Overview

ID MAG02875
Name PJD1_bin.44
Sample SMP0067
Taxonomy
Kingdom Bacteria
Phylum Nitrospirota
Class Nitrospiria
Order Nitrospirales
Family Nitrospiraceae
Genus Palsa-1315
Species
Assembly information
Completeness (%) 76.86
Contamination (%) 1.08
GC content (%) 56.0
N50 (bp) 9,713
Genome size (bp) 2,914,379

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2539

Gene name Description KEGG GOs EC E-value Score Sequence
PJD1_k127_101033_0 mitochondrial gene expression - - - 0.0 1072.0
PJD1_k127_1028137_0 - K02600 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 3.606e-197 625.0
PJD1_k127_10300_0 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 420.0
PJD1_k127_10300_1 heat shock protein binding K05516,K05801,K18481 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007565 274.0
PJD1_k127_10300_2 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.00000000000000000000000000000000000000001179 155.0
PJD1_k127_1030398_0 lipopolysaccharide transport K22110 - - 0.0 1553.0
PJD1_k127_1030398_1 Glycogen debranching enzyme - - - 1.213e-293 915.0
PJD1_k127_1030398_2 PFAM type II secretion system protein E K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 504.0
PJD1_k127_1030398_3 COGs COG3485 Protocatechuate 3 4-dioxygenase beta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 290.0
PJD1_k127_1030398_4 - - - - 0.00000000000000000000008635 98.0
PJD1_k127_1030398_5 Putative zinc-finger - - - 0.000000001549 63.0
PJD1_k127_1043483_0 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 332.0
PJD1_k127_1052776_1 - - - - 0.000000000000000000009566 95.0
PJD1_k127_1052776_2 Domain of unknown function (DUF4926) - - - 0.0000000000000000003344 89.0
PJD1_k127_1057348_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 6.88e-218 682.0
PJD1_k127_1057348_1 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 493.0
PJD1_k127_1057348_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 446.0
PJD1_k127_1057348_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 421.0
PJD1_k127_1057348_5 monooxygenase activity K00688,K15760,K16157,K16242,K18223,K22353,K22357 GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0008150,GO:0008152,GO:0009987,GO:0015049,GO:0015050,GO:0015947,GO:0016491,GO:0016705,GO:0016709,GO:0032991,GO:0043446,GO:0044237,GO:0055114,GO:0071704,GO:1902494 1.14.13.227,1.14.13.236,1.14.13.25,1.14.13.69,2.4.1.1 0.0000000000000000000009247 96.0
PJD1_k127_1075760_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00124,K00335 - 1.6.5.3 3.175e-260 807.0
PJD1_k127_1075760_1 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 2.133e-250 801.0
PJD1_k127_1075760_2 fructose-bisphosphate aldolase activity K01622 - 3.1.3.11,4.1.2.13 4.799e-226 703.0
PJD1_k127_1075760_3 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 596.0
PJD1_k127_1075760_5 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000001014 172.0
PJD1_k127_1075760_6 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000005602 154.0
PJD1_k127_1075760_7 AMP binding - - - 0.00000003677 55.0
PJD1_k127_1083417_0 - K12065 - - 8.932e-251 781.0
PJD1_k127_1083417_1 FMN binding K19339,K19343 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 321.0
PJD1_k127_1083417_4 - - - - 0.0000272 47.0
PJD1_k127_1085143_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 3.367e-311 964.0
PJD1_k127_1085143_1 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 8.118e-261 812.0
PJD1_k127_1085143_10 Sulfurtransferase TusA - - - 0.000000000000000000000000000000000000002231 147.0
PJD1_k127_1085143_12 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000003378 113.0
PJD1_k127_1085143_13 lactoylglutathione lyase activity - - - 0.00000000000000000000000006582 108.0
PJD1_k127_1085143_2 Rieske (2fe-2S) - - - 3.441e-203 636.0
PJD1_k127_1085143_3 Male sterility protein K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009915 551.0
PJD1_k127_1085143_4 Formiminotransferase domain K00603,K01746,K13990 - 2.1.2.5,4.3.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009068 454.0
PJD1_k127_1085143_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K01142,K10773 GO:0000702,GO:0000703,GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006289,GO:0006296,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033683,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.11.2,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 336.0
PJD1_k127_1085143_6 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 311.0
PJD1_k127_1085143_7 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000000000000000000000000000000000000000000000003943 227.0
PJD1_k127_1085143_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000005838 212.0
PJD1_k127_1112834_0 Protein involved in outer membrane biogenesis K07289 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 582.0
PJD1_k127_1112834_1 - - - - 0.00000000000000000000000000000000000000000000001389 175.0
PJD1_k127_1134388_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 3.478e-303 945.0
PJD1_k127_1134388_1 anaerobic respiration K10535 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015975,GO:0015980,GO:0016491,GO:0016661,GO:0016663,GO:0019329,GO:0019331,GO:0034641,GO:0042597,GO:0044237,GO:0044281,GO:0044464,GO:0045333,GO:0047991,GO:0055114 1.7.2.6 1.3e-269 840.0
PJD1_k127_1134388_10 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000000000000002443 167.0
PJD1_k127_1134388_11 Cytochrome c-type biogenesis protein K02200 - - 0.00000000000000000000000000005189 122.0
PJD1_k127_1134388_12 Heme exporter protein D (CcmD) K02196 - - 0.00000005122 56.0
PJD1_k127_1134388_2 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009535 389.0
PJD1_k127_1134388_3 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 357.0
PJD1_k127_1134388_4 to Cytochrome c-554 precursor (C554) (Hydroxylamine oxidoreductase-linked cytochrome) pir A59036 cytochrome c554, tetraheme, precursor - Nitrosomonas europaea - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 323.0
PJD1_k127_1134388_5 Cytochrome c-type biogenesis protein K02200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 298.0
PJD1_k127_1134388_6 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002278 276.0
PJD1_k127_1134388_7 oxidoreductase DsbE K02199 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004346 255.0
PJD1_k127_1134388_8 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000000000000000005626 202.0
PJD1_k127_1134388_9 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000001406 203.0
PJD1_k127_115990_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 4.466e-207 652.0
PJD1_k127_115990_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006452 580.0
PJD1_k127_115990_2 general secretion pathway protein K10927 - - 0.000000000000000000000000000000000000000000000000000000000000000002053 233.0
PJD1_k127_115990_4 PFAM Fimbrial assembly family protein K02461,K02662,K02663,K12289 - - 0.0000000000000000000000005744 106.0
PJD1_k127_1185833_0 Aldo Keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 382.0
PJD1_k127_1185833_1 Aldo Keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 386.0
PJD1_k127_1185833_2 Sel1 domain protein repeat-containing protein K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005799 308.0
PJD1_k127_1185833_3 - - - - 0.00000000000000000000000000000000000000000000002408 180.0
PJD1_k127_1185833_4 methyl-accepting chemotaxis protein - - - 0.0000000000001596 78.0
PJD1_k127_1185833_5 sequence-specific DNA binding - - - 0.00007774 45.0
PJD1_k127_1187798_0 GHKL domain K13598 - 2.7.13.3 0.0 1148.0
PJD1_k127_1187798_1 Bacterial regulatory protein, Fis family K13599 - - 4.846e-248 771.0
PJD1_k127_1187798_2 AIR synthase related protein, N-terminal domain K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 511.0
PJD1_k127_1187798_3 MazG nucleotide pyrophosphohydrolase domain K02499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 354.0
PJD1_k127_1187798_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006163 311.0
PJD1_k127_1187798_5 response regulator, receiver K03413,K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000005635 182.0
PJD1_k127_1187798_6 Domain of unknown function (DUF1844) - - - 0.00000000000000000000000000000000000001094 148.0
PJD1_k127_1202013_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 2.205e-241 751.0
PJD1_k127_1202013_1 spermidine synthase activity K00797 - 2.5.1.16 5.434e-228 717.0
PJD1_k127_1202013_2 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 499.0
PJD1_k127_1202013_3 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005668 442.0
PJD1_k127_1202013_4 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 395.0
PJD1_k127_1202013_5 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 393.0
PJD1_k127_1202013_6 signal-transduction protein containing cAMP-binding and CBS domains K02342,K05847,K07182 - 2.7.7.7 0.000000000000000000000000000000000000000000003599 167.0
PJD1_k127_1205240_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 6.008e-318 977.0
PJD1_k127_1205240_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 1.996e-235 733.0
PJD1_k127_1205240_2 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 2.257e-220 687.0
PJD1_k127_1205240_3 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 490.0
PJD1_k127_1205240_4 Major Facilitator Superfamily K02575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 395.0
PJD1_k127_1205240_5 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000006691 229.0
PJD1_k127_1205240_6 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000006467 205.0
PJD1_k127_1205240_7 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000000000000000000000000000000000002103 174.0
PJD1_k127_1205240_8 peroxidase activity K09162 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016701,GO:0016702,GO:0042597,GO:0044464,GO:0050587,GO:0051213,GO:0055114 1.13.11.49 0.000001761 53.0
PJD1_k127_1205240_9 Transcriptional regulator - - - 0.00001996 51.0
PJD1_k127_122169_0 Cation transporter/ATPase, N-terminus - - - 0.0 1264.0
PJD1_k127_122169_1 MacB-like periplasmic core domain K02004 - - 8.984e-203 637.0
PJD1_k127_122169_10 Universal stress protein - - - 0.000000000000002098 87.0
PJD1_k127_122169_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005267 524.0
PJD1_k127_122169_3 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 365.0
PJD1_k127_122169_4 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 298.0
PJD1_k127_122169_5 ferroxidase activity K03594 GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003882 276.0
PJD1_k127_122169_6 Helix-hairpin-helix domain K04477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003247 271.0
PJD1_k127_122169_7 Macro domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003377 223.0
PJD1_k127_122169_8 IMP dehydrogenase activity K07182 - - 0.0000000000000000000000000000000000000000000000000000000000003333 214.0
PJD1_k127_122169_9 IMP dehydrogenase activity K07182 - - 0.000000000000000000000000000000009958 132.0
PJD1_k127_1229645_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 5.621e-319 997.0
PJD1_k127_1229645_1 photosynthesis K02453,K02660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 553.0
PJD1_k127_1229645_10 Dimerisation domain - - - 0.0000000000000000000000000000000000000000000000009338 189.0
PJD1_k127_1229645_15 - - - - 0.000000000000000000002885 100.0
PJD1_k127_1229645_2 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 542.0
PJD1_k127_1229645_3 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 444.0
PJD1_k127_1229645_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 397.0
PJD1_k127_1229645_5 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 322.0
PJD1_k127_1229645_6 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 299.0
PJD1_k127_1229645_7 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004394 248.0
PJD1_k127_1229645_8 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009457 254.0
PJD1_k127_1229645_9 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000002346 198.0
PJD1_k127_1232154_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1127.0
PJD1_k127_1232154_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1085.0
PJD1_k127_1232154_10 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 546.0
PJD1_k127_1232154_11 Metalloenzyme superfamily K15635 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 481.0
PJD1_k127_1232154_12 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 383.0
PJD1_k127_1232154_13 branched-chain-amino-acid transaminase activity K00824 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016053,GO:0016054,GO:0016740,GO:0016769,GO:0019478,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0046416,GO:0046437,GO:0047810,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007869 362.0
PJD1_k127_1232154_15 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 339.0
PJD1_k127_1232154_17 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001951 237.0
PJD1_k127_1232154_19 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000000000000000000000000004422 194.0
PJD1_k127_1232154_2 polyribonucleotide nucleotidyltransferase activity K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 5.178e-245 775.0
PJD1_k127_1232154_20 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000003489 187.0
PJD1_k127_1232154_21 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000000000000317 176.0
PJD1_k127_1232154_22 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00363,K05710 - 1.7.1.15 0.000000000000000000000000000000000000000000000133 172.0
PJD1_k127_1232154_23 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000002358 153.0
PJD1_k127_1232154_24 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000000003944 151.0
PJD1_k127_1232154_26 Protein conserved in bacteria K09764 - - 0.000000000000000000000000000000000001107 140.0
PJD1_k127_1232154_3 Aminotransferase class I and II K14261 - - 6.982e-237 735.0
PJD1_k127_1232154_4 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 2.253e-226 713.0
PJD1_k127_1232154_5 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.936e-222 696.0
PJD1_k127_1232154_6 Homoserine dehydrogenase K00003 - 1.1.1.3 7.873e-218 682.0
PJD1_k127_1232154_7 ACT domain K00928 - 2.7.2.4 9.069e-209 655.0
PJD1_k127_1232154_8 Participates in both transcription termination and antitermination K02600 - - 1.604e-207 649.0
PJD1_k127_1232154_9 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966 591.0
PJD1_k127_1249814_0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 479.0
PJD1_k127_1249814_1 - - - - 0.000000000000000000000000000275 122.0
PJD1_k127_1249814_2 Universal stress protein - - - 0.00000000000008967 76.0
PJD1_k127_1264827_0 Protein of unknown function (DUF3047) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 345.0
PJD1_k127_1264827_3 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000000000000000000000000003158 114.0
PJD1_k127_1264827_4 Protein conserved in bacteria - - - 0.00000000000000000000000001606 113.0
PJD1_k127_1264827_5 mRNA binding K07339 - - 0.00000000000000000000000002594 110.0
PJD1_k127_1268976_0 Glycosyl transferase, group K20444 - - 0.0 1128.0
PJD1_k127_1268976_1 -O-antigen K02847,K13009,K16705 GO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0019538,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 - 1.089e-215 688.0
PJD1_k127_1268976_10 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000002964 128.0
PJD1_k127_1268976_11 Prokaryotic N-terminal methylation motif K02650 GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 - 0.0000001244 54.0
PJD1_k127_1268976_2 Evidence 2b Function of strongly homologous gene K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 521.0
PJD1_k127_1268976_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 494.0
PJD1_k127_1268976_4 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 413.0
PJD1_k127_1268976_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 355.0
PJD1_k127_1268976_6 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002215 279.0
PJD1_k127_1268976_7 glycosyl transferase family 2 K07011,K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006613 263.0
PJD1_k127_1268976_8 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000005295 141.0
PJD1_k127_1268976_9 ABC-2 type transporter K09690 - - 0.000000000000000000000000000282 125.0
PJD1_k127_1348007_0 Animal haem peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008866 397.0
PJD1_k127_1348007_1 signal-transduction protein containing cAMP-binding and CBS domains K02342 - 2.7.7.7 0.000000006154 58.0
PJD1_k127_1348007_3 Bacterial Na+/H+ antiporter B (NhaB) K03893 - - 0.0004455 46.0
PJD1_k127_138347_0 IMP dehydrogenase activity K07182 - - 0.00000000000000000000000000000000000000000000000000000000000001717 220.0
PJD1_k127_138347_1 Aminoacyl-tRNA editing domain K19055 - - 0.00000000000000000000000000000000000008054 151.0
PJD1_k127_138347_2 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit C K10946 - - 0.000000001043 59.0
PJD1_k127_154718_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.073e-237 739.0
PJD1_k127_154718_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 559.0
PJD1_k127_154718_10 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000005964 129.0
PJD1_k127_154718_11 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000002394 98.0
PJD1_k127_154718_12 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K16079 - - 0.000000000000000000001598 94.0
PJD1_k127_154718_13 Ribosomal L32p protein family K02911 - - 0.0000000000000004873 79.0
PJD1_k127_154718_14 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000001141 82.0
PJD1_k127_154718_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008356 537.0
PJD1_k127_154718_3 Acyl transferase domain K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003597 451.0
PJD1_k127_154718_4 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 406.0
PJD1_k127_154718_5 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007371 278.0
PJD1_k127_154718_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000006693 237.0
PJD1_k127_154718_7 Single-strand binding protein family K03111 - - 0.000000000000000000000000000000000000000000000000000000000000005729 219.0
PJD1_k127_154718_8 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000242 216.0
PJD1_k127_154718_9 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000000000000000000001782 169.0
PJD1_k127_158051_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 537.0
PJD1_k127_1590671_0 Pyruvate kinase K00873 - 2.7.1.40 1.003e-252 797.0
PJD1_k127_1590671_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 6.266e-239 758.0
PJD1_k127_1590671_10 phosphorelay signal transduction system K07776 - - 0.000000000000000000000000000000000000000000000000002351 190.0
PJD1_k127_1590671_11 Belongs to the 5'-nucleotidase family K01119 - 3.1.3.6,3.1.4.16 0.00000000000000000000000000000000000000000000000001297 186.0
PJD1_k127_1590671_12 Domain in cystathionine beta-synthase and other proteins. K07182 - - 0.00000000000000000000000000000000000000009195 154.0
PJD1_k127_1590671_14 5'-nucleotidase, C-terminal domain K01081 - 3.1.3.5 0.00000002654 56.0
PJD1_k127_1590671_2 Magnesium transport protein CorA - - - 3.202e-196 627.0
PJD1_k127_1590671_3 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 486.0
PJD1_k127_1590671_4 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 408.0
PJD1_k127_1590671_5 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 302.0
PJD1_k127_1590671_6 Bacterial protein of unknown function (DUF839) K07093 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002214 285.0
PJD1_k127_1590671_7 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000002064 199.0
PJD1_k127_1590671_9 CHAD - - - 0.00000000000000000000000000000000000000000000000000003758 206.0
PJD1_k127_1593745_0 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 456.0
PJD1_k127_1593745_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000005159 186.0
PJD1_k127_1593745_2 - - - - 0.000000000000000000000000000000225 125.0
PJD1_k127_1603143_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1099.0
PJD1_k127_1603143_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007689 525.0
PJD1_k127_1603143_2 PAS fold - - - 0.00000000000000000000000007831 114.0
PJD1_k127_1603143_3 Transcriptional regulatory protein, C terminal - - - 0.0000000003237 61.0
PJD1_k127_1603680_0 Amino acid permease K03294 - - 4.526e-250 777.0
PJD1_k127_1603680_1 In Escherichia coli this enzyme appears to be an NAD NADP -dependent succinate semialdehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 1.618e-227 711.0
PJD1_k127_1603680_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 2.675e-223 699.0
PJD1_k127_1603680_3 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 326.0
PJD1_k127_1603680_5 Peptidase C26 K07010 - - 0.000000000000000008475 83.0
PJD1_k127_1609626_0 ATPase activity K02017,K02018,K03750,K15497 - 2.10.1.1,3.6.3.29,3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 439.0
PJD1_k127_1609626_1 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 380.0
PJD1_k127_1609626_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001321 271.0
PJD1_k127_1609626_3 PFAM binding-protein-dependent transport systems inner membrane component K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005907 259.0
PJD1_k127_1609626_4 Represses a number of genes involved in the response to DNA damage (SOS response) K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000001215 258.0
PJD1_k127_1609626_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000001074 207.0
PJD1_k127_1609626_7 phosphohistidine phosphatase, SixA K08296 - - 0.000000000000000000000000000000000000000000000002059 179.0
PJD1_k127_1610662_0 amine dehydrogenase activity - - - 0.0 1693.0
PJD1_k127_1610662_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 4.81e-300 924.0
PJD1_k127_1610662_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.134e-271 839.0
PJD1_k127_1611011_0 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 9.903e-271 838.0
PJD1_k127_1611011_1 Carbon-nitrogen hydrolase K03820 - - 4.68e-203 651.0
PJD1_k127_1611011_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 557.0
PJD1_k127_1611011_3 MacB-like periplasmic core domain K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 435.0
PJD1_k127_1611011_4 DNA topoisomerase II activity K03167 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 394.0
PJD1_k127_1611011_6 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000001249 131.0
PJD1_k127_1611933_0 PFAM FAD dependent oxidoreductase - - - 4.545e-203 643.0
PJD1_k127_1611933_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 298.0
PJD1_k127_1611933_2 belongs to the flavoprotein pyridine nucleotide cytochrome reductase family K00326 GO:0000166,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0004128,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005886,GO:0006091,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0012505,GO:0016020,GO:0016070,GO:0016491,GO:0016651,GO:0016653,GO:0019867,GO:0022900,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0098588,GO:0098805,GO:1901265,GO:1901360,GO:1901363 1.6.2.2 0.00000000000000000000000000000000000000000000000001187 189.0
PJD1_k127_1611933_4 Peptidase S24-like - - - 0.000002965 58.0
PJD1_k127_1620505_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 609.0
PJD1_k127_1620505_1 Uncharacterised conserved protein (DUF2156) K01163,K06940 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 478.0
PJD1_k127_1620505_2 Lysine-2,3-aminomutase K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000001386 261.0
PJD1_k127_1620505_3 glutathione transferase activity K00799 - 2.5.1.18 0.000000000000000000000000000001045 123.0
PJD1_k127_1623546_0 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 540.0
PJD1_k127_1623546_1 poly(3-hydroxybutyrate) depolymerase activity K07019 GO:0003674,GO:0003824,GO:0006629,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0044237,GO:0044238,GO:0044255,GO:0071704 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 432.0
PJD1_k127_1623546_2 adenylylsulfate kinase activity K00860,K00955 - 2.7.1.25,2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000002265 231.0
PJD1_k127_1623546_3 regulation of translation K03704,K05809 - - 0.0000000000000000000000000000001199 127.0
PJD1_k127_1623546_4 Phosphate acyltransferases - - - 0.000000000000000000000000003097 119.0
PJD1_k127_1623609_0 peroxidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 446.0
PJD1_k127_1623609_1 cyclic nucleotide binding K01420,K10914,K21556,K21562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 308.0
PJD1_k127_1623609_2 FtsZ-dependent cytokinesis K09892,K13924 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044424,GO:0044444,GO:0044464,GO:0051301 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000006728 241.0
PJD1_k127_1623609_3 two component, sigma54 specific, transcriptional regulator, Fis family K07713 - - 0.0005809 42.0
PJD1_k127_1624403_0 hydrogen-translocating pyrophosphatase activity K15987 - 3.6.1.1 0.0 1195.0
PJD1_k127_1624403_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1163.0
PJD1_k127_1624403_10 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006259 516.0
PJD1_k127_1624403_12 chaperone-mediated protein complex assembly K00373,K17052 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016530,GO:0022607,GO:0034622,GO:0042126,GO:0042128,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0051131,GO:0065003,GO:0071704,GO:0071840,GO:0071941,GO:0140104,GO:2001057 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 447.0
PJD1_k127_1624403_13 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 445.0
PJD1_k127_1624403_14 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007682 396.0
PJD1_k127_1624403_15 NADPH-dependent FMN reductase K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000001326 261.0
PJD1_k127_1624403_17 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000000000000000000000005495 184.0
PJD1_k127_1624403_18 HemY protein K02498 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000172 172.0
PJD1_k127_1624403_2 radical SAM domain protein - - - 0.0 1050.0
PJD1_k127_1624403_22 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000000000000000534 110.0
PJD1_k127_1624403_24 2 iron, 2 sulfur cluster binding K02192 GO:0003674,GO:0005488,GO:0048037,GO:0051536,GO:0051537,GO:0051540 - 0.000000000000000001084 88.0
PJD1_k127_1624403_3 metalloendopeptidase activity K08602 - - 3.062e-282 877.0
PJD1_k127_1624403_4 NHL repeat - - - 1.635e-240 746.0
PJD1_k127_1624403_5 DHH family K07462 - - 2.869e-240 754.0
PJD1_k127_1624403_6 PFAM SNF2-related protein - - - 1.489e-239 783.0
PJD1_k127_1624403_7 denitrification pathway - - - 4.306e-226 705.0
PJD1_k127_1624403_8 denitrification pathway - - - 3.472e-217 680.0
PJD1_k127_1624403_9 denitrification pathway - - - 6.319e-204 641.0
PJD1_k127_1628443_0 asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 370.0
PJD1_k127_1628443_1 transferase activity, transferring hexosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000001264 222.0
PJD1_k127_1628443_2 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0000000000000001237 85.0
PJD1_k127_1628443_3 Ribosomal protein L11 methyltransferase (PrmA) K11434 - 2.1.1.319 0.000000000001937 69.0
PJD1_k127_1628443_4 Transglutaminase-like superfamily - - - 0.0005558 48.0
PJD1_k127_1641399_0 Formate--tetrahydrofolate ligase K01938 GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.3 7.083e-274 851.0
PJD1_k127_1641399_1 stress-induced mitochondrial fusion K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009568 490.0
PJD1_k127_1641399_2 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009324 481.0
PJD1_k127_1641399_3 stress-induced mitochondrial fusion K04087 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0031226,GO:0031233,GO:0032991,GO:0043086,GO:0043170,GO:0044092,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0098796,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 475.0
PJD1_k127_1641399_4 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007895 417.0
PJD1_k127_1641399_5 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 312.0
PJD1_k127_1641399_6 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000001282 178.0
PJD1_k127_1641399_7 exodeoxyribonuclease VII activity K03602 - 3.1.11.6 0.0000000000000000000000000009688 113.0
PJD1_k127_1641399_8 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.000000000000000000000002368 107.0
PJD1_k127_1641718_0 aldo-keto reductase (NADP) activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 435.0
PJD1_k127_1641718_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 429.0
PJD1_k127_1641718_2 lipid binding K03098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 298.0
PJD1_k127_1641718_3 Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K00567,K10778 - 2.1.1.63 0.000000000002845 66.0
PJD1_k127_1647658_0 4 iron, 4 sulfur cluster binding K00113,K00176,K05524,K13795,K13796 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0045333,GO:0046872,GO:0048037,GO:0051536,GO:0051540,GO:0055114,GO:0071944 1.1.5.3,1.2.7.3 1.372e-209 657.0
PJD1_k127_1647658_1 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009909 340.0
PJD1_k127_1647658_2 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000219 262.0
PJD1_k127_1647658_3 cell redox homeostasis K03671,K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000107 201.0
PJD1_k127_1647658_4 COG2801 Transposase and inactivated derivatives K07497 - - 0.0000000000000000000000000000000000000000000537 168.0
PJD1_k127_1648417_0 Probable molybdopterin binding domain K03750 - 2.10.1.1 1.011e-235 733.0
PJD1_k127_1648417_1 Trypsin K04771 - 3.4.21.107 1.593e-230 720.0
PJD1_k127_1648417_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 1.037e-194 608.0
PJD1_k127_1648417_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 462.0
PJD1_k127_1648417_4 macromolecule localization K01421,K01992,K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 413.0
PJD1_k127_1648417_5 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 346.0
PJD1_k127_1648417_6 Mo-molybdopterin cofactor metabolic process K03750,K03753,K13818 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.10.1.1,2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007835 266.0
PJD1_k127_1648417_7 RNA recognition motif - - - 0.00000000000000000000000000000000000000000003284 164.0
PJD1_k127_1648417_8 Response regulator, receiver - - - 0.00000000000000000000000000003485 123.0
PJD1_k127_1648417_9 2OG-Fe(II) oxygenase superfamily K07394 - - 0.0000171 48.0
PJD1_k127_1653430_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 567.0
PJD1_k127_1653430_1 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 349.0
PJD1_k127_1658393_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 9.544e-234 730.0
PJD1_k127_1658393_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 3.325e-228 722.0
PJD1_k127_1658393_10 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000000000000000000000002448 137.0
PJD1_k127_1658393_13 Protein involved in outer membrane biogenesis K07289 - - 0.00004021 52.0
PJD1_k127_1658393_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000856 514.0
PJD1_k127_1658393_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 458.0
PJD1_k127_1658393_4 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009504 345.0
PJD1_k127_1658393_6 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000002404 228.0
PJD1_k127_1658393_7 recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000008461 213.0
PJD1_k127_1658393_8 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000001022 172.0
PJD1_k127_1658393_9 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000000006546 150.0
PJD1_k127_1660584_0 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000000000000002447 198.0
PJD1_k127_1687963_0 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 312.0
PJD1_k127_1687963_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001714 272.0
PJD1_k127_1687963_2 metal cluster binding K06940 - - 0.0000000000000000000000000000000000000000000000000000000000004282 217.0
PJD1_k127_1687963_3 regulation of translation K03530 - - 0.0000000000000000000000000000000000000000002731 162.0
PJD1_k127_1688615_0 COGs COG3328 Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 362.0
PJD1_k127_1688615_1 metallopeptidase activity K01637 - 4.1.3.1 0.00000000000000000000000000000000000000008119 162.0
PJD1_k127_1688615_2 Fkbm family - - - 0.000000000000000000000000000001113 131.0
PJD1_k127_1688615_3 cellulase activity K01884 - 6.1.1.16 0.00000001905 65.0
PJD1_k127_1690498_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 607.0
PJD1_k127_1690498_1 - - - - 0.000000000000000000000000000000003556 133.0
PJD1_k127_1690498_2 addiction module killer protein - - - 0.00000000000000000000000000000001854 130.0
PJD1_k127_1690771_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 1.444e-248 773.0
PJD1_k127_1690771_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 386.0
PJD1_k127_1690771_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000812 388.0
PJD1_k127_1690771_3 PilZ domain K02676 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004541 253.0
PJD1_k127_1690771_4 PilZ domain K02676 - - 0.0000000000000000000000000000000000000000000000000000000000000007135 224.0
PJD1_k127_1690771_5 protein secretion K03116 - - 0.0000000000000000000000000000000000000000000000000000000000004197 217.0
PJD1_k127_1690771_6 PBS lyase K22221 - - 0.00000000000000339 85.0
PJD1_k127_1708678_0 PFAM FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004636 458.0
PJD1_k127_1708678_1 methyltransferase K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 406.0
PJD1_k127_1708678_2 Catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge K00574 - 2.1.1.79 0.00000000003442 63.0
PJD1_k127_1708678_3 Protein of Unknown function (DUF2784) - - - 0.00000006609 57.0
PJD1_k127_1720828_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00520 - 1.16.1.1 1.818e-196 622.0
PJD1_k127_1720828_1 transmembrane transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007214 387.0
PJD1_k127_1720828_3 Protein conserved in bacteria K09705 - - 0.0000000000000000000000000003249 116.0
PJD1_k127_1720828_5 CBS domain containing protein - - - 0.000000005677 66.0
PJD1_k127_1735966_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 357.0
PJD1_k127_1735966_3 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.00000000003904 65.0
PJD1_k127_1765462_0 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 1.726e-277 865.0
PJD1_k127_1765462_1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 3.14e-267 842.0
PJD1_k127_1765462_10 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 412.0
PJD1_k127_1765462_11 transmembrane transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 307.0
PJD1_k127_1765462_12 mannosylglycerate metabolic process K05947,K07026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050897 2.4.1.217,3.1.3.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007792 303.0
PJD1_k127_1765462_13 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 291.0
PJD1_k127_1765462_14 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000002565 172.0
PJD1_k127_1765462_15 translation initiation factor activity K03407,K03646,K04065,K06596,K07277,K12065,K13593 - 2.7.13.3 0.00000000000000000000000000000000008496 144.0
PJD1_k127_1765462_16 PFAM Streptococcal 67 kDa myosin-cross-reactive antigen like family K10254 - 4.2.1.53 0.0000000000000000000000000000502 120.0
PJD1_k127_1765462_2 transferase activity, transferring glycosyl groups K13693 - 2.4.1.266 9.847e-218 681.0
PJD1_k127_1765462_3 Glycosyl transferase, family 2 K21349 - 2.4.1.268 5.534e-201 634.0
PJD1_k127_1765462_4 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 609.0
PJD1_k127_1765462_5 N-terminal domain of oxidoreductase K07119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 532.0
PJD1_k127_1765462_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 525.0
PJD1_k127_1765462_7 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 518.0
PJD1_k127_1765462_8 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003402 470.0
PJD1_k127_1765462_9 Sigma-54 interaction domain K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 423.0
PJD1_k127_1774507_0 Belongs to the peptidase S1B family - - - 1.402e-215 692.0
PJD1_k127_1774507_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006465 565.0
PJD1_k127_1774507_2 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000000009391 177.0
PJD1_k127_1774507_4 Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000000000001716 138.0
PJD1_k127_1774507_5 Helix-turn-helix domain - - - 0.00000000000000008165 85.0
PJD1_k127_1774507_6 EthD domain - - - 0.000000000008711 66.0
PJD1_k127_1774507_8 - - - - 0.00002753 52.0
PJD1_k127_1781665_0 DUF based on E. rectale Gene description (DUF3880) K06320 - - 1.381e-227 721.0
PJD1_k127_1781665_1 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 595.0
PJD1_k127_1781665_10 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000000000000000000000004544 212.0
PJD1_k127_1781665_11 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000001674 190.0
PJD1_k127_1781665_13 Chemotaxis phosphatase, CheZ K03414 - - 0.000000000000000000000000000000000000000000000000001585 190.0
PJD1_k127_1781665_14 TIGRFAM Diguanylate cyclase - - - 0.000000000000000000000000000000000000000004401 173.0
PJD1_k127_1781665_15 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 - - 0.00000000000000000000000000000000000000038 161.0
PJD1_k127_1781665_17 Flagellar protein FliS K02422 - - 0.00000000000000000000000000000000001055 140.0
PJD1_k127_1781665_18 DNA excision K02806 - - 0.000000000000000000000000001006 115.0
PJD1_k127_1781665_19 flagellar protein FlaG K06603 - - 0.00000000000000009552 84.0
PJD1_k127_1781665_2 Signal transduction histidine kinase, phosphotransfer (Hpt) region K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 592.0
PJD1_k127_1781665_21 transmembrane signaling receptor activity K03406 - - 0.000001139 57.0
PJD1_k127_1781665_3 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 516.0
PJD1_k127_1781665_4 MotA/TolQ/ExbB proton channel family K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009857 423.0
PJD1_k127_1781665_5 bacterial-type flagellum organization K04562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 406.0
PJD1_k127_1781665_6 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007592 390.0
PJD1_k127_1781665_7 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843,K02849 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 333.0
PJD1_k127_1781665_8 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 304.0
PJD1_k127_1781665_9 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001163 260.0
PJD1_k127_1799210_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1008.0
PJD1_k127_1799210_1 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00162,K11381 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 571.0
PJD1_k127_1799210_2 S-acyltransferase activity K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004432 525.0
PJD1_k127_1799210_3 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00161,K00162,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 489.0
PJD1_k127_1799210_4 AMP binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001969 252.0
PJD1_k127_1799210_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K12263 - - 0.00000000000000000000000000000000000000000000000000002925 190.0
PJD1_k127_1799210_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K12263 - - 0.000000000000000000000000000000000000000000004417 165.0
PJD1_k127_1799210_7 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.00000000000000000000000000000004508 130.0
PJD1_k127_1809212_0 methyltransferase - - - 2.858e-273 845.0
PJD1_k127_1809212_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 357.0
PJD1_k127_1809212_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002518 276.0
PJD1_k127_1809212_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002604 246.0
PJD1_k127_1809212_4 protein homooligomerization - - - 0.00000000000000000000000000000000000000000000000000000000000000000006708 244.0
PJD1_k127_1809212_6 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.00000000000000000000000001713 115.0
PJD1_k127_1816374_0 Molydopterin dinucleotide binding domain K00302,K10814 - 1.4.99.5,1.5.3.1 0.0 1460.0
PJD1_k127_1816374_1 NADH-quinone oxidoreductase K00341,K05568,K12139 - 1.6.5.3 0.0 1047.0
PJD1_k127_1816374_10 Phosphodiester glycosidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000141 272.0
PJD1_k127_1816374_11 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001619 266.0
PJD1_k127_1816374_12 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001309 251.0
PJD1_k127_1816374_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000000002543 166.0
PJD1_k127_1816374_2 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00342,K05575 - 1.6.5.3 1.772e-297 919.0
PJD1_k127_1816374_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 3.165e-266 821.0
PJD1_k127_1816374_4 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00342 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 7.346e-263 816.0
PJD1_k127_1816374_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 8.346e-253 787.0
PJD1_k127_1816374_6 CHASE3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003831 572.0
PJD1_k127_1816374_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 373.0
PJD1_k127_1816374_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 344.0
PJD1_k127_1816374_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 288.0
PJD1_k127_1820407_0 thiolester hydrolase activity K07100 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002574 282.0
PJD1_k127_1820407_1 Divalent cation transporter K06213 - - 0.00000000000000000000000000000000000000000000000007803 189.0
PJD1_k127_1820407_2 AMP binding - - - 0.0000000000000000000000000000000000000000000000239 174.0
PJD1_k127_1848316_0 response regulator K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 590.0
PJD1_k127_1848316_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004652 552.0
PJD1_k127_1848316_10 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.00000000000000000000000000003554 124.0
PJD1_k127_1848316_11 Protein of unknown function (DUF3617) - - - 0.0000005729 58.0
PJD1_k127_1848316_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007489 403.0
PJD1_k127_1848316_3 glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 376.0
PJD1_k127_1848316_4 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 283.0
PJD1_k127_1848316_6 overlaps another CDS with the same product name K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.00000000000000000000000000000000000000000000005358 170.0
PJD1_k127_1848316_7 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000005379 153.0
PJD1_k127_1848316_8 SMART Sel1 domain protein repeat-containing protein K07126 - - 0.000000000000000000000000000000000000001414 157.0
PJD1_k127_1848316_9 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000567 123.0
PJD1_k127_1864679_0 pterin-4-alpha-carbinolamine dehydratase K01724 GO:0003674,GO:0003824,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008124,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019438,GO:0019751,GO:0034311,GO:0034312,GO:0034641,GO:0042558,GO:0042559,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 4.2.1.96 0.00000000000000000000000000000000000000000000000009969 179.0
PJD1_k127_1864679_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K00082 - 1.1.1.193 0.0000000000000000000000000000000000000000595 162.0
PJD1_k127_1864679_2 Low affinity iron permease - - - 0.00000000000000000000000000000000000004643 146.0
PJD1_k127_187131_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 516.0
PJD1_k127_187131_1 Copper resistance protein B precursor (CopB) K07233 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 315.0
PJD1_k127_187131_2 Copper-binding protein - - - 0.00000000000000000000000000000000000000000000000000000002995 197.0
PJD1_k127_1873624_0 Glucokinase K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002744 274.0
PJD1_k127_1873624_1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000004412 243.0
PJD1_k127_1873624_2 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000000001462 171.0
PJD1_k127_1877554_0 tRNA thio-modification K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 564.0
PJD1_k127_1877554_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 500.0
PJD1_k127_1877554_10 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000001179 113.0
PJD1_k127_1877554_12 - - - - 0.0000000000002807 77.0
PJD1_k127_1877554_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000476 433.0
PJD1_k127_1877554_3 pectinesterase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 432.0
PJD1_k127_1877554_4 carboxylic acid catabolic process K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009786 328.0
PJD1_k127_1877554_5 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004284 280.0
PJD1_k127_1877554_6 Cytochrome c K00405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001151 267.0
PJD1_k127_1877554_7 - K11477 - - 0.000000000000000000000000000000000000000000000000000000000000000002717 230.0
PJD1_k127_1877554_8 DDE superfamily endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000002012 209.0
PJD1_k127_1930051_0 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K06147,K11085 - - 1.662e-246 772.0
PJD1_k127_1930051_1 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 310.0
PJD1_k127_1930051_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000004737 267.0
PJD1_k127_1940671_0 lytic transglycosylase activity K08306,K08308,K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009279,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0019867,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031224,GO:0031225,GO:0031975,GO:0033554,GO:0034599,GO:0042221,GO:0042597,GO:0043170,GO:0044425,GO:0044462,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0061783,GO:0070887,GO:0071236,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005234 548.0
PJD1_k127_1940671_1 lactoylglutathione lyase activity K01759 GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0050896 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000003675 231.0
PJD1_k127_1940671_2 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000008088 226.0
PJD1_k127_1940671_3 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000158 73.0
PJD1_k127_1954028_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 1.741e-282 873.0
PJD1_k127_1954028_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 2.967e-226 711.0
PJD1_k127_1954028_10 YaeQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002206 263.0
PJD1_k127_1954028_11 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001385 263.0
PJD1_k127_1954028_12 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K06142 - - 0.0000000000000000000000000000000000000000000000000000000000000000003904 233.0
PJD1_k127_1954028_13 endonuclease activity K03465 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.1.1.148 0.0000000000000000000000000000000000000000000000000001761 186.0
PJD1_k127_1954028_14 Rhodanese-like domain - - - 0.0000000000000000000000000000000000000000000000001833 179.0
PJD1_k127_1954028_15 translation initiation factor activity K03113 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0002190,GO:0002192,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0110017,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000003277 174.0
PJD1_k127_1954028_16 belongs to the thioredoxin family K00384,K03671 - 1.8.1.9 0.00000000000000000000000000000000001314 138.0
PJD1_k127_1954028_17 conserved protein (DUF2132) K06867 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363 - 0.000000000000000000000000000000002968 130.0
PJD1_k127_1954028_19 toxin-antitoxin pair type II binding K19159 - - 0.0000000000000000000000001977 108.0
PJD1_k127_1954028_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 9.157e-197 621.0
PJD1_k127_1954028_20 - - - - 0.0000000000000000000000003327 105.0
PJD1_k127_1954028_21 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.0000000000006593 71.0
PJD1_k127_1954028_24 Glucose sorbosone - - - 0.0003415 46.0
PJD1_k127_1954028_3 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009041 607.0
PJD1_k127_1954028_4 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 597.0
PJD1_k127_1954028_5 D-gluconate metabolic process K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 517.0
PJD1_k127_1954028_6 L-allo-threonine aldolase activity K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 480.0
PJD1_k127_1954028_7 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 458.0
PJD1_k127_1954028_8 protein-(glutamine-N5) methyltransferase activity K00543,K16130,K18896,K18897,K21515 - 2.1.1.156,2.1.1.157,2.1.1.209,2.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 430.0
PJD1_k127_1954028_9 nucleotidyltransferase activity K17882 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 331.0
PJD1_k127_1960942_0 LemA family K03744 - - 0.0000000000000000000000000000000000000000000007265 170.0
PJD1_k127_1960942_1 E3 Ubiquitin ligase - - - 0.000000000000000001946 98.0
PJD1_k127_1960942_3 Transcription factor zinc-finger - - - 0.00004868 55.0
PJD1_k127_1973044_0 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 0.0 1277.0
PJD1_k127_1973044_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 4.62e-206 651.0
PJD1_k127_1973044_10 response regulator - - - 0.0000000000009113 76.0
PJD1_k127_1973044_3 phosphonoacetaldehyde hydrolase activity K20881 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 338.0
PJD1_k127_1973044_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001082 284.0
PJD1_k127_1973044_5 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001782 283.0
PJD1_k127_1973044_6 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001527 277.0
PJD1_k127_1973044_8 Sel1-like repeats. - - - 0.00000000000000000000000000000002866 132.0
PJD1_k127_1973044_9 AntiSigma factor - - - 0.00000000000000000000005296 105.0
PJD1_k127_2002208_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 3.336e-263 814.0
PJD1_k127_2002208_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 6.923e-217 676.0
PJD1_k127_2002208_2 PFAM transposase IS116 IS110 IS902 family K07486 - - 0.0000017 50.0
PJD1_k127_200843_0 Surface antigen K07277 - - 0.0 1143.0
PJD1_k127_200843_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K06142 - - 0.00000000000000000000000000000000000000000000000000000000007613 210.0
PJD1_k127_2022607_0 glutamate-tRNA ligase activity K01886 GO:0003674,GO:0003824,GO:0004812,GO:0004819,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006425,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.18 6.392e-304 938.0
PJD1_k127_2022607_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001078 229.0
PJD1_k127_2051964_0 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 462.0
PJD1_k127_2104501_0 TonB-dependent receptor K02014 - - 0.0 1045.0
PJD1_k127_2104501_1 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 389.0
PJD1_k127_2104501_10 recombinase activity - - - 0.0000000000000005378 79.0
PJD1_k127_2104501_11 positive regulation of growth - - - 0.000000000000001213 79.0
PJD1_k127_2104501_2 transposase and inactivated derivatives, IS30 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 329.0
PJD1_k127_2104501_3 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 327.0
PJD1_k127_2104501_4 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002139 252.0
PJD1_k127_2104501_5 bacteriocin transport K03561,K03562 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0017038,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000001411 220.0
PJD1_k127_2104501_6 cell redox homeostasis - - - 0.0000000000000000000000000000000000000000000000000000000000003487 214.0
PJD1_k127_2104501_7 transposase and inactivated derivatives, IS30 family - - - 0.0000000000000000000000000000000000000000003938 159.0
PJD1_k127_2104501_8 PIN domain - - - 0.000000000000000000000000000000000000005008 150.0
PJD1_k127_2104501_9 biopolymer transport protein K03559 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000001805 111.0
PJD1_k127_2109009_0 Nitrogen regulatory protein P-II K04751 - - 0.00000000000000000000000000001799 121.0
PJD1_k127_2109009_1 helix_turn_helix, Lux Regulon - - - 0.00000000008223 66.0
PJD1_k127_2109009_2 peptidase - - - 0.0000000001038 65.0
PJD1_k127_2109009_3 Protein of unknown function (DUF2934) - - - 0.00009998 48.0
PJD1_k127_2143964_0 AAA domain - - - 0.0 1215.0
PJD1_k127_215369_2 DNA-binding transcription factor activity - - - 0.00000000000000000000000000000000000000000002735 169.0
PJD1_k127_2155905_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1112.0
PJD1_k127_2155905_1 helicase activity K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003777 565.0
PJD1_k127_2155905_3 PFAM NapC NirT cytochrome c K02569 - - 0.000000000000000000000000000000000000000000000000000004514 192.0
PJD1_k127_2155905_4 RNA recognition motif - - - 0.0000000000000000000000000000000000000000002862 161.0
PJD1_k127_2155905_5 Domain of unknown function (DUF4321) - - - 0.00000000000000000000000000003174 118.0
PJD1_k127_216722_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 549.0
PJD1_k127_216722_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 516.0
PJD1_k127_216722_2 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 474.0
PJD1_k127_216722_3 Chemotaxis protein methyltransferase K00575 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006479,GO:0006807,GO:0006935,GO:0008022,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0008983,GO:0009605,GO:0009987,GO:0010340,GO:0016020,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0032991,GO:0036211,GO:0040011,GO:0042221,GO:0042330,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051998,GO:0071704,GO:0071944,GO:0098561,GO:0140096,GO:1901564 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005038 422.0
PJD1_k127_216722_4 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411,K03412 GO:0006935,GO:0008150,GO:0009605,GO:0040011,GO:0042221,GO:0042330,GO:0050896 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 300.0
PJD1_k127_216722_5 antisigma factor binding - - - 0.0000000000000000000000000000001253 127.0
PJD1_k127_223843_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.824e-194 620.0
PJD1_k127_223843_1 Glutathione S-transferase K00799,K07393 GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016491,GO:0016667,GO:0016672,GO:0016740,GO:0016765,GO:0042221,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.8.5.7,2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009329 449.0
PJD1_k127_223843_2 PFAM TrkA-C domain protein K11105 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 409.0
PJD1_k127_223843_3 Putative neutral zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000000000000000000000000000000000000007215 239.0
PJD1_k127_2243940_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000004728 236.0
PJD1_k127_2243940_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000004981 230.0
PJD1_k127_2243940_2 Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides K01784,K10011 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006040,GO:0006139,GO:0006725,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016741,GO:0016742,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0022607,GO:0033319,GO:0033320,GO:0034214,GO:0034641,GO:0034654,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046349,GO:0046483,GO:0046677,GO:0048037,GO:0048040,GO:0050662,GO:0050896,GO:0051259,GO:0051287,GO:0055086,GO:0055114,GO:0065003,GO:0070403,GO:0071704,GO:0071840,GO:0097159,GO:0099618,GO:0099619,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:2001313,GO:2001315 1.1.1.305,2.1.2.13,5.1.3.2 0.0000000000000000000000000000000157 139.0
PJD1_k127_233632_0 PFAM NapC NirT cytochrome c K02569 - - 0.000000000000000000000000000000000000000000000000000001161 193.0
PJD1_k127_233632_1 Vitamin K epoxide reductase family - - - 0.0000000000000000000000000000000000004429 145.0
PJD1_k127_2378544_0 ANTAR - - - 7.62e-211 663.0
PJD1_k127_2378544_1 ABC-type branched-chain amino acid transport systems, periplasmic component K01999,K11959 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005325 606.0
PJD1_k127_2378544_10 Histidine kinase K07683 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000006723 248.0
PJD1_k127_2378544_11 urea catabolic process K01430 - 3.5.1.5 0.0000000000000000000000000000000000000000001454 160.0
PJD1_k127_2378544_12 Belongs to the urease beta subunit family K01429,K14048 - 3.5.1.5 0.00000000000000000000000000000000000000001383 158.0
PJD1_k127_2378544_13 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 GO:0008150,GO:0040007 3.5.1.5 0.0000000000000002059 82.0
PJD1_k127_2378544_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007349 477.0
PJD1_k127_2378544_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 436.0
PJD1_k127_2378544_4 short chain amide porin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 387.0
PJD1_k127_2378544_5 Belongs to the binding-protein-dependent transport system permease family K11961 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 381.0
PJD1_k127_2378544_6 Urea ABC transporter permease K11960 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 365.0
PJD1_k127_2378544_7 TIGRFAM ABC transporter, urea, ATP-binding protein, UrtD K11962 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 317.0
PJD1_k127_2378544_8 response regulator K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005932 280.0
PJD1_k127_2378544_9 TIGRFAM urea ABC transporter, ATP-binding protein UrtE K11963 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001711 248.0
PJD1_k127_238408_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 2.016e-232 723.0
PJD1_k127_238408_1 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008095 579.0
PJD1_k127_238408_2 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 462.0
PJD1_k127_238408_3 chaperone-mediated protein folding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 438.0
PJD1_k127_238408_4 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000001384 234.0
PJD1_k127_238408_5 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000001113 213.0
PJD1_k127_2390901_0 Rubrerythrin K22405 - 1.6.3.4 0.0 1199.0
PJD1_k127_2390901_1 Elongator protein 3, MiaB family, Radical SAM - - - 7.566e-319 979.0
PJD1_k127_2390901_10 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000129 269.0
PJD1_k127_2390901_12 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000000000000000000000000000000000000000005062 190.0
PJD1_k127_2390901_13 - - - - 0.000000000000000000000000000000000000000000000000002504 184.0
PJD1_k127_2390901_15 Cytochrome c - - - 0.00000000000000000000000000000003495 141.0
PJD1_k127_2390901_2 Iron-sulfur cluster-binding domain - - - 1.307e-284 876.0
PJD1_k127_2390901_3 Tetratricopeptide repeat - - - 2.673e-217 703.0
PJD1_k127_2390901_4 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 536.0
PJD1_k127_2390901_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 472.0
PJD1_k127_2390901_6 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 418.0
PJD1_k127_2390901_7 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 357.0
PJD1_k127_2390901_8 sirohydrochlorin cobaltochelatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 297.0
PJD1_k127_2390901_9 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000001386 261.0
PJD1_k127_2405035_0 hemolysin activation secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 526.0
PJD1_k127_2405089_0 Amino acid adenylation domain - - - 0.0 1781.0
PJD1_k127_2405089_1 microcin transport K06160 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 548.0
PJD1_k127_2405089_2 Anti-sigma-K factor rskA K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006555 347.0
PJD1_k127_2405089_3 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008726 253.0
PJD1_k127_2405089_4 PRMT5 arginine-N-methyltransferase K11434 - 2.1.1.319 0.0000000000000000000000000000000000000000000000000205 192.0
PJD1_k127_2405089_5 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000000000002556 186.0
PJD1_k127_2405089_6 Belongs to the P-Pant transferase superfamily K06133 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008897,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0019752,GO:0019878,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.0000000000000000000000000000000001122 143.0
PJD1_k127_2405089_7 lipoprotein transporter activity - - - 0.000000000000000000000000000002728 133.0
PJD1_k127_2405089_8 Uncharacterised nucleotidyltransferase - - - 0.000000000000000003289 97.0
PJD1_k127_2414399_0 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008833 485.0
PJD1_k127_2414399_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 452.0
PJD1_k127_2414399_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 449.0
PJD1_k127_2414399_3 Protein of unknown function (DUF1009) K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 419.0
PJD1_k127_2414399_4 ABC transporter, transmembrane region K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000005095 203.0
PJD1_k127_2414399_5 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000009343 128.0
PJD1_k127_24150_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1118.0
PJD1_k127_24150_1 regulation of DNA repair K03565,K19002 GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0019899,GO:0031668,GO:0033554,GO:0043086,GO:0044092,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496 2.4.1.337 0.000000000000000000004727 96.0
PJD1_k127_2424730_0 pyruvate decarboxylase activity K04103 - 4.1.1.74 4.728e-278 862.0
PJD1_k127_2424730_1 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 544.0
PJD1_k127_2424730_2 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006114 482.0
PJD1_k127_2424730_3 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 458.0
PJD1_k127_2424730_4 Thioredoxin-like domain K03671 - - 0.000000000000000000000000000000000000000000000000000000000009335 210.0
PJD1_k127_2424730_5 sequence-specific DNA binding - - - 0.0000000000000000000000000002083 115.0
PJD1_k127_2436162_0 Putative Ig domain - - - 0.0000000000000000000000000000000000000000007643 171.0
PJD1_k127_2436162_1 - - - - 0.000000000000000000000000000001951 122.0
PJD1_k127_2447903_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.266e-210 660.0
PJD1_k127_2447903_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 564.0
PJD1_k127_2447903_10 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078,K05553 - - 0.0000000000000000000000000002653 118.0
PJD1_k127_2447903_2 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005455 494.0
PJD1_k127_2447903_3 Predicted permease YjgP/YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006226 496.0
PJD1_k127_2447903_4 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 481.0
PJD1_k127_2447903_5 Predicted permease YjgP/YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000803 449.0
PJD1_k127_2447903_6 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 420.0
PJD1_k127_2447903_7 tRNA (guanine(37)-N(1))-methyltransferase activity K01091,K01633,K15429 - 1.13.11.81,2.1.1.228,3.1.3.18,4.1.2.25,5.1.99.8 0.0000000000000000000000000000000000000000000000000000007486 199.0
PJD1_k127_2447903_9 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000000000000322 134.0
PJD1_k127_2472107_0 response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003845 422.0
PJD1_k127_2472107_1 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 440.0
PJD1_k127_2472107_2 Caspase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 387.0
PJD1_k127_2472107_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001593 255.0
PJD1_k127_2472107_4 spore germination - - - 0.000000145 54.0
PJD1_k127_2482247_0 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 2.07e-269 839.0
PJD1_k127_2482247_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 1.454e-249 777.0
PJD1_k127_2482247_10 Cell cycle protein K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 537.0
PJD1_k127_2482247_11 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 524.0
PJD1_k127_2482247_12 Cell wall formation K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 467.0
PJD1_k127_2482247_13 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 459.0
PJD1_k127_2482247_14 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007751 436.0
PJD1_k127_2482247_15 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 417.0
PJD1_k127_2482247_16 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 394.0
PJD1_k127_2482247_17 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 353.0
PJD1_k127_2482247_18 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 336.0
PJD1_k127_2482247_19 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000484 332.0
PJD1_k127_2482247_2 phosphorelay signal transduction system K02667 - - 1.933e-241 751.0
PJD1_k127_2482247_20 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 328.0
PJD1_k127_2482247_21 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 342.0
PJD1_k127_2482247_22 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 286.0
PJD1_k127_2482247_23 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003266 285.0
PJD1_k127_2482247_24 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K16079 - - 0.000000000000000000000000000000000000000000000000000000000000000000001011 241.0
PJD1_k127_2482247_25 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.000000000000000000000000000000000000000000000000000000000000002022 222.0
PJD1_k127_2482247_26 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K01921,K03589,K06438 GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0032506,GO:0040007,GO:0042802,GO:0043093,GO:0044085,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000111 209.0
PJD1_k127_2482247_27 DivIVA protein K04074 - - 0.0000000000000000000000000000000000000000000000000000002937 198.0
PJD1_k127_2482247_29 YGGT family K02221 - - 0.000000000000000000000000000000000000001857 149.0
PJD1_k127_2482247_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 4.262e-220 687.0
PJD1_k127_2482247_30 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000003579 111.0
PJD1_k127_2482247_4 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 8.796e-212 668.0
PJD1_k127_2482247_5 Type II secretion system (T2SS), protein F K02455,K02653 - - 1.812e-205 644.0
PJD1_k127_2482247_6 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 7.631e-200 629.0
PJD1_k127_2482247_7 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 3.974e-196 623.0
PJD1_k127_2482247_8 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 604.0
PJD1_k127_2482247_9 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 604.0
PJD1_k127_2488809_0 aerobic electron transport chain K00425,K08738 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 610.0
PJD1_k127_2488809_1 Domain of unknown function (DUF3463) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 459.0
PJD1_k127_2488809_2 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006477 245.0
PJD1_k127_2488809_4 - - - - 0.000000000000000000000000000000000000000002556 160.0
PJD1_k127_249973_0 Protein of unknown function (DUF1614) - - - 0.0000000000000000000000000000002258 126.0
PJD1_k127_2513659_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1060.0
PJD1_k127_2513659_1 Belongs to the pseudouridine synthase RsuA family K06178,K06181,K06182 - 5.4.99.20,5.4.99.21,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 391.0
PJD1_k127_2513659_2 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000001201 85.0
PJD1_k127_2513659_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000006164 65.0
PJD1_k127_2516670_0 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.0 1069.0
PJD1_k127_2516670_1 AMP binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 324.0
PJD1_k127_2516670_2 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000000000002576 194.0
PJD1_k127_2516670_3 Belongs to the universal stress protein A family - - - 0.0000000002149 65.0
PJD1_k127_2521088_0 metallopeptidase activity K03568 - - 1.738e-258 803.0
PJD1_k127_2521088_1 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005833 593.0
PJD1_k127_2521088_12 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000001488 95.0
PJD1_k127_2521088_14 - - - - 0.0000000000000316 75.0
PJD1_k127_2521088_2 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 591.0
PJD1_k127_2521088_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005894 355.0
PJD1_k127_2521088_4 peptide-methionine (S)-S-oxide reductase activity K07304,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 286.0
PJD1_k127_2521088_5 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000443 196.0
PJD1_k127_2521088_6 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000001236 183.0
PJD1_k127_2521088_7 Late embryogenesis abundant protein - - - 0.0000000000000000000000000000000000000000000001005 173.0
PJD1_k127_2521088_8 - K07275 - - 0.000000000000000000000000000000000000002371 156.0
PJD1_k127_2521088_9 Transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.0000000000000000000000000000000001093 135.0
PJD1_k127_2523139_0 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 462.0
PJD1_k127_2523139_1 PRC-barrel domain - - - 0.000000000000000000000000000494 121.0
PJD1_k127_2523139_2 - - - - 0.000000000000001586 79.0
PJD1_k127_2523139_4 - - - - 0.0000000000004866 72.0
PJD1_k127_2523139_5 HtrA serine peptidase 4 K08784,K08786 - - 0.000000000001085 81.0
PJD1_k127_2523139_6 Belongs to the TPP enzyme family K00156 - 1.2.5.1 0.0000000004272 63.0
PJD1_k127_2523139_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000086 66.0
PJD1_k127_2523139_8 ErfK ybiS ycfS ynhG family protein - - - 0.00000006349 57.0
PJD1_k127_2523139_9 Tetratricopeptide repeat - - - 0.000008924 58.0
PJD1_k127_2525679_0 - K06921 - - 0.00007541 53.0
PJD1_k127_2572531_0 Surface antigen - - - 3.524e-199 626.0
PJD1_k127_2572531_1 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 391.0
PJD1_k127_2572531_2 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 367.0
PJD1_k127_2572531_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07323 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007839 249.0
PJD1_k127_2572531_4 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000005426 215.0
PJD1_k127_2572531_5 long-chain fatty acid transporting porin activity - - - 0.00000000000006612 76.0
PJD1_k127_2595815_0 1,4-alpha-glucan branching enzyme activity K00700,K01236 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0071704,GO:1901576 2.4.1.18,3.2.1.141 4.991e-312 972.0
PJD1_k127_2595815_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K01115 - 3.1.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 442.0
PJD1_k127_2595815_2 ATPase involved in DNA repair K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007989 347.0
PJD1_k127_2595815_3 Peptidase M15 K02395 - - 0.00000000000000000000000000000000000000000000000000000000000185 214.0
PJD1_k127_2613845_0 protein tyrosine kinase activity K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 545.0
PJD1_k127_2613845_1 Proto-chlorophyllide reductase 57 kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 416.0
PJD1_k127_2613845_2 Transcriptional regulator - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 410.0
PJD1_k127_2613845_3 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005124 275.0
PJD1_k127_2613845_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000007388 259.0
PJD1_k127_2613845_5 addiction module antidote protein HigA K21498 - - 0.0000000000000000000000000000000000000008661 149.0
PJD1_k127_263745_0 Type II/IV secretion system protein K02454,K02652 - - 0.0 1223.0
PJD1_k127_263745_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 9.665e-274 851.0
PJD1_k127_263745_10 PFAM Integrase catalytic - - - 0.00003641 51.0
PJD1_k127_263745_11 Winged helix-turn helix - - - 0.00006935 45.0
PJD1_k127_263745_2 Putative modulator of DNA gyrase K03568 - - 1.132e-208 655.0
PJD1_k127_263745_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 1.164e-196 618.0
PJD1_k127_263745_4 Peptidase family M50 K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 566.0
PJD1_k127_263745_5 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 402.0
PJD1_k127_263745_6 Cytidylyltransferase family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000007684 270.0
PJD1_k127_263745_7 Winged helix-turn helix - - - 0.0000000000000000000000000000000000000000000000000000000000001885 219.0
PJD1_k127_263745_8 DDE superfamily endonuclease - - - 0.0000000000000000003837 95.0
PJD1_k127_2657785_0 xylulokinase activity K00854 - 2.7.1.17 0.0 1059.0
PJD1_k127_2657785_1 - - - - 1.211e-195 619.0
PJD1_k127_2657785_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008779 557.0
PJD1_k127_2657785_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 483.0
PJD1_k127_2657785_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 401.0
PJD1_k127_2657785_5 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 382.0
PJD1_k127_2657785_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 372.0
PJD1_k127_2657785_8 - - - - 0.00000000000000000000000000000000006321 137.0
PJD1_k127_2675749_0 HI0933 family K07007 - - 2.389e-196 618.0
PJD1_k127_2675749_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 441.0
PJD1_k127_2675749_2 Phosphoesterase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 308.0
PJD1_k127_2696170_0 glycosyltransferase 36 associated K00702,K13688 - 2.4.1.20 0.0 1670.0
PJD1_k127_2696170_1 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 537.0
PJD1_k127_2696170_11 RNA-binding protein - - - 0.000000000005268 69.0
PJD1_k127_2696170_2 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 413.0
PJD1_k127_2696170_3 methyltransferase K16129 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 386.0
PJD1_k127_2696170_4 hmm pf02371 K07486 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 338.0
PJD1_k127_2696170_5 DDE superfamily endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000002811 231.0
PJD1_k127_2696170_6 DDE superfamily endonuclease K07494 - - 0.0000000000000000000000000000000000000000000000003755 188.0
PJD1_k127_2696170_7 RNA recognition motif - - - 0.00000000000000000000000000000000000000000000516 167.0
PJD1_k127_2696170_8 Transposase - - - 0.0000000000000000000000000000001377 129.0
PJD1_k127_2705459_0 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 481.0
PJD1_k127_2705459_1 pectinesterase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 435.0
PJD1_k127_2705459_13 MULE transposase domain - - - 0.000003691 51.0
PJD1_k127_2705459_14 krueppel associated box - - - 0.0009065 44.0
PJD1_k127_2705459_2 AAA domain, putative AbiEii toxin, Type IV TA system K09817,K09820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 420.0
PJD1_k127_2705459_3 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 412.0
PJD1_k127_2705459_4 ABC 3 transport family K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 397.0
PJD1_k127_2705459_5 Zinc-uptake complex component A periplasmic K09815,K09818 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004961 372.0
PJD1_k127_2705459_6 DDE superfamily endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000227 256.0
PJD1_k127_2705459_7 protein trimerization - - - 0.000000000000000000000000000000000000000000000000000001036 196.0
PJD1_k127_2705459_8 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000001429 184.0
PJD1_k127_2705459_9 Nucleotidyltransferase substrate binding protein like - - - 0.000000000000000000000000000000001051 134.0
PJD1_k127_2705816_0 DNA replication proofreading K02336,K06877 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 459.0
PJD1_k127_2707610_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 2.105e-221 704.0
PJD1_k127_2707610_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008456 344.0
PJD1_k127_2707610_2 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03673 GO:0003674,GO:0003756,GO:0003824,GO:0005575,GO:0005623,GO:0006457,GO:0008150,GO:0008152,GO:0009987,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071236,GO:0140096 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008366 266.0
PJD1_k127_2707610_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07285 - - 0.00000000000000000000000000000000000000000000000001062 186.0
PJD1_k127_271192_0 FtsX-like permease family K02004 - - 9.324e-273 859.0
PJD1_k127_271192_1 lipoprotein transporter activity K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003102 337.0
PJD1_k127_271192_2 transposase and inactivated derivatives, IS30 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 306.0
PJD1_k127_271192_3 lipolytic protein G-D-S-L family K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000002311 255.0
PJD1_k127_275407_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1026.0
PJD1_k127_275407_1 The M ring may be actively involved in energy transduction K02409 - - 1.048e-224 706.0
PJD1_k127_275407_10 phosphorelay sensor kinase activity K07708,K07710,K10942 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 436.0
PJD1_k127_275407_11 FliG middle domain K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 424.0
PJD1_k127_275407_12 Cellulose biosynthesis protein BcsQ K04562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 361.0
PJD1_k127_275407_13 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 358.0
PJD1_k127_275407_14 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006707 374.0
PJD1_k127_275407_15 Plays a role in the flagellum-specific transport system K02419 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006415 349.0
PJD1_k127_275407_16 Sigma-70, region 4 K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 342.0
PJD1_k127_275407_17 Flagellar basal body rod FlgEFG protein C-terminal K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 335.0
PJD1_k127_275407_18 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009583 333.0
PJD1_k127_275407_19 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004171 328.0
PJD1_k127_275407_2 Bacterial regulatory protein, Fis family K10943 - - 1.623e-210 662.0
PJD1_k127_275407_20 phosphorelay signal transduction system K02411,K03223,K03413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005877 284.0
PJD1_k127_275407_21 SRP54-type protein, GTPase domain K02404 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002072 267.0
PJD1_k127_275407_22 Belongs to the flagella basal body rod proteins family K02388 - - 0.000000000000000000000000000000000000000000000000000000000000000000001656 238.0
PJD1_k127_275407_23 bacterial-type flagellum organization K02279,K02386 - - 0.000000000000000000000000000000000000000000000000000001446 201.0
PJD1_k127_275407_24 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000005447 195.0
PJD1_k127_275407_25 -acetyltransferase - - - 0.000000000000000000000000000000000000000000000000004474 190.0
PJD1_k127_275407_26 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.0000000000000000000000000000000000000000000000002319 179.0
PJD1_k127_275407_27 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000000000000001552 180.0
PJD1_k127_275407_28 Type III flagellar switch regulator (C-ring) FliN C-term K02417 - - 0.0000000000000000000000000000000000000000001902 161.0
PJD1_k127_275407_29 GGDEF domain K13590 - 2.7.7.65 0.000000000000000000000000000000000001415 150.0
PJD1_k127_275407_3 ATP synthase alpha/beta family, beta-barrel domain K02412 - 3.6.3.14 7.164e-200 631.0
PJD1_k127_275407_30 flagellar biosynthetic protein FliR K02421 - - 0.000000000000000000000000000000001561 139.0
PJD1_k127_275407_31 Role in flagellar biosynthesis K02420 - - 0.00000000000000000000000000000385 121.0
PJD1_k127_275407_32 PFAM MgtE intracellular K02383 - - 0.0000000000000000000000000004081 122.0
PJD1_k127_275407_33 bacterial-type flagellum organization K02398 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0009892,GO:0010556,GO:0010605,GO:0016989,GO:0019219,GO:0019222,GO:0030162,GO:0031323,GO:0031324,GO:0031326,GO:0032268,GO:0032269,GO:0045861,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.000000000000000000000000342 108.0
PJD1_k127_275407_34 Flagellar hook-basal body complex protein FliE K02408 - - 0.0000000000000000000000008835 106.0
PJD1_k127_275407_35 flagellar hook K02389 - - 0.00000000000000000000004508 101.0
PJD1_k127_275407_36 Flagellar basal body rod FlgEFG protein C-terminal K02396 - - 0.0000000000000000000000509 100.0
PJD1_k127_275407_37 flagellar K02418,K02419 - - 0.000000000000000002988 90.0
PJD1_k127_275407_38 Flagellar rod assembly protein muramidase FlgJ K02395,K08309 - - 0.00000000000000003858 86.0
PJD1_k127_275407_39 Protein conserved in bacteria - - - 0.00000004397 59.0
PJD1_k127_275407_4 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00322,K00382 - 1.6.1.1,1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 606.0
PJD1_k127_275407_5 phosphorelay signal transduction system K10941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 598.0
PJD1_k127_275407_6 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005375 587.0
PJD1_k127_275407_7 Flagellar basal body protein FlaE K02390 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 522.0
PJD1_k127_275407_8 Flagellar basal body rod FlgEFG protein C-terminal K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 487.0
PJD1_k127_275407_9 Flagellar motor switch protein FliM K02416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000088 456.0
PJD1_k127_27658_0 Uncharacterized protein conserved in bacteria (DUF2309) K09822 - - 0.0 1473.0
PJD1_k127_27658_1 Nitrite and sulphite reductase 4Fe-4S domain K00362,K00392 - 1.7.1.15,1.8.7.1 0.0 1273.0
PJD1_k127_27658_11 Glycosyl transferase family, a/b domain K00766 - 2.4.2.18 0.00000000000000000000000000000000003383 137.0
PJD1_k127_27658_2 NADH-quinone oxidoreductase K00341,K05577 - 1.6.5.3 1.469e-236 743.0
PJD1_k127_27658_3 NADH-quinone oxidoreductase K00341,K05577 - 1.6.5.3 5.822e-228 719.0
PJD1_k127_27658_4 Uncharacterized ACR, YdiU/UPF0061 family K08997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003621 401.0
PJD1_k127_27658_5 sulfate reduction K00390,K00860 GO:0003674,GO:0003824,GO:0004604,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016667,GO:0016671,GO:0044424,GO:0044464,GO:0055114 1.8.4.10,1.8.4.8,2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 364.0
PJD1_k127_27658_6 NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00342 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 313.0
PJD1_k127_27658_7 Evidence 2b Function of strongly homologous gene - - - 0.0000000000000000000000000000000000000000000000000000001851 195.0
PJD1_k127_27658_8 2 iron, 2 sulfur cluster binding K04487,K13643 - 2.8.1.7 0.00000000000000000000000000000000000000000000000008597 181.0
PJD1_k127_27658_9 Uncharacterized conserved protein (DUF2294) - - - 0.000000000000000000000000000000000000000000000009686 173.0
PJD1_k127_277140_0 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004238 473.0
PJD1_k127_277140_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 385.0
PJD1_k127_277140_2 cobalamin synthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000318 218.0
PJD1_k127_277140_3 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000005858 181.0
PJD1_k127_2781143_0 response regulator K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003002 252.0
PJD1_k127_2781143_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000008274 229.0
PJD1_k127_2781143_2 response regulator K02282 - - 0.00000000000000000000006937 102.0
PJD1_k127_28105_0 Protein involved in response to NO K07234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 533.0
PJD1_k127_28105_1 Belongs to the aldehyde dehydrogenase family K00128,K00130,K00146,K10217 - 1.2.1.3,1.2.1.32,1.2.1.39,1.2.1.8,1.2.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 352.0
PJD1_k127_28105_2 ACT domain - - - 0.0000000000000000000000000001804 121.0
PJD1_k127_28105_3 - K07184,K07777,K12065,K13527 - 2.7.13.3 0.00000000000000001203 90.0
PJD1_k127_2816841_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 6.009e-275 853.0
PJD1_k127_2816841_1 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 7.147e-246 766.0
PJD1_k127_2816841_2 Tetratricopeptide repeat - - - 4.814e-215 683.0
PJD1_k127_2816841_3 Evidence 2b Function of strongly homologous gene - - - 3.61e-208 651.0
PJD1_k127_2816841_4 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 526.0
PJD1_k127_2816841_5 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0030312,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0071944,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29,2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 477.0
PJD1_k127_2816841_6 Histidyl-tRNA synthetase K02502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008788 441.0
PJD1_k127_2816841_7 cell envelope organization K05807,K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004869 273.0
PJD1_k127_2816841_8 Prokaryotic N-terminal methylation motif K02650 GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 - 0.00000000002966 64.0
PJD1_k127_286062_0 transporter K07238,K11021,K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 302.0
PJD1_k127_286062_1 Protein of unknown function (DUF3365) - - - 0.00000000000000000000000000000000000000000000029 174.0
PJD1_k127_286062_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K12263 - - 0.0000000000000000000000000000001192 127.0
PJD1_k127_286062_3 ATP-independent chaperone mediated protein folding - - - 0.000000000000000002085 89.0
PJD1_k127_2924658_0 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008925 418.0
PJD1_k127_2924658_1 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 399.0
PJD1_k127_2924658_2 Uncharacterised BCR, YnfA/UPF0060 family - - - 0.000000000000000000000000000000000000000000000000002715 183.0
PJD1_k127_2924658_4 Bacterioferritin (cytochrome b1) K03594 - 1.16.3.1 0.000000000000000000000000000004578 128.0
PJD1_k127_2924658_5 Dodecin K09165 - - 0.0000000000000000000007701 96.0
PJD1_k127_2924658_6 Domain of unknown function (DUF5069) - - - 0.00000000002873 65.0
PJD1_k127_2924658_7 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.00000000006874 63.0
PJD1_k127_294410_0 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP) K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006231 380.0
PJD1_k127_294410_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000000000000000001475 242.0
PJD1_k127_294410_2 photosystem II stabilization K02237 - - 0.00000000000000000000000000000000000000000000000001737 187.0
PJD1_k127_2959168_0 Chase2 domain K01768,K07315 - 3.1.3.3,4.6.1.1 3.79e-249 796.0
PJD1_k127_2959168_1 Evidence 5 No homology to any previously reported sequences K02450,K07126 - - 0.0000000000000000000000000000000000000000000000000002637 191.0
PJD1_k127_2972443_0 RNase_H superfamily K07502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 338.0
PJD1_k127_2972443_2 Cyclophilin-like K09143 - - 0.00000000000000000000000000000000000000000000000000000000004072 207.0
PJD1_k127_2972443_3 protein serine/threonine phosphatase activity K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000008171 186.0
PJD1_k127_2975386_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 1.309e-226 705.0
PJD1_k127_2975386_1 FAD binding domain K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000004704 220.0
PJD1_k127_2975386_2 - - - - 0.00000000000002377 80.0
PJD1_k127_305088_0 Tetratricopeptide repeat - - - 3.462e-227 711.0
PJD1_k127_305088_1 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006672 336.0
PJD1_k127_305088_2 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000002435 154.0
PJD1_k127_305088_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000007078 77.0
PJD1_k127_306563_0 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000004053 110.0
PJD1_k127_306563_1 PFAM Hemerythrin HHE cation binding domain protein - - - 0.000000000000000000005986 99.0
PJD1_k127_306894_0 Sigma-54 interaction domain K15836 - - 7.557e-208 673.0
PJD1_k127_306894_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000212 209.0
PJD1_k127_306894_2 - - - - 0.000000000000000000000000000000000000000000000000002443 188.0
PJD1_k127_306894_4 PFAM Mo-dependent nitrogenase K00232 - 1.3.3.6 0.000539 43.0
PJD1_k127_3171900_0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 372.0
PJD1_k127_3171900_1 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 299.0
PJD1_k127_3172694_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.659e-259 804.0
PJD1_k127_3172694_1 Type II/IV secretion system protein K02454,K02652 - - 1.726e-233 736.0
PJD1_k127_3172694_2 Aminotransferase K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 546.0
PJD1_k127_3172694_3 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 400.0
PJD1_k127_3172694_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 345.0
PJD1_k127_3172694_5 inositol monophosphate 1-phosphatase activity K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000003199 256.0
PJD1_k127_3172694_6 MEKHLA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003312 241.0
PJD1_k127_3179717_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07323 - - 0.00000000000000000000000000000000000000000008786 168.0
PJD1_k127_3191406_0 The glycine cleavage system catalyzes the degradation of glycine K00605,K06980,K22086 - 1.5.99.5,2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 563.0
PJD1_k127_3191406_1 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0018131,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046484,GO:0046872,GO:0046914,GO:0052837,GO:0052838,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005574 488.0
PJD1_k127_3191406_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 447.0
PJD1_k127_3191406_3 photosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 311.0
PJD1_k127_3191406_4 Domain of unknown function (DUF4265) - - - 0.000000000000000000000000000000000000000000000000000000000008152 211.0
PJD1_k127_3191406_5 Cytotoxic translational repressor of toxin-antitoxin stability system - - - 0.000000000000000000000000000000000000000000001824 168.0
PJD1_k127_3191406_6 GGDEF domain - - - 0.000000000000000000000000000000000000000000194 163.0
PJD1_k127_3191406_7 sequence-specific DNA binding K07726 - - 0.0000000000000000000000000000000000000005685 154.0
PJD1_k127_3191406_8 ankyrin 3, node of Ranvier (ankyrin G) - - - 0.0000000000000000000000000000000000000005899 157.0
PJD1_k127_3194887_0 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007266 403.0
PJD1_k127_3194887_1 ATP adenylyltransferase K00988 - 2.7.7.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009179 310.0
PJD1_k127_3194887_2 transcriptional regulator K10914 GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 - 0.0000000001587 74.0
PJD1_k127_3194887_3 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0003962 53.0
PJD1_k127_3208826_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 2.173e-283 891.0
PJD1_k127_3208826_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 5.776e-233 726.0
PJD1_k127_3208826_2 Histidyl-tRNA synthetase K01892 - 6.1.1.21 4.676e-196 618.0
PJD1_k127_3208826_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 1.379e-195 614.0
PJD1_k127_3208826_4 thymidylate synthase (FAD) activity K03465 - 2.1.1.148 0.000000000000000000000000000000000000000000000005452 172.0
PJD1_k127_3208826_5 Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE - - - 0.0000000000000000000000000000000000000001568 152.0
PJD1_k127_3210107_0 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000002508 251.0
PJD1_k127_3210107_2 Cytochrome c K12263 - - 0.000000000000000000000000000003412 124.0
PJD1_k127_3210107_3 Domain of unknown function (DUF202) K00389 - - 0.00000000005103 68.0
PJD1_k127_3213270_0 choline dehydrogenase activity - - - 1.04e-218 692.0
PJD1_k127_3213270_1 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 519.0
PJD1_k127_3213270_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 357.0
PJD1_k127_3213270_3 Protein of unknown function (DUF2442) - - - 0.00000000000000000000000000000000000000001251 155.0
PJD1_k127_3213270_6 Protein of unknown function (DUF2442) - - - 0.0000000000000001005 82.0
PJD1_k127_3218670_0 pilus assembly protein PilW K02672 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 304.0
PJD1_k127_3218670_1 type IV pilus modification protein PilV K02671,K02681,K10927 - - 0.00000000000000000000000000000000000000000000005325 175.0
PJD1_k127_3218670_2 protein transport across the cell outer membrane - - - 0.000000000000000000000000000001709 128.0
PJD1_k127_3220556_0 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 2.068e-284 898.0
PJD1_k127_3220556_1 MOFRL family K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 451.0
PJD1_k127_3220556_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 375.0
PJD1_k127_3220556_3 response regulator K02282 - - 0.000000000000000000000001988 106.0
PJD1_k127_3220556_4 cheY-homologous receiver domain - - - 0.0008535 47.0
PJD1_k127_3227705_0 transposition, DNA-mediated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004721 338.0
PJD1_k127_3227705_1 transposase and inactivated derivatives, IS30 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000005793 230.0
PJD1_k127_3227834_0 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003895 460.0
PJD1_k127_3227834_1 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000000000000000000000000000005058 231.0
PJD1_k127_3227834_2 hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000000001821 196.0
PJD1_k127_3227834_3 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000000000001185 126.0
PJD1_k127_3227834_4 6-phosphogluconolactonase activity - - - 0.0000000000000000000000006542 116.0
PJD1_k127_3227834_5 domain, Protein - - - 0.00000000000000002898 90.0
PJD1_k127_3227834_6 ThiJ PfpI K18199 - 4.2.1.103 0.0002152 45.0
PJD1_k127_3234608_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009014 511.0
PJD1_k127_3234608_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 508.0
PJD1_k127_3234608_2 transposition - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 506.0
PJD1_k127_3234608_3 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003254 263.0
PJD1_k127_3234608_4 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000000007015 229.0
PJD1_k127_3234608_5 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000001787 194.0
PJD1_k127_3234608_6 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000003041 195.0
PJD1_k127_3234608_7 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000000000000000006771 176.0
PJD1_k127_3234608_8 Pfam Integrase core domain - - - 0.0000000007082 61.0
PJD1_k127_3235784_0 Putative modulator of DNA gyrase K03592 - - 3.082e-202 638.0
PJD1_k127_3235784_2 Putative modulator of DNA gyrase K03568 - - 0.00000000000000000000000000000000000000000000000000000000344 199.0
PJD1_k127_3235784_3 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000004035 199.0
PJD1_k127_3254726_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1206.0
PJD1_k127_3254726_1 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.0000000000000000000000004238 108.0
PJD1_k127_3290203_0 glycosyltransferase 36 associated K00702,K13688 - 2.4.1.20 0.0 2181.0
PJD1_k127_3311418_0 metallopeptidase activity K01993,K13408,K16922 - - 2.447e-220 706.0
PJD1_k127_3311418_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993,K16922 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 445.0
PJD1_k127_3311418_2 efflux transmembrane transporter activity K03287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002049 281.0
PJD1_k127_3311418_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000476 271.0
PJD1_k127_3320784_0 Protein of unknown function (DUF3422) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 414.0
PJD1_k127_3320784_1 PFAM O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 338.0
PJD1_k127_3320784_2 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000000000000000000000000000000001999 165.0
PJD1_k127_3320784_3 Uncharacterized ACR, COG1993 K06199,K09137 - - 0.00000000000000000000000000000000001646 138.0
PJD1_k127_3355250_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 4.448e-239 746.0
PJD1_k127_3355250_1 guanyl-nucleotide exchange factor activity - - - 2.004e-225 711.0
PJD1_k127_3355250_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 412.0
PJD1_k127_3355250_3 Photosynthesis system II assembly factor YCF48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 393.0
PJD1_k127_3355250_4 phosphopentomutase activity K01839 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008973,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 5.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006023 364.0
PJD1_k127_3355250_5 deoxyribose-phosphate aldolase activity K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 329.0
PJD1_k127_3355250_6 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000000000000001836 209.0
PJD1_k127_3355250_7 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000005383 145.0
PJD1_k127_3355250_8 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000007651 68.0
PJD1_k127_3373512_0 Oxidoreductase FAD-binding domain K00326 GO:0003674,GO:0003824,GO:0004128,GO:0006091,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016651,GO:0016653,GO:0022900,GO:0044237,GO:0055114 1.6.2.2 0.0000000000000000000000000000000000000000000001585 178.0
PJD1_k127_3373512_1 - - - - 0.000000000000000000000000000000000000000000003303 171.0
PJD1_k127_3373512_2 AMP binding K11932 - - 0.0000000000000000000000000000000000000000001107 164.0
PJD1_k127_3373512_3 - - - - 0.0000000000000000000000000000004042 133.0
PJD1_k127_3383066_0 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 309.0
PJD1_k127_3383066_1 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.000000000000000000000000000000000000000000000000000000000000000000000000001915 260.0
PJD1_k127_3383066_2 PFAM ribonuclease II K01147 - 3.1.13.1 0.000000000000000000000000000000000000000000000000000000000000000000002409 242.0
PJD1_k127_338494_0 Ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 294.0
PJD1_k127_338494_1 - - - - 0.0000000000000000000000000000000003172 136.0
PJD1_k127_338494_2 Biological Process cation transport (GO 0006812), Molecular Function solute hydrogen antiporter activity (GO 0015299), Cellular Component integral to membrane (GO 0016021), Biological Process transmembrane transport (GO 0055085) K03316 - - 0.000000000000000007649 89.0
PJD1_k127_3385317_0 Histidine kinase K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 295.0
PJD1_k127_3385317_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001943 248.0
PJD1_k127_3385317_2 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002491 243.0
PJD1_k127_3385317_3 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.00003723 46.0
PJD1_k127_3399456_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 2046.0
PJD1_k127_3399456_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 5.628e-316 980.0
PJD1_k127_3399456_10 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 374.0
PJD1_k127_3399456_11 Peptidase C26 K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009753 331.0
PJD1_k127_3399456_12 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008742 288.0
PJD1_k127_3399456_13 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005407 284.0
PJD1_k127_3399456_14 ACT domain - - - 0.00000000000000000000000000000000000000000000000000000000004634 207.0
PJD1_k127_3399456_16 LysM domain - - - 0.0000000000000000000000000000000000000000003439 166.0
PJD1_k127_3399456_17 Histidine kinase - - - 0.0000000000000000000000000000000000005693 145.0
PJD1_k127_3399456_18 - - - - 0.0000000000000000000000000000000006363 137.0
PJD1_k127_3399456_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 2.191e-254 791.0
PJD1_k127_3399456_21 PFAM nuclease (SNase domain protein) - - - 0.0000000002574 64.0
PJD1_k127_3399456_3 phosphorelay signal transduction system K02481 - - 1.19e-247 772.0
PJD1_k127_3399456_4 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 6.537e-224 697.0
PJD1_k127_3399456_5 phosphorelay sensor kinase activity K02668,K10942 - 2.7.13.3 9.92e-218 685.0
PJD1_k127_3399456_6 Transporter associated domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007737 598.0
PJD1_k127_3399456_7 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008644 503.0
PJD1_k127_3399456_8 Acetyl-coenzyme A transporter 1 K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009389 507.0
PJD1_k127_3399456_9 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006351 390.0
PJD1_k127_3401556_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1037.0
PJD1_k127_3433611_0 PFAM response regulator receiveR - - - 0.0000000000000000000000000000000000000000000000000000000961 199.0
PJD1_k127_3433611_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000001946 196.0
PJD1_k127_3433611_2 Diguanylate cyclase - - - 0.0000000000000000000000000000008313 132.0
PJD1_k127_3481849_0 protoporphyrinogen oxidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 347.0
PJD1_k127_3481849_2 RNA recognition motif - - - 0.0000000000000000000000000000000000000000000000002649 179.0
PJD1_k127_3481849_4 N-6 DNA Methylase K03427 - 2.1.1.72 0.000601 43.0
PJD1_k127_3486236_0 response regulator K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 339.0
PJD1_k127_3486236_1 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009138 315.0
PJD1_k127_3486236_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000000000000000000000000000000000000000568 228.0
PJD1_k127_3486236_3 Competence-damaged protein K03742,K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000003572 213.0
PJD1_k127_3486236_4 PFAM GGDEF domain containing protein K02488 - 2.7.7.65 0.000000000000000000003864 98.0
PJD1_k127_3486236_5 type II secretion system protein E K02454,K02652 - - 0.000000006662 64.0
PJD1_k127_3486236_6 His Kinase A (phosphoacceptor - - - 0.00008505 48.0
PJD1_k127_3502026_0 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K11206,K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 364.0
PJD1_k127_3502026_1 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 328.0
PJD1_k127_3502026_2 Serine hydrolase K07002,K19073 - 1.3.1.75 0.0000000000000000000000000000000000000000000000000000000000000009923 223.0
PJD1_k127_3502026_3 Nacht domain - - - 0.0000000000000000000000000000000000000005414 157.0
PJD1_k127_3502026_4 - - - - 0.0000000000000000000004061 97.0
PJD1_k127_3502026_5 - - - - 0.00001049 50.0
PJD1_k127_3528549_0 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K06147,K11085 - - 2.146e-271 843.0
PJD1_k127_3528549_1 FAD binding domain K00278 - 1.4.3.16 7.364e-264 821.0
PJD1_k127_3528549_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826,K02619 - 2.6.1.42,4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 415.0
PJD1_k127_3528549_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01665 GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004049,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009308,GO:0009309,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042398,GO:0042401,GO:0042430,GO:0042435,GO:0042558,GO:0042559,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 391.0
PJD1_k127_3528549_4 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001151 260.0
PJD1_k127_3533666_0 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 466.0
PJD1_k127_3533666_1 Pyridoxal phosphate biosynthetic protein PdxA K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 462.0
PJD1_k127_3533666_11 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K10936,K16079 - - 0.000009226 56.0
PJD1_k127_3533666_2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 447.0
PJD1_k127_3533666_3 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005679 443.0
PJD1_k127_3533666_4 dimethylargininase activity K00819 GO:0003674,GO:0003824,GO:0016403,GO:0016787,GO:0016810,GO:0016813 2.6.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 431.0
PJD1_k127_3533666_5 (AIR) carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009955 352.0
PJD1_k127_3533666_6 Ftsk_gamma K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 333.0
PJD1_k127_3533666_7 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002513 286.0
PJD1_k127_3543901_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1546.0
PJD1_k127_3543901_1 phospholipase Carboxylesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 538.0
PJD1_k127_3543901_2 MFS_1 like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 409.0
PJD1_k127_3543901_3 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008574 302.0
PJD1_k127_3543901_5 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000001589 233.0
PJD1_k127_35699_0 ATPase activity - - - 0.0000000000000000000000000000000000000009032 153.0
PJD1_k127_3586647_0 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 288.0
PJD1_k127_3586647_1 positive regulation of acetylcholine metabolic process K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006855 245.0
PJD1_k127_3586647_2 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000002863 170.0
PJD1_k127_3586647_3 AMP binding - - - 0.00000000000000002795 93.0
PJD1_k127_3616250_0 Heat shock 70 kDa protein K04043 - - 0.0 1116.0
PJD1_k127_3616250_1 DnaJ central domain K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006242 419.0
PJD1_k127_3616250_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 358.0
PJD1_k127_3616250_3 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000001417 253.0
PJD1_k127_3616250_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000000000000000000000001326 217.0
PJD1_k127_3616250_5 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000003141 203.0
PJD1_k127_3616250_6 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000904 175.0
PJD1_k127_3631734_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005332 512.0
PJD1_k127_3631734_1 6-phosphogluconolactonase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007046 361.0
PJD1_k127_3631734_2 - - - - 0.0000000000000000000000000000000000000000000000000000000008072 204.0
PJD1_k127_3631734_3 Methylenetetrahydrofolate reductase - - - 0.0000000000000000000000000000000000000000000008118 168.0
PJD1_k127_3715446_0 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007004 456.0
PJD1_k127_3715446_1 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 351.0
PJD1_k127_3715446_2 MacB-like periplasmic core domain K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007292 265.0
PJD1_k127_3715446_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000002233 235.0
PJD1_k127_3754289_0 protein histidine kinase activity K02484,K07640,K07643,K07645,K07649,K19609 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 555.0
PJD1_k127_3754289_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 359.0
PJD1_k127_379714_0 DNA-directed DNA polymerase activity K02347,K04477 - - 4.478e-259 809.0
PJD1_k127_379714_1 signal-transduction protein containing cAMP-binding and CBS domains K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 317.0
PJD1_k127_379714_2 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000004752 248.0
PJD1_k127_379714_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009824 244.0
PJD1_k127_379714_4 COGs COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.0000000000000000000000000505 118.0
PJD1_k127_379714_6 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.0000001146 59.0
PJD1_k127_3820200_0 PhoQ Sensor - - - 1.834e-233 754.0
PJD1_k127_3820200_1 long-chain fatty acid transporting porin activity K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 591.0
PJD1_k127_3820200_10 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00363,K05710 - 1.7.1.15 0.0000000000000000000000000000000000000006128 151.0
PJD1_k127_3820200_2 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 409.0
PJD1_k127_3820200_3 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 407.0
PJD1_k127_3820200_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006229 391.0
PJD1_k127_3820200_5 HNH nucleases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006444 347.0
PJD1_k127_3820200_6 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 344.0
PJD1_k127_3820200_7 precorrin-2 dehydrogenase activity K02302,K02304 GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.76,2.1.1.107,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 308.0
PJD1_k127_3820200_8 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008665 295.0
PJD1_k127_3820200_9 Thiamine-binding protein - - - 0.00000000000000000000000000000000000000000000002017 171.0
PJD1_k127_3829638_0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008203 325.0
PJD1_k127_3829638_1 NADH ubiquinone oxidoreductase, 20 Kd subunit K18007 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000001276 268.0
PJD1_k127_3829638_2 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008598 244.0
PJD1_k127_3875108_0 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 501.0
PJD1_k127_3875108_1 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006578 475.0
PJD1_k127_3875108_2 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008828 302.0
PJD1_k127_3875108_3 SprT-like family K02742 - - 0.00000000000000000000000000000000000002223 148.0
PJD1_k127_3953065_2 oxidoreductase activity - - - 0.000000000000000000000000000000000000002813 150.0
PJD1_k127_3953065_3 peroxidase activity - - - 0.000000000000000000000000000000008453 126.0
PJD1_k127_3980074_0 Nitrite and sulphite reductase 4Fe-4S domain K00362,K00392 - 1.7.1.15,1.8.7.1 0.0 1240.0
PJD1_k127_3980074_1 2 iron, 2 sulfur cluster binding K04487,K13643 - 2.8.1.7 0.0000000000000000000001744 99.0
PJD1_k127_3984269_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 6.17e-217 717.0
PJD1_k127_3984269_1 PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000619 250.0
PJD1_k127_3984269_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000001245 127.0
PJD1_k127_3985072_0 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 446.0
PJD1_k127_3985072_1 Pirin K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007094 417.0
PJD1_k127_3985072_2 nitrite reductase [NAD(P)H] activity K00158,K00363,K03809,K05710 - 1.2.3.3,1.6.5.2,1.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006942 273.0
PJD1_k127_3985072_3 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000002459 263.0
PJD1_k127_3985072_4 protein disulfide oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000006146 242.0
PJD1_k127_3985072_7 SnoaL-like domain - - - 0.0000000000000000000001227 101.0
PJD1_k127_3988851_0 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006822 531.0
PJD1_k127_3988851_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 496.0
PJD1_k127_3988851_2 2 iron, 2 sulfur cluster binding K13643 - - 0.000000000000000000001058 95.0
PJD1_k127_4001249_0 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000665 477.0
PJD1_k127_4001249_2 phosphorelay signal transduction system K02535 - 3.5.1.108 0.00000000000000000000000000000000001578 136.0
PJD1_k127_4001249_3 - - - - 0.00000000000000000000000000001539 123.0
PJD1_k127_4018234_0 alcohol dehydrogenase K00060,K07777 - 1.1.1.103,2.7.13.3 4.608e-194 610.0
PJD1_k127_4018234_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 535.0
PJD1_k127_4047678_0 Transglutaminase/protease-like homologues - - - 2.568e-194 629.0
PJD1_k127_4047678_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 498.0
PJD1_k127_4047678_3 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 342.0
PJD1_k127_4047678_4 protein (some members contain a von Willebrand factor type A (vWA) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004577 329.0
PJD1_k127_4047678_5 zinc ion binding - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000001861 212.0
PJD1_k127_4047678_6 Represses a number of genes involved in the response to DNA damage (SOS response) K01356 - 3.4.21.88 0.0002224 46.0
PJD1_k127_4061175_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.521e-263 817.0
PJD1_k127_4061175_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 7.967e-253 785.0
PJD1_k127_4061175_10 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000000000000000001061 213.0
PJD1_k127_4061175_11 Bacterial protein of unknown function (DUF948) - - - 0.00000000000000000000000000000000000000000000000001353 183.0
PJD1_k127_4061175_12 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000004866 162.0
PJD1_k127_4061175_14 cell cycle K05589 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0030428,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044464,GO:0051301,GO:0071944 - 0.0000000000000000000000000006391 116.0
PJD1_k127_4061175_15 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000152 106.0
PJD1_k127_4061175_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.101e-240 747.0
PJD1_k127_4061175_3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 4.72e-222 705.0
PJD1_k127_4061175_4 Acts as a magnesium transporter K06213 - - 2.951e-217 683.0
PJD1_k127_4061175_5 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007016 566.0
PJD1_k127_4061175_6 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 446.0
PJD1_k127_4061175_7 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 369.0
PJD1_k127_4061175_8 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005967 341.0
PJD1_k127_4061175_9 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 312.0
PJD1_k127_4066455_0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) K01494 - 3.5.4.13 2.904e-203 637.0
PJD1_k127_4066455_1 Lysine-2,3-aminomutase K01843 - 5.4.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004964 491.0
PJD1_k127_4066455_2 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 409.0
PJD1_k127_4066455_3 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 309.0
PJD1_k127_4066455_4 transferase activity, transferring glycosyl groups K20742 - 3.4.14.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000226 268.0
PJD1_k127_4082307_0 thiamine transport K02011 - - 2.508e-235 738.0
PJD1_k127_4082307_1 ATPase activity K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 526.0
PJD1_k127_4082307_2 iron ion homeostasis K02012 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 509.0
PJD1_k127_4082307_3 protein flavinylation K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 339.0
PJD1_k127_4082307_5 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000102 265.0
PJD1_k127_4082307_6 bacteriocin transport K03561,K03562 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0017038,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000002442 218.0
PJD1_k127_4082307_7 biopolymer transport protein K03559 - - 0.00000000000000000001301 96.0
PJD1_k127_4082307_8 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K03832 - - 0.0000000000000000001567 100.0
PJD1_k127_4083058_0 Oxidoreductase FAD-binding domain - - - 3.405e-210 659.0
PJD1_k127_4083058_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 324.0
PJD1_k127_4083058_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 320.0
PJD1_k127_4083058_3 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005243 315.0
PJD1_k127_4083058_4 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000001364 252.0
PJD1_k127_4083058_5 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000001401 203.0
PJD1_k127_4101947_0 Evidence 4 Homologs of previously reported genes of K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 574.0
PJD1_k127_4101947_1 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 424.0
PJD1_k127_4101947_2 PFAM NapC NirT cytochrome c K02569 - - 0.0000000000000000000000000000000000000000001052 162.0
PJD1_k127_410753_0 Cytochrome c K12263 - - 1.795e-240 757.0
PJD1_k127_410753_1 polyphosphate kinase activity K22468 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 557.0
PJD1_k127_410753_10 overlaps another CDS with the same product name K07112 - - 0.000000000000000000000000000000000000002411 153.0
PJD1_k127_410753_12 DsrE/DsrF-like family K09004 - - 0.000000000000000001063 91.0
PJD1_k127_410753_13 Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE K06039,K07235 - - 0.00002173 48.0
PJD1_k127_410753_2 Cytochrome C oxidase, cbb3-type, subunit III K19713 - 1.8.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009648 265.0
PJD1_k127_410753_3 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002878 251.0
PJD1_k127_410753_4 Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE K06039,K07235 - - 0.00000000000000000000000000000000000000000000000000000000000000006986 223.0
PJD1_k127_410753_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000004609 219.0
PJD1_k127_410753_6 OsmC-like protein K09136 - - 0.00000000000000000000000000000000000000000000000000000000000059 213.0
PJD1_k127_410753_8 IMP dehydrogenase activity K09137 - - 0.00000000000000000000000000000000000000000001572 167.0
PJD1_k127_410753_9 - K07112 - - 0.0000000000000000000000000000000000000001461 164.0
PJD1_k127_4115513_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 1.08e-219 693.0
PJD1_k127_4115513_1 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000009017 243.0
PJD1_k127_4115513_2 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000004998 231.0
PJD1_k127_4115513_3 Belongs to the UPF0337 (CsbD) family - - - 0.00000000000000009318 83.0
PJD1_k127_4115513_4 BON domain K04065 - - 0.0000005486 57.0
PJD1_k127_4133113_0 B-1 B cell differentiation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 567.0
PJD1_k127_4133113_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 543.0
PJD1_k127_4133113_2 - - - - 0.00000000000000000000000000006571 117.0
PJD1_k127_4137270_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1.191e-304 944.0
PJD1_k127_4137270_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 5.283e-303 936.0
PJD1_k127_4137270_10 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000000000000000000001352 234.0
PJD1_k127_4137270_11 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000004854 169.0
PJD1_k127_4137270_12 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000009642 157.0
PJD1_k127_4137270_13 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000006962 143.0
PJD1_k127_4137270_14 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000002179 143.0
PJD1_k127_4137270_15 ribonuclease P activity K03536,K08998 GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031123,GO:0031404,GO:0031974,GO:0031981,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904 3.1.26.5 0.0000000000000000000000000000001964 126.0
PJD1_k127_4137270_16 Belongs to the bacterial ribosomal protein bL34 family K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000002007 63.0
PJD1_k127_4137270_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 5.448e-249 771.0
PJD1_k127_4137270_3 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 1.133e-208 663.0
PJD1_k127_4137270_4 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 612.0
PJD1_k127_4137270_5 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008122 531.0
PJD1_k127_4137270_6 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005203 521.0
PJD1_k127_4137270_7 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008112 487.0
PJD1_k127_4137270_8 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 367.0
PJD1_k127_4137270_9 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 290.0
PJD1_k127_4140198_0 Cytochrome b/b6/petB K00412 - - 5.119e-208 649.0
PJD1_k127_4140198_1 oxidoreductase activity, acting on diphenols and related substances as donors K00240,K03886 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 475.0
PJD1_k127_4140198_2 aerobic electron transport chain K00425,K08738 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 335.0
PJD1_k127_4140198_3 Cytochrome c K17052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 329.0
PJD1_k127_4144485_0 peptidyl-tyrosine sulfation - - - 6.133e-211 706.0
PJD1_k127_4144485_1 transposition, DNA-mediated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 526.0
PJD1_k127_4144485_2 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 383.0
PJD1_k127_4144485_3 Belongs to the MIP aquaporin (TC 1.A.8) family K02440,K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 304.0
PJD1_k127_4144485_4 amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007307 308.0
PJD1_k127_4144485_5 protein transport across the cell outer membrane K02453,K03219 - - 0.000000000000000000000000000000000000000000000000000000000000000000004792 256.0
PJD1_k127_4144485_6 23S rRNA-intervening sequence protein - - - 0.0000002742 54.0
PJD1_k127_4159530_0 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000000436 178.0
PJD1_k127_4159530_1 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000000000001653 150.0
PJD1_k127_4159530_2 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0000000000000000004999 92.0
PJD1_k127_4168636_0 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.0 2347.0
PJD1_k127_4168636_1 Radical SAM superfamily K04069 - 1.97.1.4 1.851e-199 625.0
PJD1_k127_4168636_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000003541 137.0
PJD1_k127_4168636_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000008149 108.0
PJD1_k127_4169149_0 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 375.0
PJD1_k127_4169149_1 HI0933-like protein K07007 - - 0.000000000000000000001587 96.0
PJD1_k127_4169149_2 - - - - 0.0006341 44.0
PJD1_k127_4180380_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005442 438.0
PJD1_k127_4180380_1 transposase activity K07483,K07497 - - 0.0000000000000000000000000000000000000000459 153.0
PJD1_k127_4189768_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 427.0
PJD1_k127_4189768_1 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000000000000000000000005261 118.0
PJD1_k127_4189768_2 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000000000000008865 102.0
PJD1_k127_4189768_3 - - - - 0.00000000000000000000006415 107.0
PJD1_k127_4189768_4 PFAM hydrogenase expression formation protein (HUPF HYPC) K04653 - - 0.0000000000000000000005576 97.0
PJD1_k127_4189768_5 Protein of unknown function (DUF2283) - - - 0.00000000000000000001975 92.0
PJD1_k127_4189768_6 Hydrogenase formation hypA family K04654 - - 0.000000000000007081 75.0
PJD1_k127_4189768_8 - - - - 0.000126 52.0
PJD1_k127_420106_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008053 436.0
PJD1_k127_420106_1 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008062 347.0
PJD1_k127_420106_2 Glycosyl transferase, family 2 - GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 291.0
PJD1_k127_420106_3 biosynthesis glycosyltransferase K12984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002056 273.0
PJD1_k127_420106_4 Glycosyl transferase, family 2 K20444 - - 0.00000000000000000000000000000000000000000000000000000000005512 217.0
PJD1_k127_420106_5 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000005923 177.0
PJD1_k127_420106_6 biosynthesis glycosyltransferase - - - 0.000000000000000001822 85.0
PJD1_k127_420106_7 Winged helix-turn-helix DNA-binding - - - 0.000000002535 59.0
PJD1_k127_4228639_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1558.0
PJD1_k127_4228639_1 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006179 319.0
PJD1_k127_4228639_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004731 243.0
PJD1_k127_4228639_3 Sel1 domain protein repeat-containing protein K07126 - - 0.00000000000000000000000000000000000000001456 169.0
PJD1_k127_4228639_4 resolution of meiotic recombination intermediates K05516 - - 0.0000000001414 73.0
PJD1_k127_4314313_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 595.0
PJD1_k127_4314313_1 mannose-ethanolamine phosphotransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 462.0
PJD1_k127_4314313_4 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000811 166.0
PJD1_k127_4314313_5 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.00000000000000000000000000000000000000000001339 172.0
PJD1_k127_4345328_0 - - - - 0.00000000000000000000000000000000000000000000000001364 187.0
PJD1_k127_4345328_1 - - - - 0.0000000000000000009686 93.0
PJD1_k127_4345328_2 - - - - 0.0000000000003729 76.0
PJD1_k127_4364186_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1347.0
PJD1_k127_4364186_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 1.504e-268 830.0
PJD1_k127_4364186_2 Nucleotidyl transferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007096 433.0
PJD1_k127_4364186_3 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 353.0
PJD1_k127_4364186_4 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000000000000000000000000000000000000000000000004212 220.0
PJD1_k127_4370998_0 transmembrane transport K02532,K05820,K08167,K08218,K08369 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003746 469.0
PJD1_k127_4370998_1 Peptidase family M48 K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 425.0
PJD1_k127_4370998_2 Belongs to the glutathione peroxidase family K00432,K20207 - 1.11.1.22,1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 291.0
PJD1_k127_4370998_5 Transposase and inactivated derivatives - - - 0.00000000000000001655 86.0
PJD1_k127_4370998_6 - K14588 - - 0.0000001449 55.0
PJD1_k127_4397274_0 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 339.0
PJD1_k127_4397274_1 - K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002096 276.0
PJD1_k127_4397274_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00371,K16965,K17048,K17051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.5.1 0.00000000000000000000000000000000000000000000001536 174.0
PJD1_k127_4397274_3 signal transduction histidine kinase - - - 0.00000000000000000000000000003855 135.0
PJD1_k127_4397274_4 amino acid transport - - - 0.0000002499 53.0
PJD1_k127_4397274_5 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.000001554 61.0
PJD1_k127_4397274_6 molybdopterin cofactor binding K00370,K10700,K16964,K17050 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.17.99.2,1.7.5.1,1.8.2.4 0.0001475 44.0
PJD1_k127_4441965_0 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 388.0
PJD1_k127_4441965_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008841 279.0
PJD1_k127_4441965_2 YacP-like NYN domain K06962 - - 0.00000000000000000000001502 102.0
PJD1_k127_450234_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1680.0
PJD1_k127_450234_1 Sodium Bile acid symporter family K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 537.0
PJD1_k127_450234_2 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 420.0
PJD1_k127_450234_3 Hypothetical methyltransferase K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 376.0
PJD1_k127_450234_4 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000001288 244.0
PJD1_k127_450234_5 helix_turn_helix, Arsenical Resistance Operon Repressor K03892,K21903 - - 0.00000000000000000000000000000001312 129.0
PJD1_k127_450234_6 PFAM Arsenical resistance operon trans-acting repressor ArsD - - - 0.0000000184 59.0
PJD1_k127_4532128_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1183.0
PJD1_k127_4532128_1 positive regulation of growth - - - 0.000000000001191 70.0
PJD1_k127_4532128_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000003629 57.0
PJD1_k127_4532128_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.0007563 48.0
PJD1_k127_456202_0 - - - - 4.305e-208 648.0
PJD1_k127_456202_1 chaperone-mediated protein complex assembly K00373,K17052 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016530,GO:0022607,GO:0034622,GO:0042126,GO:0042128,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0051131,GO:0065003,GO:0071704,GO:0071840,GO:0071941,GO:0140104,GO:2001057 - 7.249e-196 612.0
PJD1_k127_456202_2 anaphase-promoting complex binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 602.0
PJD1_k127_456202_3 protein complex oligomerization - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004138 529.0
PJD1_k127_456202_4 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 297.0
PJD1_k127_456202_5 4 iron, 4 sulfur cluster binding K02573 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 289.0
PJD1_k127_456202_7 Product type h extrachromosomal origin - - - 0.000000000000000007118 87.0
PJD1_k127_456202_8 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system K19166 - - 0.00000000000005562 72.0
PJD1_k127_4597720_0 protoporphyrinogen oxidase activity K01854 - 5.4.99.9 3.628e-217 680.0
PJD1_k127_4597720_1 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008563 578.0
PJD1_k127_4597720_2 phospho-N-acetylmuramoyl-pentapeptide-transferase activity K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 459.0
PJD1_k127_4597720_3 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 444.0
PJD1_k127_4597720_4 transferase activity, transferring glycosyl groups K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 387.0
PJD1_k127_4597720_5 Dehydratase family K01687 - 4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 334.0
PJD1_k127_4597720_6 Asparagine synthase K01953 GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 6.3.5.4 0.0000000000000000000000000000000003206 141.0
PJD1_k127_4612727_0 efflux transmembrane transporter activity K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 594.0
PJD1_k127_4612727_1 tRNA 3'-trailer cleavage K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 533.0
PJD1_k127_4612727_3 - - - - 0.0000000000000000000000000000000000000000000001786 169.0
PJD1_k127_4612727_4 Belongs to the UPF0145 family - - - 0.0000000000000000000000000000000000000005495 150.0
PJD1_k127_4612727_5 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000005975 53.0
PJD1_k127_4729595_0 Histidine kinase - - - 1.841e-236 738.0
PJD1_k127_4729595_1 two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 366.0
PJD1_k127_4762201_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 281.0
PJD1_k127_4762201_1 Response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002225 261.0
PJD1_k127_4764315_0 DNA ligase K01971 - 6.5.1.1 5.63e-322 1002.0
PJD1_k127_4764315_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 9.506e-243 755.0
PJD1_k127_4764315_2 Response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000245 194.0
PJD1_k127_4764315_3 - - - - 0.000000000000000000000000000000000000000000003917 166.0
PJD1_k127_4764315_4 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000001499 95.0
PJD1_k127_4764315_5 Alpha beta hydrolase K00433 - 1.11.1.10 0.0000000000000004903 80.0
PJD1_k127_4765567_0 Binding-protein-dependent transport system inner membrane component K02037,K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 607.0
PJD1_k127_4765567_1 phosphate ABC transporter K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 584.0
PJD1_k127_4765567_2 PFAM integrase K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 433.0
PJD1_k127_4765567_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 385.0
PJD1_k127_4765567_4 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 295.0
PJD1_k127_4765567_5 Phosphate-starvation-inducible E - - - 0.00000000000000000000000000000000000000009883 156.0
PJD1_k127_4765567_6 Transposase - - - 0.000000000000000000000000000000002014 130.0
PJD1_k127_4769049_0 Alpha amylase, catalytic domain K06044 - 5.4.99.15 4.863e-319 1004.0
PJD1_k127_4769049_1 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 1.082e-271 845.0
PJD1_k127_4769049_10 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000003936 111.0
PJD1_k127_4769049_11 Domain of unknown function (DUF3416) K16147 - 2.4.99.16 0.000000000000000000002393 95.0
PJD1_k127_4769049_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700,K01236 - 2.4.1.18,3.2.1.141 2.831e-208 665.0
PJD1_k127_4769049_3 protein conserved in bacteria K09859 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 583.0
PJD1_k127_4769049_4 PFAM Glycosyl transferases group 1 K13057 - 2.4.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 452.0
PJD1_k127_4769049_5 LPP20 lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 434.0
PJD1_k127_4769049_6 Glycosyl transferase family 2 K21349 - 2.4.1.268 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007385 427.0
PJD1_k127_4769049_7 Peptidoglycan-synthase activator LpoB K07337 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 301.0
PJD1_k127_4769049_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000261 246.0
PJD1_k127_4769049_9 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.000000000000000000000000000000000000000000000000000000000000000000553 230.0
PJD1_k127_4772361_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.701e-242 756.0
PJD1_k127_4772361_1 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 1.338e-232 728.0
PJD1_k127_4772361_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 348.0
PJD1_k127_4772361_11 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 342.0
PJD1_k127_4772361_12 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 325.0
PJD1_k127_4772361_13 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 301.0
PJD1_k127_4772361_14 Ribosomal protein L4/L1 family K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 294.0
PJD1_k127_4772361_15 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 288.0
PJD1_k127_4772361_16 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003201 272.0
PJD1_k127_4772361_17 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002959 258.0
PJD1_k127_4772361_18 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001645 254.0
PJD1_k127_4772361_19 Fimbrial assembly protein (PilN) K02663 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001417 253.0
PJD1_k127_4772361_2 Secretin and TonB N terminus short domain K02666 - - 1.295e-227 723.0
PJD1_k127_4772361_20 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000000000000001253 237.0
PJD1_k127_4772361_21 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000006419 229.0
PJD1_k127_4772361_22 Protein conserved in bacteria K11719 - - 0.000000000000000000000000000000000000000000000000000000000000000005278 231.0
PJD1_k127_4772361_23 Pilus assembly protein, PilP K02665 - - 0.0000000000000000000000000000000000000000000000000000000001584 209.0
PJD1_k127_4772361_24 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000005045 201.0
PJD1_k127_4772361_25 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000005584 201.0
PJD1_k127_4772361_26 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000001517 201.0
PJD1_k127_4772361_27 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000000000005904 187.0
PJD1_k127_4772361_28 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000001704 188.0
PJD1_k127_4772361_29 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000000000000003322 184.0
PJD1_k127_4772361_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007316 557.0
PJD1_k127_4772361_30 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000000000000000006399 179.0
PJD1_k127_4772361_31 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000000000000000002882 170.0
PJD1_k127_4772361_32 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000004515 162.0
PJD1_k127_4772361_33 OstA-like protein K09774 - - 0.0000000000000000000000000000000000000000003655 164.0
PJD1_k127_4772361_34 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000000000000005605 157.0
PJD1_k127_4772361_35 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.00000000000000000000000000000000000005115 149.0
PJD1_k127_4772361_36 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000000000886 139.0
PJD1_k127_4772361_37 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000006937 130.0
PJD1_k127_4772361_38 30S ribosomal protein S14 K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000006273 116.0
PJD1_k127_4772361_39 Transposase domain (DUF772) - - - 0.00000000000000000000001356 106.0
PJD1_k127_4772361_4 Type IV pilus assembly protein PilM; K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 509.0
PJD1_k127_4772361_40 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000003257 85.0
PJD1_k127_4772361_41 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000002882 81.0
PJD1_k127_4772361_42 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000001464 76.0
PJD1_k127_4772361_43 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000006282 71.0
PJD1_k127_4772361_44 Transposase - - - 0.0000000588 56.0
PJD1_k127_4772361_45 Winged helix-turn helix K18996 - - 0.0000001445 61.0
PJD1_k127_4772361_5 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 468.0
PJD1_k127_4772361_6 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 466.0
PJD1_k127_4772361_7 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 394.0
PJD1_k127_4772361_8 Metallopeptidase family M24 K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006351 390.0
PJD1_k127_4772361_9 ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006236 388.0
PJD1_k127_4775177_0 B12 binding domain - - - 2.481e-320 984.0
PJD1_k127_4775177_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003812 544.0
PJD1_k127_4775177_2 heme binding K00463 - 1.13.11.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 466.0
PJD1_k127_4803849_0 MacB-like periplasmic core domain K02004 - - 7.474e-255 812.0
PJD1_k127_4803849_1 FAD dependent oxidoreductase K06954 - - 1.018e-206 649.0
PJD1_k127_4803849_10 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 346.0
PJD1_k127_4803849_11 Protein of unknown function (DUF1365) K09701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006947 344.0
PJD1_k127_4803849_12 lipoprotein transporter activity K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000596 293.0
PJD1_k127_4803849_13 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000566 281.0
PJD1_k127_4803849_14 Outer Membrane Lipoprotein K03098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002577 251.0
PJD1_k127_4803849_15 MraZ protein, putative antitoxin-like K03925 - - 0.00000000000000000000000000000000000000000000000000000000000000000006358 233.0
PJD1_k127_4803849_16 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000001846 206.0
PJD1_k127_4803849_17 Protein of unknown function (DUF2878) - - - 0.0000000000000000000000000000000000000000000000000303 184.0
PJD1_k127_4803849_18 crossover junction endodeoxyribonuclease activity K01160 - 3.1.22.4 0.00000000000000000000000000000000000000000000001103 177.0
PJD1_k127_4803849_19 Regulatory protein, FmdB family - - - 0.0000000000000000000000000000000001499 135.0
PJD1_k127_4803849_2 MacB-like periplasmic core domain K02004 - - 1.166e-206 648.0
PJD1_k127_4803849_20 PFAM regulatory protein, MerR K22491 - - 0.0000000000000000000001305 101.0
PJD1_k127_4803849_21 photosystem II stabilization K02237 - - 0.000000000000000000007266 93.0
PJD1_k127_4803849_22 response regulator - - - 0.00000000000000000003934 94.0
PJD1_k127_4803849_23 Excisionase - - - 0.0000000001062 64.0
PJD1_k127_4803849_3 Cyclopropane-fatty-acyl-phospholipid synthase K00574 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008168,GO:0008610,GO:0008757,GO:0009058,GO:0009059,GO:0009273,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0030312,GO:0032259,GO:0032787,GO:0034645,GO:0042546,GO:0043170,GO:0043436,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070589,GO:0071554,GO:0071704,GO:0071766,GO:0071767,GO:0071768,GO:0071840,GO:0071944,GO:0072330,GO:1901576 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006062 602.0
PJD1_k127_4803849_4 Catalyzes the conversion of dihydroorotate to orotate K00226,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 520.0
PJD1_k127_4803849_5 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 496.0
PJD1_k127_4803849_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 492.0
PJD1_k127_4803849_7 Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 450.0
PJD1_k127_4803849_8 Evidence 2b Function of strongly homologous gene K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 363.0
PJD1_k127_4803849_9 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 361.0
PJD1_k127_4805352_0 Glutamine synthetase, beta-Grasp domain K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 611.0
PJD1_k127_4805352_1 transmembrane transporter activity K03535 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007138 541.0
PJD1_k127_4805352_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002038 276.0
PJD1_k127_4805352_3 PIN domain - - - 0.000000000000000000000000000001198 127.0
PJD1_k127_4805352_4 - - - - 0.0000000000004387 71.0
PJD1_k127_4805352_5 - - - - 0.000000007226 61.0
PJD1_k127_4807055_0 Lumazine binding domain K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 322.0
PJD1_k127_4807055_1 pseudouridine synthase activity K06178,K06181 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.20,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006945 319.0
PJD1_k127_4807055_2 MFS_1 like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002219 268.0
PJD1_k127_480716_0 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004443 287.0
PJD1_k127_480716_1 Nitrite reductase K00368,K08100 - 1.3.3.5,1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001175 271.0
PJD1_k127_480716_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000392 233.0
PJD1_k127_480716_3 Cytochrome c - - - 0.00000000000000000000000000000000000000000000005665 174.0
PJD1_k127_480716_4 transposase activity - - - 0.0000000000000000000000000000009768 128.0
PJD1_k127_480716_6 PFAM Integrase core domain - - - 0.00000000000000000000002474 104.0
PJD1_k127_480716_7 - - - - 0.00000002218 63.0
PJD1_k127_4807952_0 - - - - 0.00000000000000000000000000000000000000000000000000000000002488 218.0
PJD1_k127_4807952_1 Na H antiporter - - - 0.000000000000000000000000000000000001629 143.0
PJD1_k127_4807952_2 trehalose biosynthetic process K00697,K01087,K16055 GO:0000287,GO:0003674,GO:0003824,GO:0004805,GO:0005488,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009266,GO:0009311,GO:0009312,GO:0009409,GO:0009628,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0033554,GO:0034637,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0046351,GO:0046872,GO:0050896,GO:0051716,GO:0070413,GO:0070415,GO:0070417,GO:0071704,GO:1901576 2.4.1.15,2.4.1.347,3.1.3.12 0.00001304 49.0
PJD1_k127_4820722_0 Sigma-54 interaction domain K07714 - - 9.669e-245 761.0
PJD1_k127_4820722_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 541.0
PJD1_k127_4820722_10 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006331 337.0
PJD1_k127_4820722_11 Phosphoserine phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 297.0
PJD1_k127_4820722_13 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001587 271.0
PJD1_k127_4820722_14 signal-transduction protein containing cAMP-binding and CBS domains K00031,K14446 - 1.1.1.42,1.3.1.85 0.000000000000000000000000000000000000000000000000000000000000000000005651 244.0
PJD1_k127_4820722_15 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000001176 233.0
PJD1_k127_4820722_16 maF-like protein K03215,K06287 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030145,GO:0030312,GO:0036218,GO:0036221,GO:0042802,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0047429,GO:0071944 2.1.1.190 0.000000000000000000000000000000000000000000000000000000004011 205.0
PJD1_k127_4820722_17 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000001815 189.0
PJD1_k127_4820722_18 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000006477 169.0
PJD1_k127_4820722_19 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000002625 127.0
PJD1_k127_4820722_2 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008508 526.0
PJD1_k127_4820722_20 GAF domain - - - 0.000000000000000000001645 111.0
PJD1_k127_4820722_3 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 492.0
PJD1_k127_4820722_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05541 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004782 484.0
PJD1_k127_4820722_5 Protein of unknown function (DUF692) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 481.0
PJD1_k127_4820722_6 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005657 467.0
PJD1_k127_4820722_7 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007047 472.0
PJD1_k127_4820722_8 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 430.0
PJD1_k127_4820722_9 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006401 356.0
PJD1_k127_4825621_0 - - - - 0.00000000000000000000000000000000000000000000001227 182.0
PJD1_k127_4825621_1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000003137 138.0
PJD1_k127_4829371_0 ATP-dependent helicase K03579 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 449.0
PJD1_k127_4829371_3 Protein of unknown function (DUF1016) - - - 0.000000000000001976 85.0
PJD1_k127_4829371_4 contains PIN domain - - - 0.0000004448 58.0
PJD1_k127_4829371_5 nuclease activity - - - 0.0000006183 58.0
PJD1_k127_4829371_6 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0003852 45.0
PJD1_k127_4832230_0 Pup-ligase protein K20814 - 3.5.1.119 1.834e-273 847.0
PJD1_k127_4832230_1 Proteasomal ATPase OB/ID domain K13527 - - 2.582e-270 842.0
PJD1_k127_4832230_10 May function as a protein modifier covalently attached to lysine residues of substrate proteins. This may serve to target the modified proteins for degradation by proteasomes - - - 0.000000000000000000000006148 103.0
PJD1_k127_4832230_11 HNH nucleases - - - 0.0000000000000000003143 93.0
PJD1_k127_4832230_12 - - - - 0.0001926 51.0
PJD1_k127_4832230_2 Pup-ligase protein K13571 - 6.3.1.19 9.62e-243 760.0
PJD1_k127_4832230_3 poly(3-hydroxybutyrate) depolymerase activity K07019 GO:0003674,GO:0003824,GO:0006629,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0044237,GO:0044238,GO:0044255,GO:0071704 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 446.0
PJD1_k127_4832230_4 Proteasome subunit K03433 - 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009166 431.0
PJD1_k127_4832230_5 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K08070 - 1.3.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 352.0
PJD1_k127_4832230_6 Proteasome subunit K03432 - 3.4.25.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 349.0
PJD1_k127_4832230_7 Oxidoreductase - - - 0.000000000000000000000000000000000000000000000005972 173.0
PJD1_k127_4832230_9 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.00000000000000000000000001069 109.0
PJD1_k127_4851069_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 420.0
PJD1_k127_4851069_1 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 310.0
PJD1_k127_4851069_2 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004562 272.0
PJD1_k127_4851069_3 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000000000000000000000000000000000000000000000000003088 224.0
PJD1_k127_4851069_4 cell redox homeostasis K03671,K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000001348 199.0
PJD1_k127_4851069_5 Cytochrome c - - - 0.0000000000000000000000000000000000000000001453 162.0
PJD1_k127_4851069_6 AhpC/TSA family - - - 0.00000000000005641 71.0
PJD1_k127_4876856_0 Aminotransferase class I and II K10206 - 2.6.1.83 4.726e-240 744.0
PJD1_k127_4876856_1 methyltransferase K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008253 316.0
PJD1_k127_4876856_5 glutamine amidotransferase K01951 - 6.3.5.2 0.00000000000000000000000000000000000000003419 161.0
PJD1_k127_4888318_0 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 7.974e-247 764.0
PJD1_k127_4888318_1 Pyridoxal-phosphate dependent enzyme K01738,K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 547.0
PJD1_k127_4888318_10 NIL - - - 0.00000000000000000000000000000000004844 135.0
PJD1_k127_4888318_11 phospholipase C K21302 - 3.1.3.64 0.000000000000000000000000000001004 122.0
PJD1_k127_4888318_12 thiamine diphosphate biosynthetic process K03154 - - 0.00000000000000000000001128 101.0
PJD1_k127_4888318_14 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.0000009008 53.0
PJD1_k127_4888318_2 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 541.0
PJD1_k127_4888318_3 ThiF family K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006351 473.0
PJD1_k127_4888318_4 ThiF family K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000878 429.0
PJD1_k127_4888318_5 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 309.0
PJD1_k127_4888318_6 nucleotidyltransferase activity K00984,K19279 - 2.7.7.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000009559 265.0
PJD1_k127_4888318_7 PLD-like domain - - - 0.000000000000000000000000000000000000000000000000000000000001975 217.0
PJD1_k127_4888318_9 ThiS family K03636 - - 0.00000000000000000000000000000000000000004032 153.0
PJD1_k127_4891302_0 4-alpha-glucanotransferase K00705 - 2.4.1.25 3.745e-247 780.0
PJD1_k127_4896394_0 Domain of unknown function (DUF5069) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001306 256.0
PJD1_k127_4896394_1 addiction module antidote protein HigA K21498 - - 0.00000000000000000000000000000000000000000000000143 174.0
PJD1_k127_4896394_2 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000000000000000000002375 111.0
PJD1_k127_4896394_3 copG family - - - 0.00000000000000000000000003212 109.0
PJD1_k127_4896394_4 - - - - 0.00000000000003135 73.0
PJD1_k127_4898481_0 saccharopine dehydrogenase activity K00290 - 1.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005627 571.0
PJD1_k127_4898481_1 belongs to the aldehyde dehydrogenase family K00128 GO:0003674,GO:0003824,GO:0004029,GO:0006081,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0044237,GO:0055114,GO:0071704 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 429.0
PJD1_k127_4898481_2 Ubiquinol--cytochrome c reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001388 238.0
PJD1_k127_4898481_3 Zn peptidase - - - 0.0000000000000000000000000000000000001303 143.0
PJD1_k127_4906499_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1238.0
PJD1_k127_4906499_1 Actin K03569 - - 1.268e-204 639.0
PJD1_k127_4906499_2 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 3.854e-194 611.0
PJD1_k127_4906499_3 ribonuclease Rne Rng family K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007448 540.0
PJD1_k127_4906499_4 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 482.0
PJD1_k127_4906499_5 DNA recombination-mediator protein A K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 402.0
PJD1_k127_4906499_6 shape-determining protein MreC K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 344.0
PJD1_k127_4906499_7 SurA N-terminal domain K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 317.0
PJD1_k127_4906499_8 RDD family - - - 0.00000000000000000000000000000000000000000000000000003084 191.0
PJD1_k127_4906499_9 PFAM transposase, IS4 family protein - - - 0.00000000000000000000000000000000000001564 146.0
PJD1_k127_4927419_0 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 381.0
PJD1_k127_4927419_1 - - - - 0.0000000000000004306 89.0
PJD1_k127_4927419_2 transmembrane transport - - - 0.0000000003413 61.0
PJD1_k127_4931391_0 5TM C-terminal transporter carbon starvation CstA K06200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 569.0
PJD1_k127_4931391_1 Protein of unknown function (DUF520) K09767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006188 269.0
PJD1_k127_4940332_0 deoxyhypusine monooxygenase activity K02632 - 4.4.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000001512 244.0
PJD1_k127_4940332_1 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000003149 189.0
PJD1_k127_5002126_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1236.0
PJD1_k127_5002126_1 DnaJ C terminal domain K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 456.0
PJD1_k127_5002126_2 MerR HTH family regulatory protein K18997 - - 0.000000000000000001135 92.0
PJD1_k127_5005594_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000001639 215.0
PJD1_k127_5005594_4 Protein of unknown function (DUF2934) - - - 0.0001356 48.0
PJD1_k127_5006745_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 1.229e-195 621.0
PJD1_k127_5006745_1 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 550.0
PJD1_k127_5006745_2 FES K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 404.0
PJD1_k127_5006745_3 DNA replication proofreading K02336,K06877,K07501 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 384.0
PJD1_k127_5006745_4 nUDIX hydrolase K03574,K03575 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000004738 208.0
PJD1_k127_5006745_6 nuclease activity K06218 - - 0.0000000000000000000000000000002703 125.0
PJD1_k127_5014652_0 domain protein K02004,K06994 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008333 301.0
PJD1_k127_5014652_1 chlorophyll binding K02487,K12543 - - 0.0000000000000000000000000000000000000000000000000000000000000000004844 235.0
PJD1_k127_5014652_2 heme binding K00463 - 1.13.11.52 0.000000000000000000000000000000000000000000006187 166.0
PJD1_k127_5014652_3 Product type h extrachromosomal origin - - - 0.0002586 47.0
PJD1_k127_5020388_0 Winged helix-turn helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004683 455.0
PJD1_k127_5020388_1 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine K03432 - 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001507 254.0
PJD1_k127_5020388_2 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000000000000000000000001136 129.0
PJD1_k127_5020388_3 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000000000000000000000000006979 124.0
PJD1_k127_5025425_0 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000001143 177.0
PJD1_k127_5025425_1 PFAM General secretion pathway protein K K02460 - - 0.0000000000000000000000000000002585 131.0
PJD1_k127_5025425_2 General secretion pathway protein F K02455,K02653 - - 0.000000000000000000000468 97.0
PJD1_k127_5025425_3 Type II secretion system (T2SS), protein M K02462 - - 0.0000000000000007774 85.0
PJD1_k127_5025425_4 Prokaryotic N-terminal methylation motif - - - 0.000000000001157 74.0
PJD1_k127_5025425_5 Prokaryotic N-terminal methylation motif K02457 - - 0.0000000954 62.0
PJD1_k127_5025425_6 General secretion pathway protein J K02459 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 - 0.00004443 53.0
PJD1_k127_5025425_7 - - - - 0.00004657 55.0
PJD1_k127_5025425_8 Cell division protein - - - 0.0006435 52.0
PJD1_k127_5054654_0 Sterile alpha motif. - - - 0.0 1095.0
PJD1_k127_5062464_0 Belongs to the citrate synthase family K01902,K15230,K15233 - 2.3.3.8,6.2.1.5 0.0 1148.0
PJD1_k127_5062464_1 ATP citrate lyase citrate-binding K15231 - 2.3.3.8 8.893e-238 738.0
PJD1_k127_5062464_2 Ami_2 K01447 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 325.0
PJD1_k127_5062464_3 Helix-turn-helix domain - - - 0.00000000000000009559 82.0
PJD1_k127_5077099_0 Multicopper oxidase K00368,K07233,K22349 - 1.16.3.3,1.7.2.1 0.0 3007.0
PJD1_k127_5077099_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 556.0
PJD1_k127_5077099_2 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003506 503.0
PJD1_k127_5077099_3 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 460.0
PJD1_k127_5077099_4 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 400.0
PJD1_k127_5077099_5 antisigma factor binding K03598 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000822 288.0
PJD1_k127_5077099_7 amino acid - - - 0.000000000000000000000000000000000000000000000000003335 184.0
PJD1_k127_5078544_0 protein secretion by the type I secretion system K11004 - - 0.0 1113.0
PJD1_k127_5078544_1 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 3.029e-283 878.0
PJD1_k127_5078544_10 Telomere recombination K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000006107 199.0
PJD1_k127_5078544_11 chlorophyll binding K02051,K03286 - - 0.00000000000000000000000000000000000000000000000000002051 198.0
PJD1_k127_5078544_12 Conserved hypothetical protein 95 - - - 0.0000000000000000000000000000000000000000000000000002051 190.0
PJD1_k127_5078544_13 Cadherin-like beta sandwich domain - - - 0.0000000000000000000000000000000000000000000000000004034 206.0
PJD1_k127_5078544_14 domain protein K10716 - - 0.0000000000000000000000000000000000000000000000001865 183.0
PJD1_k127_5078544_15 Leucine rich repeats (6 copies) - - - 0.0000000000000000000000000000000000000000000001392 182.0
PJD1_k127_5078544_16 Putative Ig domain - - - 0.0000000000000000000000000000000000000000103 170.0
PJD1_k127_5078544_17 rRNA binding K00185,K02967 - - 0.000000000000000000000000000000000000001804 163.0
PJD1_k127_5078544_18 Putative regulatory protein - - - 0.000000000000000000000000000002458 123.0
PJD1_k127_5078544_19 - - - - 0.00000000000000000000000001599 110.0
PJD1_k127_5078544_2 serine-type endopeptidase activity K04771 - 3.4.21.107 2.485e-216 679.0
PJD1_k127_5078544_21 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000001356 96.0
PJD1_k127_5078544_22 - - - - 0.00000000000002302 76.0
PJD1_k127_5078544_23 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K20276 - - 0.0000000000001306 84.0
PJD1_k127_5078544_24 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K20276 - - 0.00000000000124 80.0
PJD1_k127_5078544_3 Elongation factor G, domain IV K02355 - - 1.084e-204 658.0
PJD1_k127_5078544_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02022,K11003,K12532 - - 1.427e-198 628.0
PJD1_k127_5078544_5 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 6.895e-195 615.0
PJD1_k127_5078544_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 609.0
PJD1_k127_5078544_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004881 443.0
PJD1_k127_5078544_8 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005728 347.0
PJD1_k127_5078544_9 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000003327 265.0
PJD1_k127_5225122_0 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004627 507.0
PJD1_k127_5225122_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 496.0
PJD1_k127_5225122_2 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104,K03741 - 1.20.4.1,3.1.3.48 0.00000000000000000000000000000000000000000000000003874 185.0
PJD1_k127_5250249_0 AcrB/AcrD/AcrF family - - - 0.0 1696.0
PJD1_k127_5250249_1 HlyD family secretion protein K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006654 584.0
PJD1_k127_5250249_10 - - - - 0.000000000000003514 76.0
PJD1_k127_5250249_11 Protein of unknown function (DUF433) - - - 0.00000000000001334 76.0
PJD1_k127_5250249_13 - - - - 0.000008166 53.0
PJD1_k127_5250249_3 Protein of unknown function (DUF2914) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 449.0
PJD1_k127_5250249_4 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 285.0
PJD1_k127_5250249_5 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K00797,K01611 - 2.5.1.16,4.1.1.50 0.000000000000000000000000000000000000000000000000000001148 195.0
PJD1_k127_5250249_6 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000009174 170.0
PJD1_k127_5250249_7 Sterol carrier protein - - - 0.000000000000000000000000000000000001094 141.0
PJD1_k127_5250249_8 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.00000000000000000000269 98.0
PJD1_k127_5256439_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 3.693e-204 653.0
PJD1_k127_5256439_1 General secretion pathway protein F K02455,K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 308.0
PJD1_k127_527305_0 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 407.0
PJD1_k127_527305_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003807 269.0
PJD1_k127_5304233_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 2.975e-249 774.0
PJD1_k127_5304233_1 Evidence 2b Function of strongly homologous gene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 480.0
PJD1_k127_5304233_2 Protein of unknown function (DUF1353) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004521 259.0
PJD1_k127_5308262_0 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 594.0
PJD1_k127_5308262_1 deaminated base DNA N-glycosylase activity K03648 GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 317.0
PJD1_k127_5308262_2 response to abiotic stimulus - - - 0.000000000000000000000000001484 115.0
PJD1_k127_5308262_6 response to nickel cation K07723 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000001183 64.0
PJD1_k127_5453065_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 571.0
PJD1_k127_5453065_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008027 325.0
PJD1_k127_5485553_0 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine K13571 GO:0000166,GO:0000302,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006464,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010035,GO:0010498,GO:0016020,GO:0016740,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0018193,GO:0018205,GO:0019538,GO:0019787,GO:0019941,GO:0030163,GO:0030312,GO:0030554,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034599,GO:0034614,GO:0035639,GO:0035690,GO:0036094,GO:0036211,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044464,GO:0050896,GO:0051409,GO:0051603,GO:0051704,GO:0051716,GO:0070490,GO:0070647,GO:0070887,GO:0071241,GO:0071704,GO:0071731,GO:0071732,GO:0071944,GO:0097159,GO:0097366,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170 6.3.1.19 4.347e-282 869.0
PJD1_k127_5485553_1 Biotin carboxylase C-terminal domain K01959 - 6.4.1.1 3.483e-251 782.0
PJD1_k127_5485553_12 peptidoglycan binding K03642 - - 0.00000000000000000000000000000000000000000000000009344 184.0
PJD1_k127_5485553_13 Regulatory protein, FmdB family - - - 0.0000000000000000000000000000004034 126.0
PJD1_k127_5485553_17 PIN domain K07063 - - 0.0002839 44.0
PJD1_k127_5485553_2 - K01992 - - 3.053e-234 739.0
PJD1_k127_5485553_4 ATPase activity K01990,K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005438 468.0
PJD1_k127_5485553_5 TIGRFAM RecB family nuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 467.0
PJD1_k127_5485553_6 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 438.0
PJD1_k127_5485553_7 - K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 379.0
PJD1_k127_5485553_8 spore germination - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 330.0
PJD1_k127_5485553_9 phosphate ion binding K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 329.0
PJD1_k127_5542575_0 PD-(D/E)XK nuclease superfamily - - - 1.75e-272 866.0
PJD1_k127_5542575_1 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 366.0
PJD1_k127_5542575_2 Thioredoxin domain - - - 0.0000000000000000000000000000000000000003518 150.0
PJD1_k127_5542575_3 PFAM Integrase catalytic - - - 0.000000000000000000000000000000000000005337 156.0
PJD1_k127_5555232_0 Protein of unknown function (DUF423) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000001107 160.0
PJD1_k127_5559657_0 alanine dehydrogenase activity K00259 GO:0000286,GO:0001666,GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009628,GO:0009653,GO:0009987,GO:0016020,GO:0016054,GO:0016491,GO:0016638,GO:0019752,GO:0030154,GO:0030312,GO:0030435,GO:0032502,GO:0036293,GO:0043436,GO:0043934,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048646,GO:0048856,GO:0048869,GO:0050896,GO:0055114,GO:0070482,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 538.0
PJD1_k127_5559657_1 - - - - 0.000000000000000000000000002242 113.0
PJD1_k127_5559657_2 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0016787,GO:0016817,GO:0016818,GO:0050896 3.6.1.7 0.00000000000000000002298 94.0
PJD1_k127_5559657_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03087 - - 0.000000000000000007874 86.0
PJD1_k127_5559657_4 Belongs to the 'phage' integrase family - - - 0.0004742 44.0
PJD1_k127_5560065_0 Glycosyl hydrolases family 15 - - - 3.887e-286 890.0
PJD1_k127_5560065_1 amino acid - - - 9.149e-242 756.0
PJD1_k127_5560065_10 ATPase family associated with various cellular activities (AAA) K10126 - - 0.00000000000000003301 86.0
PJD1_k127_5560065_11 Putative Ig domain - - - 0.000000001279 62.0
PJD1_k127_5560065_12 Peptidase S24-like - - - 0.000000001356 67.0
PJD1_k127_5560065_13 Belongs to the TPP enzyme family K00156,K00158 - 1.2.3.3,1.2.5.1 0.0002699 44.0
PJD1_k127_5560065_2 Vitamin K epoxide reductase family - - - 6.976e-241 767.0
PJD1_k127_5560065_3 Belongs to the arginase family K01480 - 3.5.3.11 6.017e-221 688.0
PJD1_k127_5560065_4 Glucose-6-phosphate dehydrogenase, NAD binding domain K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000515 577.0
PJD1_k127_5560065_6 Cytochrome c K03611 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002282 257.0
PJD1_k127_5560065_7 chlorophyll binding K02051,K03286 - - 0.000000000000000000000000000000000000000000003163 177.0
PJD1_k127_5560065_8 IMP dehydrogenase activity K09137 - - 0.0000000000000000000000000000000000001373 148.0
PJD1_k127_5560065_9 transposase and inactivated derivatives, IS30 family - - - 0.00000000000000000000000000001498 120.0
PJD1_k127_5567943_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 438.0
PJD1_k127_5567943_1 Cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009224 339.0
PJD1_k127_5567943_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006274 315.0
PJD1_k127_5567943_3 transposase and inactivated derivatives, IS30 family - - - 0.0000000000000000000000000000000000000000006689 156.0
PJD1_k127_5567943_4 PFAM blue (type 1) copper domain protein K00368 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1 0.0000000000000005093 84.0
PJD1_k127_5568943_0 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 590.0
PJD1_k127_5568943_1 Evidence 2b Function of strongly homologous gene K01740,K03430,K05306,K09469 GO:0003674,GO:0003824 2.5.1.49,2.6.1.37,3.11.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 575.0
PJD1_k127_5568943_10 lysyltransferase activity K07027 - - 0.000000000000000000000000000000007562 140.0
PJD1_k127_5568943_2 lysyltransferase activity K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 407.0
PJD1_k127_5568943_3 lysyltransferase activity K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 383.0
PJD1_k127_5568943_4 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 362.0
PJD1_k127_5568943_5 Belongs to the TPP enzyme family K09459 - 4.1.1.82 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 340.0
PJD1_k127_5568943_6 PFAM transposase, IS4 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 307.0
PJD1_k127_5568943_7 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K09459 - 4.1.1.82 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005708 277.0
PJD1_k127_5569122_0 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000000000000000000000000003113 237.0
PJD1_k127_5569122_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000004625 228.0
PJD1_k127_5569122_2 protoporphyrinogen oxidase activity - - - 0.00000000000000000000000000000000000000000000000000000000001701 211.0
PJD1_k127_5570305_0 Sodium/calcium exchanger protein K07300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007931 391.0
PJD1_k127_5570305_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 372.0
PJD1_k127_5570305_10 Glucose / Sorbosone dehydrogenase - - - 0.000000000857 65.0
PJD1_k127_5570305_11 Redoxin - - - 0.0000001654 61.0
PJD1_k127_5570305_3 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000005376 160.0
PJD1_k127_5570305_4 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896,GO:0051087 - 0.000000000000000000000000000007299 121.0
PJD1_k127_5570305_6 Redoxin - - - 0.0000000000000000000000009662 106.0
PJD1_k127_5570305_7 Regulatory protein, FmdB family - - - 0.000000000000000000000001594 108.0
PJD1_k127_5571219_0 ABC1 family K03688 - - 0.0 1062.0
PJD1_k127_5571219_1 Sterile alpha motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 432.0
PJD1_k127_5571219_2 tRNA (cytosine(38)-C(5))-methyltransferase K15336 GO:0000723,GO:0001510,GO:0001975,GO:0002230,GO:0002682,GO:0002684,GO:0002697,GO:0002831,GO:0003674,GO:0003824,GO:0003886,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0007275,GO:0007568,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008340,GO:0008757,GO:0009008,GO:0009266,GO:0009408,GO:0009410,GO:0009451,GO:0009628,GO:0009636,GO:0009790,GO:0009892,GO:0009987,GO:0010033,GO:0010243,GO:0010259,GO:0010467,GO:0010468,GO:0010494,GO:0010605,GO:0010629,GO:0014075,GO:0016043,GO:0016070,GO:0016363,GO:0016427,GO:0016428,GO:0016458,GO:0016740,GO:0016741,GO:0019222,GO:0030488,GO:0031347,GO:0031349,GO:0031974,GO:0031981,GO:0032101,GO:0032200,GO:0032259,GO:0032501,GO:0032502,GO:0032776,GO:0032991,GO:0034399,GO:0034470,GO:0034641,GO:0034660,GO:0035770,GO:0036464,GO:0042221,GO:0042493,GO:0042592,GO:0043045,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043900,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044728,GO:0045088,GO:0045089,GO:0046483,GO:0048518,GO:0048519,GO:0048583,GO:0048584,GO:0048856,GO:0050688,GO:0050691,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051276,GO:0060249,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0080134,GO:0090116,GO:0090304,GO:0097366,GO:0140097,GO:0140098,GO:0140101,GO:1901360,GO:1901538,GO:1901698,GO:1990904 2.1.1.204 0.00041 49.0
PJD1_k127_5572300_0 PFAM NAD-dependent epimerase dehydratase - - - 7.245e-199 632.0
PJD1_k127_5572300_1 Evidence 4 Homologs of previously reported genes of K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006403 555.0
PJD1_k127_5572300_2 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000909 432.0
PJD1_k127_5572300_3 cobalamin binding K21089,K21972,K22491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 322.0
PJD1_k127_5572300_4 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000001253 109.0
PJD1_k127_5597708_0 Transcriptional regulator, Crp Fnr family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 288.0
PJD1_k127_5597708_1 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000006507 126.0
PJD1_k127_5616661_0 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000911 277.0
PJD1_k127_5616661_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000002952 226.0
PJD1_k127_5616661_3 AMP binding - - - 0.00000000000000000214 87.0
PJD1_k127_5617365_0 DNA topoisomerase II activity K03167 - 5.99.1.3 1.457e-212 668.0
PJD1_k127_5617365_1 DNA topoisomerase VI subunit A K03166 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 337.0
PJD1_k127_5617628_0 ATP-dependent DNA helicase (RecQ) K03654 - 3.6.4.12 2.973e-288 897.0
PJD1_k127_5617628_1 peptide catabolic process - - - 3.994e-230 735.0
PJD1_k127_5617628_10 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 308.0
PJD1_k127_5617628_11 metal cluster binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001288 272.0
PJD1_k127_5617628_12 self proteolysis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003191 256.0
PJD1_k127_5617628_13 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001611 246.0
PJD1_k127_5617628_14 PAP2 superfamily K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000007457 188.0
PJD1_k127_5617628_15 lipid-A-disaccharide synthase activity - - - 0.00000000000000000000000000000000000000003985 153.0
PJD1_k127_5617628_16 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000000000000003488 148.0
PJD1_k127_5617628_17 protein secretion K03116,K03117 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0040007,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.00000000000000000000000000000000002203 136.0
PJD1_k127_5617628_18 S23 ribosomal protein - - - 0.000000000000000000000000000003149 124.0
PJD1_k127_5617628_19 protein conserved in bacteria - - - 0.0000000000000000000000000001012 119.0
PJD1_k127_5617628_2 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 2.46e-220 697.0
PJD1_k127_5617628_20 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000000001796 104.0
PJD1_k127_5617628_21 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.0000000000000000004013 89.0
PJD1_k127_5617628_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 1.111e-212 675.0
PJD1_k127_5617628_4 acr, cog1565 K00412,K00971,K02275,K02389,K03177,K17624 - 1.9.3.1,2.7.7.13,3.2.1.97,5.4.99.25 1.804e-200 636.0
PJD1_k127_5617628_5 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 588.0
PJD1_k127_5617628_6 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 529.0
PJD1_k127_5617628_7 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 441.0
PJD1_k127_5617628_8 Phosphoserine phosphatase K02203 - 2.7.1.39,3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 349.0
PJD1_k127_5617628_9 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 339.0
PJD1_k127_5619576_0 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 8.409e-266 821.0
PJD1_k127_5619576_1 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00170 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 587.0
PJD1_k127_5619576_2 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 479.0
PJD1_k127_5619576_3 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 454.0
PJD1_k127_5619576_4 Mitochondrial small ribosomal subunit Rsm22 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007121 362.0
PJD1_k127_5619576_5 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000001918 239.0
PJD1_k127_5619576_6 Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000001036 184.0
PJD1_k127_5630133_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 9.655e-256 800.0
PJD1_k127_5630133_1 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000137 259.0
PJD1_k127_5630133_2 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.000000000000000000000000000002302 131.0
PJD1_k127_5651549_0 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 570.0
PJD1_k127_5651549_1 thiolester hydrolase activity K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007257 389.0
PJD1_k127_5651549_2 Lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 336.0
PJD1_k127_5651549_3 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.00000000000000000000000000000004127 126.0
PJD1_k127_5651549_4 TRL-like protein family - - - 0.0000000000000000000000118 105.0
PJD1_k127_5651549_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K16079 - - 0.000000000000000000004836 101.0
PJD1_k127_5654924_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 2.287e-264 816.0
PJD1_k127_5654924_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 494.0
PJD1_k127_5654924_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000003891 251.0
PJD1_k127_5654924_3 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism - - - 0.0000000000000000000000000000000000000000000000000000000003456 203.0
PJD1_k127_5654924_4 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000000000000000000000000000000000000001472 181.0
PJD1_k127_5654924_5 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000001327 137.0
PJD1_k127_5654924_6 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000000007325 130.0
PJD1_k127_5654924_7 PFAM YCII-related K09780 - - 0.000000000000000000418 90.0
PJD1_k127_5654924_8 Tetratricopeptide repeat - - - 0.0000003901 62.0
PJD1_k127_5658938_0 COGs COG1132 ABC-type multidrug transport system ATPase and permease components K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005793 577.0
PJD1_k127_5658938_1 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000001697 225.0
PJD1_k127_5658938_3 - - - - 0.00003323 55.0
PJD1_k127_5659985_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1066.0
PJD1_k127_5659985_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 7.149e-247 766.0
PJD1_k127_5659985_10 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 360.0
PJD1_k127_5659985_11 O-Antigen Polymerase K02847 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 314.0
PJD1_k127_5659985_12 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 293.0
PJD1_k127_5659985_13 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002151 276.0
PJD1_k127_5659985_14 Macrocin-O-methyltransferase (TylF) K05303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006388 277.0
PJD1_k127_5659985_15 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001589 235.0
PJD1_k127_5659985_16 signal-transduction protein containing cAMP-binding and CBS domains K02342,K05847,K07182 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000009162 220.0
PJD1_k127_5659985_17 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000005353 215.0
PJD1_k127_5659985_18 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000004433 198.0
PJD1_k127_5659985_19 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000001025 197.0
PJD1_k127_5659985_2 Competence protein K02238 - - 2.145e-223 719.0
PJD1_k127_5659985_20 Glycosyl transferase, family 2 K07011 - - 0.00000000000000000000000000000000000000000000000003712 191.0
PJD1_k127_5659985_21 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000004114 174.0
PJD1_k127_5659985_22 COG0438 Glycosyltransferase - - - 0.000000000000000000000000000000007252 142.0
PJD1_k127_5659985_23 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000008373 139.0
PJD1_k127_5659985_24 Sulfurtransferase TusA - - - 0.00000000000000000000000000007566 117.0
PJD1_k127_5659985_25 Transposase - - - 0.00000000000000000000000002465 108.0
PJD1_k127_5659985_26 Methionine biosynthesis protein MetW - - - 0.00000000000000000576 92.0
PJD1_k127_5659985_27 polysaccharide export K01991 - - 0.000000002667 67.0
PJD1_k127_5659985_3 Belongs to the precorrin methyltransferase family K13542 - 2.1.1.107,4.2.1.75 1.911e-215 680.0
PJD1_k127_5659985_4 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 1.177e-210 663.0
PJD1_k127_5659985_5 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 530.0
PJD1_k127_5659985_6 NUBPL iron-transfer P-loop NTPase K16554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 454.0
PJD1_k127_5659985_7 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 429.0
PJD1_k127_5659985_8 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 392.0
PJD1_k127_5659985_9 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 385.0
PJD1_k127_5668040_0 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides K08281,K12132 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008936,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0018130,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0030145,GO:0034641,GO:0034654,GO:0043094,GO:0043167,GO:0043169,GO:0043173,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.11.1,3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000001418 246.0
PJD1_k127_5668040_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000001585 243.0
PJD1_k127_5668040_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K12263 - - 0.0000000000000000000000000000000000000000000005655 169.0
PJD1_k127_5668800_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1347.0
PJD1_k127_5668800_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 4.281e-230 717.0
PJD1_k127_5668800_10 cell redox homeostasis - - - 0.0000000000000000000000000000000000000000000000000000000002972 208.0
PJD1_k127_5668800_11 Squalene-hopene cyclase C-terminal domain K06045 - 4.2.1.129,5.4.99.17 0.000000000000000000000000000000000000000509 152.0
PJD1_k127_5668800_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007287 552.0
PJD1_k127_5668800_3 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 469.0
PJD1_k127_5668800_4 oxidoreductase K10960 - 1.3.1.111,1.3.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 441.0
PJD1_k127_5668800_5 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008945 402.0
PJD1_k127_5668800_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 396.0
PJD1_k127_5668800_7 His Kinase A (phosphoacceptor) domain K02484,K07636,K07768 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009416 389.0
PJD1_k127_5668800_8 Transcriptional regulatory protein, C terminal K07658 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 353.0
PJD1_k127_5668800_9 Tetratricopeptide repeat K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 337.0
PJD1_k127_56749_0 Belongs to the citrate synthase family K01647,K01659 - 2.3.3.1,2.3.3.5 7.456e-208 650.0
PJD1_k127_56749_3 arsenate reductase (glutaredoxin) activity K00537 - 1.20.4.1 0.000000000000000000000000001611 113.0
PJD1_k127_56749_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000009509 93.0
PJD1_k127_5674930_0 WD40-like Beta Propeller Repeat K03641 - - 2.012e-226 707.0
PJD1_k127_5674930_1 Periplasmic binding protein - - - 1.562e-221 708.0
PJD1_k127_5674930_10 Outer membrane lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 292.0
PJD1_k127_5674930_11 Transposase K01991,K02557,K07161,K07484 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 302.0
PJD1_k127_5674930_12 MotA/TolQ/ExbB proton channel family K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001199 275.0
PJD1_k127_5674930_13 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001118 266.0
PJD1_k127_5674930_14 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000222 265.0
PJD1_k127_5674930_15 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001189 253.0
PJD1_k127_5674930_16 Biopolymer transport protein ExbD/TolR K03560 - - 0.00000000000000000000000000000000000000000000000000000000000000007991 225.0
PJD1_k127_5674930_18 energy transducer activity K03646,K03832 - - 0.000000000000000000000000000000000000000000000000000003093 204.0
PJD1_k127_5674930_19 Peptidase M50 - - - 0.000000000000000000000000000000000000000000000000000006737 199.0
PJD1_k127_5674930_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 5.577e-219 695.0
PJD1_k127_5674930_20 Trypsin K04771 - 3.4.21.107 0.0000000000113 68.0
PJD1_k127_5674930_21 - - - - 0.0000001251 53.0
PJD1_k127_5674930_3 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007898 541.0
PJD1_k127_5674930_4 Evidence 5 No homology to any previously reported sequences K07126 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 514.0
PJD1_k127_5674930_5 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 422.0
PJD1_k127_5674930_6 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009267 396.0
PJD1_k127_5674930_7 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007037 387.0
PJD1_k127_5674930_8 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 321.0
PJD1_k127_5674930_9 Phage integrase, N-terminal SAM-like domain K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 319.0
PJD1_k127_5681773_0 tail specific protease K03797 - 3.4.21.102 7.569e-215 675.0
PJD1_k127_5681773_1 Peptidase family M23 K21471 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 479.0
PJD1_k127_5681773_2 ABC transporter K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 331.0
PJD1_k127_5681773_3 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 323.0
PJD1_k127_5681773_4 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003973 283.0
PJD1_k127_5681773_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003745 280.0
PJD1_k127_5681773_6 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000552 187.0
PJD1_k127_5681773_7 Uncharacterised protein family UPF0102 K07460 - - 0.0000000000000000000000000000000000000000000003295 169.0
PJD1_k127_5681773_8 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000686 44.0
PJD1_k127_5684880_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1397.0
PJD1_k127_5686206_0 C-terminal, D2-small domain, of ClpB protein K03696 - - 0.0 1493.0
PJD1_k127_5686206_1 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 3.392e-253 786.0
PJD1_k127_5686206_10 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001425 276.0
PJD1_k127_5686206_11 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000001779 208.0
PJD1_k127_5686206_12 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000000000000000000000000002637 206.0
PJD1_k127_5686206_13 belongs to the thioredoxin family K14949,K20543 - 2.7.11.1 0.0000000000000000000000000000000000000000000000001617 185.0
PJD1_k127_5686206_14 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000000000000000000003408 152.0
PJD1_k127_5686206_2 'glutamate synthase K00528,K03388 - 1.18.1.2,1.19.1.1,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 7.005e-225 704.0
PJD1_k127_5686206_3 GTP-binding GTPase Middle Region K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005168 532.0
PJD1_k127_5686206_4 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006522 516.0
PJD1_k127_5686206_5 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 504.0
PJD1_k127_5686206_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 429.0
PJD1_k127_5686206_7 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 340.0
PJD1_k127_5686206_8 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 326.0
PJD1_k127_5686206_9 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 291.0
PJD1_k127_5688199_0 aerobic electron transport chain K00425,K08738 - 1.10.3.14 0.0 1015.0
PJD1_k127_5688199_1 Evidence 5 No homology to any previously reported sequences K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000968 511.0
PJD1_k127_5688199_2 Cytochrome c K02305,K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 415.0
PJD1_k127_5688199_3 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009673 377.0
PJD1_k127_5688199_4 Ethylbenzene dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005409 355.0
PJD1_k127_5688199_5 Cytochrome c K08738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 310.0
PJD1_k127_5688199_6 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 301.0
PJD1_k127_5690050_0 ATPase activity K01990 - - 6.827e-303 941.0
PJD1_k127_5690050_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 1.986e-217 683.0
PJD1_k127_5690050_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 475.0
PJD1_k127_5690050_3 HlyD family secretion protein K01993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 451.0
PJD1_k127_5690050_4 ABC-2 type transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 374.0
PJD1_k127_5690050_5 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 342.0
PJD1_k127_5690050_6 integral membrane protein - - - 0.000000000000000000000000000000001286 138.0
PJD1_k127_5690050_7 cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.000000000000000000000000000000001989 141.0
PJD1_k127_5694366_0 Evidence 2b Function of strongly homologous gene K02584,K12266,K15836,K21009 - - 5.24e-203 643.0
PJD1_k127_5699639_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1509.0
PJD1_k127_5699639_1 aerobic electron transport chain K00425,K08738 - 1.10.3.14 0.0 1172.0
PJD1_k127_5699639_10 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001833 248.0
PJD1_k127_5699639_11 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000008701 173.0
PJD1_k127_5699639_12 Preprotein translocase subunit K03210 - - 0.00000000000000000000000000000000002363 138.0
PJD1_k127_5699639_14 Protein of unknown function (DUF3800) - - - 0.00000004907 63.0
PJD1_k127_5699639_2 Cytochrome c K00405 - - 6.105e-313 966.0
PJD1_k127_5699639_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 2.126e-279 866.0
PJD1_k127_5699639_4 Arginyl tRNA synthetase N terminal dom K01887 - 6.1.1.19 4.017e-266 830.0
PJD1_k127_5699639_5 phosphorelay signal transduction system - - - 2.456e-208 659.0
PJD1_k127_5699639_6 Cytochrome c K00405 - - 1.486e-205 647.0
PJD1_k127_5699639_7 Cytochrome c - - - 3.152e-199 623.0
PJD1_k127_5699639_8 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 554.0
PJD1_k127_5699639_9 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 476.0
PJD1_k127_5705091_0 cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005209 505.0
PJD1_k127_5705091_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009435 500.0
PJD1_k127_5705091_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 359.0
PJD1_k127_5705091_3 Autoinducer binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001106 248.0
PJD1_k127_5705091_4 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000815 54.0
PJD1_k127_5714047_0 peptidyl-tyrosine sulfation - - - 2.325e-211 674.0
PJD1_k127_5714047_1 obsolete transcription factor activity, core RNA polymerase II binding K06959 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0044424,GO:0044444,GO:0044464,GO:0050896 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 558.0
PJD1_k127_5714047_2 resolution of meiotic recombination intermediates K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 354.0
PJD1_k127_5714047_3 wobble position uridine ribose methylation K03216 GO:0001510,GO:0002128,GO:0002130,GO:0002131,GO:0002132,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000000000000000000519 262.0
PJD1_k127_5714047_4 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000000000000000000000000000000000000000001265 196.0
PJD1_k127_5716720_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 2.616e-217 682.0
PJD1_k127_5716720_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 287.0
PJD1_k127_5716720_2 signal-transduction protein containing cAMP-binding and CBS domains K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000006862 171.0
PJD1_k127_5716720_3 Glucoamylase and related glycosyl hydrolases - - - 0.0000000000000000000000002516 106.0
PJD1_k127_5721835_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0 1244.0
PJD1_k127_5721835_1 NADH-quinone oxidoreductase K00341 - 1.6.5.3 0.0 1017.0
PJD1_k127_5721835_10 2 iron, 2 sulfur cluster binding K00334,K03943 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 309.0
PJD1_k127_5721835_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 302.0
PJD1_k127_5721835_12 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000006104 212.0
PJD1_k127_5721835_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000005582 196.0
PJD1_k127_5721835_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000000001762 151.0
PJD1_k127_5721835_15 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286,K12976,K16079 - - 0.000000000000000114 90.0
PJD1_k127_5721835_16 phosphorelay sensor kinase activity K16923 - - 0.00000003499 65.0
PJD1_k127_5721835_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 4.07e-310 962.0
PJD1_k127_5721835_3 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 2.686e-253 785.0
PJD1_k127_5721835_4 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00342 - 1.6.5.3 3.787e-238 745.0
PJD1_k127_5721835_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 1.432e-204 649.0
PJD1_k127_5721835_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 571.0
PJD1_k127_5721835_7 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000683 515.0
PJD1_k127_5721835_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008554 350.0
PJD1_k127_5721835_9 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008658 330.0
PJD1_k127_5724383_0 Hsp70 protein K04043,K04044 - - 0.0 1038.0
PJD1_k127_5724383_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 2.041e-230 716.0
PJD1_k127_5724383_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 544.0
PJD1_k127_5724383_3 DnaJ molecular chaperone homology domain K04082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 286.0
PJD1_k127_5724383_4 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000304 253.0
PJD1_k127_5724383_5 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001644 251.0
PJD1_k127_5724383_6 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001816 245.0
PJD1_k127_5724383_7 nitric oxide dioxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000001715 232.0
PJD1_k127_5724383_8 Iron-sulphur cluster biosynthesis K13628 - - 0.0000000000000000000000000000000000000000000000000000000000007186 211.0
PJD1_k127_5724383_9 Iron-sulphur cluster assembly - - - 0.0000000000000000000000000000000002521 132.0
PJD1_k127_5729457_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 296.0
PJD1_k127_5729457_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000345 280.0
PJD1_k127_5729457_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001823 257.0
PJD1_k127_5729457_3 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001408 235.0
PJD1_k127_5729457_4 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000001313 190.0
PJD1_k127_5729457_6 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000004146 164.0
PJD1_k127_5729457_7 Diguanylate cyclase - - - 0.000000000000000000006542 98.0
PJD1_k127_5729457_9 Putative Ig domain - - - 0.0000004447 63.0
PJD1_k127_5752986_0 PFAM transposase IS4 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 555.0
PJD1_k127_5752986_1 Pas domain K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 494.0
PJD1_k127_5752986_2 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006466 286.0
PJD1_k127_5752986_3 - - - - 0.0000000000000000000000000000000000000008425 149.0
PJD1_k127_5752986_4 Transcriptional regulatory protein, C terminal - - - 0.00000000003138 75.0
PJD1_k127_5760903_0 Transglycosylase K05365,K05366 - 2.4.1.129,3.4.16.4 1.7e-300 940.0
PJD1_k127_5760903_1 symporter activity K03307,K14387 - - 1.055e-208 659.0
PJD1_k127_5760903_2 (ABC) transporter K15738 - - 5.469e-198 623.0
PJD1_k127_5760903_3 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 402.0
PJD1_k127_5760903_4 Peptidyl-prolyl cis-trans isomerase K01802,K03772,K03773 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 326.0
PJD1_k127_5760903_5 Peptidyl-prolyl cis-trans isomerase K01802,K03772,K03773 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000221 284.0
PJD1_k127_5760903_6 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000004746 235.0
PJD1_k127_5760903_7 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000000000000000000694 190.0
PJD1_k127_5760903_9 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000004442 132.0
PJD1_k127_5765335_0 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000006033 224.0
PJD1_k127_5765335_1 PFAM Endonuclease exonuclease phosphatase K06896 - 3.1.3.90 0.00000000000000000000000000000000000000000000000000001281 202.0
PJD1_k127_5772690_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002036 261.0
PJD1_k127_5797832_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 8.89e-305 952.0
PJD1_k127_5797832_1 Flagellar basal body rod FlgEFG protein C-terminal K02396 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 497.0
PJD1_k127_5797832_2 Bacterial flagellin N-terminal helical region K02397 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005901 340.0
PJD1_k127_5797832_3 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.0000000000000000000000000000000000000000000000000000000007078 205.0
PJD1_k127_5797832_4 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563,K13626 - - 0.000000000000000000000000001307 114.0
PJD1_k127_5811217_0 PFAM Cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007685 507.0
PJD1_k127_5811217_1 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003037 278.0
PJD1_k127_5811217_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000001236 158.0
PJD1_k127_5811217_3 - - - - 0.00000000000001291 80.0
PJD1_k127_5840910_0 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0 1503.0
PJD1_k127_5840910_1 Belongs to the peptidase S8 family K01406 - 3.4.24.40 0.0000000000000000000000000000000000000000000003918 195.0
PJD1_k127_5863361_0 aerobic electron transport chain K00425,K08738 - 1.10.3.14 2.352e-284 884.0
PJD1_k127_5863361_1 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 430.0
PJD1_k127_5863361_4 Evidence 4 Homologs of previously reported genes of K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000002013 174.0
PJD1_k127_5881372_0 TonB-dependent receptor - - - 7.114e-288 892.0
PJD1_k127_5881372_1 response to nickel cation K07722 GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016151,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0032991,GO:0032993,GO:0042802,GO:0043167,GO:0043169,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071840,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000000000000000000000000000000000000000000000000004702 182.0
PJD1_k127_5881372_2 Domain of unknown function (DUF3842) - - - 0.0000000000000000000000000000001463 128.0
PJD1_k127_58827_0 hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000000002104 209.0
PJD1_k127_58827_2 addiction module killer protein - - - 0.000000000000000000000000000000000000000007113 155.0
PJD1_k127_58827_3 Cytochrome c K02305,K17223 - - 0.00000000000000000000000000003493 122.0
PJD1_k127_58827_4 addiction module antidote protein - - - 0.0000000000000000000000696 98.0
PJD1_k127_58827_5 Cytochrome c K00406 - - 0.0000000000000001502 85.0
PJD1_k127_5884883_0 Aminomethyltransferase folate-binding domain K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 491.0
PJD1_k127_5884883_1 FIST C domain - GO:0008150,GO:0040007 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003157 446.0
PJD1_k127_5884883_2 Peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000004359 192.0
PJD1_k127_5912674_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007541 591.0
PJD1_k127_5912674_1 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K08070 - 1.3.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 424.0
PJD1_k127_5912674_2 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000008771 229.0
PJD1_k127_5912674_3 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.000009283 51.0
PJD1_k127_5912674_4 hyperosmotic response K04065 - - 0.00002199 52.0
PJD1_k127_5930696_0 cell redox homeostasis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002221 246.0
PJD1_k127_5930696_1 - - - - 0.00000000000002182 76.0
PJD1_k127_5936066_0 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 408.0
PJD1_k127_5936066_1 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 357.0
PJD1_k127_5936066_4 Binds directly to 16S ribosomal RNA K02968 - - 0.00004552 50.0
PJD1_k127_5940973_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2494.0
PJD1_k127_5940973_1 RNA polymerase beta subunit external 1 domain K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1614.0
PJD1_k127_5940973_10 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000001068 89.0
PJD1_k127_5940973_11 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000002882 81.0
PJD1_k127_5940973_12 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000002111 76.0
PJD1_k127_5940973_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1248.0
PJD1_k127_5940973_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 460.0
PJD1_k127_5940973_4 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008777 392.0
PJD1_k127_5940973_5 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 324.0
PJD1_k127_5940973_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002354 259.0
PJD1_k127_5940973_7 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000003403 233.0
PJD1_k127_5940973_8 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000006281 219.0
PJD1_k127_5940973_9 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000000000002944 102.0
PJD1_k127_5972256_0 MMPL family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 544.0
PJD1_k127_5972256_1 Beta-ketoacyl synthase, C-terminal domain K00647 - 2.3.1.41 0.000000000000000000000008548 107.0
PJD1_k127_5972256_2 Fatty acyl CoA synthetase - - - 0.000000000000000001065 90.0
PJD1_k127_5981642_0 alpha beta alpha domain I K01835 - 5.4.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006383 558.0
PJD1_k127_5981642_1 DNA polymerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 322.0
PJD1_k127_5981642_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07497 - - 0.0000000000000000008266 86.0
PJD1_k127_5984073_0 Transcriptional regulatory protein, C terminal K07658 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 349.0
PJD1_k127_5984073_1 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 317.0
PJD1_k127_5984073_2 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000003575 154.0
PJD1_k127_5984073_4 ATP ADP translocase K03301 - - 0.000000000000000000000000000006041 126.0
PJD1_k127_5984073_6 zinc ion binding K06204 - - 0.000000000000002624 81.0
PJD1_k127_5984073_8 Major facilitator K03301 - - 0.000000000001993 68.0
PJD1_k127_5984073_9 - - - - 0.00000004397 59.0
PJD1_k127_6008381_0 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit C K10946 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 364.0
PJD1_k127_6008381_1 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000005822 218.0
PJD1_k127_6023313_0 PFAM Integrase, catalytic core K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 415.0
PJD1_k127_6023313_1 SEFIR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002054 253.0
PJD1_k127_6023313_2 PFAM Transposase IS3 IS911 K07483 - - 0.000000000000000000000000000000003556 133.0
PJD1_k127_6023313_3 - - - - 0.00000000000000000000002082 100.0
PJD1_k127_6023313_4 SEFIR domain - - - 0.000000000000000005895 87.0
PJD1_k127_6023313_5 PFAM Integrase, catalytic core K07497 - - 0.0000000000001812 70.0
PJD1_k127_6023313_6 - - - - 0.00000000001378 67.0
PJD1_k127_6041724_0 alpha-ribazole phosphatase activity K00850,K21071 - 2.7.1.11,2.7.1.90 0.0 1151.0
PJD1_k127_6041724_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 2.438e-216 682.0
PJD1_k127_6041724_2 Aminotransferase class-III K01845 - 5.4.3.8 3.249e-210 660.0
PJD1_k127_6041724_3 HAD-hyrolase-like K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000544 353.0
PJD1_k127_6041724_5 Bacterial protein of unknown function (DUF937) - - - 0.000000000000000000000000000000000000000000000003629 175.0
PJD1_k127_6041724_6 (Barnase) inhibitor - - - 0.00000000000000000000000000000000000000001497 159.0
PJD1_k127_6041724_8 endoribonuclease activity K03628,K15125 GO:0005575,GO:0005576 - 0.000000000000000000000000000416 119.0
PJD1_k127_6041724_9 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07263 - - 0.00000000000000000000000000172 121.0
PJD1_k127_60745_0 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00322,K00382 - 1.6.1.1,1.8.1.4 1.019e-213 672.0
PJD1_k127_60745_1 hydrolase activity, acting on ester bonds K01563 - 3.8.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 357.0
PJD1_k127_60745_2 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway K03707 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.5.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 316.0
PJD1_k127_60745_3 thioredoxin peroxidase activity K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 289.0
PJD1_k127_60745_4 Conserved carboxylase domain K01960 - 6.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000002522 233.0
PJD1_k127_6113059_0 Serves to protect cells from the toxic effects of hydrogen peroxide K03781 - 1.11.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 333.0
PJD1_k127_6113059_1 PFAM Ribonuclease BN-like family K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 321.0
PJD1_k127_6113059_2 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000006285 170.0
PJD1_k127_6113059_3 Hemerythrin HHE cation binding domain - - - 0.000000000000004912 77.0
PJD1_k127_6148195_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K02660 - - 6.371e-252 792.0
PJD1_k127_6148195_1 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 565.0
PJD1_k127_6148195_10 Type II secretory pathway component ExeA - - - 0.000000000000000000000000000000000000000000000000000000000000000005157 234.0
PJD1_k127_6148195_11 cheY-homologous receiver domain K02658 - - 0.00000000000000000000000000000000000000000000000000000000000007491 219.0
PJD1_k127_6148195_12 PFAM metal-dependent phosphohydrolase, HD sub domain K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000007979 192.0
PJD1_k127_6148195_13 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000001893 147.0
PJD1_k127_6148195_14 chemotaxis K03408,K03415 - - 0.0000000000000000000000000000000009795 136.0
PJD1_k127_6148195_15 chemotaxis K02659,K03408,K03415,K11524 - - 0.00000000000000000000000000003634 124.0
PJD1_k127_6148195_16 PQ loop repeat K15383 - - 0.0000000000000000000001331 99.0
PJD1_k127_6148195_17 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000003418 90.0
PJD1_k127_6148195_19 COG3328 Transposase and inactivated derivatives - - - 0.00000000000000002087 85.0
PJD1_k127_6148195_2 Signal transducing histidine kinase, homodimeric domain K02487,K03407,K06596 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 510.0
PJD1_k127_6148195_21 Single cache domain 3 - - - 0.0003016 53.0
PJD1_k127_6148195_3 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009343 397.0
PJD1_k127_6148195_4 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004215 385.0
PJD1_k127_6148195_5 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 366.0
PJD1_k127_6148195_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 314.0
PJD1_k127_6148195_7 ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 307.0
PJD1_k127_6148195_8 cob(I)yrinic acid a,c-diamide adenosyltransferase activity K00798,K13821 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.2.1.88,1.5.5.2,2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 293.0
PJD1_k127_6148195_9 nuclear chromosome segregation K02666,K03497,K19622 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001722 273.0
PJD1_k127_6167958_0 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1386.0
PJD1_k127_6167958_1 FAD binding domain K00239 - 1.3.5.1,1.3.5.4 2.921e-269 831.0
PJD1_k127_6167958_2 Aconitase C-terminal domain K01681 - 4.2.1.3 1.886e-226 702.0
PJD1_k127_6167958_3 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004684 461.0
PJD1_k127_6239659_0 depolymerase - - - 0.00000000000000000000000000000000000000000003738 167.0
PJD1_k127_6239659_1 Protein of unknown function (DUF3703) - - - 0.00000000000000000000000000000004829 128.0
PJD1_k127_6239659_2 Cupin domain - - - 0.000000000000000000000000000008974 125.0
PJD1_k127_6239659_3 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit C K10946 - - 0.00000000000001421 74.0
PJD1_k127_6345348_0 Phosphate acyltransferases K01897,K05939 - 2.3.1.40,6.2.1.20,6.2.1.3 0.0 1621.0
PJD1_k127_6345348_1 mismatched DNA binding K03555 - - 1.521e-211 676.0
PJD1_k127_6345348_10 similarity to OMNI NTL01RS2573 K07485 - - 0.00000000000000000000000000000000006819 134.0
PJD1_k127_6345348_11 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase - - - 0.00000000000000000000000000001799 121.0
PJD1_k127_6345348_12 thiolester hydrolase activity K06889,K07397 - - 0.000000000000000000001137 96.0
PJD1_k127_6345348_13 amidohydrolase - - - 0.00000000000006467 72.0
PJD1_k127_6345348_14 cellulase activity K18197 - 4.2.2.23 0.000000000003537 77.0
PJD1_k127_6345348_15 amidohydrolase - - - 0.000000003247 61.0
PJD1_k127_6345348_16 - - - - 0.00001653 53.0
PJD1_k127_6345348_17 nucleotidyltransferase activity - - - 0.00002242 48.0
PJD1_k127_6345348_18 - - - - 0.0006269 47.0
PJD1_k127_6345348_2 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 376.0
PJD1_k127_6345348_3 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 313.0
PJD1_k127_6345348_4 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003357 307.0
PJD1_k127_6345348_5 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006544 287.0
PJD1_k127_6345348_6 Ribosomal protein L11 methyltransferase (PrmA) K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002196 277.0
PJD1_k127_6345348_7 Lipase (class 3) - - - 0.00000000000000000000000000000000000000000000000000000000000001655 224.0
PJD1_k127_6345348_8 MOSC domain - - - 0.00000000000000000000000000000000000000000000000000000000002433 211.0
PJD1_k127_6345348_9 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.0000000000000000000000000000000000000000000000000345 179.0
PJD1_k127_6350744_0 Cysteine-rich domain K00241,K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000001248 224.0
PJD1_k127_6353916_0 Response regulator, receiver K20973 - 2.7.13.3 6.031e-195 639.0
PJD1_k127_6353916_1 Response regulator, receiver K20973 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 566.0
PJD1_k127_6353916_2 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 500.0
PJD1_k127_6353916_3 response regulator, receiver K03413,K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 297.0
PJD1_k127_6353916_4 Uncharacterized protein conserved in bacteria (DUF2252) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005939 261.0
PJD1_k127_6353916_5 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000000000000003441 211.0
PJD1_k127_6353916_6 Histidine kinase - - - 0.0000000000000000000000001775 111.0
PJD1_k127_6353916_7 - - - - 0.0000000000000000000000008488 108.0
PJD1_k127_6360083_0 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 3.487e-284 898.0
PJD1_k127_6360083_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002113 235.0
PJD1_k127_6360083_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000456 177.0
PJD1_k127_6364283_0 Pilus assembly protein PilX K07140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 387.0
PJD1_k127_6364283_1 Type II/IV secretion system protein K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000001443 223.0
PJD1_k127_6364283_2 pilus assembly protein PilW K02672 - - 0.000000000000000000000000000000009924 133.0
PJD1_k127_6367780_0 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 1.541e-254 798.0
PJD1_k127_6367780_1 Proton-conducting membrane transporter K12141 - - 4.309e-200 637.0
PJD1_k127_6367780_2 Proton-conducting membrane transporter K12137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000824 534.0
PJD1_k127_6367780_3 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 466.0
PJD1_k127_6367780_4 Proton-conducting membrane transporter K12137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007482 434.0
PJD1_k127_6367780_5 Hydrogenase 4 membrane K12140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007631 336.0
PJD1_k127_6367780_6 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002231 273.0
PJD1_k127_6367780_7 transposase and inactivated derivatives, IS30 family - - - 0.000000000000000000000000000000000000000000000000000000000000001617 219.0
PJD1_k127_6367780_8 transposase and inactivated derivatives, IS30 family - - - 0.0000000002227 61.0
PJD1_k127_6367780_9 Proton-conducting membrane transporter K12137 - - 0.000005792 49.0
PJD1_k127_6384744_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004988 462.0
PJD1_k127_6384744_1 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.0000000000000000000000000008333 119.0
PJD1_k127_6384744_2 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000002095 99.0
PJD1_k127_6384744_3 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.0000000000000001933 85.0
PJD1_k127_6384744_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000718 76.0
PJD1_k127_6391859_0 Endoribonuclease that initiates mRNA decay K18682 - - 1.668e-251 785.0
PJD1_k127_6391859_1 Transglycosylase SLT domain K08309 - - 3.722e-245 781.0
PJD1_k127_6391859_10 exodeoxyribonuclease VII activity K03602 - 3.1.11.6 0.00000000004284 64.0
PJD1_k127_6391859_11 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000001231 61.0
PJD1_k127_6391859_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07263 - - 5.143e-226 707.0
PJD1_k127_6391859_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07263 - - 4.213e-208 656.0
PJD1_k127_6391859_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 479.0
PJD1_k127_6391859_5 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 467.0
PJD1_k127_6391859_6 YmdB-like protein K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000475 436.0
PJD1_k127_6391859_7 tRNA processing K06864,K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 345.0
PJD1_k127_6391859_8 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004905 256.0
PJD1_k127_6391859_9 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000000000000000000187 125.0
PJD1_k127_6420952_0 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 421.0
PJD1_k127_6420952_1 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005366 256.0
PJD1_k127_6420952_2 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008577 247.0
PJD1_k127_6420952_4 Pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.000000000001741 80.0
PJD1_k127_6420952_5 Proton-conducting membrane transporter K12137 - - 0.0001754 45.0
PJD1_k127_6424969_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 3.115e-295 912.0
PJD1_k127_6424969_1 Type III restriction enzyme res subunit - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 3.934e-287 887.0
PJD1_k127_6424969_10 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000001152 96.0
PJD1_k127_6424969_2 helicase activity K05592 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003727,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009266,GO:0009314,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0010468,GO:0010501,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0030312,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0032268,GO:0032270,GO:0032574,GO:0032575,GO:0033554,GO:0033592,GO:0034057,GO:0034248,GO:0034250,GO:0034458,GO:0034459,GO:0034622,GO:0034641,GO:0034655,GO:0042254,GO:0042255,GO:0042273,GO:0042623,GO:0043170,GO:0043487,GO:0043488,GO:0043489,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045934,GO:0046483,GO:0046700,GO:0048255,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0070035,GO:0070417,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097617,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902369,GO:1902373,GO:1903311,GO:1903312,GO:2000112 3.6.4.13 2.603e-256 802.0
PJD1_k127_6424969_3 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 357.0
PJD1_k127_6424969_8 phosphorelay signal transduction system - - - 0.000000000000000000000000000003089 124.0
PJD1_k127_6428386_0 PFAM Citrate transporter - - - 2.37e-202 640.0
PJD1_k127_6428386_1 calcium, potassium:sodium antiporter activity K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 416.0
PJD1_k127_6428386_2 ribosomal large subunit export from nucleus - - - 0.0000000000000000000000000005556 125.0
PJD1_k127_6428386_3 PFAM Citrate transporter - - - 0.00000000000000001143 85.0
PJD1_k127_6437558_1 photoreceptor activity K14986 - 2.7.13.3 0.0000000000003926 77.0
PJD1_k127_6437558_2 transposase IS116 IS110 IS902 family protein K07486 - - 0.000005682 48.0
PJD1_k127_6438533_0 silver ion transport K15726 - - 0.0 1671.0
PJD1_k127_6438533_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07798,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 435.0
PJD1_k127_6455380_0 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 338.0
PJD1_k127_6455380_1 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000009594 223.0
PJD1_k127_6455380_2 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000004636 179.0
PJD1_k127_6463164_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1204.0
PJD1_k127_6463164_1 deoxyhypusine monooxygenase activity K08884 - 2.7.11.1 3.311e-215 687.0
PJD1_k127_6463164_2 23S rRNA (guanine(2445)-N(2))-methyltransferase activity K07444,K12297 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016423,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.173,2.1.1.264 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 421.0
PJD1_k127_6463164_3 GDP-mannose mannosyl hydrolase activity K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001576 260.0
PJD1_k127_6476872_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1063.0
PJD1_k127_6476872_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type K01889 - 6.1.1.20 1.085e-256 799.0
PJD1_k127_6476872_2 B3/4 domain K01890 - 6.1.1.20 9.374e-245 767.0
PJD1_k127_6476872_3 16S rRNA methyltransferase RsmB/F K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005588 473.0
PJD1_k127_6476872_4 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 352.0
PJD1_k127_6476872_5 Translation initiation factor IF-3, C-terminal domain K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 293.0
PJD1_k127_6476872_6 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000001737 198.0
PJD1_k127_6476872_7 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000007912 82.0
PJD1_k127_6476872_8 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000001896 66.0
PJD1_k127_6476872_9 Polyphosphate kinase 2 (PPK2) - - - 0.0000003203 51.0
PJD1_k127_6480888_0 Belongs to the pseudouridine synthase RsuA family K06178,K06181,K06182 - 5.4.99.20,5.4.99.21,5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 290.0
PJD1_k127_6480888_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07285 - - 0.000000000000000000000000000000000000000000000000007128 186.0
PJD1_k127_6480888_2 OmpA family K02557 - - 0.000000000000000000000000000000000000000000000008324 185.0
PJD1_k127_6480888_3 Protein of unknown function (DUF2959) - - - 0.0000000000000009066 80.0
PJD1_k127_6492870_0 twitching motility protein K02670 - - 2.034e-208 653.0
PJD1_k127_6492870_1 Type II/IV secretion system protein K02669 - - 6.424e-203 634.0
PJD1_k127_6492870_2 Cytochrome c K00405 - - 0.00000000000000000000000000000000000000000000007242 173.0
PJD1_k127_6515849_0 Sigma-54 interaction domain K07714 - - 3.258e-214 674.0
PJD1_k127_6515849_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009244 465.0
PJD1_k127_6515849_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 390.0
PJD1_k127_6515849_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001634 292.0
PJD1_k127_6515849_4 sequence-specific DNA binding - - - 0.000000000000000000000000000000009444 131.0
PJD1_k127_6515849_7 Phage integrase family - - - 0.000001102 55.0
PJD1_k127_6515849_8 Belongs to the 'phage' integrase family - - - 0.0003324 50.0
PJD1_k127_6518438_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 0.0 1057.0
PJD1_k127_6518438_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 1.716e-317 981.0
PJD1_k127_6518438_10 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008914 433.0
PJD1_k127_6518438_11 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 414.0
PJD1_k127_6518438_12 metalloendopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 389.0
PJD1_k127_6518438_13 Histidine biosynthesis protein K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 385.0
PJD1_k127_6518438_14 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 362.0
PJD1_k127_6518438_15 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 332.0
PJD1_k127_6518438_16 RNA-DNA hybrid ribonuclease activity K03471 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 326.0
PJD1_k127_6518438_17 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 324.0
PJD1_k127_6518438_18 Phosphoribosyl-AMP cyclohydrolase K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 304.0
PJD1_k127_6518438_19 ACT domain K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 296.0
PJD1_k127_6518438_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 2.732e-277 858.0
PJD1_k127_6518438_20 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001916 282.0
PJD1_k127_6518438_21 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002086 261.0
PJD1_k127_6518438_23 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000003241 160.0
PJD1_k127_6518438_24 Histidine triad (HIT) protein K02503 - - 0.000000000000000000000000000000000000000004454 157.0
PJD1_k127_6518438_25 PFAM AhpC TSA family - - - 0.0000000000000000000000000000000005525 133.0
PJD1_k127_6518438_26 Protein of unknown function (DUF2905) - - - 0.00000000000000000001764 94.0
PJD1_k127_6518438_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 2.285e-245 772.0
PJD1_k127_6518438_4 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 7.769e-201 627.0
PJD1_k127_6518438_5 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 610.0
PJD1_k127_6518438_6 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009052 549.0
PJD1_k127_6518438_7 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 514.0
PJD1_k127_6518438_8 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 448.0
PJD1_k127_6518438_9 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 445.0
PJD1_k127_6536419_0 Protein involved in outer membrane biogenesis K07290 - - 0.0 1255.0
PJD1_k127_6536419_1 Putative diguanylate phosphodiesterase - - - 1.419e-277 869.0
PJD1_k127_6536419_10 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000000001304 177.0
PJD1_k127_6536419_11 PFAM Archease protein family (DUF101 UPF0211) - - - 0.000000000000000000000000000000000000000000001235 170.0
PJD1_k127_6536419_13 Protein of unknown function (DUF465) K09794 - - 0.000000000000000001812 89.0
PJD1_k127_6536419_14 self proteolysis - - - 0.0001425 47.0
PJD1_k127_6536419_2 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 7.81e-260 807.0
PJD1_k127_6536419_3 Metallopeptidase family M24 K01262 - 3.4.11.9 4.653e-195 613.0
PJD1_k127_6536419_4 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 458.0
PJD1_k127_6536419_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007637 435.0
PJD1_k127_6536419_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 391.0
PJD1_k127_6536419_7 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 284.0
PJD1_k127_6536419_9 Glycoprotease family K14742 - - 0.00000000000000000000000000000000000000000000000000000000000000000005543 239.0
PJD1_k127_6548815_0 Cobalamin synthesis protein cobW C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 426.0
PJD1_k127_6548815_1 Nitrile hydratase K01721 - 4.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 356.0
PJD1_k127_6548815_2 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 349.0
PJD1_k127_6548815_3 Phage integrase family - - - 0.0000000000000000000000000000000000000002504 155.0
PJD1_k127_6548815_4 Nitrile hydratase beta subunit - - - 0.0000000000000000000000000000000001109 137.0
PJD1_k127_6548815_5 Subtilase family - - - 0.0000000000000002073 88.0
PJD1_k127_6548815_6 periplasmic K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.0000000000001104 79.0
PJD1_k127_6548815_7 Belongs to the UPF0337 (CsbD) family - - - 0.0001562 45.0
PJD1_k127_6555256_0 Major facilitator Superfamily K08218 - - 1.294e-251 787.0
PJD1_k127_6555256_1 electron transfer activity K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 402.0
PJD1_k127_6555256_2 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K00567,K01247 - 2.1.1.63,3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 319.0
PJD1_k127_6555256_3 oxidation-reduction process - - - 0.000000000000000000000000000000000000000000000000000000000000004548 219.0
PJD1_k127_6600520_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 9.851e-194 626.0
PJD1_k127_6600520_11 tRNA (guanine(37)-N(1))-methyltransferase activity K01091,K01633,K15429 - 1.13.11.81,2.1.1.228,3.1.3.18,4.1.2.25,5.1.99.8 0.0000000000000000000000000000000007788 131.0
PJD1_k127_6600520_12 domain, Protein K18491 - - 0.000000000000000000000005519 109.0
PJD1_k127_6600520_2 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 456.0
PJD1_k127_6600520_3 PHP domain protein K01624,K07053 - 3.1.3.97,4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009225 417.0
PJD1_k127_6600520_4 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 319.0
PJD1_k127_6600520_5 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 306.0
PJD1_k127_6600520_6 protein serine/threonine phosphatase activity K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000004587 260.0
PJD1_k127_6600520_7 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001183 252.0
PJD1_k127_6600520_8 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000004382 228.0
PJD1_k127_6600520_9 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000000000000000000000000000000008246 196.0
PJD1_k127_6619405_0 SMART PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000002937 185.0
PJD1_k127_6619405_1 Autoinducer synthase K13060 - 2.3.1.184 0.0000000000000000000000000000000000004401 150.0
PJD1_k127_6619405_2 Autoinducer binding domain K20334 - - 0.00000000000000000000000000000003632 136.0
PJD1_k127_6619405_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000001246 111.0
PJD1_k127_6619405_4 long-chain fatty acid transporting porin activity K06076 - - 0.000000000000000000000004322 108.0
PJD1_k127_6619405_5 Histidine kinase K07681,K11617 - 2.7.13.3 0.000000000000000000002646 104.0
PJD1_k127_6620740_0 Histidine kinase K07638 - 2.7.13.3 3.871e-312 978.0
PJD1_k127_6620740_1 Histidine kinase K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 448.0
PJD1_k127_6620740_10 tetraacyldisaccharide 4'-kinase activity K09791 - - 0.00000000001478 64.0
PJD1_k127_6620740_2 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007126 253.0
PJD1_k127_6620740_3 Histidine kinase K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005448 256.0
PJD1_k127_6620740_4 protein disulfide oxidoreductase activity K07390 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051536,GO:0051537,GO:0051540 - 0.0000000000000000000000000000000000000000000000000000001851 195.0
PJD1_k127_6620740_5 - - - - 0.000000000000000000000000000000000000002132 156.0
PJD1_k127_6620740_6 - - - - 0.000000000000000000000000004887 113.0
PJD1_k127_6620740_7 Protein of unknown function (DUF433) - - - 0.000000000000000000000000006982 112.0
PJD1_k127_6620740_8 PFAM Plasmid stabilisation system protein - - - 0.0000000000000000000000000132 112.0
PJD1_k127_6620740_9 Belongs to the BolA IbaG family K05527,K22066 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0019538,GO:0022603,GO:0022604,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051604,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0097428,GO:0097659,GO:0106035,GO:1901360,GO:1901362,GO:1901564,GO:1901576 - 0.000000000000000000000000123 111.0
PJD1_k127_6623512_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1167.0
PJD1_k127_66364_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009515 400.0
PJD1_k127_66364_1 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 321.0
PJD1_k127_66364_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000004178 220.0
PJD1_k127_66364_3 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000001658 66.0
PJD1_k127_66364_4 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000001024 53.0
PJD1_k127_6655154_0 TonB-dependent receptor K02014 - - 8.216e-208 651.0
PJD1_k127_6662642_0 Multicopper oxidase K00368,K07233,K22349 - 1.16.3.3,1.7.2.1 0.0 1747.0
PJD1_k127_6662642_1 Multicopper oxidase K00368,K07233,K22349 - 1.16.3.3,1.7.2.1 2.147e-230 713.0
PJD1_k127_6709500_0 rRNA (guanine-N2-)-methyltransferase activity K09846,K13604,K21460 GO:0003674,GO:0003824,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009987,GO:0015994,GO:0015995,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0030493,GO:0030494,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0036067,GO:0036069,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.210,2.1.1.304,2.1.1.333 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 478.0
PJD1_k127_6709500_1 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 453.0
PJD1_k127_6709500_2 membrane K08976 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 361.0
PJD1_k127_6743272_0 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008632 563.0
PJD1_k127_6743272_1 - - - - 0.000000000000000000000003372 108.0
PJD1_k127_6783816_0 Putative vitamin uptake transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 318.0
PJD1_k127_6783816_1 Phage integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 306.0
PJD1_k127_6783816_2 heat shock protein binding K03686,K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 304.0
PJD1_k127_6783816_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000002674 242.0
PJD1_k127_6783816_4 Catalyzes the sodium-dependent transport of glutamate K03312 - - 0.00000000000000000000000004275 110.0
PJD1_k127_6783816_5 Sugar (and other) transporter K08178 - - 0.00000000000000000007025 90.0
PJD1_k127_6783816_6 Transposase - - - 0.000000000000162 75.0
PJD1_k127_6783816_7 Putative transposase - - - 0.000000237 53.0
PJD1_k127_6857785_0 Animal haem peroxidase - - - 0.0 1435.0
PJD1_k127_6857785_1 PhoQ Sensor - - - 3.814e-217 698.0
PJD1_k127_6857785_2 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 1.107e-213 676.0
PJD1_k127_6857785_3 response regulator K02479,K07685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 312.0
PJD1_k127_6857785_4 - K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000155 285.0
PJD1_k127_6857785_6 Small metal-binding protein - - - 0.000000000000000002451 89.0
PJD1_k127_6869114_0 protein catabolic process K13527 GO:0000302,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010035,GO:0010498,GO:0010499,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0019941,GO:0022623,GO:0022624,GO:0030163,GO:0030312,GO:0032991,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042802,GO:0043170,GO:0043335,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044424,GO:0044464,GO:0044877,GO:0050896,GO:0051409,GO:0051603,GO:0051704,GO:0051716,GO:0070628,GO:0070887,GO:0071241,GO:0071704,GO:0071731,GO:0071732,GO:0071944,GO:0097366,GO:0140030,GO:0140035,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170,GO:1902494,GO:1905368,GO:1905369 - 2.105e-319 984.0
PJD1_k127_6869114_1 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000007593 205.0
PJD1_k127_6869114_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000001136 97.0
PJD1_k127_6917688_0 Pterin binding enzyme K00548,K15023 - 2.1.1.13,2.1.1.258 0.0 1867.0
PJD1_k127_6917688_1 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 451.0
PJD1_k127_6917688_2 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 - 1.3.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 338.0
PJD1_k127_6917688_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004521 341.0
PJD1_k127_6917688_6 - - - - 0.00000000000000000000000000000000000000003611 159.0
PJD1_k127_6917688_7 Regulatory protein, FmdB family - - - 0.0000000000000000000000000001894 115.0
PJD1_k127_6932554_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 356.0
PJD1_k127_6932554_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 320.0
PJD1_k127_6932554_2 Putative Competence protein ComGF K02246,K02248 - - 0.000000000000000000000000000000000005485 143.0
PJD1_k127_6932554_3 response regulator K03413 - - 0.000000000000000000000000000007299 121.0
PJD1_k127_6932554_4 pilus assembly protein PilW K02672 - - 0.0000000241 61.0
PJD1_k127_6963730_0 O-methyltransferase activity K13571,K20814 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006464,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016787,GO:0016810,GO:0016811,GO:0017076,GO:0018193,GO:0018205,GO:0019538,GO:0019941,GO:0030163,GO:0030554,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0051603,GO:0070490,GO:0070647,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 3.5.1.119,6.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005845 427.0
PJD1_k127_6963730_1 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine K03433 GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005839,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010498,GO:0016020,GO:0016787,GO:0019538,GO:0019774,GO:0019899,GO:0019941,GO:0030163,GO:0032991,GO:0035375,GO:0040007,GO:0043170,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044424,GO:0044464,GO:0051603,GO:0051704,GO:0070003,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005911 414.0
PJD1_k127_6963730_2 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine K03432 - 3.4.25.1 0.0000000000000000000000000000000000000000000008793 166.0
PJD1_k127_7045165_0 radical SAM domain protein - - - 8.167e-289 891.0
PJD1_k127_7045165_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 4.572e-244 757.0
PJD1_k127_7045165_10 peroxiredoxin activity K00627,K01607 - 2.3.1.12,4.1.1.44 0.00000000000000000000000000000000000000000000000000000004928 197.0
PJD1_k127_7045165_2 Histidine kinase K00060,K07777 - 1.1.1.103,2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 552.0
PJD1_k127_7045165_3 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005122 419.0
PJD1_k127_7045165_4 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 331.0
PJD1_k127_7045165_7 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000445 228.0
PJD1_k127_7045165_8 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000003342 229.0
PJD1_k127_7045165_9 response regulator, receiver K02479 - - 0.000000000000000000000000000000000000000000000000000000000323 209.0
PJD1_k127_7132605_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00003,K00982,K00990,K06950,K15371 GO:0000820,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006521,GO:0008150,GO:0008882,GO:0010565,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0030312,GO:0031323,GO:0033238,GO:0040007,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0060359,GO:0062012,GO:0065007,GO:0070566,GO:0071944,GO:0080090,GO:1901698 1.1.1.3,1.4.1.2,2.7.7.42,2.7.7.59,2.7.7.89 3.451e-270 843.0
PJD1_k127_7132605_1 Bacterial regulatory protein, Fis family K02481,K07713,K07714 - - 5.529e-257 797.0
PJD1_k127_7132605_2 [glutamate-ammonia-ligase] adenylyltransferase activity K00982 GO:0000820,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006521,GO:0008150,GO:0008882,GO:0010565,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0030312,GO:0031323,GO:0033238,GO:0040007,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0060359,GO:0062012,GO:0065007,GO:0070566,GO:0071944,GO:0080090,GO:1901698 2.7.7.42,2.7.7.89 3.079e-201 642.0
PJD1_k127_7132605_3 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 389.0
PJD1_k127_71362_0 amine dehydrogenase activity K01406 - 3.4.24.40 2.66e-224 698.0
PJD1_k127_71362_1 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001275 245.0
PJD1_k127_7139470_0 PFAM RNA-directed DNA polymerase (Reverse transcriptase) K00986 - 2.7.7.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006667 513.0
PJD1_k127_7139470_1 PFAM dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000001334 156.0
PJD1_k127_7149025_0 ATPase activity K01990 - - 7.92e-293 912.0
PJD1_k127_7149025_1 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 508.0
PJD1_k127_7149025_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009843 461.0
PJD1_k127_7149025_3 cell redox homeostasis - - - 0.00000000000000000000000000000000000000000000000000000000000000005494 227.0
PJD1_k127_7149025_4 - - - - 0.000000000000000000000000000001499 128.0
PJD1_k127_7159158_0 COG0491 Zn-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 456.0
PJD1_k127_7159158_1 - - - - 0.0000000002863 62.0
PJD1_k127_7159665_0 peptidyl-tyrosine sulfation - - - 9.877e-267 835.0
PJD1_k127_7159665_1 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299,K03281 - 3.4.17.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 457.0
PJD1_k127_7159665_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 317.0
PJD1_k127_7159665_3 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000584 217.0
PJD1_k127_7159665_4 pterin-4-alpha-carbinolamine dehydratase - - - 0.000000000000001933 89.0
PJD1_k127_7176708_0 AcrB/AcrD/AcrF family - - - 0.0 1679.0
PJD1_k127_7176708_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005718 439.0
PJD1_k127_7176708_2 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 426.0
PJD1_k127_7176708_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000002315 216.0
PJD1_k127_7176708_5 Superoxide dismutase K04565 - 1.15.1.1 0.000000000000000000000000000000009569 135.0
PJD1_k127_7176708_6 Cytochrome c K12263 - - 0.0000000000000000000000000001004 118.0
PJD1_k127_7192608_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 4.71e-228 715.0
PJD1_k127_7192608_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001491 293.0
PJD1_k127_7192608_2 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003758 246.0
PJD1_k127_7192608_3 Evidence 5 No homology to any previously reported sequences K07126 - - 0.000000000000000000000000000000000000000003281 176.0
PJD1_k127_7192608_4 Belongs to the 'phage' integrase family - - - 0.00000000000000005637 81.0
PJD1_k127_7192608_5 - - - - 0.000002163 59.0
PJD1_k127_7207054_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 3.981e-311 961.0
PJD1_k127_7207054_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003321 516.0
PJD1_k127_7207054_2 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006553 302.0
PJD1_k127_7207054_3 Glyoxalase-like domain K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000004179 219.0
PJD1_k127_7207054_4 acetyltransferase K22278 - 3.5.1.104 0.00000000000000000000000000000000000000000000000000000000000002535 219.0
PJD1_k127_7207054_5 Belongs to the peptidase M50B family - - - 0.000000000000000000000000000000000000000000001571 172.0
PJD1_k127_7210403_0 Major facilitator Superfamily K03762 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003732 383.0
PJD1_k127_7210403_1 Uracil DNA glycosylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000008026 239.0
PJD1_k127_7210403_2 COG1145 Ferredoxin - - - 0.000000000000000000000000271 111.0
PJD1_k127_7210403_5 - - - - 0.00000000001074 64.0
PJD1_k127_7211391_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K19585 - - 0.0 1728.0
PJD1_k127_7211391_1 transmembrane transporter activity K18138 - - 0.0 1684.0
PJD1_k127_7211391_2 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT K18139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 598.0
PJD1_k127_7211391_3 PFAM Mo-dependent nitrogenase K00232 - 1.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007539 518.0
PJD1_k127_7211391_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 499.0
PJD1_k127_7211391_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007551 490.0
PJD1_k127_7211391_6 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001461 278.0
PJD1_k127_7211391_7 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000001601 213.0
PJD1_k127_7221747_0 Glycine cleavage system P-protein K00281,K00283 - 1.4.4.2 0.0 1465.0
PJD1_k127_7221747_1 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 7.508e-278 865.0
PJD1_k127_7221747_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 486.0
PJD1_k127_7221747_3 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 392.0
PJD1_k127_7227171_0 glycerophosphoryl diester phosphodiesterase K01113,K01126 - 3.1.3.1,3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003901 291.0
PJD1_k127_7234840_0 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 8.665e-217 688.0
PJD1_k127_7234840_1 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000901 533.0
PJD1_k127_7234840_2 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008223 519.0
PJD1_k127_7234840_3 Glycosyltransferase family 9 (heptosyltransferase) K02841,K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 405.0
PJD1_k127_7234840_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007836 359.0
PJD1_k127_7234840_5 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000000000000000000000000000000000000000000369 237.0
PJD1_k127_7288961_0 S-adenosylmethionine synthetase (AdoMet synthetase) K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 397.0
PJD1_k127_7288961_1 Bacterial PH domain - - - 0.0000000000000000000000000000002529 128.0
PJD1_k127_7288961_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.0000000007082 63.0
PJD1_k127_7323681_0 Squalene-hopene cyclase C-terminal domain K06045 - 4.2.1.129,5.4.99.17 0.0 1041.0
PJD1_k127_7323681_1 adenosylhomocysteine nucleosidase activity K01243,K03527 - 1.17.7.4,3.2.2.9 0.00000000000000000000000000000000000000000000000000000000007722 214.0
PJD1_k127_7323681_2 Permease MlaE K02066 - - 0.0000000000000003609 79.0
PJD1_k127_7331913_0 aldehyde-lyase activity K01621 - 4.1.2.22,4.1.2.9 0.0 1413.0
PJD1_k127_7331913_1 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 0.0 1042.0
PJD1_k127_7331913_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K01652 - 2.2.1.6 1.103e-196 628.0
PJD1_k127_7331913_3 glycolate biosynthetic process K01091,K05967,K07025 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 330.0
PJD1_k127_7331913_4 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000001114 244.0
PJD1_k127_7331913_5 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000000002962 222.0
PJD1_k127_7331913_6 response to oxidative stress K04063 - - 0.0000000000000000000000000000000000000000000000000002033 186.0
PJD1_k127_7331913_7 MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000001097 185.0
PJD1_k127_7360110_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 0.0 1170.0
PJD1_k127_7360110_1 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 4.809e-213 673.0
PJD1_k127_7360110_11 - - - - 0.000000049 59.0
PJD1_k127_7360110_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 601.0
PJD1_k127_7360110_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004443 459.0
PJD1_k127_7360110_4 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 454.0
PJD1_k127_7360110_5 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 381.0
PJD1_k127_7360110_7 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000001711 201.0
PJD1_k127_7360110_9 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.00000000000000000000000000000000007597 137.0
PJD1_k127_7389319_0 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 2.962e-253 795.0
PJD1_k127_7389319_1 NmrA-like family K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 574.0
PJD1_k127_7389319_2 Polyprenyl synthetase K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 462.0
PJD1_k127_7389319_3 Carotenoid biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 387.0
PJD1_k127_7389319_4 Hydrolase K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000005326 239.0
PJD1_k127_7389319_5 PFAM Membrane protein of K08972 - - 0.0000000000000001317 85.0
PJD1_k127_7400703_0 Evidence 2b Function of strongly homologous gene K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004951 539.0
PJD1_k127_7400703_1 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) K03594,K07052 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 469.0
PJD1_k127_7400703_2 imidazolonepropionase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005836 384.0
PJD1_k127_7402253_0 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 1.075e-227 709.0
PJD1_k127_7402253_1 Rhodanese Homology Domain K00529 - 1.18.1.3 2.002e-220 698.0
PJD1_k127_7402253_10 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000003269 88.0
PJD1_k127_7402253_11 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000006978 73.0
PJD1_k127_7402253_12 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000147 75.0
PJD1_k127_7402253_13 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.000000001593 59.0
PJD1_k127_7402253_14 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000001677 64.0
PJD1_k127_7402253_15 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K12263 - - 0.00000001488 56.0
PJD1_k127_7402253_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 577.0
PJD1_k127_7402253_3 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 451.0
PJD1_k127_7402253_4 DnaJ C terminal domain K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 437.0
PJD1_k127_7402253_5 PFAM SufBD protein K07033,K09014,K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 423.0
PJD1_k127_7402253_6 PFAM ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001095 253.0
PJD1_k127_7402253_7 belongs to the thioredoxin family K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000005584 242.0
PJD1_k127_7402253_8 Psort location Cytoplasmic, score 8.96 K18997 - - 0.00000000000000000000001393 103.0
PJD1_k127_7402253_9 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000255 90.0
PJD1_k127_7420440_0 DDE superfamily endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008638 456.0
PJD1_k127_7420440_1 - - - - 0.000000000000000000000001805 106.0
PJD1_k127_7420440_2 Histidine kinase K07675,K20263 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.00000000000009617 83.0
PJD1_k127_7465023_0 pteridine-dependent deoxygenase K18240 - 4.1.3.40,4.1.3.45 0.000000000000000000000000000000000000000000000000000000000000000000134 245.0
PJD1_k127_7465023_1 xylanase chitin deacetylase K22278 - 3.5.1.104 0.0000000000000000001712 99.0
PJD1_k127_7465211_0 belongs to the aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 0.0 1260.0
PJD1_k127_7465211_1 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00162,K21417 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005634 590.0
PJD1_k127_7465211_10 - - - - 0.0000001143 63.0
PJD1_k127_7465211_2 S-acyltransferase activity K00162,K00627 - 1.2.4.1,2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 583.0
PJD1_k127_7465211_3 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00161,K11381 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 567.0
PJD1_k127_7465211_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 463.0
PJD1_k127_7465211_5 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 412.0
PJD1_k127_7465211_6 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000116 248.0
PJD1_k127_7465211_9 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00363,K05710 - 1.7.1.15 0.000000000000000000007799 95.0
PJD1_k127_7465264_0 von Willebrand factor (vWF) type A domain K02448 - - 0.0 1083.0
PJD1_k127_7465264_1 PFAM Copper resistance D K07245 - - 1.174e-283 886.0
PJD1_k127_7465264_10 PFAM Copper resistance protein CopC K07156 - - 0.0000000000000000000000000000000000000000000003279 171.0
PJD1_k127_7465264_11 transposase and inactivated derivatives, IS30 family - - - 0.00000002807 57.0
PJD1_k127_7465264_12 - - - - 0.00002449 54.0
PJD1_k127_7465264_2 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 4.365e-242 752.0
PJD1_k127_7465264_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 508.0
PJD1_k127_7465264_4 Pfam:DUF989 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 328.0
PJD1_k127_7465264_5 ferredoxin-thioredoxin reductase activity K17892 GO:0003674,GO:0003824,GO:0005488,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015979,GO:0016491,GO:0016730,GO:0022900,GO:0030385,GO:0044237,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114 1.8.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000002286 246.0
PJD1_k127_7465264_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001341 234.0
PJD1_k127_7465264_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000004734 234.0
PJD1_k127_7465264_8 - - - - 0.00000000000000000000000000000000000000000000000000001547 196.0
PJD1_k127_7465264_9 - - - - 0.000000000000000000000000000000000000000000000001805 180.0
PJD1_k127_7521725_0 Aldehyde dehydrogenase family - - - 2.238e-216 680.0
PJD1_k127_7521725_1 peptidyl-lysine modification to peptidyl-hypusine K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 580.0
PJD1_k127_7521725_11 PIN domain - - - 0.00000000000000000000000000000003901 130.0
PJD1_k127_7521725_13 response regulator, receiver - - - 0.00000000000000000001339 95.0
PJD1_k127_7521725_14 Belongs to the 'phage' integrase family. XerC subfamily K03733 GO:0000150,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009987,GO:0015074,GO:0032991,GO:0034641,GO:0042150,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0071139,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.0000000000000000001504 103.0
PJD1_k127_7521725_15 SpoVT / AbrB like domain - - - 0.0000000000007919 71.0
PJD1_k127_7521725_16 Citrate transporter - - - 0.000000001596 60.0
PJD1_k127_7521725_17 DNA integration - - - 0.00003331 46.0
PJD1_k127_7521725_2 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines K01480 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 554.0
PJD1_k127_7521725_3 Flagellar Motor Protein K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 386.0
PJD1_k127_7521725_4 arginine decarboxylase activity K02626 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 349.0
PJD1_k127_7521725_5 Belongs to the pseudouridine synthase RsuA family K06178,K06181,K06182 - 5.4.99.20,5.4.99.21,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008924 345.0
PJD1_k127_7521725_6 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007988 330.0
PJD1_k127_7521725_8 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613 329.0
PJD1_k127_7521725_9 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001461 278.0
PJD1_k127_7543481_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 1.729e-243 774.0
PJD1_k127_7543481_1 Phosphoglycerate kinase K00927 - 2.7.2.3 4.543e-222 693.0
PJD1_k127_7543481_2 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 589.0
PJD1_k127_7543481_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 581.0
PJD1_k127_7543481_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 517.0
PJD1_k127_7543481_5 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 379.0
PJD1_k127_7543481_6 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001721 275.0
PJD1_k127_7543481_7 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000000000000000000002205 166.0
PJD1_k127_7543481_8 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000006501 154.0
PJD1_k127_7543481_9 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000000000000000000002013 147.0
PJD1_k127_7590630_0 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 440.0
PJD1_k127_7590630_1 Belongs to the UPF0337 (CsbD) family - - - 0.0000000000000001102 83.0
PJD1_k127_7594302_0 Dimerisation domain K21377 - 2.1.1.302 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 545.0
PJD1_k127_7594302_1 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 393.0
PJD1_k127_7594302_10 - - - - 0.0006429 45.0
PJD1_k127_7594302_3 Bacterial regulatory proteins, tetR family K16137 - - 0.000000000000000000000000000000000000000000000003864 178.0
PJD1_k127_7594302_4 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000001004 158.0
PJD1_k127_7594302_6 SnoaL-like domain - - - 0.00000000000000000000000000000000004542 139.0
PJD1_k127_7594302_7 positive regulation of type IV pilus biogenesis K07343 - - 0.000000000000000000000000000000005627 133.0
PJD1_k127_7594302_8 - - - - 0.00002833 54.0
PJD1_k127_7609518_0 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 431.0
PJD1_k127_7609518_1 coenzyme binding K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 412.0
PJD1_k127_7609518_2 - - - - 0.0000000000000000000000000000000000000000000000000795 186.0
PJD1_k127_7609518_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000001623 153.0
PJD1_k127_7609518_6 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit C K10946 - - 0.00002161 46.0
PJD1_k127_7634434_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007623 609.0
PJD1_k127_7634434_1 protein disulfide oxidoreductase activity K03673 - - 0.00000000000000000000000000000000000000000000000001613 186.0
PJD1_k127_7634434_2 CoA binding domain K06929 - - 0.00000000000000000000000000000000000000000000001171 174.0
PJD1_k127_7634434_3 Domain of unknown function (DUF4112) - - - 0.0000000000000000000005121 100.0
PJD1_k127_7641674_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1411.0
PJD1_k127_7641674_1 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 3.855e-231 726.0
PJD1_k127_7641674_2 Bacterial regulatory protein, Fis family K07715 - - 1.261e-230 722.0
PJD1_k127_7641674_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 560.0
PJD1_k127_7641674_5 inositol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002857 263.0
PJD1_k127_7641674_6 - K07184,K07777,K12065,K13527 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000003189 208.0
PJD1_k127_7641674_9 sequence-specific DNA binding - - - 0.0000000000000000000000000000008681 122.0
PJD1_k127_7647263_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00982,K00990 - 2.7.7.42,2.7.7.59,2.7.7.89 0.0 1089.0
PJD1_k127_7647263_1 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 8.859e-283 877.0
PJD1_k127_7647263_2 Ammonium Transporter Family K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 506.0
PJD1_k127_7647263_3 Nitrogen regulatory protein P-II K04751,K04752 - - 0.000000000000000000000000000000000000000000000000004199 184.0
PJD1_k127_7647263_4 Evidence 2b Function of strongly homologous gene K02584,K12266,K15836,K21009 - - 0.000003578 49.0
PJD1_k127_7647263_5 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.0008 48.0
PJD1_k127_7698037_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 4.041e-317 977.0
PJD1_k127_7698037_1 glutamate dehydrogenase [NAD(P)+] activity K00261,K00262 - 1.4.1.3,1.4.1.4 1.37e-225 707.0
PJD1_k127_7698037_10 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA K07442 - 2.1.1.219,2.1.1.220 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 469.0
PJD1_k127_7698037_11 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 437.0
PJD1_k127_7698037_12 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 430.0
PJD1_k127_7698037_13 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 385.0
PJD1_k127_7698037_14 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 372.0
PJD1_k127_7698037_15 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 302.0
PJD1_k127_7698037_16 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002583 275.0
PJD1_k127_7698037_18 lipoyl(octanoyl) transferase activity K03644,K03801 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0016874,GO:0016879,GO:0016979,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0019752,GO:0032787,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048519,GO:0050789,GO:0051186,GO:0051188,GO:0051604,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.3.1.181,2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000001213 249.0
PJD1_k127_7698037_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 2.15e-203 642.0
PJD1_k127_7698037_20 bacterial (prokaryotic) histone like domain K05788 - - 0.000000000000000000000000000000000000000000000009791 174.0
PJD1_k127_7698037_21 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000005248 131.0
PJD1_k127_7698037_3 NeuB family K03856 - 2.5.1.54 3.381e-195 613.0
PJD1_k127_7698037_4 Chorismate mutase type II K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004562 607.0
PJD1_k127_7698037_5 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006463 568.0
PJD1_k127_7698037_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008712 552.0
PJD1_k127_7698037_7 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 549.0
PJD1_k127_7698037_8 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003321 518.0
PJD1_k127_7698037_9 Proto-chlorophyllide reductase 57 kD subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006973 492.0
PJD1_k127_7710359_0 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 423.0
PJD1_k127_7710359_1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006821 310.0
PJD1_k127_7710359_2 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001491 257.0
PJD1_k127_7710359_3 Beta-ketoacyl synthase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000003424 203.0
PJD1_k127_7710359_4 dehydratase - - - 0.00000000000000000000000000000000000214 143.0
PJD1_k127_7898697_0 belongs to the aldehyde dehydrogenase family K00128 GO:0003674,GO:0003824,GO:0004029,GO:0006081,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0044237,GO:0055114,GO:0071704 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 380.0
PJD1_k127_7898697_1 lactoylglutathione lyase activity K08234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 301.0
PJD1_k127_792914_0 transcription factor binding K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 455.0
PJD1_k127_801063_0 dead DEAH box helicase K03727 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019439,GO:0030312,GO:0034641,GO:0034655,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 3.986e-283 881.0
PJD1_k127_801063_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 4.252e-217 682.0
PJD1_k127_801063_2 dead DEAH box helicase K03727 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019439,GO:0030312,GO:0034641,GO:0034655,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054 533.0
PJD1_k127_801063_3 Outer membrane protease K01355,K08477,K08566,K13520 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009279,GO:0016020,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031975,GO:0043170,GO:0044238,GO:0044425,GO:0044462,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 3.4.23.48,3.4.23.49 0.00000000000000000000000000000000000000000000000000000000000000000000872 246.0
PJD1_k127_801063_4 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000001422 148.0
PJD1_k127_801671_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 4.783e-294 916.0
PJD1_k127_801671_1 Associated with various cellular activities K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004967 471.0
PJD1_k127_801671_2 Glycine-zipper domain - - - 0.0000000000000000000000000000000000005578 144.0
PJD1_k127_801671_3 DUF167 K09131 - - 0.000000000000000000000000004171 115.0
PJD1_k127_804905_0 Protein of unknown function, DUF255 K06888 - - 2.567e-204 657.0
PJD1_k127_804905_1 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 512.0
PJD1_k127_804905_2 PFAM NapC NirT cytochrome c K02569 - - 0.000000000000000000000000000000000000000009483 161.0
PJD1_k127_816055_0 Belongs to the RtcB family K14415 - 6.5.1.3 9.48e-229 716.0
PJD1_k127_816055_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 446.0
PJD1_k127_816055_10 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000005284 124.0
PJD1_k127_816055_2 saccharopine dehydrogenase activity K03340 - 1.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000943 371.0
PJD1_k127_816055_3 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 321.0
PJD1_k127_816055_4 Hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000005076 241.0
PJD1_k127_816055_5 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000005804 198.0
PJD1_k127_816055_6 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.000000000000000000000000000000000000000000000000001614 183.0
PJD1_k127_816055_9 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000002174 136.0
PJD1_k127_819622_0 Conserved region in glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2734.0
PJD1_k127_819622_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 1.887e-293 903.0
PJD1_k127_819622_2 Polyprenyl synthetase K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004707 499.0
PJD1_k127_819622_3 Domain of unknown function (DUF4258) - - - 0.0000000000000000000000000000000000000001185 152.0
PJD1_k127_819622_4 - - - - 0.0000000000000000000000000000000000003712 141.0
PJD1_k127_819622_5 TIGRFAM YgiT-type zinc finger domain - - - 0.00000000000000000000005944 99.0
PJD1_k127_819622_6 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 0.0000001449 55.0
PJD1_k127_819622_7 - - - - 0.000001686 51.0
PJD1_k127_824977_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 348.0
PJD1_k127_833155_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 493.0
PJD1_k127_833155_1 transposase activity K07483,K07497 - - 0.00000000000000000000000000000000000000000000000009969 179.0
PJD1_k127_833155_2 transposase activity K07483,K07497 - - 0.00000000000000000000000003893 111.0
PJD1_k127_833155_3 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.00000000009534 65.0
PJD1_k127_840734_0 radical SAM domain protein - - - 1.367e-291 913.0
PJD1_k127_840734_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000002823 215.0
PJD1_k127_840734_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K20974 - 2.7.13.3 0.00000000000000000000000000000000000000000000000003864 193.0
PJD1_k127_840734_3 Flagellar basal body rod FlgEFG protein C-terminal K02388 - - 0.00000000000000000000003057 103.0
PJD1_k127_875807_0 amine oxidase K00276 - 1.4.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 597.0
PJD1_k127_875807_1 Phage tail sheath protein subtilisin-like domain K06907 - - 0.0000000000000000003272 91.0
PJD1_k127_876826_0 PFAM metal-dependent phosphohydrolase, HD sub domain K01524,K07012 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 409.0
PJD1_k127_876826_2 bis(5'-adenosyl)-triphosphatase activity - - - 0.00000000000000000000000000000000000000000000000000000004472 199.0
PJD1_k127_876826_3 Evidence 5 No homology to any previously reported sequences K02450,K07126 - - 0.0000000000000000000000000000000000000000000004452 178.0
PJD1_k127_879420_0 proline dipeptidase activity K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 558.0
PJD1_k127_879420_1 Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009525 353.0
PJD1_k127_880270_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1108.0
PJD1_k127_880270_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 2.324e-219 684.0
PJD1_k127_880270_2 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 416.0
PJD1_k127_880270_3 BrnA antitoxin of type II toxin-antitoxin system - - - 0.0000000003577 60.0
PJD1_k127_880638_0 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 581.0
PJD1_k127_880638_1 Alpha/beta hydrolase family K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000976 345.0
PJD1_k127_880638_2 thiolester hydrolase activity K06889,K07000 - - 0.000000000000000000000000000000000000000008458 155.0
PJD1_k127_91401_0 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001901 243.0
PJD1_k127_91401_1 transposase and inactivated derivatives, IS30 family - - - 0.000000000000000000000000000000001169 131.0
PJD1_k127_91401_2 - - - - 0.0000000000000000000002858 98.0
PJD1_k127_91401_4 - - - - 0.0000000000000000000929 94.0
PJD1_k127_91401_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00371,K16965,K17048,K17051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.5.1 0.000000000000000002952 83.0
PJD1_k127_930337_0 thiosulfate sulfurtransferase activity K01011,K21028 - 2.8.1.1,2.8.1.11,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 475.0
PJD1_k127_930337_1 Carbon-nitrogen hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 415.0
PJD1_k127_930337_2 ribonucleoside-diphosphate reductase activity K07735 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 319.0
PJD1_k127_930337_3 Small metal-binding protein - - - 0.0000000000000000003711 92.0
PJD1_k127_930337_4 denitrification pathway - - - 0.000000000004794 68.0
PJD1_k127_930337_5 Peptidoglycan-synthase activator LpoB - - - 0.00006296 55.0
PJD1_k127_935223_0 cobalamin binding K21089,K21972,K22491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 448.0
PJD1_k127_935223_1 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit C K10946 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008768 375.0
PJD1_k127_935223_2 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000002079 169.0
PJD1_k127_940588_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1049.0
PJD1_k127_940588_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0 1030.0
PJD1_k127_940588_10 Fructose-1-6-bisphosphatase, N-terminal domain K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008392 372.0
PJD1_k127_940588_11 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008568 339.0
PJD1_k127_940588_12 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 - 2.7.7.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 314.0
PJD1_k127_940588_13 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005112 276.0
PJD1_k127_940588_14 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000009106 262.0
PJD1_k127_940588_15 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003241 264.0
PJD1_k127_940588_16 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000000000000000000000005853 239.0
PJD1_k127_940588_17 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000001214 241.0
PJD1_k127_940588_18 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000008758 215.0
PJD1_k127_940588_19 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000000000000000000000000000009268 159.0
PJD1_k127_940588_2 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 1.328e-231 725.0
PJD1_k127_940588_20 SpoVT / AbrB like domain K07172 - - 0.00000000000000004417 84.0
PJD1_k127_940588_3 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 2.863e-229 719.0
PJD1_k127_940588_4 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 8.604e-228 713.0
PJD1_k127_940588_5 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 559.0
PJD1_k127_940588_6 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 530.0
PJD1_k127_940588_7 DAHP synthetase I family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 474.0
PJD1_k127_940588_8 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 391.0
PJD1_k127_940588_9 SIS domain K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005442 392.0
PJD1_k127_947372_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K20444 - - 0.0 1583.0
PJD1_k127_947372_1 - - - - 1.217e-215 687.0
PJD1_k127_948860_0 DDE superfamily endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 531.0
PJD1_k127_948860_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002909 231.0
PJD1_k127_948860_3 DNA topological change - - - 0.0000000000000000005717 91.0
PJD1_k127_94907_0 PhoQ Sensor - - - 4.385e-212 686.0
PJD1_k127_94907_1 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 297.0
PJD1_k127_94907_2 protein histidine kinase activity K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000006438 250.0
PJD1_k127_94907_3 PFAM S23 ribosomal protein - - - 0.0000000000000000000000000000004748 127.0
PJD1_k127_95814_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 531.0
PJD1_k127_95814_1 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K02040 - - 0.000000000000000373 80.0
PJD1_k127_95814_2 Universal stress protein family - - - 0.00000001634 57.0
PJD1_k127_975928_0 amine oxidase K00276 - 1.4.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 344.0
PJD1_k127_975928_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003026 263.0
PJD1_k127_975928_2 Homeodomain-like domain K18996 - - 0.0000000000000000000000000000000000000000000000000000000000000003886 231.0
PJD1_k127_975928_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07323 - - 0.00000000000000000000000000000000000000001866 161.0
PJD1_k127_975928_7 Winged helix-turn helix K18996 - - 0.0001589 49.0
PJD1_k127_975928_8 HrpZ - - - 0.0002146 48.0