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Overview

ID MAG02874
Name PJD1_bin.40
Sample SMP0067
Taxonomy
Kingdom Bacteria
Phylum Patescibacteriota
Class Microgenomatia
Order GWA2-44-7
Family UBA8517
Genus WO2-FULL-39-9
Species
Assembly information
Completeness (%) 94.04
Contamination (%) 0.12
GC content (%) 40.0
N50 (bp) 42,618
Genome size (bp) 1,071,529

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes846

Gene name Description KEGG GOs EC E-value Score Sequence
PJD1_k127_103116_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 460.0
PJD1_k127_103116_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007387 309.0
PJD1_k127_106463_0 signal peptidase K13280 - 3.4.21.89 0.0000000000000004516 89.0
PJD1_k127_106463_1 PFAM peptidase C60 sortase A and B - - - 0.0000009202 58.0
PJD1_k127_106463_2 cell adhesion involved in biofilm formation - - - 0.00003369 56.0
PJD1_k127_1167122_0 - - - - 0.0000000000000000000000000000000002241 141.0
PJD1_k127_1167122_1 Psort location CytoplasmicMembrane, score K09793 - - 0.0000000000000000000001255 103.0
PJD1_k127_1167122_2 adenylate kinase activity - - - 0.000000002602 65.0
PJD1_k127_1167122_3 Acetyl xylan esterase (AXE1) K06889 - - 0.000001127 58.0
PJD1_k127_134995_0 PFAM PDZ DHR GLGF domain protein K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000001498 229.0
PJD1_k127_134995_1 Single-stranded DNA-binding protein K03111 - - 0.000000000000000000000000000000000001095 145.0
PJD1_k127_134995_2 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000002581 84.0
PJD1_k127_134995_3 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000004183 69.0
PJD1_k127_1480589_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 1.124e-291 918.0
PJD1_k127_1480589_1 GTP-binding protein TypA K06207 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 610.0
PJD1_k127_1480589_10 serine-type peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008691 371.0
PJD1_k127_1480589_100 Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose K16212 - 2.4.1.281 0.0005701 51.0
PJD1_k127_1480589_11 PFAM aminotransferase, class I K00812,K10907 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 370.0
PJD1_k127_1480589_12 Single-strand DNA-specific exonuclease, C terminal domain K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003169 362.0
PJD1_k127_1480589_13 Protein of unknown function (DUF3417) K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 361.0
PJD1_k127_1480589_14 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 348.0
PJD1_k127_1480589_15 COGs COG1541 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 354.0
PJD1_k127_1480589_16 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 350.0
PJD1_k127_1480589_17 L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp K01876,K09759 - 6.1.1.12,6.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 349.0
PJD1_k127_1480589_18 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009099 332.0
PJD1_k127_1480589_19 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 331.0
PJD1_k127_1480589_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 - 3.6.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 602.0
PJD1_k127_1480589_20 PolyA polymerase K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 317.0
PJD1_k127_1480589_21 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 311.0
PJD1_k127_1480589_22 MFS/sugar transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003666 289.0
PJD1_k127_1480589_23 SPFH domain-Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004404 280.0
PJD1_k127_1480589_24 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002307 270.0
PJD1_k127_1480589_25 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009272 252.0
PJD1_k127_1480589_26 serine-type peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001652 257.0
PJD1_k127_1480589_27 metalloendopeptidase activity K08602 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002655 266.0
PJD1_k127_1480589_28 ATPases associated with a variety of cellular activities K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000004753 233.0
PJD1_k127_1480589_29 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.00000000000000000000000000000000000000000000000000000000000000005198 235.0
PJD1_k127_1480589_3 Magnesium chelatase, subunit ChlI K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 572.0
PJD1_k127_1480589_30 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074,K12257 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000001827 220.0
PJD1_k127_1480589_31 PFAM Rhomboid family protein - - - 0.000000000000000000000000000000000000000000000000000000008135 205.0
PJD1_k127_1480589_32 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K01142,K10773 - 3.1.11.2,4.2.99.18 0.00000000000000000000000000000000000000000000000000000008749 201.0
PJD1_k127_1480589_33 PFAM Bacterial type II secretion system protein F domain K02653 - - 0.0000000000000000000000000000000000000000000000000000009158 207.0
PJD1_k127_1480589_34 protein histidine kinase activity K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000001775 203.0
PJD1_k127_1480589_35 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000001499 193.0
PJD1_k127_1480589_36 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000001593 198.0
PJD1_k127_1480589_37 Cupin domain - - - 0.00000000000000000000000000000000000000000000000005431 182.0
PJD1_k127_1480589_38 Peptidase_C39 like family - - - 0.0000000000000000000000000000000000000000000000000606 192.0
PJD1_k127_1480589_39 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000001804 184.0
PJD1_k127_1480589_4 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 528.0
PJD1_k127_1480589_40 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000003463 181.0
PJD1_k127_1480589_41 Belongs to the peptidase S11 family K07258 GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.16.4 0.0000000000000000000000000000000000000000000007055 178.0
PJD1_k127_1480589_42 ABC 3 transport family K09816 - - 0.0000000000000000000000000000000000000000000007801 175.0
PJD1_k127_1480589_43 UBA THIF-type NAD FAD binding - - - 0.000000000000000000000000000000000000000000005344 176.0
PJD1_k127_1480589_44 Protein of unknown function (DUF3048) C-terminal domain - - - 0.000000000000000000000000000000000000000000257 173.0
PJD1_k127_1480589_45 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000003244 159.0
PJD1_k127_1480589_46 TspO/MBR family K05770 - - 0.000000000000000000000000000000000000000005297 158.0
PJD1_k127_1480589_47 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000001963 160.0
PJD1_k127_1480589_48 - - - - 0.0000000000000000000000000000000000000002681 159.0
PJD1_k127_1480589_5 PFAM type II secretion system protein E K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 467.0
PJD1_k127_1480589_50 response regulator receiver - - - 0.00000000000000000000000000000000000003239 162.0
PJD1_k127_1480589_51 - - - - 0.000000000000000000000000000000000000143 153.0
PJD1_k127_1480589_52 Serine hydrolase K07002 - - 0.0000000000000000000000000000000002381 138.0
PJD1_k127_1480589_53 Pfam:UPF0118 - - - 0.0000000000000000000000000000000009813 143.0
PJD1_k127_1480589_54 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000001014 136.0
PJD1_k127_1480589_55 CmpX protein - - - 0.00000000000000000000000000000001918 134.0
PJD1_k127_1480589_56 isopentenyl-diphosphate delta-isomerase activity - - - 0.00000000000000000000000000007706 121.0
PJD1_k127_1480589_57 Immunoglobulin-like domain of bacterial spore germination - - - 0.0000000000000000000000000008244 121.0
PJD1_k127_1480589_58 Regulatory protein RecX K03565 - - 0.0000000000000000000000000009526 121.0
PJD1_k127_1480589_59 nuclease - - - 0.000000000000000000000000005786 120.0
PJD1_k127_1480589_6 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 457.0
PJD1_k127_1480589_60 Mechanosensitive ion channel K22044 - - 0.00000000000000000000000004553 114.0
PJD1_k127_1480589_61 PFAM RNA recognition motif - - - 0.0000000000000000000000001307 109.0
PJD1_k127_1480589_62 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000258 98.0
PJD1_k127_1480589_64 Transcriptional regulatory protein, C terminal K07667 - - 0.000000000000000007646 88.0
PJD1_k127_1480589_65 Belongs to the Fur family K02076,K03711 - - 0.0000000000000000123 87.0
PJD1_k127_1480589_66 Metal-sensitive transcriptional repressor - - - 0.00000000000000003088 83.0
PJD1_k127_1480589_67 Acetyltransferase (GNAT) domain - - - 0.000000000000003307 83.0
PJD1_k127_1480589_68 regulation of translation K03530 - - 0.000000000000008505 77.0
PJD1_k127_1480589_69 Uncharacterized conserved protein (DUF2196) - - - 0.00000000000001256 75.0
PJD1_k127_1480589_7 Catalyzes the irreversible beta-carboxylation of phosphoenolpyruvate (PEP) to form oxaloacetate (OAA), a four- carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005051 463.0
PJD1_k127_1480589_70 PFAM blue (type 1) copper domain protein - - - 0.00000000000001334 80.0
PJD1_k127_1480589_71 Protein of unknown function (DUF4446) - - - 0.00000000000002356 79.0
PJD1_k127_1480589_72 transcriptional regulators K19591 - - 0.0000000000002262 76.0
PJD1_k127_1480589_73 acetyltransferase K18816 - 2.3.1.82 0.0000000000002573 75.0
PJD1_k127_1480589_74 spore germination K08978 - - 0.000000000002639 77.0
PJD1_k127_1480589_75 Pilus assembly protein PilX - - - 0.00000000001999 76.0
PJD1_k127_1480589_76 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000003415 66.0
PJD1_k127_1480589_77 membrane protein (DUF2078) K08982 - - 0.0000000002409 63.0
PJD1_k127_1480589_79 Acetyltransferase (GNAT) domain - - - 0.000000002169 64.0
PJD1_k127_1480589_8 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 449.0
PJD1_k127_1480589_80 O-Antigen ligase - - - 0.000000002321 69.0
PJD1_k127_1480589_81 pilus assembly protein K02662 - - 0.000000005311 68.0
PJD1_k127_1480589_82 membrane K00389 - - 0.00000001104 61.0
PJD1_k127_1480589_83 energy transducer activity K02519,K03832 - - 0.00000001216 67.0
PJD1_k127_1480589_84 ABC-2 family transporter protein K01992 - - 0.00000001423 65.0
PJD1_k127_1480589_85 Acetyltransferase (GNAT) domain - - - 0.00000002735 61.0
PJD1_k127_1480589_86 Uncharacterized ACR, COG1430 K09005 - - 0.00000005856 57.0
PJD1_k127_1480589_87 - - - - 0.00000006473 55.0
PJD1_k127_1480589_88 Prokaryotic N-terminal methylation motif - - - 0.000000373 63.0
PJD1_k127_1480589_89 Belongs to the LOG family - - - 0.0000008154 56.0
PJD1_k127_1480589_9 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 382.0
PJD1_k127_1480589_90 EamA-like transporter family - - - 0.000002605 59.0
PJD1_k127_1480589_92 Belongs to the UPF0235 family K09131 - - 0.00001815 49.0
PJD1_k127_1480589_93 Protein of unknown function (DUF1559) - - - 0.00003278 52.0
PJD1_k127_1480589_94 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00004516 53.0
PJD1_k127_1480589_95 Pfam:N_methyl_2 - - - 0.00005327 53.0
PJD1_k127_1480589_96 PD-(D/E)XK nuclease superfamily K03657 - 3.6.4.12 0.0001072 53.0
PJD1_k127_1480589_97 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0002762 46.0
PJD1_k127_1480589_98 deoxyribonucleoside 5'-monophosphate N-glycosidase activity - GO:0001558,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009123,GO:0009125,GO:0009159,GO:0009162,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0030307,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040008,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045927,GO:0046434,GO:0046483,GO:0046700,GO:0046983,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0055086,GO:0065007,GO:0070694,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 0.0002928 51.0
PJD1_k127_1480589_99 Cysteine-rich secretory protein family - - - 0.0003012 51.0
PJD1_k127_149231_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 470.0
PJD1_k127_149231_1 involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001141 276.0
PJD1_k127_149231_10 Methyltransferase domain - - - 0.00000000000000000000000008017 115.0
PJD1_k127_149231_11 glycosyl transferase family - - - 0.0000000000000000000000003403 123.0
PJD1_k127_149231_12 ubiE/COQ5 methyltransferase family - - - 0.000000000004682 76.0
PJD1_k127_149231_14 Polysaccharide biosynthesis protein - - - 0.0000002203 63.0
PJD1_k127_149231_15 LamG domain protein jellyroll fold domain protein - - - 0.000001805 59.0
PJD1_k127_149231_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002628 237.0
PJD1_k127_149231_3 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000008915 209.0
PJD1_k127_149231_4 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000001453 199.0
PJD1_k127_149231_5 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000002147 206.0
PJD1_k127_149231_6 glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000000000000001417 186.0
PJD1_k127_149231_8 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000001087 163.0
PJD1_k127_149231_9 Bacterial transferase hexapeptide (three repeats) K00661 - 2.3.1.79 0.00000000000000000000000000000000000134 147.0
PJD1_k127_1567736_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 7.16e-201 634.0
PJD1_k127_1567736_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 598.0
PJD1_k127_1567736_10 PFAM phosphoesterase, RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000003627 114.0
PJD1_k127_1567736_11 PFAM CBS domain - - - 0.0000000000000000000003744 102.0
PJD1_k127_1567736_12 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000002621 89.0
PJD1_k127_1567736_13 reversible hydration of carbon dioxide - - - 0.00000000000002195 77.0
PJD1_k127_1567736_14 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000004779 82.0
PJD1_k127_1567736_15 Dolichyl-phosphate-mannose-protein mannosyltransferase K00728 - 2.4.1.109 0.000000002909 70.0
PJD1_k127_1567736_16 - - - - 0.00000002445 66.0
PJD1_k127_1567736_17 GtrA family K00721,K00786 - 2.4.1.83 0.0002902 53.0
PJD1_k127_1567736_18 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0004867 48.0
PJD1_k127_1567736_19 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.0005206 47.0
PJD1_k127_1567736_2 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000006101 260.0
PJD1_k127_1567736_20 ATP synthase B/B' CF(0) K02109 - - 0.0005888 47.0
PJD1_k127_1567736_3 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000003712 213.0
PJD1_k127_1567736_4 Efflux ABC transporter, permease protein K02004 - - 0.000000000000000000000000000000000000000000000000000000004344 209.0
PJD1_k127_1567736_5 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000000000000000000000000000000000000000000000001007 198.0
PJD1_k127_1567736_6 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000002211 196.0
PJD1_k127_1567736_7 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000004051 195.0
PJD1_k127_1567736_8 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000006201 184.0
PJD1_k127_1567736_9 dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity - - - 0.000000000000000000000000000000000000000001952 170.0
PJD1_k127_160254_0 Anticodon-binding domain of tRNA K01870 - 6.1.1.5 8.907e-290 921.0
PJD1_k127_160254_1 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009345,GO:0009987,GO:0010467,GO:0016070,GO:0016594,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042165,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 479.0
PJD1_k127_160254_10 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006487 318.0
PJD1_k127_160254_11 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 299.0
PJD1_k127_160254_12 Belongs to the SEDS family K03588 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001553 282.0
PJD1_k127_160254_13 zinc ion binding K06885,K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001154 264.0
PJD1_k127_160254_14 PFAM aminotransferase, class IV K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000007004 237.0
PJD1_k127_160254_15 Peptidoglycan polymerase that is essential for cell wall elongation K05837 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008360,GO:0016020,GO:0022603,GO:0022604,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000009557 217.0
PJD1_k127_160254_16 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000005349 207.0
PJD1_k127_160254_17 Glycosyl hydrolases family 18 - - - 0.00000000000000000000000000000000000000000000000000000824 202.0
PJD1_k127_160254_18 Mur ligase family, glutamate ligase domain K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000005442 207.0
PJD1_k127_160254_19 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000002508 196.0
PJD1_k127_160254_2 Large extracellular alpha-helical protein K06894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004842 457.0
PJD1_k127_160254_20 Bacterial sugar transferase - - - 0.0000000000000000000000000000000000000000000000004492 183.0
PJD1_k127_160254_21 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000194 189.0
PJD1_k127_160254_22 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.8.13 0.0000000000000000000000000000000000000000007813 170.0
PJD1_k127_160254_23 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000004183 163.0
PJD1_k127_160254_24 TIGRFAM signal peptidase I, bacterial type K03100 - 3.4.21.89 0.0000000000000000000000000000000000002571 147.0
PJD1_k127_160254_25 mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000507 153.0
PJD1_k127_160254_26 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000002164 159.0
PJD1_k127_160254_27 Methicillin resistance protein K05363,K11693 - 2.3.2.10,2.3.2.16 0.00000000000000000000000000000000000281 150.0
PJD1_k127_160254_28 Glycosyl transferase family group 2 - - - 0.0000000000000000000000000000000001077 147.0
PJD1_k127_160254_29 NADH pyrophosphatase activity K01519,K18532 GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006193,GO:0006195,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0008828,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009150,GO:0009154,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009205,GO:0009207,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009259,GO:0009261,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035870,GO:0036217,GO:0036218,GO:0036219,GO:0036220,GO:0036221,GO:0036222,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046041,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0047840,GO:0050896,GO:0051276,GO:0051716,GO:0055086,GO:0071704,GO:0071840,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 2.7.4.3 0.00000000000000000000000000000001906 133.0
PJD1_k127_160254_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0030428,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 395.0
PJD1_k127_160254_30 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000002312 140.0
PJD1_k127_160254_31 Protein of unknown function (DUF4012) - - - 0.000000000000000000000000000278 132.0
PJD1_k127_160254_32 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000279 113.0
PJD1_k127_160254_33 Alpha/beta hydrolase family - - - 0.0000000000000000000000002092 115.0
PJD1_k127_160254_34 Belongs to the PEP-utilizing enzyme family K01006,K01007 - 2.7.9.1,2.7.9.2 0.000000000000000000000002538 113.0
PJD1_k127_160254_35 PFAM Polysaccharide deacetylase - - - 0.00000000000000000000002236 110.0
PJD1_k127_160254_36 Polymer-forming cytoskeletal - - - 0.0000000000000000000005029 109.0
PJD1_k127_160254_37 PFAM Polysaccharide deacetylase - - - 0.000000000000000000001497 104.0
PJD1_k127_160254_38 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000001541 101.0
PJD1_k127_160254_39 Memo-like protein K06990 - - 0.00000000000000000008535 100.0
PJD1_k127_160254_4 Penicillin-binding Protein dimerisation domain K03587,K08384 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 360.0
PJD1_k127_160254_40 Phospholipid methyltransferase - - - 0.0000000000000000002698 94.0
PJD1_k127_160254_41 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000118 87.0
PJD1_k127_160254_42 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000001799 86.0
PJD1_k127_160254_43 Belongs to the HAM1 NTPase family K02428 - 3.6.1.66 0.00000000000000001857 97.0
PJD1_k127_160254_44 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000007047 75.0
PJD1_k127_160254_45 response regulator, receiver - - - 0.00000003359 62.0
PJD1_k127_160254_46 COG2335, Secreted and surface protein containing fasciclin-like repeats - - - 0.00000005882 61.0
PJD1_k127_160254_47 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008757,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0010340,GO:0016053,GO:0016740,GO:0016741,GO:0016787,GO:0016788,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032259,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0052689,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.197 0.00000726 56.0
PJD1_k127_160254_48 Glycosyl transferases group 1 - - - 0.00008879 48.0
PJD1_k127_160254_49 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000466 53.0
PJD1_k127_160254_5 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004199 357.0
PJD1_k127_160254_6 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 340.0
PJD1_k127_160254_7 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007273 334.0
PJD1_k127_160254_8 Mur ligase family, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 336.0
PJD1_k127_160254_9 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 322.0
PJD1_k127_1613339_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 3.841e-262 836.0
PJD1_k127_1613339_1 Glycosyl hydrolases family 15 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 597.0
PJD1_k127_1613339_10 Starch synthase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 340.0
PJD1_k127_1613339_11 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009176 322.0
PJD1_k127_1613339_12 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009547 328.0
PJD1_k127_1613339_13 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 306.0
PJD1_k127_1613339_14 Subtilase family K08651 - 3.4.21.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 299.0
PJD1_k127_1613339_15 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005198 295.0
PJD1_k127_1613339_16 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004107 287.0
PJD1_k127_1613339_17 Nucleotidyl transferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000008334 267.0
PJD1_k127_1613339_18 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000008817 238.0
PJD1_k127_1613339_19 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000001177 258.0
PJD1_k127_1613339_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003648 524.0
PJD1_k127_1613339_20 ATP-citrate synthase alpha chain protein K01648 GO:0003674,GO:0003824,GO:0003878,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006084,GO:0006085,GO:0006139,GO:0006163,GO:0006164,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009346,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046394,GO:0046483,GO:0046912,GO:0051186,GO:0051188,GO:0055086,GO:0071616,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.3.3.8 0.00000000000000000000000000000000000000000000000000000000000008639 227.0
PJD1_k127_1613339_21 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000002201 221.0
PJD1_k127_1613339_22 prohibitin homologues K07192 - - 0.000000000000000000000000000000000000000000000000000002399 211.0
PJD1_k127_1613339_23 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000181 170.0
PJD1_k127_1613339_24 Peptidyl-prolyl cis-trans K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000002928 151.0
PJD1_k127_1613339_25 Ribonuclease H-like K09776 - - 0.000000000000000000000000000000000000003656 154.0
PJD1_k127_1613339_26 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000002691 140.0
PJD1_k127_1613339_27 PFAM glycosyl transferase family 39 - - - 0.000000000000000000000000000000003068 146.0
PJD1_k127_1613339_28 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000001156 132.0
PJD1_k127_1613339_29 Cysteine-rich secretory protein family - - - 0.0000000000000000000000000003416 126.0
PJD1_k127_1613339_3 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 509.0
PJD1_k127_1613339_30 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000001794 108.0
PJD1_k127_1613339_31 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.0000000000000000000001925 102.0
PJD1_k127_1613339_32 Methicillin resistance protein - - - 0.0000000000000000000003295 107.0
PJD1_k127_1613339_33 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000003071 95.0
PJD1_k127_1613339_34 PFAM VanZ family protein - - - 0.000000000000000004255 90.0
PJD1_k127_1613339_35 membrane-bound metal-dependent K07038 - - 0.00000000000001209 81.0
PJD1_k127_1613339_36 PFAM Glycosyl transferase family 2 K07011,K11936 - - 0.00000000000001432 80.0
PJD1_k127_1613339_37 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000417 79.0
PJD1_k127_1613339_38 Universal bacterial protein YeaZ K14742 - - 0.000000000007102 69.0
PJD1_k127_1613339_39 Psort location Extracellular, score K21471 - - 0.00000001411 66.0
PJD1_k127_1613339_4 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261,K00262 - 1.4.1.2,1.4.1.3,1.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007477 412.0
PJD1_k127_1613339_40 - - - - 0.0000004117 59.0
PJD1_k127_1613339_41 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.00026 51.0
PJD1_k127_1613339_42 COG3764 Sortase (surface protein transpeptidase) K07284 - 3.4.22.70 0.000417 49.0
PJD1_k127_1613339_43 Esterase-like activity of phytase - - - 0.0007534 50.0
PJD1_k127_1613339_5 PFAM NAD dependent epimerase dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009448 408.0
PJD1_k127_1613339_6 transferase activity, transferring glycosyl groups K19003,K20327 - 2.4.1.336 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 437.0
PJD1_k127_1613339_7 TIGRFAM Glucose-1-phosphate cytidylyltransferase K00978 - 2.7.7.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003992 384.0
PJD1_k127_1613339_8 Male sterility protein K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 388.0
PJD1_k127_1613339_9 ATP-citrate synthase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA in many tissues K01648 GO:0000166,GO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003878,GO:0005488,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005886,GO:0006066,GO:0006082,GO:0006084,GO:0006085,GO:0006101,GO:0006107,GO:0006139,GO:0006163,GO:0006164,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006694,GO:0006695,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008144,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008610,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009346,GO:0009893,GO:0009987,GO:0012505,GO:0015936,GO:0016020,GO:0016053,GO:0016125,GO:0016126,GO:0016192,GO:0016740,GO:0016746,GO:0016999,GO:0017076,GO:0017144,GO:0018130,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030141,GO:0030554,GO:0031323,GO:0031325,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032940,GO:0032991,GO:0033500,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0034774,GO:0035337,GO:0035383,GO:0035384,GO:0035578,GO:0035639,GO:0036094,GO:0036230,GO:0042119,GO:0042582,GO:0042592,GO:0042593,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046165,GO:0046390,GO:0046394,GO:0046483,GO:0046903,GO:0046912,GO:0046949,GO:0048518,GO:0048522,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0055086,GO:0060205,GO:0065007,GO:0065008,GO:0070013,GO:0071616,GO:0071704,GO:0071944,GO:0072330,GO:0072350,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:0097708,GO:0099503,GO:0101002,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1904813 2.3.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009882 366.0
PJD1_k127_1620347_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.4.21.53 1.737e-234 750.0
PJD1_k127_1620347_1 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 506.0
PJD1_k127_1620347_10 TIGRFAM methionine-R-sulfoxide reductase K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000004142 172.0
PJD1_k127_1620347_11 PAS fold - - - 0.00000000000000000000000000000000000000000005978 178.0
PJD1_k127_1620347_12 - - - - 0.0000000000000000000000000000000000000000001314 173.0
PJD1_k127_1620347_13 PFAM metal-dependent phosphohydrolase, HD sub domain K06951 - - 0.0000000000000000000000000000000000000002378 156.0
PJD1_k127_1620347_14 metal-binding protein - - - 0.000000000000000000000000000000000001967 147.0
PJD1_k127_1620347_15 Pep-cterm family integral membrane protein - - - 0.000000000000000000000000000000001698 151.0
PJD1_k127_1620347_16 - - - - 0.00000000000000000000000000000002548 132.0
PJD1_k127_1620347_17 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000008615 130.0
PJD1_k127_1620347_18 PFAM Phosphoglycerate mutase K22305 - 3.1.3.3 0.0000000000000000000000000000003918 130.0
PJD1_k127_1620347_19 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.000000000000000000000000000002199 134.0
PJD1_k127_1620347_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004171 490.0
PJD1_k127_1620347_20 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000002837 125.0
PJD1_k127_1620347_21 PFAM 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.00000000000000000000001997 111.0
PJD1_k127_1620347_22 Transglycosylase associated protein - - - 0.0000000000000000000002689 98.0
PJD1_k127_1620347_23 DEAD DEAH box helicase domain protein K06877 - - 0.000000000000000000001584 102.0
PJD1_k127_1620347_24 Diacylglycerol kinase K00887,K00901 - 2.7.1.107,2.7.1.66 0.000000000000000000007513 96.0
PJD1_k127_1620347_25 cheY-homologous receiver domain - - - 0.000000000000000003233 89.0
PJD1_k127_1620347_26 PFAM Bacterial regulatory protein, arsR family K03892 - - 0.00000000000000005034 84.0
PJD1_k127_1620347_27 SNARE associated Golgi protein - - - 0.0000000000006109 78.0
PJD1_k127_1620347_28 Psort location CytoplasmicMembrane, score K19302 - 3.6.1.27 0.000000000001011 74.0
PJD1_k127_1620347_29 lactate/malate dehydrogenase, NAD binding domain - - - 0.0000000007634 72.0
PJD1_k127_1620347_3 seryl-tRNA aminoacylation K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 468.0
PJD1_k127_1620347_30 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000001385 67.0
PJD1_k127_1620347_31 - - - - 0.00000001492 64.0
PJD1_k127_1620347_32 copper amine - - - 0.000001034 61.0
PJD1_k127_1620347_33 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.000001518 61.0
PJD1_k127_1620347_34 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.00005102 52.0
PJD1_k127_1620347_35 Acyltransferase K00655 - 2.3.1.51 0.0003077 52.0
PJD1_k127_1620347_4 flavodoxin reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000111 268.0
PJD1_k127_1620347_5 ubiE/COQ5 methyltransferase family K00574,K07755 - 2.1.1.137,2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000008781 262.0
PJD1_k127_1620347_6 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000008891 230.0
PJD1_k127_1620347_7 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP) K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000004262 198.0
PJD1_k127_1620347_8 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000000000000000000000000002762 195.0
PJD1_k127_1620347_9 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000002222 184.0
PJD1_k127_1840200_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008095 522.0
PJD1_k127_1840200_1 GTP-binding protein K06944 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009311 316.0
PJD1_k127_1840200_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000563 132.0
PJD1_k127_1840200_3 Cell envelope-related transcriptional attenuator domain - - - 0.00001154 57.0
PJD1_k127_1840200_4 Protein of unknown function (DUF2817) - - - 0.00001985 54.0
PJD1_k127_1840200_5 PFAM Resolvase, N-terminal - - - 0.00005724 46.0
PJD1_k127_1840200_6 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.0002612 52.0
PJD1_k127_1840200_7 - - - - 0.0004424 45.0
PJD1_k127_1849411_0 Belongs to the RNA methyltransferase TrmD family K00554,K01770 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000287 280.0
PJD1_k127_1849411_1 lipoprotein transporter activity K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000001491 239.0
PJD1_k127_1849411_10 PFAM Glycosyl transferase family 2 - - - 0.0006704 50.0
PJD1_k127_1849411_2 oligosaccharyl transferase activity K19003,K20327 - 2.4.1.336 0.000000000000000000000000000000000000000000000000000000000000001228 239.0
PJD1_k127_1849411_3 PFAM glycosidase, PH1107-related - - - 0.0000000000000000000000000000000000000002676 164.0
PJD1_k127_1849411_4 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000001628 136.0
PJD1_k127_1849411_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000005193 98.0
PJD1_k127_1849411_6 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.0000000000000002207 85.0
PJD1_k127_1849411_7 Sortase family K07284 - 3.4.22.70 0.000001692 57.0
PJD1_k127_1849411_8 chondroitin sulfate binding K05695,K06777,K06778,K19599 GO:0000003,GO:0000902,GO:0000904,GO:0001558,GO:0001654,GO:0001667,GO:0001745,GO:0001751,GO:0001754,GO:0001817,GO:0001818,GO:0001885,GO:0002064,GO:0002065,GO:0002066,GO:0002682,GO:0002683,GO:0003006,GO:0003158,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0004888,GO:0005001,GO:0005488,GO:0005515,GO:0005539,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005887,GO:0005912,GO:0005924,GO:0005925,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006935,GO:0007154,GO:0007162,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007297,GO:0007399,GO:0007409,GO:0007411,GO:0007412,GO:0007416,GO:0007417,GO:0007420,GO:0007423,GO:0007528,GO:0008021,GO:0008045,GO:0008150,GO:0008152,GO:0008201,GO:0008361,GO:0008594,GO:0009605,GO:0009653,GO:0009887,GO:0009888,GO:0009925,GO:0009966,GO:0009968,GO:0009987,GO:0010631,GO:0010646,GO:0010648,GO:0010721,GO:0010769,GO:0010771,GO:0010975,GO:0010977,GO:0012505,GO:0012506,GO:0014069,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016311,GO:0016323,GO:0016477,GO:0016787,GO:0016788,GO:0016791,GO:0019198,GO:0019538,GO:0019904,GO:0019953,GO:0021510,GO:0021537,GO:0021543,GO:0021549,GO:0021761,GO:0021766,GO:0021987,GO:0022008,GO:0022037,GO:0022038,GO:0022407,GO:0022408,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030054,GO:0030055,GO:0030133,GO:0030154,GO:0030155,GO:0030182,GO:0030285,GO:0030308,GO:0030424,GO:0030516,GO:0030517,GO:0030658,GO:0030659,GO:0030672,GO:0030707,GO:0030855,GO:0030900,GO:0030902,GO:0031090,GO:0031175,GO:0031224,GO:0031226,GO:0031252,GO:0031290,GO:0031300,GO:0031301,GO:0031344,GO:0031345,GO:0031346,GO:0031347,GO:0031410,GO:0031982,GO:0032093,GO:0032101,GO:0032102,GO:0032279,GO:0032479,GO:0032480,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032647,GO:0032648,GO:0032687,GO:0032688,GO:0032879,GO:0032989,GO:0032990,GO:0034121,GO:0034122,GO:0034163,GO:0034164,GO:0035335,GO:0035374,GO:0036211,GO:0038023,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0042051,GO:0042221,GO:0042330,GO:0042461,GO:0042462,GO:0042578,GO:0042802,GO:0042803,GO:0042995,GO:0043005,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043394,GO:0043395,GO:0043412,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044464,GO:0044703,GO:0045088,GO:0045178,GO:0045202,GO:0045211,GO:0045446,GO:0045466,GO:0045467,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0045926,GO:0046530,GO:0046983,GO:0048232,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048588,GO:0048589,GO:0048592,GO:0048609,GO:0048638,GO:0048640,GO:0048666,GO:0048667,GO:0048670,GO:0048671,GO:0048675,GO:0048679,GO:0048681,GO:0048699,GO:0048731,GO:0048749,GO:0048812,GO:0048841,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050767,GO:0050768,GO:0050770,GO:0050771,GO:0050773,GO:0050776,GO:0050789,GO:0050793,GO:0050794,GO:0050808,GO:0050896,GO:0050920,GO:0051093,GO:0051124,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051239,GO:0051241,GO:0051270,GO:0051489,GO:0051491,GO:0051674,GO:0051704,GO:0051716,GO:0051960,GO:0051961,GO:0060089,GO:0060269,GO:0060284,GO:0060322,GO:0060429,GO:0060491,GO:0060560,GO:0060998,GO:0061000,GO:0061028,GO:0061387,GO:0061564,GO:0065007,GO:0065008,GO:0070161,GO:0070382,GO:0070570,GO:0070571,GO:0071704,GO:0071840,GO:0071944,GO:0080134,GO:0080135,GO:0090066,GO:0090130,GO:0090132,GO:0090557,GO:0090596,GO:0097060,GO:0097367,GO:0097458,GO:0097485,GO:0097708,GO:0098563,GO:0098588,GO:0098590,GO:0098793,GO:0098794,GO:0098805,GO:0098839,GO:0098936,GO:0098948,GO:0098984,GO:0099055,GO:0099060,GO:0099061,GO:0099146,GO:0099240,GO:0099501,GO:0099503,GO:0099572,GO:0099634,GO:0099699,GO:0120025,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:0120039,GO:0140096,GO:1901564,GO:1901681,GO:1902667,GO:1903034,GO:1903035,GO:1903385,GO:1903386,GO:1990138,GO:2000026,GO:2000171 3.1.3.48 0.0002084 52.0
PJD1_k127_1849411_9 - - - - 0.0002512 53.0
PJD1_k127_2052197_0 PFAM Transposase domain (DUF772) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 355.0
PJD1_k127_2607755_0 radicals which are normally produced within the cells and which are toxic to biological systems K04564 GO:0005575,GO:0005576 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000004585 254.0
PJD1_k127_2607755_1 Uncharacterised protein family UPF0047 - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000001246 133.0
PJD1_k127_2607755_2 radical SAM domain protein K03424 - - 0.000000000000000000000000001867 115.0
PJD1_k127_2607755_3 GlcNAc-PI de-N-acetylase K22135 - - 0.00000000000000000001357 100.0
PJD1_k127_2607755_4 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins K07533 - 5.2.1.8 0.00000000000133 76.0
PJD1_k127_2711273_0 K -dependent Na Ca exchanger K07301 - - 0.00000000000000000001421 103.0
PJD1_k127_2711273_1 - K03657 - 3.6.4.12 0.0000000000000001699 81.0
PJD1_k127_2711273_2 dna ligase K10747 GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.000000001287 59.0
PJD1_k127_2917657_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.051e-263 838.0
PJD1_k127_2917657_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.44e-209 670.0
PJD1_k127_2917657_10 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006097 354.0
PJD1_k127_2917657_11 S-adenosylmethionine synthetase, C-terminal domain K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 339.0
PJD1_k127_2917657_12 Heavy metal tolerance protein K05661 GO:0000041,GO:0000166,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006857,GO:0006950,GO:0007034,GO:0008144,GO:0008150,GO:0009636,GO:0009987,GO:0010035,GO:0010038,GO:0015399,GO:0015405,GO:0015440,GO:0015711,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030001,GO:0030554,GO:0031090,GO:0031166,GO:0031224,GO:0031300,GO:0031301,GO:0031310,GO:0032553,GO:0032555,GO:0032559,GO:0033220,GO:0034220,GO:0034486,GO:0034635,GO:0034775,GO:0035443,GO:0035639,GO:0035672,GO:0036094,GO:0036246,GO:0036249,GO:0042221,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0042939,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044604,GO:0046686,GO:0050896,GO:0051179,GO:0051181,GO:0051234,GO:0051716,GO:0055085,GO:0061687,GO:0070887,GO:0071241,GO:0071248,GO:0071276,GO:0071585,GO:0071627,GO:0071628,GO:0071702,GO:0071705,GO:0071993,GO:0071994,GO:0071995,GO:0071996,GO:0072337,GO:0072348,GO:0097159,GO:0097237,GO:0097367,GO:0097501,GO:0098588,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:0098754,GO:0098805,GO:0098849,GO:0098852,GO:1901265,GO:1901363,GO:1904680,GO:1990170,GO:1990748 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 349.0
PJD1_k127_2917657_13 B3/4 domain K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007515 338.0
PJD1_k127_2917657_14 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 313.0
PJD1_k127_2917657_15 peptidase M29 aminopeptidase II K19689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 303.0
PJD1_k127_2917657_16 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006146 280.0
PJD1_k127_2917657_17 Glycosyl hydrolases family 15 K07190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002321 274.0
PJD1_k127_2917657_18 PFAM Bacterial type II secretion system protein F domain K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002276 270.0
PJD1_k127_2917657_19 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003271 259.0
PJD1_k127_2917657_2 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 608.0
PJD1_k127_2917657_20 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000007856 255.0
PJD1_k127_2917657_21 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000092 252.0
PJD1_k127_2917657_22 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000581 222.0
PJD1_k127_2917657_23 Asp/Glu/Hydantoin racemase K01779 - 5.1.1.13 0.00000000000000000000000000000000000000000000000000000000000008936 222.0
PJD1_k127_2917657_24 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000008392 201.0
PJD1_k127_2917657_25 Tyrosine recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000006962 204.0
PJD1_k127_2917657_26 Peptidase M28 - - - 0.00000000000000000000000000000000000000000000000000001396 214.0
PJD1_k127_2917657_27 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000001393 193.0
PJD1_k127_2917657_28 Mg2 transporter protein CorA family protein K03284 - - 0.000000000000000000000000000000000000000000000007241 183.0
PJD1_k127_2917657_29 PFAM Peptidase M19, renal dipeptidase K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000002526 184.0
PJD1_k127_2917657_3 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 567.0
PJD1_k127_2917657_30 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000001903 168.0
PJD1_k127_2917657_31 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000000000003658 161.0
PJD1_k127_2917657_32 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000004696 161.0
PJD1_k127_2917657_33 Alpha/beta hydrolase of unknown function (DUF1100) - - - 0.00000000000000000000000000000000000002296 156.0
PJD1_k127_2917657_34 pilus assembly protein K02662 - - 0.00000000000000000000000000000000000003686 156.0
PJD1_k127_2917657_35 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000001261 140.0
PJD1_k127_2917657_36 integral membrane protein - - - 0.00000000000000000000000000000007955 139.0
PJD1_k127_2917657_37 Tetratricopeptide repeat - - - 0.00000000000000000000000000000186 129.0
PJD1_k127_2917657_38 Methyltransferase domain - - - 0.000000000000000000000000000002733 130.0
PJD1_k127_2917657_39 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000003245 114.0
PJD1_k127_2917657_4 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 542.0
PJD1_k127_2917657_41 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000004688 92.0
PJD1_k127_2917657_42 Belongs to the phosphoglycerate mutase family - - - 0.00000000000000002596 89.0
PJD1_k127_2917657_43 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000000000000000441 82.0
PJD1_k127_2917657_44 - - - - 0.0000000000001386 78.0
PJD1_k127_2917657_46 - - - - 0.00000000002073 72.0
PJD1_k127_2917657_47 - - - - 0.00000000003912 72.0
PJD1_k127_2917657_48 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000004552 66.0
PJD1_k127_2917657_49 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.0000000001 70.0
PJD1_k127_2917657_5 PFAM glycosyl transferase, family 51 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005848 503.0
PJD1_k127_2917657_50 Prokaryotic N-terminal methylation motif K02456,K02650 - - 0.000000002825 65.0
PJD1_k127_2917657_51 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.00000001129 57.0
PJD1_k127_2917657_52 prepilin-type N-terminal cleavage methylation domain K02456,K02650 - - 0.00000005927 61.0
PJD1_k127_2917657_53 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000001242 59.0
PJD1_k127_2917657_54 - - - - 0.0000002232 55.0
PJD1_k127_2917657_55 Belongs to the UPF0109 family K06960 - - 0.000000713 53.0
PJD1_k127_2917657_56 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - 0.0000007538 59.0
PJD1_k127_2917657_57 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000008305 54.0
PJD1_k127_2917657_58 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000001192 59.0
PJD1_k127_2917657_59 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000008958 57.0
PJD1_k127_2917657_6 Type II IV secretion system protein K02454,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 467.0
PJD1_k127_2917657_60 G5 K21688 GO:0005575,GO:0005576,GO:0008150,GO:0009892,GO:0009893,GO:0010468,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019222,GO:0022611,GO:0032502,GO:0040008,GO:0040009,GO:0040010,GO:0044111,GO:0044114,GO:0044115,GO:0044403,GO:0044419,GO:0045927,GO:0048518,GO:0048519,GO:0050789,GO:0051704,GO:0060255,GO:0065007,GO:0085016 - 0.00001303 55.0
PJD1_k127_2917657_61 Prokaryotic N-terminal methylation motif - - - 0.00002238 53.0
PJD1_k127_2917657_62 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0001299 53.0
PJD1_k127_2917657_63 TIGRFAM prepilin-type N-terminal cleavage methylation domain - - - 0.0008496 48.0
PJD1_k127_2917657_64 - - - - 0.0008714 46.0
PJD1_k127_2917657_7 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 452.0
PJD1_k127_2917657_8 PFAM Peptidase family M20 M25 M40 K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007766 407.0
PJD1_k127_2917657_9 PFAM TrkA-N domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 374.0
PJD1_k127_2944486_0 manually curated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001984 266.0
PJD1_k127_3355814_0 PFAM PHP domain K02347 - - 0.0000000000000000000000000000000001726 137.0
PJD1_k127_3355814_1 LemA family K03744 - - 0.000000000000000000000000000001806 127.0
PJD1_k127_3372692_0 Transposase (IS116 IS110 IS902 family) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 303.0
PJD1_k127_3372692_1 PFAM Glycosyl transferase, group 1 - - - 0.000000000000001327 79.0
PJD1_k127_3388135_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 454.0
PJD1_k127_3388135_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 382.0
PJD1_k127_3388135_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001147 250.0
PJD1_k127_3388135_3 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000005985 200.0
PJD1_k127_357258_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 6.689e-223 720.0
PJD1_k127_357258_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 528.0
PJD1_k127_357258_10 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008784 283.0
PJD1_k127_357258_11 Filamentation induced by cAMP protein fic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004387 270.0
PJD1_k127_357258_12 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004536 265.0
PJD1_k127_357258_13 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000003599 248.0
PJD1_k127_357258_14 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000001372 214.0
PJD1_k127_357258_15 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000004269 208.0
PJD1_k127_357258_16 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.0000000000000000000000000000000000000000000000002592 190.0
PJD1_k127_357258_17 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000001823 165.0
PJD1_k127_357258_18 Cob(I)yrinic acid a c-diamide adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000006263 154.0
PJD1_k127_357258_19 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000511 142.0
PJD1_k127_357258_2 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 494.0
PJD1_k127_357258_20 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.0000000000000000000000000000007488 132.0
PJD1_k127_357258_21 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000003228 122.0
PJD1_k127_357258_22 pfkB family carbohydrate kinase - - - 0.000000000000000000000000003461 123.0
PJD1_k127_357258_23 COG COG2367 Beta-lactamase class A Defense mechanisms K17836 - 3.5.2.6 0.00000000000000000000000001182 122.0
PJD1_k127_357258_24 t-RNA-binding domain protein K01874,K06878 - 6.1.1.10 0.00000000000000000000000002602 111.0
PJD1_k127_357258_25 cyclopropane-fatty-acyl-phospholipid synthase K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000001104 109.0
PJD1_k127_357258_26 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000004452 115.0
PJD1_k127_357258_27 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000009511 89.0
PJD1_k127_357258_28 - - - - 0.00000000005829 66.0
PJD1_k127_357258_29 CAAX protease self-immunity K07052 - - 0.000000000206 69.0
PJD1_k127_357258_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 465.0
PJD1_k127_357258_31 Ribonuclease HI K03469,K06993 - 3.1.26.4 0.00005332 52.0
PJD1_k127_357258_33 NUDIX domain - - - 0.0003264 50.0
PJD1_k127_357258_4 ATP dependent DNA ligase C terminal region K10747 GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 413.0
PJD1_k127_357258_5 Belongs to the class I fructose-bisphosphate aldolase family K01623 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 398.0
PJD1_k127_357258_6 PFAM aminoacyl-tRNA synthetase class Ib K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009451 373.0
PJD1_k127_357258_7 Transketolase, pyrimidine binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009706 359.0
PJD1_k127_357258_8 helicase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007304 355.0
PJD1_k127_357258_9 Dehydrogenase E1 component K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 316.0
PJD1_k127_3730816_0 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002867 256.0
PJD1_k127_3730816_1 PFAM metal-dependent phosphohydrolase HD sub domain K09163 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001697 254.0
PJD1_k127_3730816_10 Glycosyl hydrolase-like 10 - - - 0.0000002117 64.0
PJD1_k127_3730816_11 cellular component assembly K11447,K16531 GO:0000003,GO:0000086,GO:0000226,GO:0000242,GO:0000278,GO:0000281,GO:0000288,GO:0000291,GO:0000785,GO:0000910,GO:0000956,GO:0001085,GO:0001103,GO:0001654,GO:0001708,GO:0001750,GO:0001754,GO:0001764,GO:0001838,GO:0001841,GO:0001843,GO:0001894,GO:0001895,GO:0001917,GO:0001947,GO:0002009,GO:0003006,GO:0003007,GO:0003008,GO:0003013,GO:0003073,GO:0003085,GO:0003143,GO:0003352,GO:0003356,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005929,GO:0006139,GO:0006325,GO:0006401,GO:0006402,GO:0006464,GO:0006482,GO:0006725,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007098,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0007600,GO:0007606,GO:0007608,GO:0007610,GO:0008015,GO:0008064,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008214,GO:0008217,GO:0009056,GO:0009057,GO:0009506,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009892,GO:0009933,GO:0009934,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010564,GO:0010605,GO:0010629,GO:0010638,GO:0010639,GO:0012505,GO:0014020,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016331,GO:0016358,GO:0016462,GO:0016477,GO:0016569,GO:0016570,GO:0016577,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019216,GO:0019221,GO:0019222,GO:0019439,GO:0019538,GO:0019953,GO:0021537,GO:0021543,GO:0021544,GO:0021591,GO:0021756,GO:0021761,GO:0021766,GO:0021915,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030054,GO:0030154,GO:0030182,GO:0030534,GO:0030832,GO:0030833,GO:0030837,GO:0030900,GO:0031023,GO:0031090,GO:0031175,GO:0031253,GO:0031333,GO:0031344,GO:0031346,GO:0031410,GO:0031514,GO:0031667,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032095,GO:0032096,GO:0032098,GO:0032099,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032231,GO:0032271,GO:0032272,GO:0032391,GO:0032400,GO:0032401,GO:0032402,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032535,GO:0032870,GO:0032879,GO:0032886,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033059,GO:0033210,GO:0033365,GO:0034097,GO:0034260,GO:0034451,GO:0034452,GO:0034453,GO:0034454,GO:0034464,GO:0034504,GO:0034613,GO:0034641,GO:0034655,GO:0034708,GO:0035050,GO:0035097,GO:0035148,GO:0035176,GO:0035239,GO:0035295,GO:0035327,GO:0035845,GO:0035869,GO:0036064,GO:0036211,GO:0038108,GO:0040008,GO:0040011,GO:0040012,GO:0040014,GO:0040018,GO:0042221,GO:0042461,GO:0042462,GO:0042592,GO:0042995,GO:0043005,GO:0043009,GO:0043014,GO:0043086,GO:0043087,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043412,GO:0043473,GO:0043928,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044320,GO:0044321,GO:0044380,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044431,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0044666,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045165,GO:0045185,GO:0045444,GO:0045494,GO:0045724,GO:0045776,GO:0045927,GO:0046483,GO:0046530,GO:0046548,GO:0046700,GO:0046907,GO:0048232,GO:0048468,GO:0048487,GO:0048507,GO:0048509,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048532,GO:0048562,GO:0048568,GO:0048583,GO:0048585,GO:0048592,GO:0048598,GO:0048609,GO:0048638,GO:0048639,GO:0048646,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048871,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050893,GO:0050896,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051270,GO:0051276,GO:0051301,GO:0051302,GO:0051336,GO:0051346,GO:0051457,GO:0051492,GO:0051493,GO:0051494,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051651,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051705,GO:0051716,GO:0051726,GO:0051875,GO:0051904,GO:0051905,GO:0055044,GO:0055087,GO:0060170,GO:0060249,GO:0060255,GO:0060271,GO:0060295,GO:0060296,GO:0060322,GO:0060324,GO:0060429,GO:0060491,GO:0060562,GO:0060606,GO:0060612,GO:0060613,GO:0060632,GO:0061371,GO:0061448,GO:0061512,GO:0061640,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070076,GO:0070491,GO:0070727,GO:0070887,GO:0070925,GO:0070988,GO:0071310,GO:0071345,GO:0071495,GO:0071539,GO:0071557,GO:0071704,GO:0071840,GO:0071944,GO:0072175,GO:0072359,GO:0072393,GO:0072595,GO:0072698,GO:0080090,GO:0090066,GO:0090304,GO:0090596,GO:0097458,GO:0097499,GO:0097708,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098590,GO:0098791,GO:0110020,GO:0110053,GO:0120025,GO:0120031,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:1901360,GO:1901361,GO:1901564,GO:1901575,GO:1902017,GO:1902019,GO:1902115,GO:1902117,GO:1902494,GO:1902855,GO:1902903,GO:1902904,GO:1903047,GO:1903546,GO:1905508,GO:1905515,GO:1990234,GO:2000145 - 0.000001373 62.0
PJD1_k127_3730816_12 PFAM Uncharacterised BCR, COG1649 - - - 0.00009358 55.0
PJD1_k127_3730816_13 - - - - 0.0002165 55.0
PJD1_k127_3730816_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000006349 229.0
PJD1_k127_3730816_3 - - - - 0.000000000000000000000000000000000001848 146.0
PJD1_k127_3730816_4 Flavodoxin domain - - - 0.000000000000000000000000000000000004461 141.0
PJD1_k127_3730816_5 ISXO2-like transposase domain - - - 0.00000000000000000000000000001079 124.0
PJD1_k127_3730816_6 YGGT family - - - 0.00000000000000000000000000002806 121.0
PJD1_k127_3730816_7 cheY-homologous receiver domain - - - 0.00000000000000000000000002335 112.0
PJD1_k127_3730816_8 PFAM Transglycosylase associated protein - - - 0.00000000000000000000000308 104.0
PJD1_k127_3730816_9 - - - - 0.00000003155 67.0
PJD1_k127_3784399_0 MreB/Mbl protein K04043 - - 1.174e-235 745.0
PJD1_k127_3784399_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 2.481e-199 645.0
PJD1_k127_3784399_10 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000001088 108.0
PJD1_k127_3784399_11 Sortase (surface protein transpeptidase) K07284 - 3.4.22.70 0.000000000004334 75.0
PJD1_k127_3784399_12 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000001075 71.0
PJD1_k127_3784399_13 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000003865 68.0
PJD1_k127_3784399_14 Helix-turn-helix domain - - - 0.00003191 53.0
PJD1_k127_3784399_15 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0001944 45.0
PJD1_k127_3784399_2 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 527.0
PJD1_k127_3784399_3 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 501.0
PJD1_k127_3784399_4 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 476.0
PJD1_k127_3784399_5 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 355.0
PJD1_k127_3784399_6 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 307.0
PJD1_k127_3784399_7 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002378 274.0
PJD1_k127_3784399_8 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000002981 216.0
PJD1_k127_3784399_9 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000003465 191.0
PJD1_k127_4017466_0 TIGRFAM FeS assembly protein SufB K07033,K09014 - - 1.406e-212 670.0
PJD1_k127_4017466_1 Succinyl-CoA ligase like flavodoxin domain K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004296 500.0
PJD1_k127_4017466_10 EamA-like transporter family - - - 0.000000000000000000000000000000000000724 151.0
PJD1_k127_4017466_11 assembly protein SufD K07033,K09015 - - 0.0000000000000000000000000004166 121.0
PJD1_k127_4017466_12 SUF system FeS assembly protein, NifU family K04488 - - 0.00000000000000000000002608 105.0
PJD1_k127_4017466_13 - - - - 0.0000000000000000003487 96.0
PJD1_k127_4017466_14 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000004089 73.0
PJD1_k127_4017466_15 electron transfer activity K05337 - - 0.00000002334 61.0
PJD1_k127_4017466_16 carbon dioxide binding K04653,K04654 - - 0.00000008421 55.0
PJD1_k127_4017466_17 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00001236 56.0
PJD1_k127_4017466_18 Hep Hag repeat protein - - - 0.00001675 55.0
PJD1_k127_4017466_19 Hydrid cluster protein-associated redox disulfide domain protein - - - 0.00006125 48.0
PJD1_k127_4017466_2 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 432.0
PJD1_k127_4017466_3 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 392.0
PJD1_k127_4017466_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006024 384.0
PJD1_k127_4017466_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 317.0
PJD1_k127_4017466_6 ABC transporter K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000134 261.0
PJD1_k127_4017466_7 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001024 260.0
PJD1_k127_4017466_8 Nickel-dependent hydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002268 248.0
PJD1_k127_4017466_9 Nitroreductase family - - - 0.000000000000000000000000000000000000000006179 161.0
PJD1_k127_4084239_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 462.0
PJD1_k127_4084239_1 Interconversion of serine and glycine K00600 GO:0003674,GO:0003824,GO:0004372,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006520,GO:0006730,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016742,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 417.0
PJD1_k127_4084239_10 Glycosyltransferase like family 2 K20534 - - 0.0000000000000000000000000000000000000000000000000004211 196.0
PJD1_k127_4084239_11 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000007053 177.0
PJD1_k127_4084239_12 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000003969 152.0
PJD1_k127_4084239_13 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000001693 148.0
PJD1_k127_4084239_14 NUDIX domain - - - 0.0000000000000000000000000000002377 127.0
PJD1_k127_4084239_15 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000175 123.0
PJD1_k127_4084239_16 Predicted membrane protein (DUF2079) - - - 0.0000000000000000000000000522 123.0
PJD1_k127_4084239_17 PFAM Yqey-like protein K09117 - - 0.0000000000000000000000006745 109.0
PJD1_k127_4084239_18 histidine triad K02503 - - 0.000000000000000000007122 96.0
PJD1_k127_4084239_19 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000142 96.0
PJD1_k127_4084239_2 Anticodon binding domain K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005334 369.0
PJD1_k127_4084239_20 Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides K02759,K03478 - 2.7.1.196,2.7.1.205,3.5.1.105 0.0000000000000000007539 97.0
PJD1_k127_4084239_21 dTDP metabolic process K00943 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004550,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005759,GO:0005829,GO:0006139,GO:0006165,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008283,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010033,GO:0010154,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0022414,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0034641,GO:0034654,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046939,GO:0046940,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050145,GO:0050896,GO:0051716,GO:0055086,GO:0061458,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000007088 79.0
PJD1_k127_4084239_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000112 287.0
PJD1_k127_4084239_4 Uncharacterised protein family UPF0052 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002789 267.0
PJD1_k127_4084239_5 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000739 235.0
PJD1_k127_4084239_6 Diadenosine tetraphosphate - - - 0.000000000000000000000000000000000000000000000000000000000000000002063 229.0
PJD1_k127_4084239_7 zinc metalloprotease K04771,K11749,K16922 GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016021,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0040007,GO:0043170,GO:0043856,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0045152,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:0140110,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000002158 240.0
PJD1_k127_4084239_8 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000002117 228.0
PJD1_k127_4084239_9 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000008844 225.0
PJD1_k127_417951_0 - - - - 0.00000000000000000000000000000000000000000000000000000008944 201.0
PJD1_k127_417951_2 Metal-sensitive transcriptional repressor K21600 - - 0.0000000000000001982 81.0
PJD1_k127_420632_0 dihydrofolate reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 293.0
PJD1_k127_420632_1 glyoxalase III activity - - - 0.00000000000000000000000000000000000000000000000000000000228 203.0
PJD1_k127_420632_2 Protein of unknown function (DUF1428) - - - 0.000000000000000000000000000000003534 132.0
PJD1_k127_420632_3 Domain of unknown function (DU1801) - - - 0.000000000000000000000001481 108.0
PJD1_k127_420632_4 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000002867 107.0
PJD1_k127_420632_5 PFAM Abortive infection protein - - - 0.000000000000000000003051 103.0
PJD1_k127_420632_6 COG3209 Rhs family protein - - - 0.000000000000000000007043 108.0
PJD1_k127_420632_8 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00005155 48.0
PJD1_k127_420632_9 COG NOG23385 non supervised orthologous group - - - 0.0001472 51.0
PJD1_k127_4391861_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 618.0
PJD1_k127_4391861_1 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006188 388.0
PJD1_k127_4391861_10 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.00000000000000000000000000000006505 131.0
PJD1_k127_4391861_11 Mazg nucleotide pyrophosphohydrolase - - - 0.000000000000000000000000002615 119.0
PJD1_k127_4391861_12 O-Antigen ligase - - - 0.0000000001659 74.0
PJD1_k127_4391861_13 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.00000005072 57.0
PJD1_k127_4391861_14 peroxiredoxin activity - - - 0.0000008882 62.0
PJD1_k127_4391861_15 oxidoreductase activity K00505 - 1.14.18.1 0.00003613 50.0
PJD1_k127_4391861_16 Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5- phosphate and a purine or pyrimidine base - - - 0.0006682 47.0
PJD1_k127_4391861_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 327.0
PJD1_k127_4391861_3 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 309.0
PJD1_k127_4391861_4 DNA recombination-mediator protein A K03168,K04096 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000007224 258.0
PJD1_k127_4391861_5 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000008463 207.0
PJD1_k127_4391861_6 coenzyme F420-1:gamma-L-glutamate ligase activity K12234,K22099 - 6.3.2.12,6.3.2.17,6.3.2.31,6.3.2.34 0.000000000000000000000000000000000000000000000001133 183.0
PJD1_k127_4391861_7 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000003099 177.0
PJD1_k127_4391861_8 Peptidase M50 - - - 0.00000000000000000000000000000000000000003452 160.0
PJD1_k127_4391861_9 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000000000000184 150.0
PJD1_k127_4426044_0 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000003584 97.0
PJD1_k127_484761_0 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 419.0
PJD1_k127_4870391_0 PFAM Glycosyl transferase family 2 K00694 - 2.4.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008944 404.0
PJD1_k127_4870391_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 356.0
PJD1_k127_4870391_10 PhoQ Sensor - - - 0.00000000009662 70.0
PJD1_k127_4870391_2 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002536 287.0
PJD1_k127_4870391_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001419 258.0
PJD1_k127_4870391_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000001637 210.0
PJD1_k127_4870391_5 response regulator, receiver - - - 0.0000000000000000000000000002836 118.0
PJD1_k127_4870391_6 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000001796 106.0
PJD1_k127_4870391_7 Rhodanese Homology Domain - - - 0.000000000000000000001502 99.0
PJD1_k127_4870391_8 Na Ca antiporter, CaCA family K07301 - - 0.000000000000000000005007 104.0
PJD1_k127_4870391_9 Protein of unknown function (DUF3341) - - - 0.00000000000000003053 91.0
PJD1_k127_4890425_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.642e-216 684.0
PJD1_k127_4890425_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 4.133e-209 671.0
PJD1_k127_4890425_10 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000002434 268.0
PJD1_k127_4890425_11 integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001466 264.0
PJD1_k127_4890425_12 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000003968 231.0
PJD1_k127_4890425_13 PFAM VanW family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000004982 241.0
PJD1_k127_4890425_14 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate - - - 0.00000000000000000000000000000000000000000000000000000000000001227 220.0
PJD1_k127_4890425_15 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000454 228.0
PJD1_k127_4890425_16 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000008631 211.0
PJD1_k127_4890425_17 Protein of unknown function (DUF1648) - - - 0.0000000000000000000000000000000000000000000000000002784 192.0
PJD1_k127_4890425_18 Glycosyltransferase, group 4 family K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000007059 197.0
PJD1_k127_4890425_19 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000002326 191.0
PJD1_k127_4890425_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 452.0
PJD1_k127_4890425_20 Peptidase_C39 like family - - - 0.000000000000000000000000000000000000000000000000183 191.0
PJD1_k127_4890425_21 UbiA prenyltransferase family - - - 0.0000000000000000000000000000000000000000000000365 182.0
PJD1_k127_4890425_22 Ribosomal RNA adenine dimethylase K00561 - 2.1.1.184 0.00000000000000000000000000000000000000000002319 171.0
PJD1_k127_4890425_23 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.000000000000000000000000000000000000000005902 162.0
PJD1_k127_4890425_24 NUDIX domain - - - 0.0000000000000000000000000000000000000001296 154.0
PJD1_k127_4890425_25 oligosaccharyl transferase activity - - - 0.00000000000000000000000000000001478 144.0
PJD1_k127_4890425_26 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.00000000000000000000000000000001973 134.0
PJD1_k127_4890425_27 Methyltransferase domain - - - 0.00000000000000000000000000001524 129.0
PJD1_k127_4890425_28 reductase K00059 - 1.1.1.100 0.00000000000000000000000000001591 127.0
PJD1_k127_4890425_29 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000001836 120.0
PJD1_k127_4890425_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 420.0
PJD1_k127_4890425_30 Bacteriocin-protection protein - - - 0.00000000000000000000000001006 115.0
PJD1_k127_4890425_31 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000001074 114.0
PJD1_k127_4890425_32 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000001547 122.0
PJD1_k127_4890425_33 PFAM ribonuclease H K03469,K06864 - 3.1.26.4 0.0000000000000000000000002327 111.0
PJD1_k127_4890425_34 Bacterial Ig-like domain (group 1) - - - 0.00000000000000000000009266 110.0
PJD1_k127_4890425_35 Haloacid dehalogenase-like hydrolase K20866 - 3.1.3.10 0.000000000000000000000736 108.0
PJD1_k127_4890425_36 methyltransferase activity - - - 0.000000000000000000001034 100.0
PJD1_k127_4890425_37 G5 - - - 0.000000000000000000001608 104.0
PJD1_k127_4890425_38 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000001925 96.0
PJD1_k127_4890425_39 Membrane protein insertase, YidC Oxa1 family K03217 - - 0.000000000000000000003473 103.0
PJD1_k127_4890425_4 UvrD/REP helicase N-terminal domain K03657,K07465 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 388.0
PJD1_k127_4890425_40 Bacterial extracellular solute-binding protein K02027 - - 0.00000000000000000001933 106.0
PJD1_k127_4890425_41 Domain of unknown function (DUF4342) - - - 0.00000000000000000004149 92.0
PJD1_k127_4890425_42 competence protein - - - 0.0000000000000000000434 100.0
PJD1_k127_4890425_43 single-stranded nucleic acid binding R3H K06346 - - 0.00000000000000000005928 96.0
PJD1_k127_4890425_44 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000003501 102.0
PJD1_k127_4890425_45 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000006878 85.0
PJD1_k127_4890425_46 Protein of unknown function (DUF4012) - - - 0.0000000000000001114 95.0
PJD1_k127_4890425_47 NUDIX domain - - - 0.0000000000000001998 85.0
PJD1_k127_4890425_48 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000009511 89.0
PJD1_k127_4890425_49 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000001515 89.0
PJD1_k127_4890425_5 Type IV secretory pathway, VirB4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 391.0
PJD1_k127_4890425_51 Peptidase_C39 like family - - - 0.00000000000000296 90.0
PJD1_k127_4890425_52 stage II sporulation K06381 - - 0.000000000000009472 88.0
PJD1_k127_4890425_53 Histone-lysine N-methyltransferase. Source PGD - - - 0.00000000000005898 81.0
PJD1_k127_4890425_55 Thiopurine S-methyltransferase (TPMT) K16868 - 2.1.1.265 0.000000000008326 74.0
PJD1_k127_4890425_56 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000005357 74.0
PJD1_k127_4890425_57 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000005807 70.0
PJD1_k127_4890425_58 Carbon-nitrogen hydrolase - - - 0.0000000001144 71.0
PJD1_k127_4890425_59 - - - - 0.0000000004026 67.0
PJD1_k127_4890425_6 PFAM NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 357.0
PJD1_k127_4890425_60 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K07025 - - 0.00000000328 64.0
PJD1_k127_4890425_61 lycopene cyclase - - - 0.000000007509 60.0
PJD1_k127_4890425_62 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000009442 61.0
PJD1_k127_4890425_63 thiolester hydrolase activity K22250 - 3.1.1.76 0.000000009997 66.0
PJD1_k127_4890425_64 - - - - 0.00000002966 57.0
PJD1_k127_4890425_65 NUDIX domain - - - 0.00000003499 62.0
PJD1_k127_4890425_66 Domain of unknown function (DUF4173) - - - 0.00000005831 65.0
PJD1_k127_4890425_67 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000004257 52.0
PJD1_k127_4890425_68 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.00000203 56.0
PJD1_k127_4890425_69 Peptidase family M23 K21471 - - 0.000003607 61.0
PJD1_k127_4890425_7 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006245 330.0
PJD1_k127_4890425_70 protein, YerC YecD - - - 0.00001808 52.0
PJD1_k127_4890425_71 NUDIX domain K18445 - 3.6.1.61 0.00002905 52.0
PJD1_k127_4890425_72 Belongs to the Nudix hydrolase family - - - 0.00003593 53.0
PJD1_k127_4890425_73 DHH family - - - 0.00007506 54.0
PJD1_k127_4890425_75 N-acetylmuramoyl-L-alanine amidase K01447,K11062 - 3.5.1.28 0.0004492 51.0
PJD1_k127_4890425_8 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 330.0
PJD1_k127_4890425_9 PFAM ABC transporter related K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 322.0
PJD1_k127_4984828_0 Capsule assembly protein Wzi - - - 0.0000000000000000000000001919 111.0
PJD1_k127_5155209_0 COGs COG0503 Adenine guanine phosphoribosyltransferase and related PRPP-binding protein K00759 - 2.4.2.7 0.000000000000000000000000000000000003699 143.0
PJD1_k127_5199459_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1054.0
PJD1_k127_5199459_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 9.639e-220 701.0
PJD1_k127_5199459_10 Transglutaminase-like superfamily - - - 0.00000001962 67.0
PJD1_k127_5199459_11 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins K07533 - 5.2.1.8 0.00000002362 63.0
PJD1_k127_5199459_12 PFAM membrane protein of K08972 - - 0.0000002995 57.0
PJD1_k127_5199459_13 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00001003 50.0
PJD1_k127_5199459_14 negative regulation of phosphatase activity - - - 0.0002084 52.0
PJD1_k127_5199459_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030145,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0043937,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046537,GO:0046700,GO:0046872,GO:0046914,GO:0046939,GO:0050789,GO:0050793,GO:0051186,GO:0051188,GO:0055086,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 511.0
PJD1_k127_5199459_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 368.0
PJD1_k127_5199459_4 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000005531 209.0
PJD1_k127_5199459_5 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000001255 183.0
PJD1_k127_5199459_6 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000001798 151.0
PJD1_k127_5199459_7 CHRD domain - - - 0.000000000000000000000000000001051 126.0
PJD1_k127_5199459_8 Cytosolic enolase K01689 GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 4.2.1.11 0.000000000000000000000000007136 111.0
PJD1_k127_5199459_9 Calcineurin-like phosphoesterase - - - 0.000000000000000005219 98.0
PJD1_k127_5254076_0 ATP-dependent DNA helicase K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 532.0
PJD1_k127_5254076_1 Uncharacterized membrane protein (DUF2298) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 482.0
PJD1_k127_5254076_2 UvrD/REP helicase N-terminal domain K03657,K07465 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 329.0
PJD1_k127_5254076_3 Methicillin resistance protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001115 263.0
PJD1_k127_5254076_4 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000001727 215.0
PJD1_k127_5254076_5 Uncharacterized membrane protein (DUF2298) - - - 0.0000000000000000000000000000000000000000000000000009161 204.0
PJD1_k127_5254076_6 NUDIX domain - - - 0.00000000000000000000000000000000001052 141.0
PJD1_k127_5254076_7 TRANSCRIPTIONal - - - 0.000000000000000000000000000153 128.0
PJD1_k127_5254076_8 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000151 114.0
PJD1_k127_5254076_9 Acetyltransferase (GNAT) domain K05363,K11693 - 2.3.2.10,2.3.2.16 0.0000000003275 70.0
PJD1_k127_527401_0 DNA helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 343.0
PJD1_k127_527401_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007798 327.0
PJD1_k127_527401_10 Domain of unknown function (DUF4870) - - - 0.00000000009927 67.0
PJD1_k127_527401_11 Acylphosphatase K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.000006976 50.0
PJD1_k127_527401_12 Transcriptional regulatory protein, C terminal - - - 0.0000153 57.0
PJD1_k127_527401_13 Protein of unknown function DUF72 - - - 0.0001344 46.0
PJD1_k127_527401_14 Major facilitator superfamily - - - 0.0003825 52.0
PJD1_k127_527401_2 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000001587 272.0
PJD1_k127_527401_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000004168 192.0
PJD1_k127_527401_4 protein with SCP PR1 domains - - - 0.00000000000000000000000000000000000000000000000004957 190.0
PJD1_k127_527401_5 Thioredoxin - - - 0.0000000000000000000000000000000000002044 151.0
PJD1_k127_527401_6 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000357 143.0
PJD1_k127_527401_7 Required for disulfide bond formation in some proteins K03611 - - 0.00000000000000000000000000000005328 132.0
PJD1_k127_527401_8 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 - - 0.00000000000000000000000001103 112.0
PJD1_k127_527401_9 Protein of unknown function (DUF3105) - - - 0.000000000000000004997 93.0
PJD1_k127_5297140_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 337.0
PJD1_k127_5297140_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000005023 207.0
PJD1_k127_5297140_10 Domain of unknown function (DUF5060) - - - 0.00001065 58.0
PJD1_k127_5297140_11 Cysteine-rich secretory protein family - - - 0.00004291 53.0
PJD1_k127_5297140_12 Phosphorylase family - - - 0.0001175 53.0
PJD1_k127_5297140_2 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000004657 174.0
PJD1_k127_5297140_3 Sortase family - - - 0.0000000000000000000000000009526 121.0
PJD1_k127_5297140_4 Ribosomal protein L33 K02913 - - 0.00000000000002142 74.0
PJD1_k127_5297140_5 - - - - 0.000000000004126 78.0
PJD1_k127_5297140_6 Alpha amylase catalytic - - - 0.00000000000759 78.0
PJD1_k127_5297140_7 HD superfamily hydrolase K06950 - - 0.00000000001307 72.0
PJD1_k127_5297140_8 - - - - 0.0000000006842 72.0
PJD1_k127_533724_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 3.257e-223 736.0
PJD1_k127_533724_1 COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02243,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 336.0
PJD1_k127_533724_10 SpoU rRNA Methylase family - - - 0.00000000000000000000000000000000422 136.0
PJD1_k127_533724_11 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000002058 129.0
PJD1_k127_533724_12 Thiamine triphosphatase K05307 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0017144,GO:0019637,GO:0034641,GO:0042357,GO:0042723,GO:0043167,GO:0043169,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050333,GO:0051186,GO:0071704,GO:0072527,GO:1901360,GO:1901564 3.6.1.28 0.0000000000000000000001962 104.0
PJD1_k127_533724_13 PFAM RNP-1 like RNA-binding protein - - - 0.0000000000000000000003301 98.0
PJD1_k127_533724_14 Domain of unknown function (DUF4142) - - - 0.00000000000006766 78.0
PJD1_k127_533724_15 GIY-YIG catalytic domain K07461 - - 0.00000000001688 68.0
PJD1_k127_533724_16 DUF1704 - - - 0.00000000003834 74.0
PJD1_k127_533724_17 monooxygenase activity - - - 0.0000000004914 62.0
PJD1_k127_533724_18 - - - - 0.000000006287 63.0
PJD1_k127_533724_19 - - - - 0.000001145 51.0
PJD1_k127_533724_2 G8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 352.0
PJD1_k127_533724_20 Bacterial PH domain K08981 - - 0.0008605 49.0
PJD1_k127_533724_21 PFAM permease K07089 - - 0.0009532 50.0
PJD1_k127_533724_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 312.0
PJD1_k127_533724_4 Pectate lyase K01728 - 4.2.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001532 287.0
PJD1_k127_533724_5 PFAM SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003315 258.0
PJD1_k127_533724_6 reductase K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000005807 234.0
PJD1_k127_533724_7 Protein of unknown function DUF84 - - - 0.00000000000000000000000000000000000000000000000000000000000007525 217.0
PJD1_k127_533724_8 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.000000000000000000000000000000000000000000000592 175.0
PJD1_k127_533724_9 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000002814 171.0
PJD1_k127_5399400_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835,K01840 - 5.4.2.2,5.4.2.8 5.825e-241 763.0
PJD1_k127_5399400_1 PFAM Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009309 301.0
PJD1_k127_5399400_2 TIGRFAM bifunctional phosphoglucose phosphomannose isomerase K15916 - 5.3.1.8,5.3.1.9 0.000000000000000000000000000000000000000000000001943 186.0
PJD1_k127_5399400_3 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000006438 154.0
PJD1_k127_5399400_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000001161 134.0
PJD1_k127_5399400_5 Belongs to the inositol monophosphatase superfamily K01092 GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25 0.0000000000000000000000000000003429 132.0
PJD1_k127_5399400_6 - - - - 0.0000000000000000000000000006171 117.0
PJD1_k127_5399400_7 peptidase U32 K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000001412 61.0
PJD1_k127_5399400_8 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0001915 51.0
PJD1_k127_5579657_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 4.12e-276 888.0
PJD1_k127_5579657_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03694,K03695 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0010033,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030312,GO:0030554,GO:0031249,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0035966,GO:0036094,GO:0040007,GO:0042221,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 - 3.181e-257 811.0
PJD1_k127_5579657_10 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000006022 93.0
PJD1_k127_5579657_11 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000003193 88.0
PJD1_k127_5579657_12 PspC domain - - - 0.0000000000001071 73.0
PJD1_k127_5579657_13 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000007499 69.0
PJD1_k127_5579657_14 Protein of unknown function (DUF1761) - - - 0.0000002071 58.0
PJD1_k127_5579657_15 Pfam:DUF2233 - - - 0.000008486 56.0
PJD1_k127_5579657_16 Transcriptional regulatory protein, C terminal - - - 0.00000898 54.0
PJD1_k127_5579657_17 Psort location Cytoplasmic, score 8.96 K21636 - 1.1.98.6 0.0006973 45.0
PJD1_k127_5579657_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008227 468.0
PJD1_k127_5579657_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 383.0
PJD1_k127_5579657_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000008474 161.0
PJD1_k127_5579657_5 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000001445 126.0
PJD1_k127_5579657_6 integral membrane protein - - - 0.000000000000000000000000004089 119.0
PJD1_k127_5579657_7 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000004671 108.0
PJD1_k127_5579657_8 Uncharacterised protein family UPF0102 K07460 - - 0.000000000000000000000006972 104.0
PJD1_k127_5579657_9 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000004523 98.0
PJD1_k127_5590498_0 PFAM amine oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 363.0
PJD1_k127_5590498_1 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.000000000000000000000000000000002854 137.0
PJD1_k127_5590498_2 glycosyl transferase, family 39 - - - 0.000000000000000000000000000000972 136.0
PJD1_k127_5744019_0 Ion transport protein K10716 - - 0.00000000000000000000000000000000000000000000000000000002504 205.0
PJD1_k127_5744019_1 Nucleotidyltransferase domain K07075 - - 0.000000000000000000000000000006006 123.0
PJD1_k127_5972744_0 Unextendable partial coding region - - - 0.00000000000002799 73.0
PJD1_k127_5972744_1 - - - - 0.0005787 45.0
PJD1_k127_5982420_0 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000006303 198.0
PJD1_k127_5982420_1 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.0000000000000000000000000000000000000000000000652 189.0
PJD1_k127_5982420_2 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.00000000000000000000000000000000000000002301 172.0
PJD1_k127_5982420_3 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.0000000000000000000000000000000001972 150.0
PJD1_k127_5982420_4 Polysaccharide biosynthesis protein K03328,K16695 - - 0.0000000000000000000000000000712 132.0
PJD1_k127_5982420_5 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000001032 104.0
PJD1_k127_5982420_6 C-terminal four TMM region of protein-O-mannosyltransferase K00728 - 2.4.1.109 0.0000000005107 72.0
PJD1_k127_5982420_7 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000003207 54.0
PJD1_k127_6027360_0 - - - - 0.000000000000893 72.0
PJD1_k127_6027360_2 - - - - 0.000000006356 57.0
PJD1_k127_6504466_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1140.0
PJD1_k127_6504466_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1136.0
PJD1_k127_6504466_10 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000004195 215.0
PJD1_k127_6504466_11 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000006782 209.0
PJD1_k127_6504466_12 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000004391 201.0
PJD1_k127_6504466_13 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000004656 201.0
PJD1_k127_6504466_14 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000863 198.0
PJD1_k127_6504466_15 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000001645 195.0
PJD1_k127_6504466_16 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000004198 188.0
PJD1_k127_6504466_17 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000002011 173.0
PJD1_k127_6504466_18 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000003957 173.0
PJD1_k127_6504466_19 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000003352 168.0
PJD1_k127_6504466_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 7.917e-253 799.0
PJD1_k127_6504466_20 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000001059 160.0
PJD1_k127_6504466_21 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000002495 158.0
PJD1_k127_6504466_22 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000002654 149.0
PJD1_k127_6504466_23 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000001802 141.0
PJD1_k127_6504466_24 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000003706 137.0
PJD1_k127_6504466_25 Calcineurin-like phosphoesterase K14379 - 3.1.3.2 0.00000000000000000000000000002151 128.0
PJD1_k127_6504466_26 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000004053 119.0
PJD1_k127_6504466_27 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000007311 119.0
PJD1_k127_6504466_28 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000007381 120.0
PJD1_k127_6504466_29 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000004841 109.0
PJD1_k127_6504466_3 GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008499 604.0
PJD1_k127_6504466_30 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000005771 108.0
PJD1_k127_6504466_31 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000002648 101.0
PJD1_k127_6504466_32 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000003614 98.0
PJD1_k127_6504466_33 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000009148 87.0
PJD1_k127_6504466_34 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000119 91.0
PJD1_k127_6504466_35 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000003736 89.0
PJD1_k127_6504466_36 Ribosomal protein S17 K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000004465 81.0
PJD1_k127_6504466_37 Ribosomal protein L17 K02879 - - 0.000000000000001032 83.0
PJD1_k127_6504466_38 Ribosomal protein L22p/L17e K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000002679 81.0
PJD1_k127_6504466_39 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000007863 71.0
PJD1_k127_6504466_4 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007349 572.0
PJD1_k127_6504466_40 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000004749 64.0
PJD1_k127_6504466_41 Belongs to the Nudix hydrolase family - - - 0.000000002643 63.0
PJD1_k127_6504466_5 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 370.0
PJD1_k127_6504466_6 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000594 276.0
PJD1_k127_6504466_7 PFAM PfkB domain protein K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000001035 259.0
PJD1_k127_6504466_8 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000001819 258.0
PJD1_k127_6504466_9 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000001203 208.0
PJD1_k127_6575135_0 DNA-directed DNA polymerase activity K02347,K04477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 326.0
PJD1_k127_6575135_1 dTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 291.0
PJD1_k127_6575135_10 Serine aminopeptidase, S33 - - - 0.00000000001272 75.0
PJD1_k127_6575135_11 nucleoside-diphosphate sugar epimerases - - - 0.0000000002574 64.0
PJD1_k127_6575135_12 Belongs to the peptidase S8 family K01361 - 3.4.21.96 0.0000001851 61.0
PJD1_k127_6575135_13 Belongs to the 5'-nucleotidase family K01081,K11751 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006195,GO:0006213,GO:0006259,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007155,GO:0007159,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009164,GO:0009166,GO:0009987,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019362,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0022610,GO:0031974,GO:0031981,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046135,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0051186,GO:0055086,GO:0070013,GO:0071704,GO:0071944,GO:0072521,GO:0072523,GO:0072524,GO:0072527,GO:0072529,GO:0090304,GO:0098609,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5,3.6.1.45 0.000001442 59.0
PJD1_k127_6575135_2 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000003191 250.0
PJD1_k127_6575135_3 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000123 229.0
PJD1_k127_6575135_4 PFAM methyltransferase - - - 0.0000000000000000000000000000000000000000000001665 180.0
PJD1_k127_6575135_5 Glycosyltransferase, group 2 family protein - - - 0.00000000000000000000000000000000000001052 154.0
PJD1_k127_6575135_6 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K05710 - - 0.00000000000000000000000000000000041 141.0
PJD1_k127_6575135_7 Glycosyltransferase like family 2 K07011 - - 0.00000000000000000000000000000001335 147.0
PJD1_k127_6575135_8 Transcriptional regulator - - - 0.000000000000003241 81.0
PJD1_k127_6575135_9 LysM domain - - - 0.00000000000002286 83.0
PJD1_k127_6697644_0 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000007891 220.0
PJD1_k127_6697644_1 Protein conserved in bacteria - - - 0.00000000000000000000000002484 111.0
PJD1_k127_6697644_2 - - - - 0.0000000000000005888 90.0
PJD1_k127_6697644_3 PFAM beta-lactamase domain protein K02238 - - 0.0000000696 59.0
PJD1_k127_6703896_0 Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000005849 255.0
PJD1_k127_6703896_1 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000009263 229.0
PJD1_k127_6703896_10 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000009427 104.0
PJD1_k127_6703896_11 Belongs to the RimK family K05844,K14940 - 6.3.2.32 0.0000000000000000003745 98.0
PJD1_k127_6703896_12 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000001489 87.0
PJD1_k127_6703896_13 Sigma-70 region 2 K03088 - - 0.0000000000000002645 89.0
PJD1_k127_6703896_14 Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions - GO:0003674,GO:0003824,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111 - 0.00000000000002922 79.0
PJD1_k127_6703896_15 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.00000000000009527 81.0
PJD1_k127_6703896_16 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000001994 54.0
PJD1_k127_6703896_17 Bacterial Ig-like domain - - - 0.0000003719 61.0
PJD1_k127_6703896_18 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000009139 55.0
PJD1_k127_6703896_19 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00005622 48.0
PJD1_k127_6703896_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000001156 209.0
PJD1_k127_6703896_20 - - - - 0.0001673 53.0
PJD1_k127_6703896_21 PFAM GCN5-related N-acetyltransferase K00619 - 2.3.1.1 0.0003037 48.0
PJD1_k127_6703896_22 Cellulose 1,4-beta-cellobiosidase - - - 0.0004922 52.0
PJD1_k127_6703896_23 general secretion pathway protein G K02456 - - 0.0005014 53.0
PJD1_k127_6703896_3 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000009358 217.0
PJD1_k127_6703896_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000004693 173.0
PJD1_k127_6703896_5 AAA domain - - - 0.00000000000000000000000000000000000000000001638 170.0
PJD1_k127_6703896_6 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000001907 149.0
PJD1_k127_6703896_7 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000009129 137.0
PJD1_k127_6703896_8 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000002677 133.0
PJD1_k127_6703896_9 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000001688 109.0
PJD1_k127_7150301_0 glycosyl transferase family 2 K07011 - - 0.000000000000000000000000000000000000000000000000000000000008314 217.0
PJD1_k127_7150301_1 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000002043 199.0
PJD1_k127_7263737_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007669 332.0
PJD1_k127_7263737_1 belongs to the phosphoglycerate kinase family K00927,K01803 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3,5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000005009 231.0
PJD1_k127_7263737_10 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000085 93.0
PJD1_k127_7263737_11 Glutaredoxin - - - 0.000000000000001207 79.0
PJD1_k127_7263737_12 HNH nucleases - - - 0.0005303 44.0
PJD1_k127_7263737_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.0000000000000000000000000000000000000000000000001012 184.0
PJD1_k127_7263737_3 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.00000000000000000000000000000000000000004673 160.0
PJD1_k127_7263737_4 VIT family - - - 0.0000000000000000000000000000000005856 136.0
PJD1_k127_7263737_5 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000319 139.0
PJD1_k127_7263737_6 UDP-glucoronosyl and UDP-glucosyl transferase - - - 0.0000000000000000000000000000002998 138.0
PJD1_k127_7263737_7 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000004413 117.0
PJD1_k127_7263737_8 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.00000000000000000000000005863 112.0
PJD1_k127_7263737_9 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000006991 122.0
PJD1_k127_73814_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 505.0
PJD1_k127_73814_1 ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007392 387.0
PJD1_k127_73814_2 PFAM acyltransferase 3 - - - 0.000000000000000000000000000000000000000000000000000000002505 211.0
PJD1_k127_73814_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000002189 153.0
PJD1_k127_73814_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000123 101.0
PJD1_k127_7520183_0 Carbamoyltransferase C-terminus K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009521 532.0
PJD1_k127_7520183_1 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000001388 214.0
PJD1_k127_7520183_2 Sulfatase - - - 0.0000000000000000000000000000000007966 148.0
PJD1_k127_7520183_3 Domain of unknown function (DUF4976) - - - 0.0000000000000000001484 103.0
PJD1_k127_7520183_4 Sulfatase K01133 - 3.1.6.6 0.000000000000000001472 100.0
PJD1_k127_7520183_5 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000004831 99.0
PJD1_k127_7743789_0 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002006 247.0
PJD1_k127_7743789_1 protein homooligomerization - - - 0.00000000000000000000000000000000000000009587 157.0
PJD1_k127_7743789_2 Domain of unknown function (DUF296) K06934 - - 0.0000000000000000000000000000000003063 135.0
PJD1_k127_7743789_3 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000002149 125.0
PJD1_k127_7743789_4 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000004663 113.0
PJD1_k127_7743789_5 Helix-turn-helix XRE-family like proteins K07729 - - 0.00000000000000000000000007166 107.0
PJD1_k127_7743789_6 - - - - 0.00000000000000000000001566 105.0
PJD1_k127_7743789_7 Domain of unknown function (DU1801) - - - 0.000000000000000000002239 97.0
PJD1_k127_7743789_8 glyoxalase III activity - - - 0.00000000000001348 74.0
PJD1_k127_7911021_0 nucleoside-diphosphate sugar epimerases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005912 295.0
PJD1_k127_7911021_1 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000003517 218.0
PJD1_k127_7911021_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000004744 169.0
PJD1_k127_7911021_3 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.000000000000008995 83.0
PJD1_k127_7911021_4 - - - - 0.000002734 59.0
PJD1_k127_7911021_5 DTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.00007723 49.0
PJD1_k127_7911021_6 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0007335 51.0
PJD1_k127_902900_0 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000000001631 208.0
PJD1_k127_902900_1 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000007492 183.0
PJD1_k127_902900_2 Lysin motif - - - 0.00000000000000000000000000000000000000003184 156.0
PJD1_k127_902900_3 Dodecin K09165 - - 0.000000000000000002955 85.0
PJD1_k127_945182_0 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0000000000000000000000000000000000000000000000000000145 205.0
PJD1_k127_945182_1 PFAM Haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000000000006098 146.0
PJD1_k127_945182_2 Belongs to the Nudix hydrolase family - - - 0.000000457 55.0