequence element - - - 0.000000000000000000000002649 107.0
PJD1_k127_34724_4 COGs COG1801 conserved - - - 0.00000000008382 65.0
PJD1_k127_348437_0 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 489.0
PJD1_k127_348437_1 PFAM ATP adenylyltransferase K00988 - 2.7.7.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 354.0
PJD1_k127_348437_2 AsmA-like C-terminal region K07289 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008468 314.0
PJD1_k127_348437_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000009194 254.0
PJD1_k127_348437_4 Methylates ribosomal protein L11 K02687 - - 0.00000000000000000000000000000000000000000000006035 179.0
PJD1_k127_348437_5 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000000000000000000000002141 112.0
PJD1_k127_348437_6 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000002236 102.0
PJD1_k127_348437_7 - - - - 0.0000000000000000002341 95.0
PJD1_k127_348437_8 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000002401 80.0
PJD1_k127_34951_0 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 282.0
PJD1_k127_34951_1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000109 235.0
PJD1_k127_34951_2 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000002835 164.0
PJD1_k127_3541417_0 3'(2'),5'-bisphosphate nucleotidase activity K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007726 338.0
PJD1_k127_3541417_1 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000007577 264.0
PJD1_k127_3541417_2 Hemerythrin HHE cation binding domain K07216 - - 0.000000000009521 66.0
PJD1_k127_354421_0 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007024 251.0
PJD1_k127_354421_1 manually curated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005588 247.0
PJD1_k127_354421_2 Domain of unknown function DUF302 - - - 0.0000000000000000972 80.0
PJD1_k127_3558058_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 537.0
PJD1_k127_3558058_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000005051 192.0
PJD1_k127_3558058_2 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000765 89.0
PJD1_k127_3589827_0 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007076 415.0
PJD1_k127_3589827_1 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000007989 133.0
PJD1_k127_3589827_2 Protein of unknown function DUF86 - - - 0.00000000000000000000000000001574 121.0
PJD1_k127_3589827_3 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.00000000000000000000000009614 109.0
PJD1_k127_3589827_4 DNA polymerase beta domain protein region K07075 - - 0.0000000000000000000000286 101.0
PJD1_k127_3622274_0 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000001092 162.0
PJD1_k127_3622274_3 - - - - 0.0004035 45.0
PJD1_k127_3672841_0 PFAM Integrase catalytic region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007313 455.0
PJD1_k127_3672841_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.00000000000000000000000000000000000000000000000000000006208 201.0
PJD1_k127_3672841_2 DeoR-like helix-turn-helix domain - - - 0.0000000000000000000000000000000007312 138.0
PJD1_k127_3701010_0 PFAM MgtC SapB transporter K07507 - - 0.000000000000000000000000000000000000000006581 158.0
PJD1_k127_3701010_1 - - - - 0.0000000000000006732 80.0
PJD1_k127_3717559_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 356.0
PJD1_k127_3717559_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000001563 187.0
PJD1_k127_3717559_2 PFAM Peptidase M23 - - - 0.00000000000000000000000000000000000000004929 164.0
PJD1_k127_3718680_0 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000417 275.0
PJD1_k127_3718680_1 AIR synthase related protein, N-terminal domain K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000075 188.0
PJD1_k127_3718680_2 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000004361 108.0
PJD1_k127_3737693_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182,K16239,K16874 - 4.1.1.61,4.1.1.98 1.372e-209 662.0
PJD1_k127_3737693_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 566.0
PJD1_k127_3737693_2 Pyridoxal-phosphate dependent enzyme K01738,K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008018 415.0
PJD1_k127_3737693_3 1,4-alpha-glucan branching enzyme activity K00700,K01236 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0071704,GO:1901576 2.4.1.18,3.2.1.141 0.00000000000000000000000000000000000000000000000000000000000000002362 226.0
PJD1_k127_3737693_4 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000002342 126.0
PJD1_k127_3737693_5 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000002139 113.0
PJD1_k127_3737693_6 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000000000000001922 109.0
PJD1_k127_3737693_7 Evidence 4 Homologs of previously reported genes of - - - 0.000000000001625 69.0
PJD1_k127_3761557_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 426.0
PJD1_k127_3761557_1 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 389.0
PJD1_k127_3761557_2 Phospholipase D. Active site motifs. K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006146 280.0
PJD1_k127_3761557_3 Zinc dependent phospholipase C - - - 0.00000000000000000000000000000000000000000000000008308 188.0
PJD1_k127_3761557_4 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 - - 0.00000000000000000000000001732 111.0
PJD1_k127_3761557_5 Molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.00000000000000000000001203 104.0
PJD1_k127_3817121_0 Endoribonuclease that initiates mRNA decay K18682 - - 9.511e-208 659.0
PJD1_k127_3817121_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02652 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007878 533.0
PJD1_k127_3817121_10 Hydrogenase maturation protease K03605 - - 0.00000000000000000000003762 102.0
PJD1_k127_3817121_11 carbon dioxide binding K04653 - - 0.0000000000000000000001054 99.0
PJD1_k127_3817121_12 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000000006991 87.0
PJD1_k127_3817121_13 Pilus assembly protein K02461,K02662,K02663,K12288 GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.00002772 56.0
PJD1_k127_3817121_2 YmdB-like protein K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 336.0
PJD1_k127_3817121_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 340.0
PJD1_k127_3817121_4 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 330.0
PJD1_k127_3817121_5 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004514 302.0
PJD1_k127_3817121_6 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004468 272.0
PJD1_k127_3817121_7 Bacterial type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000001769 161.0
PJD1_k127_3817121_8 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000007121 137.0
PJD1_k127_3817121_9 Type II secretion system (T2SS), protein K K02460 - - 0.00000000000000000000000002036 121.0
PJD1_k127_3853609_0 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 443.0
PJD1_k127_3853609_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000138 286.0
PJD1_k127_3853609_2 SMART Signal transduction response regulator, receiver domain - - - 0.0000000000000000000000000000000000000000000004386 183.0
PJD1_k127_3853609_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000005071 158.0
PJD1_k127_3853609_4 UV-endonuclease UvdE - - - 0.000000000000000000000004061 102.0
PJD1_k127_3962942_0 Aminotransferase class I and II K10206 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 569.0
PJD1_k127_3962942_1 Branched-chain amino acid transport system / permease component K01997 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0043090,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0089718,GO:0098655,GO:0098656,GO:0098657,GO:0098713,GO:0098739,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.000000000000000000000000000000000000001559 152.0
PJD1_k127_3962942_2 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000001049 141.0
PJD1_k127_3963337_0 Belongs to the GPI family K01810 - 5.3.1.9 5.814e-272 845.0
PJD1_k127_3963337_1 cell redox homeostasis - - - 2.752e-227 712.0
PJD1_k127_3963337_2 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 319.0
PJD1_k127_3963337_3 Glycosyl hydrolase family 63 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 311.0
PJD1_k127_3963337_4 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 303.0
PJD1_k127_3963337_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008045 289.0
PJD1_k127_3963337_6 Membrane-associated sensor domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004596 274.0
PJD1_k127_3963337_7 Protein of unknown function (DUF3047) - - - 0.0000000000000000000000000000002421 124.0
PJD1_k127_3974530_0 alginic acid biosynthetic process - - - 3.508e-234 743.0
PJD1_k127_3974530_1 Multicopper oxidase K00368,K07233,K22349 - 1.16.3.3,1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000004108 245.0
PJD1_k127_3974530_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000003666 211.0
PJD1_k127_3977691_0 SMART AAA ATPase K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 556.0
PJD1_k127_3978232_0 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 357.0
PJD1_k127_3978232_1 PFAM D-aminoacylase K01465,K06015 - 3.5.1.81,3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 357.0
PJD1_k127_3978232_2 iron-sulfur cluster assembly - - - 0.0000000000000000000000002072 106.0
PJD1_k127_3978232_3 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16783,K16785 - - 0.0000000000000002263 87.0
PJD1_k127_3978232_4 N-Acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.000000000000003212 76.0
PJD1_k127_3984719_0 Tail protein - - - 0.00000000000000000000000000000000000000000000000000000000000002368 239.0
PJD1_k127_3984719_1 ATPase involved in DNA repair - - - 0.00000000000000000000000000000000000000000000000000001478 206.0
PJD1_k127_3984719_2 domain, Protein K15125 - - 0.000000000000000000000001433 118.0
PJD1_k127_3984719_3 Tail protein - - - 0.00000000000000000000004229 109.0
PJD1_k127_3984784_0 PFAM magnesium chelatase ChlI subunit K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 475.0
PJD1_k127_3984784_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000001437 229.0
PJD1_k127_3984784_2 sequence-specific DNA binding K18830 - - 0.0000000000000000000000000000000000002253 143.0
PJD1_k127_3984784_4 Regulatory protein, FmdB family - - - 0.000000000000000000002878 94.0
PJD1_k127_4001753_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 574.0
PJD1_k127_4010450_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 3.986e-199 638.0
PJD1_k127_4010450_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 355.0
PJD1_k127_4010450_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003313 279.0
PJD1_k127_4010450_3 - - - - 0.000000000000001719 81.0
PJD1_k127_4010450_5 PFAM VanZ family protein - - - 0.000000001953 63.0
PJD1_k127_4011530_0 Dehydratase family K01687 - 4.2.1.9 2.04e-266 828.0
PJD1_k127_4011530_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004068 302.0
PJD1_k127_4011530_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000007812 254.0
PJD1_k127_4011530_3 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000007059 103.0
PJD1_k127_4011530_4 Protein of unknown function (DUF465) K09794 - - 0.0000000000000000006171 88.0
PJD1_k127_4012415_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000003127 183.0
PJD1_k127_4012415_1 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000001699 155.0
PJD1_k127_4012415_2 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000006938 136.0
PJD1_k127_4012415_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000006304 86.0
PJD1_k127_4015754_0 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 314.0
PJD1_k127_4015754_1 nickel cation binding K04651,K19640 - - 0.0000000000000000000000000000002124 127.0
PJD1_k127_4015754_2 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000001044 113.0
PJD1_k127_4015754_3 S1 domain K00243 - - 0.000000000000000005249 85.0
PJD1_k127_4015953_0 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00123,K00336,K05299,K06441 - 1.12.7.2,1.17.1.10,1.17.1.9,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 395.0
PJD1_k127_4015953_1 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006762 246.0
PJD1_k127_40182_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 514.0
PJD1_k127_40182_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009086 337.0
PJD1_k127_40182_2 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 324.0
PJD1_k127_40182_3 PFAM Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002543 269.0
PJD1_k127_40182_4 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000007523 243.0
PJD1_k127_40182_5 DsrC like protein K11179 - - 0.000000000000000000000000001352 117.0
PJD1_k127_40250_0 Sigma-54 interaction domain K02481,K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000583 429.0
PJD1_k127_40250_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000001003 265.0
PJD1_k127_40250_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K14080 - 2.1.1.246,4.1.1.37 0.00000000000000000000000000000000000000000000000000000000001101 214.0
PJD1_k127_40250_4 OsmC-like protein - - - 0.000000000000000003452 92.0
PJD1_k127_40250_5 DegT/DnrJ/EryC1/StrS aminotransferase family K14260 - 2.6.1.2,2.6.1.66 0.000000000000001447 81.0
PJD1_k127_40250_6 Carbohydrate/starch-binding module (family 21) - - - 0.00000001848 64.0
PJD1_k127_40250_7 response regulator - - - 0.00007388 50.0
PJD1_k127_4035374_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 584.0
PJD1_k127_4035374_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 410.0
PJD1_k127_4035374_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001108 297.0
PJD1_k127_4035374_3 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.0000000000000001278 83.0
PJD1_k127_4040505_0 DHHA2 domain K15986 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005955 579.0
PJD1_k127_4040505_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 462.0
PJD1_k127_4040505_2 - - - - 0.000000000000000000000001486 104.0
PJD1_k127_4040505_3 cyclic nucleotide binding K10914 - - 0.0000000000000002151 82.0
PJD1_k127_4045899_0 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002912 261.0
PJD1_k127_4045899_1 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000005169 235.0
PJD1_k127_40475_0 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000005278 233.0
PJD1_k127_40475_1 O-methyltransferase family 3 - - - 0.00000000000000000000000000000000000000000000000000000000003741 214.0
PJD1_k127_40475_2 UPF0126 domain - - - 0.0000000000000000000000000000000000000000000000000000301 192.0
PJD1_k127_40475_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00007884 45.0
PJD1_k127_4056757_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 3.787e-290 901.0
PJD1_k127_4056757_1 PFAM Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000384 518.0
PJD1_k127_4056757_2 response regulator - - - 0.0000000000000000000000000000000000001064 154.0
PJD1_k127_4056757_3 Zinc ribbon domain - - - 0.0000008214 53.0
PJD1_k127_4070126_0 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 424.0
PJD1_k127_4070126_1 Transcriptional regulatory protein, C terminal K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 301.0
PJD1_k127_4070126_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000000000000000000000000000000002429 178.0
PJD1_k127_4070126_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000004684 163.0
PJD1_k127_4070126_4 Histidine kinase K07636 - 2.7.13.3 0.0000000004131 65.0
PJD1_k127_4084749_0 B12 binding domain K04034 - 1.21.98.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 309.0
PJD1_k127_4084749_1 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000007935 146.0
PJD1_k127_4084749_2 phosphoribosylformylglycinamidine synthase activity K01952 GO:0003674,GO:0003824,GO:0004642,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0032502,GO:0034641,GO:0034654,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0048856,GO:0055086,GO:0060322,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097065,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.5.3 0.0000000000000000000000000000000006965 130.0
PJD1_k127_4106252_0 Sulphur transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 329.0
PJD1_k127_4106252_1 Belongs to the sulfur carrier protein TusA family - - - 0.00000000000000000000000002453 110.0
PJD1_k127_4117164_0 Deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 347.0
PJD1_k127_4117164_1 Belongs to the arginase family K01480 - 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 308.0
PJD1_k127_4117164_2 Belongs to the PdaD family K02626 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001643 277.0
PJD1_k127_4117164_3 binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004854 271.0
PJD1_k127_4117164_4 Protein of unknown function (DUF2934) - - - 0.00005964 49.0
PJD1_k127_4122896_0 L-glutamate biosynthetic process - - - 1.439e-195 614.0
PJD1_k127_4122896_1 Belongs to the glutamate synthase family K00265 - 1.4.1.13,1.4.1.14 0.0000000000000000000473 94.0
PJD1_k127_4128687_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 428.0
PJD1_k127_4128687_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 405.0
PJD1_k127_4128687_10 PFAM Rhodanese domain protein - - - 0.000000004029 64.0
PJD1_k127_4128687_12 PFAM adenylate cyclase K05873 - 4.6.1.1 0.0001472 51.0
PJD1_k127_4128687_2 calcium, potassium:sodium antiporter activity K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 368.0
PJD1_k127_4128687_3 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000001005 271.0
PJD1_k127_4128687_4 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000009216 200.0
PJD1_k127_4128687_5 AMP binding - - - 0.00000000000000000000000000000000000000000001572 173.0
PJD1_k127_4128687_6 Transcriptional regulator - - - 0.00000000000000000000000000000000000003776 153.0
PJD1_k127_4128687_7 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000001876 128.0
PJD1_k127_4128687_8 Tetratricopeptide repeat - - - 0.0000000000000000007755 95.0
PJD1_k127_4128687_9 - - - - 0.000000000000000001483 88.0
PJD1_k127_412934_0 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 409.0
PJD1_k127_412934_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000724 216.0
PJD1_k127_412934_2 electron transfer activity K05337,K17247 - - 0.00000000000000000000002276 100.0
PJD1_k127_412934_3 Rubredoxin - - - 0.00000000000000000000004475 100.0
PJD1_k127_412934_4 Protein of unknown function, DUF488 - - - 0.000000001043 59.0
PJD1_k127_4136470_0 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis protein - - - 0.00000000000000000000000000000000000000000003284 164.0
PJD1_k127_4136470_1 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K07025 - - 0.0000000000000000000000000000000000009226 143.0
PJD1_k127_4136470_2 Protein of unknown function DUF134 - - - 0.00000000000000000000000000005311 118.0
PJD1_k127_4136470_3 - - - - 0.00000000007634 64.0
PJD1_k127_4136470_4 PFAM DsrE DsrF-like family - - - 0.0000000009616 64.0
PJD1_k127_4136470_5 Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP K01906 - 6.2.1.14 0.0000002214 57.0
PJD1_k127_4138398_0 alcohol dehydrogenase K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006262 431.0
PJD1_k127_4138398_1 PFAM ResB family protein K07399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 417.0
PJD1_k127_4138398_2 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 369.0
PJD1_k127_4138398_3 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000006069 144.0
PJD1_k127_4138398_4 Domains REC, sigma54 interaction, HTH8 - - - 0.00000000000000491 79.0
PJD1_k127_414547_0 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004419 291.0
PJD1_k127_4150216_0 Nitrogenase component 1 type Oxidoreductase K02587 - - 1.83e-216 690.0
PJD1_k127_4150216_1 Dinitrogenase iron-molybdenum cofactor - - - 0.00007463 45.0
PJD1_k127_4153792_0 toxin-antitoxin pair type II binding - - - 0.00000000000000000000003372 100.0
PJD1_k127_4153792_1 - - - - 0.000000000000006196 76.0
PJD1_k127_4171293_0 Glycosyl hydrolase family 63 C-terminal domain - - - 1.653e-208 657.0
PJD1_k127_4171293_1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00003753 54.0
PJD1_k127_4193785_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007644 537.0
PJD1_k127_4193785_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 438.0
PJD1_k127_4193785_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 354.0
PJD1_k127_4193785_3 Aconitase C-terminal domain K01681 - 4.2.1.3 0.0000000000000000000000000000000000008594 141.0
PJD1_k127_4193785_4 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.3 0.00000000000000000000000000000000001408 139.0
PJD1_k127_4203876_0 Putative MetA-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000002045 186.0
PJD1_k127_4203876_1 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000001195 169.0
PJD1_k127_4222217_0 hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 379.0
PJD1_k127_4222217_1 Hydrogenase formation hypA family K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002262 278.0
PJD1_k127_4222217_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000001211 166.0
PJD1_k127_4269725_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 489.0
PJD1_k127_4269725_1 zinc ion binding - - - 0.000000000000000000000000000000003092 132.0
PJD1_k127_4293706_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 396.0
PJD1_k127_4293706_1 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000003338 218.0
PJD1_k127_4293706_2 AMP binding - - - 0.00000000000000000000000000000000000000001728 156.0
PJD1_k127_4320761_0 Domain of unknown function (DUF1998) K02336,K06877 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 2.7.7.7 1.412e-223 713.0
PJD1_k127_4320761_1 PFAM ribonuclease II K01147 - 3.1.13.1 0.00000000000000000000000000000000000006121 143.0
PJD1_k127_4320761_2 COG0058 Glucan phosphorylase K00688 - 2.4.1.1 0.0003341 44.0
PJD1_k127_4320761_3 Putative diguanylate phosphodiesterase - - - 0.0006036 50.0
PJD1_k127_4384955_0 PFAM Integrase catalytic region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007007 461.0
PJD1_k127_4384955_1 cheY-homologous receiver domain - - - 0.00001512 48.0
PJD1_k127_4426282_0 Elongator protein 3, MiaB family, Radical SAM - - - 3.834e-194 617.0
PJD1_k127_4426282_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005831 229.0
PJD1_k127_4426282_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000001682 223.0
PJD1_k127_4426282_3 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.000000000000000000000000000000000000000000196 160.0
PJD1_k127_4426282_4 Putative prokaryotic signal transducing protein - - - 0.0005298 45.0
PJD1_k127_4450196_0 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 550.0
PJD1_k127_4450196_1 oligoendopeptidase F K08602 - - 0.000000000000000000000000000000000000000000000007986 181.0
PJD1_k127_44667_0 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000004776 229.0
PJD1_k127_44667_1 - - - - 0.00000000000000000000003584 104.0
PJD1_k127_44667_2 Belongs to the universal stress protein A family - - - 0.000000000000000007556 94.0
PJD1_k127_44667_3 - - - - 0.00000000002627 67.0
PJD1_k127_45347_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005026 582.0
PJD1_k127_45347_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008642 405.0
PJD1_k127_45347_2 Mur ligase, middle domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 358.0
PJD1_k127_45347_3 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000041 289.0
PJD1_k127_45347_4 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000636 304.0
PJD1_k127_45347_5 SEC-C Motif Domain Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004655 266.0
PJD1_k127_45347_6 Domain of unknown function (DUF3842) - - - 0.00000000000000000000000000000000000000000000000002666 182.0
PJD1_k127_45347_7 Adenylylsulphate kinase K00860 - 2.7.1.25 0.0000000000000000000000000000000000000000007021 162.0
PJD1_k127_45347_8 Predicted RNA-binding protein - - - 0.000000000000000000006408 94.0
PJD1_k127_4720_0 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000009302 234.0
PJD1_k127_4720_1 nucleotidyltransferase activity K07075 - - 0.00000000000000000000000003145 115.0
PJD1_k127_4720_2 Domain of unknown function (DUF1858) - - - 0.0000000002601 61.0
PJD1_k127_4720_3 - - - - 0.000003396 49.0
PJD1_k127_473070_0 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 509.0
PJD1_k127_473070_1 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 442.0
PJD1_k127_473070_2 nucleoside-triphosphate diphosphatase activity K06287 - - 0.0000000000000000000000000000000000000000000000001603 183.0
PJD1_k127_4764241_0 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 320.0
PJD1_k127_4764241_1 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000001484 115.0
PJD1_k127_4784027_0 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 347.0
PJD1_k127_4784027_1 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 305.0
PJD1_k127_4784027_2 Large-conductance mechanosensitive channel, MscL K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.000000001492 58.0
PJD1_k127_4785284_0 histidine kinase, HAMP K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004757 357.0
PJD1_k127_4785284_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000006091 146.0
PJD1_k127_4785284_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000004168 126.0
PJD1_k127_4785284_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000005501 69.0
PJD1_k127_4788077_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1208.0
PJD1_k127_4788077_1 GGDEF domain - - - 0.0002554 50.0
PJD1_k127_4795841_0 Protein of unknown function (DUF3300) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 379.0
PJD1_k127_4795841_1 Outer membrane protein transport protein, Ompp1 FadL TodX K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 362.0
PJD1_k127_4795841_2 MltA-interacting protein MipA K07274 - - 0.0000000000000000000000000000000000000000000000000000000000008016 219.0
PJD1_k127_4795841_3 Protein of unknown function (DUF2950) - - - 0.0000000000000000000000000007773 121.0
PJD1_k127_4818863_0 AAA domain - - - 3.124e-221 699.0
PJD1_k127_4818863_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000003216 248.0
PJD1_k127_4823817_0 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 512.0
PJD1_k127_4823817_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000003622 189.0
PJD1_k127_4823817_2 DnaJ molecular chaperone homology domain - - - 0.0000008499 57.0
PJD1_k127_4827001_0 AAA domain (Cdc48 subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007244 434.0
PJD1_k127_4827001_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002513 266.0
PJD1_k127_4827001_2 CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator - - - 0.000000000000000000000000000000000000000000000000000001598 206.0
PJD1_k127_4827001_3 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000002175 184.0
PJD1_k127_4827001_4 Roadblock LC7 K07131 - - 0.0000000000000000002777 100.0
PJD1_k127_4832629_0 PFAM Cytochrome b5 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006811 282.0
PJD1_k127_4832629_1 Protein of unknown function (DUF1460) - - - 0.000000000000000000000000000000000000000000000000004923 186.0
PJD1_k127_4832629_2 4Fe-4S binding domain - - - 0.00000000000000000000000000000006071 136.0
PJD1_k127_4840233_0 Ftsk_gamma K03466 - - 2.184e-202 662.0
PJD1_k127_4840233_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP) K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 287.0
PJD1_k127_4840233_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000001322 108.0
PJD1_k127_4840233_3 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000005758 66.0
PJD1_k127_4843241_0 PFAM phosphofructokinase K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 396.0
PJD1_k127_4843241_1 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003621 385.0
PJD1_k127_4843385_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004426 341.0
PJD1_k127_4843385_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000004053 118.0
PJD1_k127_4843385_2 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.000000000000000000000000001442 114.0
PJD1_k127_4843385_3 Putative RNA methylase family UPF0020 K07444,K12297 - 2.1.1.173,2.1.1.264 0.0006524 42.0
PJD1_k127_4859130_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000702 255.0
PJD1_k127_4859130_1 - - - - 0.000000000000001005 82.0
PJD1_k127_4862271_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000001627 150.0
PJD1_k127_4862271_1 PFAM peptidase U32 K08303 - - 0.00000000000000001095 87.0
PJD1_k127_4862271_2 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.0000000002865 72.0
PJD1_k127_4862271_3 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0005401 43.0
PJD1_k127_4875281_0 SMART Elongator protein 3 MiaB NifB K22226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006284 442.0
PJD1_k127_4875281_1 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006983 387.0
PJD1_k127_4875281_2 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000001778 154.0
PJD1_k127_487684_0 ribonuclease BN - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 288.0
PJD1_k127_487684_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002053 270.0
PJD1_k127_487684_2 Protein of unknown function (DUF4239) - - - 0.0000000000000000000000000000000001849 143.0
PJD1_k127_487935_0 NADH-quinone oxidoreductase subunit F K18005 - 1.12.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 598.0
PJD1_k127_487935_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 368.0
PJD1_k127_4882594_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000638 543.0
PJD1_k127_4882594_1 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000008657 226.0
PJD1_k127_4902755_0 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 372.0
PJD1_k127_4902755_1 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007885 285.0
PJD1_k127_4902755_2 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000001649 211.0
PJD1_k127_4902755_3 - - - - 0.00000000000000000000000000000002929 129.0
PJD1_k127_4902755_4 - - - - 0.00000000000000000000000000005189 122.0
PJD1_k127_4902755_5 - - - - 0.00000003189 61.0
PJD1_k127_4903254_0 phosphorelay signal transduction system K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 476.0
PJD1_k127_4903254_1 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 361.0
PJD1_k127_4903254_2 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000000000000000000000000001337 137.0
PJD1_k127_4903254_3 PFAM type II secretion system K02653 - - 0.000000000000000000008136 92.0
PJD1_k127_4929555_0 PFAM transglutaminase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004042 276.0
PJD1_k127_4929555_1 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000134 195.0
PJD1_k127_4929555_2 S4 domain K14761 - - 0.000000000000000000000000005889 111.0
PJD1_k127_4930450_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0 1076.0
PJD1_k127_4930450_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 1.046e-246 771.0
PJD1_k127_4930450_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 465.0
PJD1_k127_4930450_3 Putative MetA-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001116 256.0
PJD1_k127_4930450_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006113 250.0
PJD1_k127_4930450_5 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000001919 160.0
PJD1_k127_4930450_6 PFAM FeoA family protein K04758 - - 0.000000000000000000000000000001543 122.0
PJD1_k127_4930450_7 iron ion homeostasis K04758 - - 0.00000000000000001251 85.0
PJD1_k127_4930450_8 LemA family K03744 - - 0.0000000000008812 69.0
PJD1_k127_4938811_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009351 311.0
PJD1_k127_4938811_1 COG2199 FOG GGDEF domain - - - 0.000000000000000000000000000000000000000003139 175.0
PJD1_k127_5010080_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 341.0
PJD1_k127_5010080_1 Stage II sporulation protein K06381 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009677 286.0
PJD1_k127_5010080_2 queuosine biosynthetic process K03470,K09765 - 1.17.99.6,3.1.26.4 0.00000000000000000000000000000002954 128.0
PJD1_k127_5010080_3 Protein of unknown function (DUF2905) - - - 0.0000000000000000007872 89.0
PJD1_k127_5017017_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 601.0
PJD1_k127_5017017_1 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000001118 149.0
PJD1_k127_5017017_2 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 0.0000003795 54.0
PJD1_k127_5023230_0 PFAM periplasmic solute binding protein K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000163 240.0
PJD1_k127_5023230_1 PFAM ABC transporter K09817 - - 0.00000000000000000000000000000000000000000000000000000000000007538 221.0
PJD1_k127_5023230_2 Ferric uptake regulator family K03711 - - 0.00000000000000000000000244 107.0
PJD1_k127_5023230_3 spore germination - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000004965 54.0
PJD1_k127_5033846_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 475.0
PJD1_k127_5033846_1 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000165 117.0
PJD1_k127_5048915_0 Protein of unknown function DUF262 - - - 0.0000000000000000000000000000000000000000004016 171.0
PJD1_k127_5048915_1 - - - - 0.000000000000000000000001627 109.0
PJD1_k127_5048915_3 - - - - 0.00005664 47.0
PJD1_k127_5058883_0 Belongs to the helicase family. UvrD subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 580.0
PJD1_k127_5068562_0 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol - - - 0.000000000000000000000000000000000000007301 158.0
PJD1_k127_5068562_2 Filamentation induced by cAMP protein fic - - - 0.000005525 59.0
PJD1_k127_5068562_3 Endonuclease Exonuclease Phosphatase - - - 0.00001139 58.0
PJD1_k127_5068562_4 Putative regulatory protein - - - 0.00004901 49.0
PJD1_k127_5074285_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.049e-238 750.0
PJD1_k127_5074285_1 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000006331 194.0
PJD1_k127_5093716_0 protein with SCP PR1 domains - - - 0.000000000000000000000000000000000000007531 150.0
PJD1_k127_5093716_1 Cysteine-rich CPCC - - - 0.000000000001485 72.0
PJD1_k127_5109207_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.029e-298 936.0
PJD1_k127_5109207_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 529.0
PJD1_k127_5109207_2 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 513.0
PJD1_k127_5109207_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 404.0
PJD1_k127_5109207_4 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 353.0
PJD1_k127_5109207_5 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.000447 42.0
PJD1_k127_5217017_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006732 402.0
PJD1_k127_5217017_1 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000002875 133.0
PJD1_k127_5217017_2 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000003474 92.0
PJD1_k127_5217017_3 PFAM NIF3 (NGG1p interacting factor 3) - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00002443 47.0
PJD1_k127_5224345_0 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 495.0
PJD1_k127_5224345_1 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007008 476.0
PJD1_k127_5224345_10 nitrate reductase K02570 - - 0.00000000000000000000003005 102.0
PJD1_k127_5224345_2 PFAM ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 440.0
PJD1_k127_5224345_3 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 431.0
PJD1_k127_5224345_4 Probable molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 424.0
PJD1_k127_5224345_5 HlyD family secretion protein K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 398.0
PJD1_k127_5224345_6 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000002885 255.0
PJD1_k127_5224345_7 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000008269 194.0
PJD1_k127_5224345_8 PFAM regulatory protein TetR - - - 0.000000000000000000000000000000000000000002408 162.0
PJD1_k127_5224345_9 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.00000000000000000000000002919 120.0
PJD1_k127_52711_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 412.0
PJD1_k127_52711_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 301.0
PJD1_k127_52711_2 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000003735 214.0
PJD1_k127_52711_3 lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000008856 207.0
PJD1_k127_52711_4 PFAM Protein-tyrosine phosphatase, low molecular weight K01104,K20201 - 3.1.3.48,3.9.1.2 0.00000000000000001258 86.0
PJD1_k127_52711_5 exodeoxyribonuclease VII activity K03602 - 3.1.11.6 0.0000000000009939 70.0
PJD1_k127_5381516_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346 488.0
PJD1_k127_5381516_1 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000002702 264.0
PJD1_k127_5381516_2 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000000003328 148.0
PJD1_k127_5381516_3 phosphatidate phosphatase activity K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.000000000000002946 84.0
PJD1_k127_5391439_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 2.887e-197 636.0
PJD1_k127_5435855_0 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 321.0
PJD1_k127_5435855_1 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000008585 159.0
PJD1_k127_5435855_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000003281 76.0
PJD1_k127_5498328_0 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000196 247.0
PJD1_k127_5498328_1 PFAM HPP family K07168 - - 0.000000000000000000000000000000000000000000000000000000047 197.0
PJD1_k127_5498328_2 - - - - 0.000000000000000000000000000000000005087 140.0
PJD1_k127_5498328_3 Protein of unknown function, DUF488 - - - 0.000408 43.0
PJD1_k127_5550047_0 FIST_C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000749 326.0
PJD1_k127_5550047_1 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007512 299.0
PJD1_k127_5550047_2 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 295.0
PJD1_k127_5556432_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.232e-291 914.0
PJD1_k127_5556432_1 Type IV pilus assembly protein PilM; K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 323.0
PJD1_k127_5556432_2 phosphoesterase RecJ domain protein K06881 GO:0008150,GO:0040007 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000002641 263.0
PJD1_k127_5556432_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000245 247.0
PJD1_k127_5556432_4 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000000000000000000000000000000000000000000002505 225.0
PJD1_k127_5556432_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000004253 145.0
PJD1_k127_5556432_6 Pilus assembly protein, PilO K02664 - - 0.0000000000000000001045 96.0
PJD1_k127_5556432_7 Pilus assembly protein, PilP K02665 - - 0.000000000003812 74.0
PJD1_k127_5556432_8 Fimbrial assembly protein (PilN) K02663 - - 0.00000003655 62.0
PJD1_k127_5557259_0 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 5.281e-208 649.0
PJD1_k127_5557259_1 reductase, alpha subunit K00394 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 553.0
PJD1_k127_5557259_2 reductase, beta subunit K00395 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000001183 224.0
PJD1_k127_5558511_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1189.0
PJD1_k127_5558511_1 Nucleotidyl transferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 364.0
PJD1_k127_5558511_2 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000147 259.0
PJD1_k127_5558511_3 sulfur carrier activity K04085 - - 0.00000000000000000000001242 102.0
PJD1_k127_5558511_4 GYD domain - - - 0.00000000000001033 74.0
PJD1_k127_5558511_5 - - - - 0.000009475 49.0
PJD1_k127_5562076_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 2.5e-323 1005.0
PJD1_k127_5562076_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 421.0
PJD1_k127_5562076_2 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000008436 77.0
PJD1_k127_5565033_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 346.0
PJD1_k127_5565033_1 ABC-2 type transporter K09694 - - 0.000000000000000000000000000001984 121.0
PJD1_k127_5565033_2 protein histidine kinase activity K01768,K03406,K07636,K07716,K17763 - 2.7.13.3,4.6.1.1 0.0000000000000000000000000004125 123.0
PJD1_k127_5565033_3 PilZ domain - - - 0.00000000000000000000001173 110.0
PJD1_k127_5578970_0 Glycosyltransferase family 9 (heptosyltransferase) K02841,K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002794 334.0
PJD1_k127_5578970_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000004674 152.0
PJD1_k127_5578970_2 electron transfer activity K00428 - 1.11.1.5 0.000000000000000000000000000214 120.0
PJD1_k127_5582021_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007303 461.0
PJD1_k127_5582021_1 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000253 181.0
PJD1_k127_5585667_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.379e-276 861.0
PJD1_k127_5585667_1 ACT domain K01653 - 2.2.1.6 0.000001674 49.0
PJD1_k127_5588552_0 geranylgeranyl reductase activity K14266 - 1.14.19.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 407.0
PJD1_k127_5588552_1 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002696 254.0
PJD1_k127_5588552_2 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000006141 113.0
PJD1_k127_5588552_3 COG2199 FOG GGDEF domain - - - 0.000001669 58.0
PJD1_k127_5602459_0 phosphoglucosamine mutase activity K01835,K01840 - 5.4.2.2,5.4.2.8 1.355e-219 694.0
PJD1_k127_5602459_1 3-isopropylmalate dehydrogenase activity K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0040007,GO:0044424,GO:0044464,GO:0055114 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000004072 227.0
PJD1_k127_5602459_2 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.00003149 46.0
PJD1_k127_5620524_0 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002911 554.0
PJD1_k127_5620524_1 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000006653 137.0
PJD1_k127_5625937_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1243.0
PJD1_k127_5625937_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000673 380.0
PJD1_k127_5625937_2 PFAM metal-dependent phosphohydrolase, HD sub domain K06950 - - 0.000000000000000000000000000000000000000000000000000000000000002538 222.0
PJD1_k127_5625937_3 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000003692 158.0
PJD1_k127_5625937_4 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K13640 GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000004621 128.0
PJD1_k127_5625937_5 Belongs to the small heat shock protein (HSP20) family K06335,K13993 GO:0001666,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016310,GO:0019538,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0036293,GO:0036294,GO:0040007,GO:0040008,GO:0042221,GO:0042594,GO:0043170,GO:0043207,GO:0043412,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045926,GO:0046777,GO:0048519,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0065007,GO:0070482,GO:0070887,GO:0071453,GO:0071456,GO:0071496,GO:0071704,GO:0071944,GO:0075136,GO:1901564 - 0.000000000000003592 78.0
PJD1_k127_5630540_0 chromate transport K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 340.0
PJD1_k127_5630540_1 ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 286.0
PJD1_k127_5630540_2 PFAM SufBD protein K07033 - - 0.000000000000000000000000000000000000000000000000000000007908 205.0
PJD1_k127_5630540_3 Uncharacterised protein family UPF0066 - - - 0.0000000000000000000000000000000000000000000000002219 179.0
PJD1_k127_5636365_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 529.0
PJD1_k127_5636365_1 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009997 251.0
PJD1_k127_5636365_2 lyase activity - - - 0.0000000000000000000000000000000001041 141.0
PJD1_k127_5636365_3 part of a sulfur-relay system K11179 GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097163,GO:0140104,GO:1901360 - 0.000000000000000000000000001689 113.0
PJD1_k127_5636365_4 lyase activity - - - 0.000000000000009174 78.0
PJD1_k127_5648281_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006536 356.0
PJD1_k127_5648281_1 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000002392 129.0
PJD1_k127_5648281_2 part of a sulfur-relay system K11179 GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097163,GO:0140104,GO:1901360 - 0.000000000000000000000000001689 113.0
PJD1_k127_5648281_3 lyase activity - - - 0.00000000000004449 76.0
PJD1_k127_5648347_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 4.261e-313 966.0
PJD1_k127_5648347_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.291e-246 772.0
PJD1_k127_5648347_2 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 380.0
PJD1_k127_5648347_3 PFAM DAHP synthetase I KDSA K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 377.0
PJD1_k127_5648347_4 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007284 354.0
PJD1_k127_5648347_5 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000005929 254.0
PJD1_k127_5648347_6 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000257 250.0
PJD1_k127_5653035_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002315 282.0
PJD1_k127_5653035_1 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000009175 159.0
PJD1_k127_5653035_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000001732 105.0
PJD1_k127_5660397_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000007974 222.0
PJD1_k127_5660397_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000156 162.0
PJD1_k127_5665305_0 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 376.0
PJD1_k127_5665305_1 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 312.0
PJD1_k127_5665305_2 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005248 295.0
PJD1_k127_5665305_3 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005169 255.0
PJD1_k127_5667225_0 Glycosyl hydrolase family 57 - - - 5.265e-243 771.0
PJD1_k127_5667225_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 595.0
PJD1_k127_5667225_10 - - - - 0.000000000000000000000001591 118.0
PJD1_k127_5667225_12 cell cycle K05589,K12065,K13052 - - 0.000000000000318 73.0
PJD1_k127_5667225_13 Hypothetical methyltransferase K07755 - 2.1.1.137 0.0000000006291 61.0
PJD1_k127_5667225_14 DsrE/DsrF-like family K07092 - - 0.00004207 51.0
PJD1_k127_5667225_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004218 490.0
PJD1_k127_5667225_3 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 469.0
PJD1_k127_5667225_4 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 331.0
PJD1_k127_5667225_5 Hypothetical methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000002638 262.0
PJD1_k127_5667225_6 PFAM SEC-C motif K09858 - - 0.00000000000000000000000000000000000000000000000000000000000000009973 224.0
PJD1_k127_5667225_7 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000003183 179.0
PJD1_k127_5667225_8 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000002051 153.0
PJD1_k127_5667225_9 Arginine-tRNA-protein transferase, N terminus K21420 - 2.3.2.29 0.00000000000000000000000000000000001939 144.0
PJD1_k127_5667740_0 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000000000001251 229.0
PJD1_k127_5667740_1 - - - - 0.0005671 49.0
PJD1_k127_5671720_0 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 539.0
PJD1_k127_5671720_1 Pfam:Arch_ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002196 286.0
PJD1_k127_5671720_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001887 275.0
PJD1_k127_5671720_3 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000001643 168.0
PJD1_k127_5671720_4 regulator, PATAN and FRGAF domain-containing - - - 0.0000000000000000000000000000000000000003248 163.0
PJD1_k127_5671720_5 PFAM response regulator receiver K03413 - - 0.0000000000000000000000000000000000001149 145.0
PJD1_k127_5671720_6 Two component signalling adaptor domain K03408 - - 0.0000000000000000002878 96.0
PJD1_k127_5671720_7 histidine kinase HAMP region domain protein K03406 - - 0.000000000003316 77.0
PJD1_k127_5673625_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 586.0
PJD1_k127_5673625_1 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 394.0
PJD1_k127_5673625_2 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 311.0
PJD1_k127_5673625_3 Sigma factor PP2C-like phosphatases K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 310.0
PJD1_k127_5673625_4 Memo-like protein K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000907 260.0
PJD1_k127_5673625_5 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000003888 207.0
PJD1_k127_5673625_6 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000252 160.0
PJD1_k127_5673625_7 - - - - 0.0002039 47.0
PJD1_k127_5678374_0 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000074 429.0
PJD1_k127_5678374_1 Sulphur transport K07112 - - 0.000000000000000000000000000000007512 131.0
PJD1_k127_5683054_0 Transcriptional regulator K11921,K19338 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 298.0
PJD1_k127_5683054_1 PFAM Rhodanese domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001024 284.0
PJD1_k127_5683054_2 molybdate ion transport - - - 0.0000000000000000000000001974 106.0
PJD1_k127_5683054_3 - - - - 0.00000000000000007069 87.0
PJD1_k127_5683054_4 Sulfurtransferase TusA - - - 0.000002092 49.0
PJD1_k127_5711275_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 573.0
PJD1_k127_5711275_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002693 481.0
PJD1_k127_5711275_2 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 432.0
PJD1_k127_5711275_3 Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003898 386.0
PJD1_k127_5711275_4 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000094 361.0
PJD1_k127_5711275_5 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007427 313.0
PJD1_k127_5711275_6 Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein) K03620,K08354 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009817 273.0
PJD1_k127_5711275_7 - - - - 0.0000002 52.0
PJD1_k127_5743039_0 DsrE/DsrF-like family K07235 - - 0.0000002624 57.0
PJD1_k127_5743039_1 Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions K07237 GO:0002097,GO:0002098,GO:0002143,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1902494,GO:1990228,GO:1990234 - 0.000003059 53.0
PJD1_k127_5743039_2 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0003144 52.0
PJD1_k127_5750251_0 Extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007585 540.0
PJD1_k127_5750251_1 PFAM Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 370.0
PJD1_k127_5754590_0 Sugar (and other) transporter K03446 - - 2.628e-226 708.0
PJD1_k127_5754590_1 HlyD membrane-fusion protein of T1SS K03543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 392.0
PJD1_k127_5754590_2 Outer membrane efflux protein - - - 0.00000000000000001749 83.0
PJD1_k127_5758630_0 Cytochrome c3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 548.0
PJD1_k127_5758630_1 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000184 256.0
PJD1_k127_5758630_10 Curli production assembly/transport component CsgG - - - 0.00008387 54.0
PJD1_k127_5758630_2 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002273 261.0
PJD1_k127_5758630_3 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000002732 210.0
PJD1_k127_5758630_4 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000000000000000000000000000000000000000000002063 199.0
PJD1_k127_5758630_5 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000006491 155.0
PJD1_k127_5758630_6 PPIC-type PPIASE domain - - - 0.000000000000000000000000001335 129.0
PJD1_k127_5758630_7 Putative bacterial lipoprotein (DUF799) - - - 0.000000000000000000000001486 111.0
PJD1_k127_5758630_8 40-residue YVTN family beta-propeller repeat protein - - - 0.00000000000000000000004078 114.0
PJD1_k127_5758630_9 Peptidoglycan-synthase activator LpoB - - - 0.000000000000000003392 94.0
PJD1_k127_5764054_0 Protoporphyrinogen oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 353.0
PJD1_k127_5764054_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000007635 94.0
PJD1_k127_5764054_2 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000002409 63.0
PJD1_k127_5782838_0 Peptidase M15 K02395 - - 0.00000000000000000000000000000000000001649 151.0
PJD1_k127_5782838_1 ErfK YbiS YcfS YnhG family protein - - - 0.000000000000193 72.0
PJD1_k127_5788201_0 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004182 270.0
PJD1_k127_5788201_1 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000003879 231.0
PJD1_k127_5788201_2 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000549 217.0
PJD1_k127_5788201_3 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000001903 201.0
PJD1_k127_5788201_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000157 194.0
PJD1_k127_5788201_5 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000000009999 151.0
PJD1_k127_5788201_6 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000001363 138.0
PJD1_k127_5788201_7 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000004204 108.0
PJD1_k127_5788201_8 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000003625 52.0
PJD1_k127_5815445_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 502.0
PJD1_k127_5815445_1 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 295.0
PJD1_k127_5815445_2 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000001481 137.0
PJD1_k127_5815445_3 iron-sulfur cluster assembly K07033 - - 0.0000000000005237 68.0
PJD1_k127_5815445_4 mttA/Hcf106 family K03116 - - 0.00000000001052 66.0
PJD1_k127_5817164_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 546.0
PJD1_k127_5817164_1 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 352.0
PJD1_k127_5817164_2 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 323.0
PJD1_k127_5817164_3 GYD domain - - - 0.0000000000000000000000000000005353 130.0
PJD1_k127_5817164_4 B12 binding domain - - - 0.00007723 49.0
PJD1_k127_58173_0 ABC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001193 297.0
PJD1_k127_58173_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000001972 173.0
PJD1_k127_58173_2 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000007539 168.0
PJD1_k127_58173_3 radical SAM domain protein - - - 0.000000000000000000000000000000001177 142.0
PJD1_k127_58173_4 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000000000003151 74.0
PJD1_k127_5826803_0 transporter antisigma-factor antagonist STAS K03321 - - 1.697e-221 702.0
PJD1_k127_5826803_1 FAD binding domain K10960,K21401 - 1.3.1.111,1.3.1.83,1.3.99.38 0.00000000000000000000000000000000000005056 154.0
PJD1_k127_5867612_0 His Kinase A (phosphoacceptor) domain - - - 1.143e-256 811.0
PJD1_k127_5867612_1 membrane transporter protein K07090 - - 4.199e-199 627.0
PJD1_k127_5867612_2 phosphorelay signal transduction system K02584,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 506.0
PJD1_k127_5867612_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001084 278.0
PJD1_k127_5867612_4 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000002629 219.0
PJD1_k127_5867612_5 Nitroreductase family K04719 - 1.13.11.79 0.00000000000000000000000000000000000000000000000000000000007746 208.0
PJD1_k127_5867612_6 Universal stress protein family K07090 - - 0.0000000000000000000000000000000000000000000000000000002055 205.0
PJD1_k127_5867612_7 helix_turn_helix gluconate operon transcriptional repressor K03710 - - 0.00000000000000000000000000000000001811 144.0
PJD1_k127_5867612_8 AMP binding - - - 0.00000000000000000000000000000004697 130.0
PJD1_k127_5867612_9 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000004241 94.0
PJD1_k127_5868928_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007577 422.0
PJD1_k127_5868928_1 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003947 373.0
PJD1_k127_5868928_2 glutamine synthetase K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005365 349.0
PJD1_k127_5868928_3 Thiamine biosynthesis protein (ThiI) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 323.0
PJD1_k127_5868928_4 Histidine biosynthesis protein K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001089 286.0
PJD1_k127_5868928_5 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000000000000000009653 245.0
PJD1_k127_5887852_0 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000001437 183.0
PJD1_k127_5887852_1 nucleotide metabolic process - - - 0.0000000000000000000000000000000003767 138.0
PJD1_k127_5892502_0 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 491.0
PJD1_k127_5892502_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000468 276.0
PJD1_k127_5892502_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K14986 - 2.7.13.3 0.000000000000000000000000000001692 132.0
PJD1_k127_5892502_3 Belongs to the HesB IscA family K15724 - - 0.00000000000000000000000001576 112.0
PJD1_k127_5909_0 CBS domain - - - 0.000000000000000000000000000000000000000002945 159.0
PJD1_k127_5909_1 epimerase dehydratase K19997 - 5.1.3.26 0.00000000000000008424 86.0
PJD1_k127_5914947_0 Pyridoxal-phosphate dependent enzyme K06001 - 4.2.1.20 3.837e-223 698.0
PJD1_k127_5914947_1 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000001645 245.0
PJD1_k127_5914947_2 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000007895 190.0
PJD1_k127_5943601_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004389 442.0
PJD1_k127_5943601_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006147 427.0
PJD1_k127_5943601_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000004729 236.0
PJD1_k127_5943601_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000002372 221.0
PJD1_k127_5943601_4 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000007339 188.0
PJD1_k127_5943601_5 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000005762 136.0
PJD1_k127_5943601_6 Belongs to the peptidase M16 family - - - 0.000000000000007775 77.0
PJD1_k127_5949182_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 GO:0003674,GO:0003824,GO:0004812,GO:0004819,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006425,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.18 4.826e-209 655.0
PJD1_k127_5949182_1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 377.0
PJD1_k127_5949182_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 345.0
PJD1_k127_5949182_3 (AIR) carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008951 267.0
PJD1_k127_5955966_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1015.0
PJD1_k127_5955966_1 UbiA prenyltransferase family K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008821 310.0
PJD1_k127_6034056_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 382.0
PJD1_k127_6034056_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000002745 203.0
PJD1_k127_6034056_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000001982 95.0
PJD1_k127_6065739_0 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000001915 214.0
PJD1_k127_6065739_1 PFAM PHP domain - - - 0.000000000000000000000000000000000000001483 153.0
PJD1_k127_6084729_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00437,K05922,K06281 - 1.12.2.1,1.12.5.1,1.12.99.6 7.021e-240 749.0
PJD1_k127_6084729_1 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 425.0
PJD1_k127_6084729_2 Nickel-dependent hydrogenase K06281 - 1.12.99.6 0.000000000000000000000000000000001229 130.0
PJD1_k127_6084729_3 4Fe-4S dicluster domain - - - 0.000000000000000004556 85.0
PJD1_k127_6084729_4 Hydrogenase expression formation protein K03605 GO:0003674,GO:0003824,GO:0004175,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000004415 75.0
PJD1_k127_6164851_0 PFAM Nitrate reductase gamma subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 464.0
PJD1_k127_6164851_1 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000001586 190.0
PJD1_k127_6164851_2 part of a sulfur-relay system K11179 GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097163,GO:0140104,GO:1901360 - 0.0000000000000000000000000000000000002451 141.0
PJD1_k127_6175994_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.018e-201 642.0
PJD1_k127_6175994_1 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006322 272.0
PJD1_k127_6339874_0 Domain of unknown function (DUF3786) - - - 0.00000000000000000000000000000001788 132.0
PJD1_k127_6344086_0 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 2.932e-265 829.0
PJD1_k127_6344086_1 Nickel-dependent hydrogenase K00436 - 1.12.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 465.0
PJD1_k127_6344086_2 Glycosyl hydrolase family 63 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 401.0
PJD1_k127_6344086_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004314 245.0
PJD1_k127_6344086_4 hydrogenase maturation protease - - - 0.0000000000000000000000000000000000001721 146.0
PJD1_k127_6347535_0 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 380.0
PJD1_k127_6347535_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001336 260.0
PJD1_k127_6347535_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000008736 263.0
PJD1_k127_6347535_3 Predicted permease YjgP/YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000001361 220.0
PJD1_k127_6347535_4 permease YjgP YjgQ family K11720 - - 0.00000000000000000000000000000004143 139.0
PJD1_k127_6352169_0 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 310.0
PJD1_k127_6352169_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000006759 166.0
PJD1_k127_6354595_0 Cytochrome c3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 342.0
PJD1_k127_6354595_1 denitrification pathway - - - 0.000000000000000000000000000000000000000000000000000000000000000000006572 241.0
PJD1_k127_6354595_2 chemotaxis protein K03406 - - 0.00000001507 66.0
PJD1_k127_6358990_0 Bacterial regulatory protein, Fis family K07715 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 609.0
PJD1_k127_6358990_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006797 462.0
PJD1_k127_6358990_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 314.0
PJD1_k127_6358990_3 HNH nucleases - - - 0.000000000000000000000000000000000000000003659 156.0
PJD1_k127_6358990_4 PFAM response regulator receiver K03413 - - 0.000000000000000000000000000001079 126.0
PJD1_k127_6358990_5 nuclear chromosome segregation - - - 0.0000000000002912 76.0
PJD1_k127_6360150_0 Winged helix-turn helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000204 290.0
PJD1_k127_6372549_0 NAD(P)H-binding K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008065 571.0
PJD1_k127_6372549_1 ADP-glyceromanno-heptose 6-epimerase activity K08678 - 4.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 553.0
PJD1_k127_6372549_2 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 548.0
PJD1_k127_6372549_3 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000001485 194.0
PJD1_k127_6372549_4 PFAM PHP domain protein K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000001667 185.0
PJD1_k127_6372549_5 SMART Cold shock protein K03704 - - 0.00000000000000000000000001519 109.0
PJD1_k127_6373833_0 ABC transporter K06158 - - 1.357e-240 758.0
PJD1_k127_6373833_1 Maf-like protein K06287 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.00000000000001576 74.0
PJD1_k127_6373944_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 508.0
PJD1_k127_6373944_1 PFAM thiamine pyrophosphate protein domain protein TPP-binding K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000001169 237.0
PJD1_k127_63773_0 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003191 286.0
PJD1_k127_63773_1 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0000000000000000000000000000597 121.0
PJD1_k127_639957_0 Predicted membrane protein (DUF2207) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008181 516.0
PJD1_k127_639957_1 Evidence 4 Homologs of previously reported genes of K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004918 259.0
PJD1_k127_639957_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000469 236.0
PJD1_k127_639957_3 (twin-arginine translocation) pathway signal - - - 0.00000000000000000000000000000000000000000000000000002761 192.0
PJD1_k127_6407962_0 Nickel-dependent hydrogenase K00436 - 1.12.1.2 9.726e-231 720.0
PJD1_k127_6407962_1 NADH ubiquinone oxidoreductase K18006,K18007 - 1.12.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007391 359.0
PJD1_k127_6407962_2 Coenzyme F420-reducing hydrogenase, gamma subunit K18007 - 1.12.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 320.0
PJD1_k127_6407962_3 NADH-quinone oxidoreductase subunit F K18005 - 1.12.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000002368 253.0
PJD1_k127_6413030_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 8.152e-316 988.0
PJD1_k127_6413030_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007343 486.0
PJD1_k127_6413030_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000002191 190.0
PJD1_k127_6413030_3 Regulatory protein recX K03565 - - 0.000000000001459 74.0
PJD1_k127_6448369_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 411.0
PJD1_k127_6448369_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007962 348.0
PJD1_k127_6448369_10 TonB C terminal K03832 - - 0.0003118 51.0
PJD1_k127_6448369_2 Polyprenyl synthetase K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008008 321.0
PJD1_k127_6448369_3 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000481 282.0
PJD1_k127_6448369_4 ferrous iron binding K06990,K09141 - - 0.000000000000000000000000000000000000000000000000000000000004157 211.0
PJD1_k127_6448369_5 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000006345 206.0
PJD1_k127_6448369_6 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000005417 190.0
PJD1_k127_6448369_7 Biopolymer transport protein ExbD/TolR K03560 - - 0.000000000000000000000000000000000000001102 151.0
PJD1_k127_6448369_8 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000006963 147.0
PJD1_k127_6448369_9 Outer membrane lipoprotein - - - 0.000000000000000000000000000002447 132.0
PJD1_k127_6470183_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 8.742e-205 643.0
PJD1_k127_6470183_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 311.0
PJD1_k127_6470183_2 PFAM MOSC domain - - - 0.00000000000000000000000000000000000000000000000000000000000001124 220.0
PJD1_k127_6470183_3 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000199 204.0
PJD1_k127_6470183_4 cytochrome c biogenesis protein K06196 - - 0.00000000000001925 76.0
PJD1_k127_6476182_0 Heavy-metal-associated domain K01533,K17686 - 3.6.3.4,3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 599.0
PJD1_k127_6476182_1 COG0695 Glutaredoxin and related proteins - - - 0.0000000002512 63.0
PJD1_k127_6482559_0 Molecular chaperone. Has ATPase activity K04079 - - 1.806e-212 668.0
PJD1_k127_6498256_0 Domain of unknown function (DUF4070) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 436.0
PJD1_k127_6498256_1 - - - - 0.00000000000000000000000000000000000000000000000000000000008402 206.0
PJD1_k127_6498256_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.000000000002665 68.0
PJD1_k127_6513510_0 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 360.0
PJD1_k127_6513510_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007584 289.0
PJD1_k127_6513510_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008064 293.0
PJD1_k127_6513510_3 HEAT repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003087 283.0
PJD1_k127_6513510_4 histidine kinase HAMP region domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001829 278.0
PJD1_k127_6513510_5 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000001035 261.0
PJD1_k127_6513510_6 Response regulator receiver domain K03413 - - 0.000000000000000000000000000000000000000000002604 166.0
PJD1_k127_6513510_7 TIGRFAM phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 - - 0.0000000000000000000000000000000002384 152.0
PJD1_k127_6513510_8 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000000003712 134.0
PJD1_k127_6523799_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004836 343.0
PJD1_k127_6523799_1 PFAM Alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 309.0
PJD1_k127_6523799_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000002684 262.0
PJD1_k127_6530038_0 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000006808 214.0
PJD1_k127_6530038_1 nucleotidyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000001057 214.0
PJD1_k127_6530038_2 TPM domain - - - 0.0000000000000000000000000000000000000000003009 169.0
PJD1_k127_6530038_3 Diguanylate cyclase - - - 0.000000000000000000000000000000001248 139.0
PJD1_k127_6530038_5 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000003285 86.0
PJD1_k127_6530038_6 Cache domain - - - 0.00000000000008969 81.0
PJD1_k127_6549090_0 DNA polymerase III subunits gamma and tau domain III K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 396.0
PJD1_k127_6549090_1 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003454 276.0
PJD1_k127_6549090_2 calcium, potassium:sodium antiporter activity K07301 - - 0.000000000000000000007734 92.0
PJD1_k127_6549090_5 DNA-binding protein PTS system, IIA component K02806 - - 0.00007211 49.0
PJD1_k127_6549090_6 - - - - 0.0005325 51.0
PJD1_k127_6553704_0 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 0.0 1097.0
PJD1_k127_6553704_1 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.00000000000000000002509 103.0
PJD1_k127_6553704_3 Transcription factor zinc-finger K09981 - - 0.000000000000000002217 93.0
PJD1_k127_6554966_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008682 280.0
PJD1_k127_6554966_1 3-demethylubiquinone-9 3-O-methyltransferase activity K00694,K11936,K20541 - 2.4.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000001161 258.0
PJD1_k127_6554966_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000007807 256.0
PJD1_k127_6576151_0 Haem-binding uptake, Tiki superfamily, ChaN - - - 1.245e-206 678.0
PJD1_k127_6576151_1 Adenylate kinase - - - 0.000000000000000000000000000000000000000000000000000001794 198.0
PJD1_k127_6576151_2 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000002808 64.0
PJD1_k127_6598770_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 405.0
PJD1_k127_6598770_1 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006179 364.0
PJD1_k127_6598770_2 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000000001067 213.0
PJD1_k127_6598770_3 energy transducer activity K03832 - - 0.00000000000000000000001348 110.0
PJD1_k127_6598770_4 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000004188 89.0
PJD1_k127_6598770_5 COG3209 Rhs family protein - - - 0.000000000000000003151 94.0
PJD1_k127_6598770_6 cell adhesion K02457,K02650,K02682 - - 0.00000000000108 78.0
PJD1_k127_6598770_7 Tfp pilus assembly protein tip-associated adhesin PilY1 K02674 - - 0.0000002129 66.0
PJD1_k127_6635531_0 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 322.0
PJD1_k127_6635531_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001338 264.0
PJD1_k127_6635531_2 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000000000002482 155.0
PJD1_k127_6635531_3 bacterial (prokaryotic) histone like domain K05788 - - 0.0000000000000000000000009194 106.0
PJD1_k127_6638044_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 500.0
PJD1_k127_6638044_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000657 63.0
PJD1_k127_6672897_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1139.0
PJD1_k127_6672897_1 C-terminal, D2-small domain, of ClpB protein K03696 - - 0.0 1078.0
PJD1_k127_6672897_10 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005283 346.0
PJD1_k127_6672897_11 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005261 342.0
PJD1_k127_6672897_12 N-Acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 329.0
PJD1_k127_6672897_13 SMART Elongator protein 3 MiaB NifB K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 314.0
PJD1_k127_6672897_14 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 293.0
PJD1_k127_6672897_15 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004665 282.0
PJD1_k127_6672897_16 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004797 280.0
PJD1_k127_6672897_17 ABC transporter permease K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003687 280.0
PJD1_k127_6672897_18 PFAM Isochorismatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004409 251.0
PJD1_k127_6672897_19 PFAM Binding-protein-dependent transport system inner membrane component K02034,K15582 - - 0.00000000000000000000000000000000000000000000000000000000000001309 224.0
PJD1_k127_6672897_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 613.0
PJD1_k127_6672897_20 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000000005558 226.0
PJD1_k127_6672897_21 HEAT repeats - - - 0.00000000000000000000000000000000000000000000000000000000168 221.0
PJD1_k127_6672897_22 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000008708 204.0
PJD1_k127_6672897_24 Thioredoxin-like domain K03671 - - 0.000000000000000000000000000000000000000000000000000246 186.0
PJD1_k127_6672897_25 iron ion homeostasis K03709,K04758 - - 0.000000000000000000000000000000000000000000000000004558 188.0
PJD1_k127_6672897_26 Domain of unknown function (DUF4416) - - - 0.000000000000000000000000000000000000000000002869 169.0
PJD1_k127_6672897_27 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000007667 169.0
PJD1_k127_6672897_28 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000003701 157.0
PJD1_k127_6672897_29 Peptidase C26 K07010 - - 0.00000000000000000000000000000000000000009904 158.0
PJD1_k127_6672897_3 inositol-3-phosphate synthase activity K01858 GO:0003674,GO:0003824,GO:0004512,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009405,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016853,GO:0016872,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044272,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 5.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007152 523.0
PJD1_k127_6672897_30 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000002031 147.0
PJD1_k127_6672897_31 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000002573 136.0
PJD1_k127_6672897_32 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000000000000004074 128.0
PJD1_k127_6672897_33 - - - - 0.000000000000000000000000000000008063 132.0
PJD1_k127_6672897_34 Thioredoxin-like - - - 0.00000000000000000000000000000007082 130.0
PJD1_k127_6672897_35 cell redox homeostasis K02199 - - 0.00000000000000000000000000000007349 131.0
PJD1_k127_6672897_36 Tetratricopeptide repeat - - - 0.0000000000000000000000000000002053 128.0
PJD1_k127_6672897_37 Ribosomal protein S16 K02959 - - 0.0000000000000000000000000009688 113.0
PJD1_k127_6672897_38 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000704 114.0
PJD1_k127_6672897_39 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000000002278 108.0
PJD1_k127_6672897_4 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 456.0
PJD1_k127_6672897_40 tRNA nucleotidyltransferase poly(A) polymerase K00970 - 2.7.7.19 0.00000000000000000000001441 114.0
PJD1_k127_6672897_41 - - - - 0.0000000000000000000005096 107.0
PJD1_k127_6672897_43 protein secretion K03116,K03117 - - 0.00000000000002628 76.0
PJD1_k127_6672897_44 - - - - 0.000002725 49.0
PJD1_k127_6672897_45 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16785 - - 0.0004509 46.0
PJD1_k127_6672897_5 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 437.0
PJD1_k127_6672897_6 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 417.0
PJD1_k127_6672897_7 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 394.0
PJD1_k127_6672897_8 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324 367.0
PJD1_k127_6672897_9 Family 5 K02035,K15580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006367 359.0
PJD1_k127_6673648_0 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009836 295.0
PJD1_k127_6673648_1 Belongs to the helicase family. UvrD subfamily - - - 0.0000000000000000000000000000000000000000000000000000000008431 211.0
PJD1_k127_6688917_0 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 466.0
PJD1_k127_6688917_1 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 386.0
PJD1_k127_6688917_2 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004467 268.0
PJD1_k127_6688917_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000001289 94.0
PJD1_k127_6688917_4 Endonuclease containing a URI domain K07461 - - 0.0000000000001412 73.0
PJD1_k127_6702750_0 PFAM tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 582.0
PJD1_k127_6702750_1 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 343.0
PJD1_k127_6702750_2 COG0564 Pseudouridylate synthases, 23S RNA-specific K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000009134 263.0
PJD1_k127_6702750_3 denitrification pathway K02569,K15876 - - 0.00000000000000000000000000000000000000000000000000000168 201.0
PJD1_k127_6702750_4 Universal stress protein family K07090 - - 0.000000000000004063 87.0
PJD1_k127_6703227_0 PFAM Transposase, Mutator family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 563.0
PJD1_k127_6703227_1 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005064 273.0
PJD1_k127_6729101_0 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.000000000000000000000000000000000000001045 151.0
PJD1_k127_6729101_1 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.0000000000000000000001539 98.0
PJD1_k127_6729101_2 PIN domain K07063 - - 0.0000000005149 61.0
PJD1_k127_6729482_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008524 582.0
PJD1_k127_6729482_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 394.0
PJD1_k127_6729482_2 Extracellular solute-binding protein family 3 K07679 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000069 318.0
PJD1_k127_6729482_3 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.000000000000005973 79.0
PJD1_k127_6746994_0 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 595.0
PJD1_k127_6746994_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 361.0
PJD1_k127_6746994_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 284.0
PJD1_k127_6746994_3 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009498 270.0
PJD1_k127_6746994_4 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000003943 167.0
PJD1_k127_6758555_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030312,GO:0030955,GO:0031004,GO:0031224,GO:0031226,GO:0031420,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.12 2.5e-224 706.0
PJD1_k127_6758555_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00009202 45.0
PJD1_k127_6790806_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 381.0
PJD1_k127_6790806_1 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005919 286.0
PJD1_k127_6790806_2 Ribosomal protein L4/L1 family K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000186 231.0
PJD1_k127_6790806_3 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000567 169.0
PJD1_k127_6790806_4 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000197 156.0
PJD1_k127_6790806_5 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000000000000003854 145.0
PJD1_k127_6790806_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000006455 139.0
PJD1_k127_6790806_7 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000006914 108.0
PJD1_k127_6790806_8 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000005181 98.0
PJD1_k127_6889499_0 histidine kinase, HAMP K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000001009 267.0
PJD1_k127_6889499_1 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.000000000001502 74.0
PJD1_k127_699276_0 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006067 381.0
PJD1_k127_71204_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 1.589e-242 773.0
PJD1_k127_71204_1 cytochrome C family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 396.0
PJD1_k127_71204_2 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000000000000000004537 115.0
PJD1_k127_71267_0 PFAM Alpha amylase K00700 - 2.4.1.18 2.481e-247 777.0
PJD1_k127_71267_1 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000003656 195.0
PJD1_k127_7131934_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 488.0
PJD1_k127_7131934_1 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 311.0
PJD1_k127_7131934_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000004404 198.0
PJD1_k127_7141189_0 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 503.0
PJD1_k127_7141189_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 338.0
PJD1_k127_7141189_2 ROK family K00845,K13967,K19979,K20433 - 2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000002701 269.0
PJD1_k127_7141189_3 ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000003792 241.0
PJD1_k127_7141189_4 Peptidase family M23 K21471 - - 0.000000000000000000000000000000000000000000000000000000000003396 227.0
PJD1_k127_7141189_5 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000004615 207.0
PJD1_k127_7141189_6 Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation K09811 - - 0.00000000000000000000000000000001765 138.0
PJD1_k127_7141189_7 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000006407 107.0
PJD1_k127_7141189_8 - - - - 0.0000000000000000001755 93.0
PJD1_k127_7149513_0 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006811 344.0
PJD1_k127_7149513_1 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000459 149.0
PJD1_k127_7153208_0 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000852 428.0
PJD1_k127_7153208_1 Anthranilate synthase component I K01657,K01665,K03342,K13950 - 2.6.1.85,4.1.3.27,4.1.3.38 0.00000000000000000000000000000000008913 134.0
PJD1_k127_7153208_2 HlyD membrane-fusion protein of T1SS K03543 - - 0.00000002594 57.0
PJD1_k127_7162340_0 fatty acid beta-oxidation using acyl-CoA dehydrogenase K03522,K22432 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 1.3.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 491.0
PJD1_k127_7162340_1 malonyl coa-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 328.0
PJD1_k127_7162340_2 PFAM Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 319.0
PJD1_k127_7162340_3 Transposase for insertion sequence element - - - 0.00000000000000000000000000000000000000000000000000000004873 204.0
PJD1_k127_7166826_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004797 432.0
PJD1_k127_7176396_0 GTP-binding GTPase Middle Region K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 516.0
PJD1_k127_7176396_1 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 430.0
PJD1_k127_7176396_2 Appr-1'-p processing enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000007333 232.0
PJD1_k127_7176396_4 His Kinase A (phosphoacceptor) domain - - - 0.0000004574 60.0
PJD1_k127_7193607_0 TIGRFAM molybdenum cofactor synthesis K03750,K07219 - 2.10.1.1 6.179e-228 723.0
PJD1_k127_7193607_1 GAF domain - - - 3.417e-211 707.0
PJD1_k127_7193607_10 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001075 263.0
PJD1_k127_7193607_11 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000246 238.0
PJD1_k127_7193607_12 Protein of unknown function DUF116 K09729 - - 0.000000000000000000000000000000000000000000000000000000000000000338 224.0
PJD1_k127_7193607_13 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.00000000000000000000000000000000000000000000000000000008376 199.0
PJD1_k127_7193607_14 Domain of unknown function (DUF4445) - - - 0.000000000000000000000000000000000000000000000000002432 192.0
PJD1_k127_7193607_15 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000002061 178.0
PJD1_k127_7193607_16 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41 0.00000000000000000000000000000000593 134.0
PJD1_k127_7193607_17 PASTA domain K12132 - 2.7.11.1 0.000000000002955 76.0
PJD1_k127_7193607_18 competence protein - - - 0.0001194 53.0
PJD1_k127_7193607_2 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 534.0
PJD1_k127_7193607_3 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 425.0
PJD1_k127_7193607_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 336.0
PJD1_k127_7193607_5 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 330.0
PJD1_k127_7193607_6 tRNA 3'-trailer cleavage K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 322.0
PJD1_k127_7193607_7 Protein of unknown function (DUF512) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005864 300.0
PJD1_k127_7193607_8 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000408 281.0
PJD1_k127_7193607_9 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008076 268.0
PJD1_k127_7212250_0 Belongs to the peptidase S16 family K01338,K04076 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 420.0
PJD1_k127_7212250_1 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002469 251.0
PJD1_k127_7212250_2 PFAM lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000002059 242.0
PJD1_k127_7212250_3 radical SAM K06871 - - 0.0000000000000000000000000000000000000000001246 172.0
PJD1_k127_7212250_4 sister chromatid segregation - - - 0.000000000000000000000000005889 111.0
PJD1_k127_7213016_0 PLD-like domain K06131 - - 6.508e-212 664.0
PJD1_k127_7213016_1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006571 381.0
PJD1_k127_7213016_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001632 267.0
PJD1_k127_7217823_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 2.984e-249 780.0
PJD1_k127_7217823_1 4Fe-4S dicluster domain K16887 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 398.0
PJD1_k127_7217823_2 PFAM methyl-viologen-reducing hydrogenase delta subunit K16886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 326.0
PJD1_k127_7217823_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000008859 114.0
PJD1_k127_7218440_0 polysaccharide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 517.0
PJD1_k127_7218440_1 Glycosyl Transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 474.0
PJD1_k127_7218440_2 Glycosyl transferase, family 2 K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007126 398.0
PJD1_k127_7218440_3 sugar transferase K00996 - 2.7.8.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 404.0
PJD1_k127_7218440_4 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 318.0
PJD1_k127_7218440_5 Glycosyl transferase family 2 K12984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001102 267.0
PJD1_k127_7218440_6 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000008877 198.0
PJD1_k127_7218440_7 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000599 180.0
PJD1_k127_7218440_8 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.000000000000000002635 85.0
PJD1_k127_7218440_9 GDP-mannose 4,6 dehydratase K01784,K08678 - 4.1.1.35,5.1.3.2 0.00001147 49.0
PJD1_k127_7231650_0 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 295.0
PJD1_k127_7231650_1 response regulator K02282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001076 282.0
PJD1_k127_7231650_2 PFAM Dynamin family - - - 0.00000000000000000000000000000000000001125 154.0
PJD1_k127_7231650_3 Phospholipid methyltransferase - - - 0.000000000000000001266 94.0
PJD1_k127_7253512_0 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 535.0
PJD1_k127_7253512_1 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005084 279.0
PJD1_k127_7253512_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009664 239.0
PJD1_k127_7253512_3 cheY-homologous receiver domain - - - 0.00000000008335 66.0
PJD1_k127_7255191_0 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003902 296.0
PJD1_k127_7255191_1 TonB dependent receptor K16092 - - 0.00000000000000000000000000000000000000000000000000107 194.0
PJD1_k127_7255407_0 PFAM cobalamin (vitamin B12) biosynthesis CbiM K02007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006382 420.0
PJD1_k127_7255407_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000003787 262.0
PJD1_k127_7255407_2 Cobalt transport protein K02008 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002128 255.0
PJD1_k127_7255407_3 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006,K16787 - - 0.000000000000000000000000179 106.0
PJD1_k127_7255407_4 long-chain fatty acid transporting porin activity K06076 - - 0.000001046 53.0
PJD1_k127_7259453_0 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 545.0
PJD1_k127_7264255_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 1.067e-198 629.0
PJD1_k127_7264255_1 Ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001689 262.0
PJD1_k127_7264255_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000121 226.0
PJD1_k127_7264255_3 transmembrane signaling receptor activity K02660,K03406,K03776,K11525 - - 0.0000000000000000000000000000000000000000000000000000001403 199.0
PJD1_k127_7264255_4 Domains REC, HisKA, HATPase_c - - - 0.00000000000000000000000000000000000000000000001361 179.0
PJD1_k127_7264255_5 Histidine kinase K02660,K11525 - - 0.0000000000000000000002082 106.0
PJD1_k127_7283062_0 PFAM Radical SAM domain protein K22227 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 574.0
PJD1_k127_7283062_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 333.0
PJD1_k127_7284675_0 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008634 426.0
PJD1_k127_7284675_1 glycosyl transferase family - - - 0.00000003742 61.0
PJD1_k127_7284675_2 Regulator - - - 0.0001766 51.0
PJD1_k127_7289020_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1909.0
PJD1_k127_7289020_1 RNA polymerase beta subunit external 1 domain K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1628.0
PJD1_k127_7289020_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 332.0
PJD1_k127_7289020_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003636 265.0
PJD1_k127_7289020_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000002511 214.0
PJD1_k127_7289020_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000000000000001232 194.0
PJD1_k127_7289020_6 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000003113 146.0
PJD1_k127_7289020_7 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000000000000000000000886 139.0
PJD1_k127_7289020_8 structural constituent of ribosome K02913 - - 0.0000000000000005615 80.0
PJD1_k127_7289020_9 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000006677 68.0
PJD1_k127_7293125_0 O-Antigen ligase K02847 - - 0.000000000000000000000000000000000000000000000002732 186.0
PJD1_k127_7293125_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000006207 58.0
PJD1_k127_7322173_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 489.0
PJD1_k127_7354962_0 DGC domain - - - 0.00000000000000000000000000000000000000000000000000007177 191.0
PJD1_k127_7354962_1 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000009058 178.0
PJD1_k127_7354962_2 Uncharacterised protein family UPF0066 - - - 0.000000000000000000007853 98.0
PJD1_k127_73600_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 2.767e-273 867.0
PJD1_k127_73600_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 486.0
PJD1_k127_73600_10 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.0000000000000000000000000000000000009402 145.0
PJD1_k127_73600_11 nucleotide catabolic process - - - 0.000000000000000000000000004491 111.0
PJD1_k127_73600_12 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.000001438 50.0
PJD1_k127_73600_13 integral membrane protein - - - 0.00001922 55.0
PJD1_k127_73600_2 Transporter associated domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009253 433.0
PJD1_k127_73600_3 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 410.0
PJD1_k127_73600_4 Ion channel K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 381.0
PJD1_k127_73600_5 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 364.0
PJD1_k127_73600_6 CO dehydrogenase K07321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 312.0
PJD1_k127_73600_7 GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006822 285.0
PJD1_k127_73600_8 Response regulator, receiver K11443 - - 0.00000000000000000000000000000000000000000000000001545 182.0
PJD1_k127_73600_9 Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000196 160.0
PJD1_k127_7383964_0 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 570.0
PJD1_k127_7383964_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009037 316.0
PJD1_k127_7383964_2 lysyltransferase activity K07027 - - 0.000000000000000000000000000000000002432 150.0
PJD1_k127_7383964_3 Domain of Unknown Function (DUF748) - - - 0.00000000002317 67.0
PJD1_k127_7391458_0 Methyltransferase K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004241 336.0
PJD1_k127_7391458_1 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 335.0
PJD1_k127_7391458_2 redox-active disulfide protein 2 - - - 0.00000000000000000002172 94.0
PJD1_k127_7391458_3 Universal stress protein - - - 0.00000000000000001594 93.0
PJD1_k127_7396988_0 PhoQ Sensor K11527 - 2.7.13.3 0.00000000000001271 85.0
PJD1_k127_7396988_1 ATPase histidine kinase DNA gyrase B HSP90 domain protein K07636,K07652 - 2.7.13.3 0.00000006861 64.0
PJD1_k127_7403819_0 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 494.0
PJD1_k127_7403819_1 Protein of unknown function (DUF512) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004996 448.0
PJD1_k127_7403819_10 Protein of unknown function (DUF1189) - - - 0.000000000000000000000000221 112.0
PJD1_k127_7403819_11 Lipopolysaccharide-assembly, LptC-related - - - 0.00000000002573 71.0
PJD1_k127_7403819_2 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 377.0
PJD1_k127_7403819_3 PFAM ABC transporter related K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 290.0
PJD1_k127_7403819_4 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000001117 272.0
PJD1_k127_7403819_5 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001591 272.0
PJD1_k127_7403819_6 - - - - 0.0000000000000000000000000000000000000000000000000000004497 199.0
PJD1_k127_7403819_7 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000000000000000000000000000000000000000000000000001261 191.0
PJD1_k127_7403819_8 OstA-like protein K09774 - - 0.00000000000000000000000000000000001574 140.0
PJD1_k127_7403819_9 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41 0.0000000000000000000000000000001265 130.0
PJD1_k127_7411268_0 Histidine kinase K01768 - 4.6.1.1 6.602e-215 685.0
PJD1_k127_7411268_1 type IV pilus assembly PilZ - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 571.0
PJD1_k127_7411268_2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000002374 101.0
PJD1_k127_7421169_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 388.0
PJD1_k127_7421169_1 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000002166 205.0
PJD1_k127_7421169_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000001453 169.0
PJD1_k127_7421169_3 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000001824 168.0
PJD1_k127_7431272_0 Protein involved in outer membrane biogenesis - - - 2.121e-206 657.0
PJD1_k127_7431272_1 AsmA-like C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004495 276.0
PJD1_k127_7433734_0 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000001444 135.0
PJD1_k127_7433734_1 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000005752 132.0
PJD1_k127_7433734_2 cystathionine K01758 GO:0000096,GO:0000097,GO:0000098,GO:0001558,GO:0003674,GO:0003824,GO:0003962,GO:0004121,GO:0004123,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006355,GO:0006464,GO:0006518,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0008285,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009092,GO:0009403,GO:0009404,GO:0009889,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0016043,GO:0016053,GO:0016054,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0017144,GO:0018065,GO:0018193,GO:0018205,GO:0018272,GO:0018352,GO:0019184,GO:0019219,GO:0019222,GO:0019343,GO:0019344,GO:0019346,GO:0019538,GO:0019748,GO:0019752,GO:0019842,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030170,GO:0030308,GO:0030968,GO:0031323,GO:0031326,GO:0033554,GO:0034097,GO:0034620,GO:0034641,GO:0034976,GO:0035966,GO:0035967,GO:0036094,GO:0036211,GO:0040008,GO:0042127,GO:0042221,GO:0042398,GO:0042802,GO:0042981,GO:0043043,GO:0043066,GO:0043067,GO:0043069,GO:0043122,GO:0043123,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044524,GO:0044540,GO:0044550,GO:0045595,GO:0045597,GO:0045926,GO:0046394,GO:0046395,GO:0047982,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050662,GO:0050667,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051090,GO:0051091,GO:0051092,GO:0051094,GO:0051128,GO:0051147,GO:0051149,GO:0051150,GO:0051152,GO:0051171,GO:0051186,GO:0051188,GO:0051239,GO:0051240,GO:0051252,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051716,GO:0060255,GO:0060548,GO:0065003,GO:0065007,GO:0065009,GO:0070279,GO:0070813,GO:0070814,GO:0070887,GO:0071265,GO:0071266,GO:0071310,GO:0071345,GO:0071704,GO:0071840,GO:0080090,GO:0080146,GO:0097159,GO:0098600,GO:0098606,GO:0098607,GO:1901342,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901607,GO:1902531,GO:1902533,GO:1903506,GO:1904018,GO:1904829,GO:1904831,GO:1905063,GO:1905065,GO:1990823,GO:1990830,GO:2000026,GO:2000112,GO:2001141,GO:2001233,GO:2001234 4.4.1.1 0.0000001715 53.0
PJD1_k127_7435889_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299 - 1.17.1.10,1.17.1.9 5.463e-236 744.0
PJD1_k127_7435889_1 4Fe-4S dicluster domain K16950 - - 0.0000006053 55.0
PJD1_k127_7436462_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000001644 219.0
PJD1_k127_7436462_1 Belongs to the small heat shock protein (HSP20) family K06335,K13993 GO:0001666,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016310,GO:0019538,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0036293,GO:0036294,GO:0040007,GO:0040008,GO:0042221,GO:0042594,GO:0043170,GO:0043207,GO:0043412,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045926,GO:0046777,GO:0048519,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0065007,GO:0070482,GO:0070887,GO:0071453,GO:0071456,GO:0071496,GO:0071704,GO:0071944,GO:0075136,GO:1901564 - 0.00000000000000000000000000000000000000000001602 167.0
PJD1_k127_7436462_2 Lysin motif - - - 0.0000000000000000000000000000000003811 144.0
PJD1_k127_7436462_3 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000001546 116.0
PJD1_k127_7437908_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K14080 - 2.1.1.246,4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 296.0
PJD1_k127_7437908_1 PFAM Carboxymuconolactone decarboxylase - - - 0.0000000351 58.0
PJD1_k127_7472462_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000034 419.0
PJD1_k127_7472462_1 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004624 246.0
PJD1_k127_7472462_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000001407 144.0
PJD1_k127_7480118_0 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007703 300.0
PJD1_k127_7480118_1 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001403 272.0
PJD1_k127_7480118_2 Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import K02007 - - 0.000000000000000000000000001834 116.0
PJD1_k127_7500146_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 582.0
PJD1_k127_7500146_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 466.0
PJD1_k127_7500146_2 TIGRFAM phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001295 263.0
PJD1_k127_7500146_3 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000001769 226.0
PJD1_k127_7500146_4 histidine kinase HAMP region domain protein K03406 - - 0.00000000000000000000000000000000000000004617 164.0
PJD1_k127_7500146_5 deoxyhypusine monooxygenase activity K05384,K05386 - - 0.00000000000000000000004361 104.0
PJD1_k127_7500146_6 - - - - 0.0000007178 51.0
PJD1_k127_7500146_8 Evidence 5 No homology to any previously reported sequences - - - 0.00002662 48.0
PJD1_k127_7522942_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 2.459e-220 712.0
PJD1_k127_7522942_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 572.0
PJD1_k127_7522942_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 330.0
PJD1_k127_7522942_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002781 289.0
PJD1_k127_7562286_0 CHASE K02488,K21009 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000007232 194.0
PJD1_k127_7582503_0 Belongs to the Pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 324.0
PJD1_k127_7582503_1 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000000000000007944 223.0
PJD1_k127_7582503_2 - K07112 - - 0.000000000000000000000000000000000001041 144.0
PJD1_k127_7582503_3 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K00406,K01011,K07112 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000004524 133.0
PJD1_k127_7582503_4 candidate b-glycosidase, glycoside hydrolase family 8 protein K08961 - 4.2.2.20,4.2.2.21 0.000000002228 68.0
PJD1_k127_7582503_5 pfam nudix - - - 0.00005159 46.0
PJD1_k127_7606174_0 Thioesterase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 364.0
PJD1_k127_7606174_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005881 287.0
PJD1_k127_7606174_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007419 247.0
PJD1_k127_7606174_3 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000003392 230.0
PJD1_k127_7606174_4 Belongs to the P-Pant transferase superfamily K06133 - - 0.000000000000000000000000000000000000000000000000000000001433 209.0
PJD1_k127_7606174_5 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000002389 169.0
PJD1_k127_7606174_6 Putative modulator of DNA gyrase K03592 - - 0.00000000000000002618 90.0
PJD1_k127_7606174_7 BioD-like N-terminal domain of phosphotransacetylase K06873 - - 0.000007653 50.0
PJD1_k127_7634993_0 Heat shock 70 kDa protein K04043 - - 7.26e-322 994.0
PJD1_k127_7634993_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 460.0
PJD1_k127_7634993_10 Ribonuclease, BN K07058 - - 0.00000000003908 73.0
PJD1_k127_7634993_2 spermidine synthase activity K00797 GO:0003674,GO:0003824,GO:0004766,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016740,GO:0016765,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 426.0
PJD1_k127_7634993_3 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 402.0
PJD1_k127_7634993_4 metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006523 365.0
PJD1_k127_7634993_5 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 332.0
PJD1_k127_7634993_6 diaminopimelate decarboxylase activity K01581 - 4.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000002295 246.0
PJD1_k127_7634993_7 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000001933 188.0
PJD1_k127_7634993_8 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000008319 163.0
PJD1_k127_7634993_9 PFAM aminotransferase class I and II K04720 - 4.1.1.81 0.00000000000000000000000000000000000000006222 164.0
PJD1_k127_7646272_0 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005603 274.0
PJD1_k127_7646272_1 galactose-1-phosphate K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000008573 213.0
PJD1_k127_7646272_2 nucleotide catabolic process - - - 0.000000000000000000000000000000007036 141.0
PJD1_k127_7713285_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 488.0
PJD1_k127_7878061_0 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 468.0
PJD1_k127_7878061_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 391.0
PJD1_k127_7878061_2 Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein) K03620,K08354 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003556 278.0
PJD1_k127_7878061_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002405 277.0
PJD1_k127_7878061_4 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000001233 61.0
PJD1_k127_79030_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 4.327e-300 933.0
PJD1_k127_79030_1 Transglycosylase K05365,K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006511 490.0
PJD1_k127_79030_2 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 361.0
PJD1_k127_79030_3 zinc ion binding - - - 0.000000000000000000000000000000000000000000000000001769 186.0
PJD1_k127_79030_4 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000009653 160.0
PJD1_k127_79030_5 Competence-damaged protein K03742,K03743 - 3.5.1.42 0.00000000000000000000000000000000002774 139.0
PJD1_k127_79030_6 cell envelope organization K05807,K08309 - - 0.000000000007307 74.0
PJD1_k127_792044_0 Protein of unknown function (DUF3300) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 413.0
PJD1_k127_792044_1 electron transport complex, RnfABCDGE type, B subunit K03616 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 339.0
PJD1_k127_792044_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000001572 228.0
PJD1_k127_792044_3 PFAM 4Fe-4S ferredoxin - - - 0.0000000000000000005584 87.0
PJD1_k127_792044_4 Cupin 2, conserved barrel domain protein - - - 0.0000000000002516 74.0
PJD1_k127_795196_0 Elongation factor G, domain IV K02355 - - 2.82e-297 926.0
PJD1_k127_795196_1 Cytochrome c bacterial - - - 1.384e-198 629.0
PJD1_k127_795196_2 Protein of unknown function (DUF3373) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006028 512.0
PJD1_k127_795196_3 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000472 273.0
PJD1_k127_795196_4 DJ-1/PfpI family K05520 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000000000000000000000001633 248.0
PJD1_k127_795196_5 Cytochrome P460 - - - 0.0000000000000000000000000000000000000000000773 166.0
PJD1_k127_795196_6 part of a sulfur-relay system - - - 0.0000000000000000000000000011 115.0
PJD1_k127_795196_7 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.00000000000000002039 87.0
PJD1_k127_795196_8 Amidohydrolase family - - - 0.00000001906 63.0
PJD1_k127_795196_9 transferase activity, transferring glycosyl groups - - - 0.000002591 56.0
PJD1_k127_804161_0 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004873 327.0
PJD1_k127_804161_1 glycine betaine transport K05845,K05846 - - 0.00000000000000000000000000000000000000006781 158.0
PJD1_k127_804161_2 domain protein - - - 0.000792 50.0
PJD1_k127_805534_0 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588,K04037,K11333 - 1.18.6.1,1.3.7.14,1.3.7.15,1.3.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 481.0
PJD1_k127_805534_1 Nitrogenase component 1 type Oxidoreductase K02586 - 1.18.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 407.0
PJD1_k127_805534_2 peptidyl-lysine modification to peptidyl-hypusine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 365.0
PJD1_k127_805534_3 Elongator protein 3, MiaB family, Radical SAM K02585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 340.0
PJD1_k127_805534_4 PFAM Binding-protein-dependent transport system inner membrane component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 303.0
PJD1_k127_805534_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008355 284.0
PJD1_k127_805534_6 ABC transporter K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004437 279.0
PJD1_k127_805534_7 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000000000000007058 220.0
PJD1_k127_805534_8 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000615 75.0
PJD1_k127_805534_9 4Fe-4S single cluster domain of Ferredoxin I K05337 - - 0.0000000000003817 71.0
PJD1_k127_809644_0 Mo-molybdopterin cofactor metabolic process K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000004504 233.0
PJD1_k127_809644_1 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.0000000000000000116 84.0
PJD1_k127_809644_2 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000000000002649 81.0
PJD1_k127_821741_0 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124,K00335 - 1.6.5.3 8.484e-215 676.0
PJD1_k127_821741_1 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00123,K00336,K05299,K06441 - 1.12.7.2,1.17.1.10,1.17.1.9,1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 388.0
PJD1_k127_821741_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain - - - 0.000000000000000000000000000000000000000000000000000000000002548 215.0
PJD1_k127_82274_0 CoA enzyme activase uncharacterised domain (DUF2229) - - - 6.817e-199 634.0
PJD1_k127_82274_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 311.0
PJD1_k127_82274_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000005167 206.0
PJD1_k127_824033_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 503.0
PJD1_k127_824033_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004185 265.0
PJD1_k127_824033_2 endonuclease III K07457 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003373 260.0
PJD1_k127_824033_3 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000003223 220.0
PJD1_k127_824033_4 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000004906 171.0
PJD1_k127_824033_5 translation release factor activity - - - 0.000000000000000000000000000000000000000002177 159.0
PJD1_k127_824033_6 CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000000000002347 134.0
PJD1_k127_82471_0 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000003079 185.0
PJD1_k127_82471_1 12 heme-binding sites - - - 0.0000000000000000000000000000000000001186 151.0
PJD1_k127_82471_2 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000004072 143.0
PJD1_k127_82471_3 Universal stress protein - - - 0.0000000000002355 80.0
PJD1_k127_827874_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1483.0
PJD1_k127_827874_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 578.0
PJD1_k127_827874_10 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006971 241.0
PJD1_k127_827874_11 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000001159 191.0
PJD1_k127_827874_12 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000000000000000000005328 132.0
PJD1_k127_827874_13 YtkA-like - - - 0.000000000000000000000000001407 117.0
PJD1_k127_827874_15 response regulator - - - 0.00008383 51.0
PJD1_k127_827874_2 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 595.0
PJD1_k127_827874_3 Nitronate monooxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 550.0
PJD1_k127_827874_4 protein secretion K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 569.0
PJD1_k127_827874_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009744 403.0
PJD1_k127_827874_6 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 394.0
PJD1_k127_827874_7 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008837 402.0
PJD1_k127_827874_8 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 376.0
PJD1_k127_827874_9 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 335.0
PJD1_k127_83552_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 2.221e-212 672.0
PJD1_k127_83552_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000001755 83.0
PJD1_k127_842449_0 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 601.0
PJD1_k127_842449_1 CHASE2 K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 566.0
PJD1_k127_844022_0 PFAM S-adenosylmethionine synthetase (MAT) K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 368.0
PJD1_k127_844022_1 Metal-dependent phosphohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004496 265.0
PJD1_k127_844022_2 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000001316 158.0
PJD1_k127_844022_3 Glutathione peroxidase - - - 0.0000000000000000000000000000000000003241 146.0
PJD1_k127_844022_4 - - - - 0.000000000000000000000000000003805 124.0
PJD1_k127_844022_5 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000002217 63.0
PJD1_k127_850230_0 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000075 252.0
PJD1_k127_850230_1 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000001269 201.0
PJD1_k127_850230_2 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000001684 146.0
PJD1_k127_861322_0 Phosphoglycerate kinase K00927 - 2.7.2.3 4.447e-200 629.0
PJD1_k127_861322_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 529.0
PJD1_k127_861322_10 SurA N-terminal domain K03770 - 5.2.1.8 0.0000000000000000000000000000000155 134.0
PJD1_k127_861322_11 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000002906 93.0
PJD1_k127_861322_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 479.0
PJD1_k127_861322_3 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 439.0
PJD1_k127_861322_4 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009297 419.0
PJD1_k127_861322_5 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 367.0
PJD1_k127_861322_6 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 332.0
PJD1_k127_861322_7 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000006103 219.0
PJD1_k127_861322_8 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000000000000000000000000000000000000001323 211.0
PJD1_k127_861322_9 Argininosuccinate lyase C-terminal K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000007846 183.0
PJD1_k127_862230_0 PFAM Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 449.0
PJD1_k127_862230_1 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000006627 169.0
PJD1_k127_862230_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000009492 74.0
PJD1_k127_88622_0 Phage integrase, N-terminal SAM-like domain K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 321.0
PJD1_k127_88622_1 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004677 243.0
PJD1_k127_88622_2 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) K00564,K15460 - 2.1.1.172,2.1.1.223 0.0000000000000000000000000000000000000000000000000000000000007404 218.0
PJD1_k127_88622_3 RNase_H superfamily K07502 - - 0.00000000000000000000000000000000000000000000000000000000000428 218.0
PJD1_k127_88622_4 HAD-hyrolase-like K01091 - 3.1.3.18 0.0000000000000000000001105 99.0
PJD1_k127_886849_0 Beta Propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632 459.0
PJD1_k127_886849_1 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007078 364.0
PJD1_k127_888773_0 Belongs to the PstS family K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 473.0
PJD1_k127_888773_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 428.0
PJD1_k127_888773_2 PFAM binding-protein-dependent transport systems inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 417.0
PJD1_k127_888773_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 413.0
PJD1_k127_888773_4 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000001095 132.0
PJD1_k127_895270_0 myo-inosose-2 dehydratase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 319.0
PJD1_k127_895270_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001963 283.0
PJD1_k127_895270_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000002007 186.0
PJD1_k127_895270_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000001611 166.0
PJD1_k127_895270_4 Putative regulatory protein - - - 0.000000000000000000000008473 103.0
PJD1_k127_904129_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008537 418.0
PJD1_k127_904129_1 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 361.0
PJD1_k127_904129_2 PFAM peptidase M48 Ste24p K07387 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 300.0
PJD1_k127_904129_3 Ammonium Transporter K03320 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000001312 197.0
PJD1_k127_904129_4 Nitrogen regulatory protein P-II K04751 - - 0.00000000000000000000000000000000000000000000001089 173.0
PJD1_k127_907127_0 SMART Elongator protein 3 MiaB NifB - - - 7.409e-226 705.0
PJD1_k127_907127_1 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006314 581.0
PJD1_k127_907127_2 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 545.0
PJD1_k127_907127_3 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 368.0
PJD1_k127_907127_4 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000002647 212.0
PJD1_k127_907127_5 MlaC protein K07323 - - 0.000000000000000000000000000000000000000000000000000000000003054 214.0
PJD1_k127_907127_6 ABC transporter K01990,K09695 - - 0.0000000000002228 70.0
PJD1_k127_914907_0 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 547.0
PJD1_k127_914907_1 May be involved in recombinational repair of damaged DNA K03631 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 412.0
PJD1_k127_914907_10 iron dependent repressor - - - 0.0001873 51.0
PJD1_k127_914907_2 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006433 329.0
PJD1_k127_914907_3 membrane K09133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 323.0
PJD1_k127_914907_4 ParB-like nuclease domain K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009783 309.0
PJD1_k127_914907_5 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 300.0
PJD1_k127_914907_6 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.0000000000000000000000000000000000000000000000000981 183.0
PJD1_k127_914907_7 NTPase - - - 0.0000000000000000000000000000000000000000001229 165.0
PJD1_k127_914907_8 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 - 1.2.7.3 0.0000000000000003712 81.0
PJD1_k127_914907_9 PFAM Nucleotidyl transferase K00966,K00992 GO:0000166,GO:0000270,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006040,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019752,GO:0030203,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044281,GO:0046872,GO:0070569,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.7.13,2.7.7.99 0.00001035 48.0
PJD1_k127_917969_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 1.178e-194 615.0
PJD1_k127_917969_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 505.0
PJD1_k127_917969_2 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000002009 265.0
PJD1_k127_917969_3 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000000001386 235.0
PJD1_k127_917969_4 Lumazine binding domain K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000002606 200.0
PJD1_k127_917969_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000009584 138.0
PJD1_k127_917969_6 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000003201 133.0
PJD1_k127_91964_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 392.0
PJD1_k127_924183_0 Competence protein K02238 - - 0.00000000000000000000000000000000000000000000000000000000001518 215.0
PJD1_k127_924183_1 Winged helix-turn-helix DNA-binding - - - 0.0000000000000000000000000000000000000001391 155.0
PJD1_k127_924183_2 Histidine kinase K02660,K11525 - - 0.0000000000000000000000000000001098 138.0
PJD1_k127_936642_0 Protein of unknown function DUF89 K09116 - - 0.000000000000000000000000000000000000000000000000000000000000004202 226.0
PJD1_k127_936642_1 Telomere recombination K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000001486 175.0
PJD1_k127_936642_2 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000000000000000000000005523 111.0
PJD1_k127_954422_0 Uroporphyrinogen decarboxylase (URO-D) K14080 - 2.1.1.246 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003656 435.0
PJD1_k127_954422_1 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 319.0
PJD1_k127_954422_2 TIGRFAM iron-sulfur cluster binding protein - - - 0.000000000000000000000000000000000000000000000004024 179.0
PJD1_k127_954422_3 Tetrahydromethanopterin S-methyltransferase MtrH subunit K00584 - 2.1.1.86 0.0000000000000000000000000000000001573 135.0
PJD1_k127_954422_4 Domain of unknown function (DUF4445) - - - 0.00000000000000000000001158 102.0
PJD1_k127_956052_0 Metallo-beta-lactamase superfamily K22405 - 1.6.3.4 2.459e-209 657.0
PJD1_k127_956052_1 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000001154 164.0
PJD1_k127_956052_2 Cytochrome c K08738 - - 0.00000000000000000000000005832 110.0
PJD1_k127_956052_3 - - - - 0.000000000008233 74.0
PJD1_k127_956052_4 sister chromatid segregation - - - 0.0000000007258 65.0
PJD1_k127_963434_0 Rhs element vgr protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002719 319.0
PJD1_k127_963434_1 phage tail region protein - - - 0.00000000000000000000000000000000000000000000000000000000000009738 215.0
PJD1_k127_963434_2 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000724 216.0
PJD1_k127_963434_3 PFAM T4-like virus tail tube protein gp19 - - - 0.000000000000000000000000000000000000000000000000000000002166 202.0
PJD1_k127_963434_4 - - - - 0.000000000000000000000000000000000000000000000000001742 184.0
PJD1_k127_963434_5 PFAM Phage late control gene D protein (GPD) - - - 0.000000000000000000000000000000000000000000003321 177.0
PJD1_k127_963434_6 - - - - 0.0000000000000009176 82.0
PJD1_k127_963434_7 PAAR repeat-containing protein - - - 0.0000000000001032 72.0
PJD1_k127_967733_0 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001706 248.0
PJD1_k127_967733_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000002531 170.0
PJD1_k127_967733_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000004271 156.0
PJD1_k127_967733_3 4Fe-4S binding domain - - - 0.00000000000000000000000000000000003283 135.0
PJD1_k127_967733_4 PIN domain K07063 - - 0.000000000000000000000000000000002336 134.0
PJD1_k127_971636_0 GGDEF domain K21088 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 473.0
PJD1_k127_971636_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004809 370.0
PJD1_k127_971636_2 queuosine metabolic process K04068,K10026 - 1.97.1.4,4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000001204 243.0
PJD1_k127_971636_3 isopentenyl-diphosphate delta-isomerase activity K00949,K01823 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.6.2,5.3.3.2 0.000000000000000000000000000000000000000000000000000006011 199.0
PJD1_k127_971636_4 PFAM Lytic K08309 - - 0.0000000000000000000000000000000000000000002334 167.0
PJD1_k127_971975_0 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000001495 196.0
PJD1_k127_971975_1 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000002862 151.0
PJD1_k127_971975_2 4 iron, 4 sulfur cluster binding K07139 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464,GO:0048037,GO:0051536,GO:0051539,GO:0051540 - 0.0000000000000000000000000000000000608 136.0
PJD1_k127_971975_3 Belongs to the 'phage' integrase family - - - 0.00000000000002454 78.0
PJD1_k127_983381_0 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 449.0
PJD1_k127_983381_1 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K01883,K02533,K08281,K15396 - 2.1.1.200,3.5.1.19,6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000009232 233.0
PJD1_k127_983381_2 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000001987 98.0
PJD1_k127_983381_3 Thiamine biosynthesis K03154 - - 0.000000000000006439 76.0
PJD1_k127_993289_0 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000001244 212.0
PJD1_k127_993289_1 - - - - 0.0003134 46.0