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Overview

ID MAG02886
Name PJD1_bin.58
Sample SMP0067
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Chitinophagales
Family Chitinophagaceae
Genus JJ008
Species
Assembly information
Completeness (%) 70.53
Contamination (%) 2.62
GC content (%) 46.0
N50 (bp) 2,747
Genome size (bp) 2,174,800

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2384

Gene name Description KEGG GOs EC E-value Score Sequence
PJD1_k127_1007546_0 HemY domain protein - - - 0.0000000000000000000000000000000000000000000000002352 202.0
PJD1_k127_1007546_2 PFAM Proprotein convertase P-domain - - - 0.0000000000000000000006156 113.0
PJD1_k127_1007662_0 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009117 415.0
PJD1_k127_1007889_0 Phosphoribosyl transferase domain K07100 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 308.0
PJD1_k127_1007889_1 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006552 265.0
PJD1_k127_1007889_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000004603 88.0
PJD1_k127_1009865_0 Legume lectin domain - - - 0.000000000000000000000000000000000415 135.0
PJD1_k127_1014528_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1287.0
PJD1_k127_1014528_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000003805 164.0
PJD1_k127_1024293_0 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002012 293.0
PJD1_k127_1024293_1 Bacterial membrane protein YfhO - - - 0.000000000000000000000000002801 113.0
PJD1_k127_1028660_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001557 267.0
PJD1_k127_1028660_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005784 260.0
PJD1_k127_1028660_2 PFAM OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000008288 218.0
PJD1_k127_1028660_3 Protein of unknown function (DUF2851) - - - 0.0000000000000000000146 93.0
PJD1_k127_1033871_0 TonB-dependent Receptor Plug K21573 - - 1.493e-315 988.0
PJD1_k127_1033871_1 RagB SusD domain protein K21572 - - 1.219e-212 672.0
PJD1_k127_1033871_2 SusE outer membrane protein K21571 - - 0.000000000000000000000000000000000000001506 156.0
PJD1_k127_1045028_0 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 301.0
PJD1_k127_1045028_1 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000000000000000000075 217.0
PJD1_k127_1058783_0 PFAM Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000000000000002328 182.0
PJD1_k127_1059554_0 Catalase K03781 - 1.11.1.6 9.475e-201 628.0
PJD1_k127_1066690_0 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 478.0
PJD1_k127_1076788_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005452 526.0
PJD1_k127_1076788_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.0000000000000000000000000000000000004618 140.0
PJD1_k127_1076788_3 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000002589 120.0
PJD1_k127_1085963_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 406.0
PJD1_k127_1085963_1 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000000000000000000003652 185.0
PJD1_k127_1085963_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000005144 93.0
PJD1_k127_1087387_0 PFAM NAD dependent epimerase dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003821 346.0
PJD1_k127_1087387_1 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 304.0
PJD1_k127_1087387_2 Histidine kinase - - - 0.00000000000000000000000000000001957 130.0
PJD1_k127_1092934_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1067.0
PJD1_k127_1092934_1 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 2.444e-253 782.0
PJD1_k127_1126614_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 531.0
PJD1_k127_1126614_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 373.0
PJD1_k127_1126614_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001335 288.0
PJD1_k127_1126614_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.000000000000000000000000000000000000000000000000000007759 196.0
PJD1_k127_1126614_4 Tetratricopeptide repeat - - - 0.00000000000000000004049 99.0
PJD1_k127_1126614_5 surface antigen - - - 0.0003554 54.0
PJD1_k127_1135716_0 DNA helicase K03657 - 3.6.4.12 4.884e-272 844.0
PJD1_k127_1135716_1 Histidine kinase - - - 0.000003978 59.0
PJD1_k127_1136741_0 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 379.0
PJD1_k127_1136741_1 Cupin 2, conserved barrel - - - 0.000000000000000006538 83.0
PJD1_k127_1144264_0 FAD-dependent dehydrogenase K07137 - - 6.747e-223 702.0
PJD1_k127_1144264_1 5'-nucleotidase K01081 - 3.1.3.5 0.00000000000000000000005705 103.0
PJD1_k127_1152663_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2024.0
PJD1_k127_115284_0 PFAM Penicillin binding protein transpeptidase domain K05366 - 2.4.1.129,3.4.16.4 1.926e-305 947.0
PJD1_k127_115284_1 Tetratricopeptide repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006229 405.0
PJD1_k127_115400_0 Thioredoxin reductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 562.0
PJD1_k127_115400_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 526.0
PJD1_k127_115400_2 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000125 101.0
PJD1_k127_115490_0 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008694 250.0
PJD1_k127_115490_1 Uncharacterized protein conserved in bacteria (DUF2200) - - - 0.0000000000000000000000000000000000000000000000000000000001215 206.0
PJD1_k127_115490_2 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000000001163 166.0
PJD1_k127_115490_3 NADPH:quinone reductase activity - - - 0.00000000000000000000000000000000000000000001499 168.0
PJD1_k127_115490_4 - - - - 0.000000000000003806 80.0
PJD1_k127_1161961_0 EcsC protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005527 320.0
PJD1_k127_1161961_1 - - - - 0.00000000000000000000000000000000000000000000000000002667 190.0
PJD1_k127_1171541_0 seryl-tRNA synthetase K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 358.0
PJD1_k127_1171541_1 - - - - 0.0000000000000000000000000000000000000000000000000000001506 197.0
PJD1_k127_1171541_2 Peptidyl-prolyl cis-trans isomerase K03768 - 5.2.1.8 0.00000000000000000000003748 101.0
PJD1_k127_1173410_0 PFAM Shikimate dehydrogenase substrate binding K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007851 274.0
PJD1_k127_1173410_1 Thioesterase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000005036 188.0
PJD1_k127_118385_0 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000000000005163 205.0
PJD1_k127_118385_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000002258 169.0
PJD1_k127_1188876_1 Beta-lactamase class C and other penicillin binding K01286 - 3.4.16.4 0.00000000000000000000000000000000001417 140.0
PJD1_k127_1188876_2 Hemerythrin HHE cation binding K07322 - - 0.00000000002488 70.0
PJD1_k127_1188876_3 glyoxalase III activity - - - 0.0000005211 57.0
PJD1_k127_1193669_0 COGs COG0491 Zn-dependent hydrolase including glyoxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 590.0
PJD1_k127_1193669_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000006691 65.0
PJD1_k127_1196926_0 Quinol cytochrome c oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 582.0
PJD1_k127_1196926_1 cytochrome C - - - 0.00000000000000000000000000000000000000000000000000000000004098 209.0
PJD1_k127_1206220_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 543.0
PJD1_k127_1206220_1 PFAM Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 456.0
PJD1_k127_1206220_2 TonB-dependent receptor - - - 0.000000000000000000000000009142 110.0
PJD1_k127_1211325_0 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 477.0
PJD1_k127_1211325_1 Zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 386.0
PJD1_k127_1211325_2 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 332.0
PJD1_k127_122413_0 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004163 446.0
PJD1_k127_122413_1 protein histidine kinase activity - - - 0.000000000000000000000000000003472 127.0
PJD1_k127_1224915_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0 1298.0
PJD1_k127_1224915_1 Belongs to the GarS family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 358.0
PJD1_k127_1224915_2 protein conserved in bacteria (DUF2179) - - - 0.0009687 42.0
PJD1_k127_1242972_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 4.988e-246 766.0
PJD1_k127_1242972_1 Major Facilitator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 351.0
PJD1_k127_1242972_2 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000001373 135.0
PJD1_k127_1244384_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 513.0
PJD1_k127_1244384_1 protein conserved in bacteria (DUF2329) - - - 0.00000000000000000000000000000000000000000004116 161.0
PJD1_k127_1245298_0 Motility related/secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 487.0
PJD1_k127_1264646_0 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 549.0
PJD1_k127_1264646_1 sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 329.0
PJD1_k127_127628_0 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 514.0
PJD1_k127_127628_1 Sporulation related domain - - - 0.00000000000000000000000000000000000000000008038 164.0
PJD1_k127_127628_2 Belongs to the aldehyde dehydrogenase family K22187 - - 0.00000000000000000000000000000005821 127.0
PJD1_k127_12836_0 Required for chromosome condensation and partitioning K03529 - - 2.057e-236 740.0
PJD1_k127_12836_1 Alkyl hydroperoxide reductase - - - 0.00004682 47.0
PJD1_k127_1283825_1 Protein of unknown function (DUF1624) - - - 0.0000000000000000000002519 96.0
PJD1_k127_1283825_2 META domain - - - 0.0000000000002731 76.0
PJD1_k127_1293643_0 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005135 364.0
PJD1_k127_1293643_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000002056 201.0
PJD1_k127_1293749_0 Beta-lactamase class C and other penicillin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006003 504.0
PJD1_k127_129395_0 Protein of unknown function (DUF1624) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006817 345.0
PJD1_k127_129395_1 PFAM Transcription antitermination protein, NusG, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000003287 209.0
PJD1_k127_129395_2 COG1596 Periplasmic protein involved in polysaccharide export K01991 - - 0.0000000000000000000000000000000000000000000000000000000002183 211.0
PJD1_k127_129395_3 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000009719 166.0
PJD1_k127_129395_4 protein involved in exopolysaccharide biosynthesis - - - 0.0000002101 55.0
PJD1_k127_1296524_0 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000001083 218.0
PJD1_k127_1296524_1 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000005212 183.0
PJD1_k127_1296524_2 PFAM Methyltransferase type - - - 0.000000000003997 70.0
PJD1_k127_1299774_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 405.0
PJD1_k127_1299774_1 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000005866 222.0
PJD1_k127_1299774_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000005539 52.0
PJD1_k127_1299774_3 Biopolymer transport protein ExbD TolR K03559 - - 0.00001102 49.0
PJD1_k127_1304917_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 350.0
PJD1_k127_1304917_1 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000006944 124.0
PJD1_k127_1304917_2 Wd-40 repeat - - - 0.0009616 50.0
PJD1_k127_1307316_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 4.178e-198 627.0
PJD1_k127_1307316_1 Peptidase family C25 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000724 404.0
PJD1_k127_1307316_2 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 354.0
PJD1_k127_1307316_3 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000004289 203.0
PJD1_k127_1321265_0 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 511.0
PJD1_k127_1321265_1 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000688 330.0
PJD1_k127_1321265_2 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000001264 206.0
PJD1_k127_1321265_3 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000003499 192.0
PJD1_k127_1334841_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K00615 - 2.2.1.1 1.756e-256 799.0
PJD1_k127_1334841_1 Phenazine biosynthesis-like protein - - - 0.000001333 49.0
PJD1_k127_1335952_0 Catalyzes the conversion of dihydroorotate to orotate K00226,K17723 - 1.3.1.1,1.3.98.1 8.581e-256 790.0
PJD1_k127_1335952_1 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001153 238.0
PJD1_k127_1335952_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266,K17722 - 1.3.1.1,1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000003327 142.0
PJD1_k127_1350473_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.0 1181.0
PJD1_k127_1350473_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009389 541.0
PJD1_k127_1350473_2 Belongs to the DegT DnrJ EryC1 family K07806,K21337 - 2.6.1.87 0.00000000000000000000000000000000000000000000000000000000000000001272 231.0
PJD1_k127_1350473_3 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000007366 209.0
PJD1_k127_1350623_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 553.0
PJD1_k127_1351486_0 Cystathionine beta-synthase K01697 - 4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 458.0
PJD1_k127_1351486_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000001751 240.0
PJD1_k127_1351486_2 - - - - 0.00000000000000000000000000000000000000008154 157.0
PJD1_k127_1351486_3 - - - - 0.00000000000000000000000001325 115.0
PJD1_k127_1351486_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000008265 105.0
PJD1_k127_1354122_0 PFAM Glycoside hydrolase 97 K01187,K21574 - 3.2.1.20,3.2.1.3 5.926e-289 903.0
PJD1_k127_1354122_1 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 407.0
PJD1_k127_1354122_2 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006069 389.0
PJD1_k127_1354122_3 PQ loop repeat K15383 - - 0.000000000000000000000001634 104.0
PJD1_k127_1354122_4 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.00000000000001356 75.0
PJD1_k127_1355295_0 hemolysin activation secretion protein - - - 4.538e-316 989.0
PJD1_k127_1355335_0 COG2366 Protein related to penicillin acylase K01434 - 3.5.1.11 6.569e-252 791.0
PJD1_k127_1355335_1 - - - - 0.0000000000000000000000000000009574 124.0
PJD1_k127_1355566_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 2.321e-288 893.0
PJD1_k127_1355566_1 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009932 472.0
PJD1_k127_1355566_2 Nlp p60 protein K13694,K13695 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000001673 197.0
PJD1_k127_1356024_0 COG0604 NADPH quinone reductase and related Zn-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006603 248.0
PJD1_k127_1356024_1 Transcriptional regulator, AraC family - - - 0.00000000000000000000002426 99.0
PJD1_k127_1356024_2 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000002227 83.0
PJD1_k127_1356024_3 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000001123 74.0
PJD1_k127_137197_0 PFAM sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 497.0
PJD1_k127_137197_1 amidohydrolase K20810 - 3.5.4.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 385.0
PJD1_k127_137197_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000002748 225.0
PJD1_k127_1374177_0 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007895 284.0
PJD1_k127_1374177_1 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000001423 224.0
PJD1_k127_1374177_2 Oligoendopeptidase F K08602 - - 0.0000000000000000000000000000000000000002824 150.0
PJD1_k127_1389595_0 OmpA MotB domain protein K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 601.0
PJD1_k127_1389595_1 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 455.0
PJD1_k127_1389595_2 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 399.0
PJD1_k127_1389595_3 outer membrane assembly lipoprotein YfiO K05807 - - 0.00000000000000000000000000000000000000000000000000002249 191.0
PJD1_k127_1392564_0 serine-type exopeptidase activity K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 503.0
PJD1_k127_1392564_1 NAD dependent epimerase dehydratase family protein - - - 0.0000007245 51.0
PJD1_k127_1398593_0 PFAM Peptidase M1 membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 354.0
PJD1_k127_1411444_0 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 8.426e-277 864.0
PJD1_k127_1411444_1 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 581.0
PJD1_k127_1414646_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000006641 262.0
PJD1_k127_1414646_1 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000003212 199.0
PJD1_k127_1414646_2 TPM domain - - - 0.0000000000000000000000000000000000000000000006771 169.0
PJD1_k127_1414646_3 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.00000000000000000001282 93.0
PJD1_k127_1417822_0 phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008653 449.0
PJD1_k127_1417822_1 COGs COG1392 Phosphate transport regulator (distant homolog of PhoU) K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000688 330.0
PJD1_k127_1417822_2 phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008753 310.0
PJD1_k127_1434767_0 Sortilin, neurotensin receptor 3, - - - 5.347e-264 828.0
PJD1_k127_1434767_1 Peptidase S46 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003783 263.0
PJD1_k127_1443187_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 8.023e-319 985.0
PJD1_k127_1449353_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266,K17722 - 1.3.1.1,1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 539.0
PJD1_k127_1449353_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431,K12251 - 3.5.1.53,3.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009196 491.0
PJD1_k127_147058_0 Alpha-amylase domain K21575 - 3.2.1.135 4.597e-279 869.0
PJD1_k127_147058_1 Pfam Family of - - - 0.000000000000000000000000000000000000000000000000000000000000002564 221.0
PJD1_k127_147058_2 - - - - 0.00000000000000000000000000000000153 134.0
PJD1_k127_1481569_0 Deoxycytidine triphosphate deaminase K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 350.0
PJD1_k127_1481569_1 Belongs to the P-Pant transferase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004125 248.0
PJD1_k127_1481569_2 Protein of unknown function (DUF3810) - - - 0.0000000000000000000000000000000003844 133.0
PJD1_k127_1481569_3 Protein of unknown function (DUF3810) - - - 0.0000000000000000001167 90.0
PJD1_k127_1481569_4 Uncharacterized protein conserved in bacteria (DUF2130) - - - 0.000000000003955 68.0
PJD1_k127_149039_0 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 412.0
PJD1_k127_149039_1 membrane protein (DUF2306) - - - 0.0000000000000000000000000000000000000000000000000000000000000000009469 235.0
PJD1_k127_149039_2 protein kinase activity - - - 0.0000000000005358 75.0
PJD1_k127_1500643_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 401.0
PJD1_k127_1500643_1 oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 388.0
PJD1_k127_1500643_2 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000534 261.0
PJD1_k127_1500643_3 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000003735 233.0
PJD1_k127_1500643_4 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.00000000000000000000000000000000000000000000000001683 182.0
PJD1_k127_1505026_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008447 479.0
PJD1_k127_1505026_1 Belongs to the arginase family K01479 - 3.5.3.8 0.000000000000000000000000000000000000000000003279 168.0
PJD1_k127_1509078_0 Endonuclease exonuclease phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 359.0
PJD1_k127_1509078_1 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000002544 88.0
PJD1_k127_1509638_0 GH3 auxin-responsive promoter - - - 6.339e-219 684.0
PJD1_k127_1513906_0 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 508.0
PJD1_k127_1513906_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 336.0
PJD1_k127_1513906_2 SdiA-regulated - - - 0.000000000000000000000000000000000000000000008512 173.0
PJD1_k127_1513906_3 Acid phosphatase homologues K19302 - 3.6.1.27 0.0000000000000000000000000000000000006585 145.0
PJD1_k127_1518061_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 480.0
PJD1_k127_1518061_1 PFAM GumN - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 464.0
PJD1_k127_1529846_0 PFAM Integral membrane protein DUF95 - - - 0.00000000000000000000000000000000000000000000000000000000000000008018 228.0
PJD1_k127_1529846_1 pfam rdd - - - 0.0000000000000000000000000000000000000000000000002579 184.0
PJD1_k127_1532759_0 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005709 531.0
PJD1_k127_1532759_1 uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000003749 240.0
PJD1_k127_1532759_2 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000006801 116.0
PJD1_k127_1537081_0 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 595.0
PJD1_k127_1537081_1 Alpha amylase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 563.0
PJD1_k127_1537081_2 COGs COG0058 Glucan phosphorylase K00688,K00691 - 2.4.1.1,2.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009258 338.0
PJD1_k127_1541312_0 TonB dependent receptor K16089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008187 449.0
PJD1_k127_1571225_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.498e-243 757.0
PJD1_k127_1571225_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 328.0
PJD1_k127_1571225_2 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 333.0
PJD1_k127_1571225_3 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000001643 214.0
PJD1_k127_1571225_4 Gaf domain - - - 0.0000000000000000000000000000000000000008878 160.0
PJD1_k127_1571225_5 - - - - 0.00000000000000000002984 92.0
PJD1_k127_1571225_6 Septum formation initiator - - - 0.0000000000000000003326 90.0
PJD1_k127_1577881_0 Multidrug transporter MatE K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 439.0
PJD1_k127_1577881_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004744 366.0
PJD1_k127_1577881_2 COGs COG1914 Mn2 and Fe2 transporter of the NRAMP family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003302 246.0
PJD1_k127_1577881_3 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000001459 223.0
PJD1_k127_1585029_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 482.0
PJD1_k127_1585029_1 PFAM Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 340.0
PJD1_k127_1585029_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000008948 215.0
PJD1_k127_1585029_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000001252 95.0
PJD1_k127_1585029_4 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000002479 57.0
PJD1_k127_1585187_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 3.695e-220 687.0
PJD1_k127_1585187_1 Acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 374.0
PJD1_k127_1585187_2 Uroporphyrin-iii c tetrapyrrole (Corrin porphyrin) methyltransferase K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 314.0
PJD1_k127_1585187_3 - - - - 0.000000000000000000000000000000000000000000004301 167.0
PJD1_k127_1585187_4 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000001502 130.0
PJD1_k127_1585187_5 Etoposide-induced protein 2.4 (EI24) K06203 - - 0.00000000000000000000783 93.0
PJD1_k127_159780_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 2.556e-293 915.0
PJD1_k127_159780_1 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 400.0
PJD1_k127_159780_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000003188 239.0
PJD1_k127_159780_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000001553 218.0
PJD1_k127_159780_4 - - - - 0.0000000000000000000000000000006863 127.0
PJD1_k127_1603084_0 TamB, inner membrane protein subunit of TAM complex - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008557 304.0
PJD1_k127_1605223_0 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009251 277.0
PJD1_k127_1605223_1 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000001206 157.0
PJD1_k127_161008_0 Sugar nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 395.0
PJD1_k127_161345_0 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 330.0
PJD1_k127_161345_1 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000001925 128.0
PJD1_k127_161345_2 ABC transporter K15738 - - 0.000000000000006312 75.0
PJD1_k127_1614096_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 437.0
PJD1_k127_1614096_1 - - - - 0.000000000193 66.0
PJD1_k127_161700_0 PFAM Uncharacterised protein family UPF0029, Impact, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001751 260.0
PJD1_k127_161700_1 CHAD domain - - - 0.0001325 51.0
PJD1_k127_1621970_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 1.491e-194 611.0
PJD1_k127_1621970_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008827 478.0
PJD1_k127_1621970_2 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000284 285.0
PJD1_k127_1621970_3 Putative FMN-binding domain K07734 - - 0.000000000000000000000000000000000000000000000000000000000006547 214.0
PJD1_k127_1624422_0 COGs COG0389 Nucleotidyltransferase DNA polymerase involved in DNA repair K03502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 501.0
PJD1_k127_1624422_1 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000452 228.0
PJD1_k127_1624422_2 Belongs to the peptidase S24 family K03503 - - 0.0000000000000000000000000000000000000000000000000000000005887 204.0
PJD1_k127_1628873_0 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 438.0
PJD1_k127_1628873_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001382 258.0
PJD1_k127_1628873_2 PFAM Metal-dependent phosphohydrolase, HD - - - 0.000000000000000000002447 102.0
PJD1_k127_1630210_0 Phospholipase D. Active site motifs. K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006554 343.0
PJD1_k127_1630210_1 - - - - 0.000000000000006584 81.0
PJD1_k127_1630210_2 - - - - 0.00000000000001593 75.0
PJD1_k127_1636577_0 POT family K03305 - - 4.178e-242 758.0
PJD1_k127_1636577_1 POT family K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 362.0
PJD1_k127_1636577_2 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 309.0
PJD1_k127_1639992_0 Oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 437.0
PJD1_k127_1639992_1 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 400.0
PJD1_k127_1639992_2 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 316.0
PJD1_k127_1639992_3 methyltransferase - - - 0.00000000000000000000000000000000000000000000277 173.0
PJD1_k127_1640039_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 3.005e-295 908.0
PJD1_k127_1640039_1 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 391.0
PJD1_k127_1640039_2 5'-nucleotidase K01081 - 3.1.3.5 0.000000000000000000000000000000000001648 141.0
PJD1_k127_1644368_0 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 379.0
PJD1_k127_1644368_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000002436 90.0
PJD1_k127_1645034_0 Ig-like domain from next to BRCA1 gene - - - 0.000000000000000000000000000000000000000002807 168.0
PJD1_k127_1647830_0 ABC transporter K06147 - - 1.118e-280 872.0
PJD1_k127_1647830_1 Cupin 2, conserved barrel - - - 0.000000000000000000000000000000000000000000000000000003094 194.0
PJD1_k127_1647830_2 DoxX family - - - 0.0000000000000000000000000000000000000000000000000005039 187.0
PJD1_k127_1647830_3 Transcriptional regulator, AraC family - - - 0.0000000000000000000000000000001708 135.0
PJD1_k127_1647830_4 Beta-lactamase class C and other penicillin binding - - - 0.00000000000006237 72.0
PJD1_k127_1647830_5 - - - - 0.000000008217 56.0
PJD1_k127_1654649_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 494.0
PJD1_k127_1656036_0 Permease, YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007219 508.0
PJD1_k127_1671273_0 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000001136 186.0
PJD1_k127_1671273_3 - - - - 0.0001 51.0
PJD1_k127_1672298_0 protein required for cytochrome oxidase assembly K02259 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 437.0
PJD1_k127_1672298_1 Esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 413.0
PJD1_k127_1672298_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000006466 237.0
PJD1_k127_168755_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 294.0
PJD1_k127_168755_1 CRP FNR family K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002978 277.0
PJD1_k127_168989_0 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000005424 228.0
PJD1_k127_168989_1 - - - - 0.000000000000000000000000000000000000000003182 172.0
PJD1_k127_168989_2 - - - - 0.00000000000000000006166 104.0
PJD1_k127_1703031_0 OPT oligopeptide transporter protein - - - 2.964e-224 705.0
PJD1_k127_1703031_1 Protein of unknown function (DUF1501) - - - 2.647e-218 681.0
PJD1_k127_1703031_2 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 602.0
PJD1_k127_1703031_3 Fatty acid desaturase K00496 - 1.14.15.3 0.0000000009158 64.0
PJD1_k127_1727716_0 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 399.0
PJD1_k127_1729413_0 ATPase (AAA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003193 578.0
PJD1_k127_1729413_1 Lipopolysaccharide-assembly - - - 0.0000000000000000000000000000000000000000000001283 173.0
PJD1_k127_1729413_2 - - - - 0.000000000000000000000000000000000000008813 155.0
PJD1_k127_1729413_3 Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000000000007639 127.0
PJD1_k127_1733892_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 593.0
PJD1_k127_1733892_1 Cell division protein - - - 0.000000000000000000000000000000000000000000000000002905 184.0
PJD1_k127_1738324_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 595.0
PJD1_k127_1738324_1 Tetratricopeptide repeat - - - 0.000000000000000000008261 96.0
PJD1_k127_1738324_2 Phosphoglycerate kinase K00927 - 2.7.2.3 0.0000005263 51.0
PJD1_k127_1744911_0 Major Facilitator Superfamily - - - 5.46e-199 627.0
PJD1_k127_1744911_1 Membrane protein involved in D-alanine export - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 503.0
PJD1_k127_1744911_2 TonB-dependent receptor K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 428.0
PJD1_k127_1744911_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000002542 146.0
PJD1_k127_1744911_4 Rhodanese Homology Domain - - - 0.00000000009045 63.0
PJD1_k127_1750557_0 Belongs to the UbiD family K03182 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003185 424.0
PJD1_k127_1750557_1 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000006437 226.0
PJD1_k127_1750557_2 Outer membrane protein beta-barrel domain - - - 0.00000000001151 67.0
PJD1_k127_1757283_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 1.943e-265 824.0
PJD1_k127_1757283_1 KR domain K13775 - - 0.0000000000000000000000000000000000000000000000000000000000000263 216.0
PJD1_k127_1757283_2 Outer membrane protein beta-barrel domain - - - 0.000000000000005914 78.0
PJD1_k127_1772007_0 Fe-S oxidoreductase K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009448 390.0
PJD1_k127_1772007_1 EVE domain - - - 0.0000000000000000000000000000000000367 138.0
PJD1_k127_1772007_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000002964 105.0
PJD1_k127_1774400_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 407.0
PJD1_k127_1774400_1 RNA polymerase - - - 0.0000000000000000000000000000000000000000000000000006348 185.0
PJD1_k127_1774400_2 outer membrane assembly lipoprotein YfiO K05807 - - 0.0000000000000363 75.0
PJD1_k127_1777500_0 Belongs to the HpcH HpaI aldolase family - - - 1.162e-196 617.0
PJD1_k127_1777500_1 Saccharopine dehydrogenase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 446.0
PJD1_k127_1777500_2 ubiE/COQ5 methyltransferase family K15256 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007828 383.0
PJD1_k127_1777500_3 PFAM Scaffold protein Nfu NifU N terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 347.0
PJD1_k127_1777500_4 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007021 339.0
PJD1_k127_1777500_5 ArsC family K00537 - 1.20.4.1 0.0000000000000000000000000000000000000000000000007446 179.0
PJD1_k127_1778742_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004592 452.0
PJD1_k127_1778742_1 Bacterial regulatory proteins, deoR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007919 388.0
PJD1_k127_1781685_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 2.498e-298 925.0
PJD1_k127_1781685_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000002055 78.0
PJD1_k127_1789260_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005736 523.0
PJD1_k127_1789260_1 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 519.0
PJD1_k127_1789260_2 Belongs to the arginase family K01479 - 3.5.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 465.0
PJD1_k127_1789260_3 Oxidoreductase domain protein K16044 - 1.1.1.371 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 426.0
PJD1_k127_1796678_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 4.215e-205 646.0
PJD1_k127_1796678_1 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 564.0
PJD1_k127_1796678_2 single-stranded DNA-binding protein K03111 - - 0.000000000000000000000000000000000000000000000387 168.0
PJD1_k127_179854_0 TonB-dependent Receptor Plug Domain K02014 - - 5.23e-216 685.0
PJD1_k127_179854_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 461.0
PJD1_k127_179854_2 PASTA domain containing protein K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000012 291.0
PJD1_k127_179854_3 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000003625 153.0
PJD1_k127_1805946_0 DinB family - - - 0.00000000000000000000000000000000000000000195 162.0
PJD1_k127_1805946_1 - - - - 0.0000000000000000000000000000000000000007926 156.0
PJD1_k127_1805946_2 PFAM Aminotransferase class I and II K00639 - 2.3.1.29 0.000000000000000000000000000000000046 134.0
PJD1_k127_1831075_0 Belongs to the aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 8.609e-298 919.0
PJD1_k127_1831075_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 563.0
PJD1_k127_1831075_2 Domain of unknown function (DUF3472) - - - 0.00003191 53.0
PJD1_k127_1831075_3 tetratricopeptide repeat K02717 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0008150,GO:0008152,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009987,GO:0015979,GO:0016020,GO:0016043,GO:0019684,GO:0022607,GO:0031976,GO:0031984,GO:0034357,GO:0034622,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0048564,GO:0055035,GO:0065003,GO:0071840 - 0.000402 51.0
PJD1_k127_1832098_0 Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 612.0
PJD1_k127_1832098_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000636 561.0
PJD1_k127_1842978_0 Heat shock 70 kDa protein K04043 - - 0.0 1105.0
PJD1_k127_1842978_1 - - - - 0.00000000000000000000000000000000005071 137.0
PJD1_k127_1843246_0 beta-lactamase - - - 1.616e-241 753.0
PJD1_k127_1843246_1 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 368.0
PJD1_k127_1843246_2 PFAM YeeE YedE family (DUF395) K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 299.0
PJD1_k127_1843246_3 PFAM YeeE YedE family (DUF395) K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004313 290.0
PJD1_k127_1843246_4 Cytochrome C oxidase, cbb3-type, subunit III K19713 - 1.8.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001203 259.0
PJD1_k127_1843246_5 COG0607 Rhodanese-related sulfurtransferase - - - 0.000000000000000000000000001151 115.0
PJD1_k127_1843246_6 Rhodanese Homology Domain - - - 0.00000000000000000000000004584 111.0
PJD1_k127_1843246_7 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000004197 86.0
PJD1_k127_1843246_8 CRP FNR family K01420 - - 0.000001286 50.0
PJD1_k127_1850611_0 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 598.0
PJD1_k127_1853146_0 Esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 393.0
PJD1_k127_1853146_1 Esterase of the alpha-beta hydrolase superfamily - - - 0.000000003015 58.0
PJD1_k127_1859012_0 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005449 444.0
PJD1_k127_1859012_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 407.0
PJD1_k127_1859012_2 Belongs to the metal hydrolase YfiT family - - - 0.00000000000000000000000000000000000000000000000001037 185.0
PJD1_k127_1859012_3 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000004648 108.0
PJD1_k127_1859012_4 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.000000000211 61.0
PJD1_k127_1863316_0 ABC transporter K06147 - - 7.56e-291 902.0
PJD1_k127_1863316_1 Glycosyltransferase family 25 (LPS biosynthesis protein) K07270 - - 0.0000000000000000000000000000000000000000000000004496 183.0
PJD1_k127_1867284_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.275e-229 723.0
PJD1_k127_1867284_1 cellulase activity - - - 0.00000000007831 69.0
PJD1_k127_1880156_0 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005932 264.0
PJD1_k127_1880156_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000004552 169.0
PJD1_k127_188381_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 6.03e-218 686.0
PJD1_k127_188381_1 Rhomboid family K09650 - 3.4.21.105 0.00000000000000000000000000000000000000000000005892 173.0
PJD1_k127_1886401_0 PFAM Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 426.0
PJD1_k127_1886401_1 mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007928 351.0
PJD1_k127_1886401_2 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 288.0
PJD1_k127_1886401_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001898 250.0
PJD1_k127_1886401_4 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000009323 191.0
PJD1_k127_1886401_5 cell redox homeostasis K03671 - - 0.00000000000000000000000000000000001244 143.0
PJD1_k127_189252_0 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009124 273.0
PJD1_k127_189252_1 RNA methyltransferase, RsmD K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000000000000000000004326 237.0
PJD1_k127_189252_2 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000000000003508 203.0
PJD1_k127_1900130_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 7.262e-299 922.0
PJD1_k127_1912733_0 PFAM AhpC TSA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 314.0
PJD1_k127_1912733_1 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000001537 189.0
PJD1_k127_1920323_0 alpha-L-arabinofuranosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 371.0
PJD1_k127_1920323_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008834 321.0
PJD1_k127_1920323_2 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000003813 146.0
PJD1_k127_1922233_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 441.0
PJD1_k127_1925915_0 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 603.0
PJD1_k127_1925915_1 Mitochondrial biogenesis AIM24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 417.0
PJD1_k127_1939028_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 571.0
PJD1_k127_1939028_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000000000000000000000000000000000000000003621 208.0
PJD1_k127_1939423_0 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 363.0
PJD1_k127_1939423_1 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007861 303.0
PJD1_k127_1939423_2 - - - - 0.00000000000000000000000000000000000000000002077 169.0
PJD1_k127_1939423_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000003675 154.0
PJD1_k127_1939423_4 Belongs to the ParB family K03497 - - 0.00000000000000002864 83.0
PJD1_k127_1941824_0 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00632 - 2.3.1.16 7.832e-199 623.0
PJD1_k127_1941824_1 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 538.0
PJD1_k127_1952400_0 Fatty acid desaturase K00496 - 1.14.15.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 329.0
PJD1_k127_1952400_1 Pregnancy-associated plasma protein-A - - - 0.0000000000000000000000000000000000005923 144.0
PJD1_k127_19569_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000751 475.0
PJD1_k127_19569_1 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 394.0
PJD1_k127_19569_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004466 285.0
PJD1_k127_1972509_0 Cytochrome C oxidase subunit I K02274 - 1.9.3.1 1.169e-208 652.0
PJD1_k127_1972509_1 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000328 239.0
PJD1_k127_1984787_0 DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007864 435.0
PJD1_k127_1994799_0 PFAM Cytochrome c assembly protein K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000616 395.0
PJD1_k127_199982_0 homogentisate 12-dioxygenase K00451 - 1.13.11.5 9.548e-216 671.0
PJD1_k127_199982_2 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000000000000000002808 143.0
PJD1_k127_199982_3 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000002057 72.0
PJD1_k127_2036507_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 418.0
PJD1_k127_2037697_0 Penicillin-binding protein 2 K05515 - 3.4.16.4 1.001e-224 716.0
PJD1_k127_2037697_1 Cell shape determining protein MreB Mrl K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008184 593.0
PJD1_k127_2037697_2 shape-determining protein MreC K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004781 267.0
PJD1_k127_2037697_3 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001255 252.0
PJD1_k127_2037697_4 rod shape-determining protein MreD - - - 0.000000000000000000000000000000000000000000000000000000000000000000174 234.0
PJD1_k127_2037697_5 Belongs to the SEDS family K05837 - - 0.00000000000636 66.0
PJD1_k127_2037697_6 Cell shape determining protein MreB Mrl K03569 - - 0.00000000006931 63.0
PJD1_k127_2074298_0 of the RND superfamily K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 348.0
PJD1_k127_2074298_1 Two component regulator propeller domain protein - - - 0.000000000000001327 79.0
PJD1_k127_2076418_0 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 1.501e-303 938.0
PJD1_k127_2076418_1 Uncharacterized conserved protein (DUF2267) - - - 0.0000000000000000000000000000000000000000002051 163.0
PJD1_k127_2076418_2 - - - - 0.00000000000000000000002957 106.0
PJD1_k127_2083584_0 PFAM tRNA synthetases class I (E and Q), catalytic domain K01886 - 6.1.1.18 3.555e-220 687.0
PJD1_k127_2083584_1 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 437.0
PJD1_k127_2085896_0 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000000000000000000000000000000000000000000000000000003989 230.0
PJD1_k127_2085896_1 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000003015 189.0
PJD1_k127_2085896_2 YjbR - - - 0.0000000000000000000000000000000000000000000000001876 178.0
PJD1_k127_2108933_0 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 373.0
PJD1_k127_2108933_1 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000002545 212.0
PJD1_k127_2108933_2 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000008332 160.0
PJD1_k127_2122644_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 4.422e-245 760.0
PJD1_k127_2122644_1 Permease, YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005248 244.0
PJD1_k127_2127986_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 383.0
PJD1_k127_2127986_1 Two component transcriptional regulator, LytTR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000001728 231.0
PJD1_k127_2139294_0 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 355.0
PJD1_k127_2139294_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 298.0
PJD1_k127_2139294_2 PFAM Biopolymer transport protein ExbD TolR - - - 0.000000000000000000000000000000000000000000000000000000000000002669 223.0
PJD1_k127_2139294_3 PFAM Biopolymer transport protein ExbD TolR - - - 0.00000001081 57.0
PJD1_k127_2144886_0 with chaperone activity ATP-binding subunit K03696 - - 0.0 1257.0
PJD1_k127_2144886_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 327.0
PJD1_k127_2144886_2 pectinesterase activity K01224 - 3.2.1.89 0.00000008392 61.0
PJD1_k127_2147960_0 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000008779 231.0
PJD1_k127_2147960_1 protein of Photorhabdus and some similarities with - - - 0.0000000000000000000000000000000000000000000001318 188.0
PJD1_k127_2148045_0 NADP oxidoreductase coenzyme F420-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001282 285.0
PJD1_k127_2148045_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000003426 175.0
PJD1_k127_2152229_0 COGs COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006577 343.0
PJD1_k127_2152229_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009566 332.0
PJD1_k127_2152229_2 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000003318 160.0
PJD1_k127_2159676_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 284.0
PJD1_k127_2159676_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000234 220.0
PJD1_k127_2159676_2 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family K02503 - - 0.00000000000000000000000000000000000000000000000000000003404 199.0
PJD1_k127_217112_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 351.0
PJD1_k127_217112_1 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004956 239.0
PJD1_k127_217112_2 - - - - 0.00000000000000000005277 97.0
PJD1_k127_217112_3 - - - - 0.0000000000005358 75.0
PJD1_k127_217112_4 - - - - 0.000004518 54.0
PJD1_k127_2184010_0 Metallopeptidase family M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 343.0
PJD1_k127_2184010_1 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000001685 173.0
PJD1_k127_2184010_2 Transcriptional regulator, Crp Fnr family - - - 0.00000000000000000000000000000000000753 143.0
PJD1_k127_2184010_3 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.0000000001881 62.0
PJD1_k127_2188623_0 Penicillin-binding Protein K05367 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 503.0
PJD1_k127_2188623_1 Penicillin-binding Protein K05367 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009579 355.0
PJD1_k127_2188623_2 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000000000000000000000000000001893 182.0
PJD1_k127_2188623_3 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000000000000000000000005815 151.0
PJD1_k127_2189338_0 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009899 563.0
PJD1_k127_2189338_1 Protein of unknown function (DUF2911) - - - 0.000000000000000000000009178 102.0
PJD1_k127_2192983_0 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004832 281.0
PJD1_k127_2192983_1 competence protein COMEC - - - 0.000000000000000000000000000000000001525 143.0
PJD1_k127_2213628_0 alanine dehydrogenase K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 349.0
PJD1_k127_2213628_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 322.0
PJD1_k127_2213628_2 ABC transporter K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000000000000001013 251.0
PJD1_k127_2217246_0 F5 8 type C domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000002266 226.0
PJD1_k127_222216_0 alpha-2-macroglobulin domain protein K06894 - - 0.0 1017.0
PJD1_k127_2229920_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 2.916e-261 819.0
PJD1_k127_2229920_1 ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000006424 242.0
PJD1_k127_2229920_2 Bacterial protein of unknown function (DUF853) K06915 - - 0.00000000000261 68.0
PJD1_k127_223012_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 321.0
PJD1_k127_223012_1 PFAM WD domain, G-beta repeat - - - 0.000000000000000000000000000000000158 143.0
PJD1_k127_2230464_0 COGs COG4995 conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 365.0
PJD1_k127_2233518_0 Oligoendopeptidase F K08602 - - 2.728e-244 760.0
PJD1_k127_2233518_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000001381 218.0
PJD1_k127_2233518_2 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000007855 161.0
PJD1_k127_2233518_3 Glyoxalase-like domain K06996 - - 0.0000000000000000000000000000000000000002485 153.0
PJD1_k127_2233518_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000003777 120.0
PJD1_k127_2234220_0 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006191 578.0
PJD1_k127_2234220_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008118 371.0
PJD1_k127_2234220_2 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 284.0
PJD1_k127_2234220_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004064 276.0
PJD1_k127_2234220_4 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000006077 140.0
PJD1_k127_2259738_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 484.0
PJD1_k127_2259738_1 Fibronectin type III domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 374.0
PJD1_k127_2268464_0 glutamine synthetase K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 516.0
PJD1_k127_2268464_1 TIGRFAM Por secretion system C-terminal sorting domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000661 316.0
PJD1_k127_2268464_2 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000001784 156.0
PJD1_k127_2268464_3 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000001586 168.0
PJD1_k127_2270900_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 2.415e-251 780.0
PJD1_k127_2271150_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 2.958e-215 672.0
PJD1_k127_2271150_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000006326 190.0
PJD1_k127_2271150_2 TamB, inner membrane protein subunit of TAM complex - - - 0.00000000000000000000000003573 112.0
PJD1_k127_2276629_0 Domain of unknown function (DUF4442) - - - 0.00000000000000000000000000000000000000000000000000000000000001555 219.0
PJD1_k127_2276629_1 Protein of unknown function, DUF255 - - - 0.00000000000000000000000000000000000000000000000000000000002517 209.0
PJD1_k127_2276629_2 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.000000000000000000000000000000000000000000000000000853 185.0
PJD1_k127_2276629_3 PFAM Papain family cysteine protease - - - 0.000000002946 59.0
PJD1_k127_229475_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 447.0
PJD1_k127_229475_1 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000003704 228.0
PJD1_k127_229475_2 - - - - 0.00000000000000000000000000000000002921 138.0
PJD1_k127_2301256_0 aconitate hydratase K01681 - 4.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 378.0
PJD1_k127_2301256_1 PFAM PspC domain - - - 0.0000000000000000000000000000001782 124.0
PJD1_k127_2301256_2 transcriptional regulator - - - 0.0000000000000000001464 89.0
PJD1_k127_2309592_0 calcium- and calmodulin-responsive adenylate cyclase activity K01406 - 3.4.24.40 0.00000000000000000000000000000000000000000000000000000000000000001837 238.0
PJD1_k127_2309592_1 Mate efflux family protein K03327 - - 0.00000000000000000000000000000000000000000001077 168.0
PJD1_k127_2328959_0 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 305.0
PJD1_k127_2328959_1 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003873 270.0
PJD1_k127_2328959_2 HAD-hyrolase-like K07025 - - 0.000000000001078 69.0
PJD1_k127_2336455_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008498 497.0
PJD1_k127_2336455_1 Male sterility protein K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008133 362.0
PJD1_k127_2336455_3 protein targeting K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.000000000000000003052 91.0
PJD1_k127_2351371_0 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 370.0
PJD1_k127_2351371_1 Serine dehydratase K01752 - 4.3.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 367.0
PJD1_k127_2352507_0 Y_Y_Y domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009341 265.0
PJD1_k127_2352507_1 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000001965 226.0
PJD1_k127_2352507_2 peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000003791 211.0
PJD1_k127_2352507_3 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000009153 179.0
PJD1_k127_2362139_0 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008395 542.0
PJD1_k127_2372079_0 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000005198 265.0
PJD1_k127_2372079_1 2-oxoglutarate translocator - - - 0.000000000000000000000000000000000000000000000000000000000000000000001475 242.0
PJD1_k127_2372079_2 Etoposide-induced protein 2.4 (EI24) K06203 - - 0.000000000000000000000000000000000000000000000000000002878 196.0
PJD1_k127_2375429_0 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.0000000000000000000000000000000000000000000001724 168.0
PJD1_k127_2375429_1 Domain of unknown function (DUF4136) - - - 0.000000000000000000000000000000000000000000004946 169.0
PJD1_k127_2379054_0 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007385 402.0
PJD1_k127_2379054_1 ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 288.0
PJD1_k127_2416257_0 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003304 451.0
PJD1_k127_2416257_1 ABC-type Na efflux pump, permease component K01992 - - 0.000000000000000000000000000000000000000538 154.0
PJD1_k127_2472721_0 CarboxypepD_reg-like domain - - - 2.979e-312 974.0
PJD1_k127_2472721_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 1.347e-229 720.0
PJD1_k127_2472721_2 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.00000000000000000000000000002832 120.0
PJD1_k127_2477768_0 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 540.0
PJD1_k127_2490853_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0 1017.0
PJD1_k127_2490853_1 Domain of unknown function (DUF4954) - - - 3.49e-218 681.0
PJD1_k127_2490853_2 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 574.0
PJD1_k127_2522798_0 Isocitrate isopropylmalate dehydrogenase K00031,K00052 - 1.1.1.42,1.1.1.85 1.244e-275 853.0
PJD1_k127_2522798_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 572.0
PJD1_k127_2522798_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005536 409.0
PJD1_k127_2522798_3 Gliding motility protein, GldB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001952 288.0
PJD1_k127_2522798_4 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000000000000000000000000000000000008078 218.0
PJD1_k127_2522798_5 Translation initiation factor SUI1 K03113 - - 0.00000000000000000000000000000000000002559 145.0
PJD1_k127_2522798_6 - - - - 0.00000003504 59.0
PJD1_k127_2525567_0 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000000000000006579 166.0
PJD1_k127_2525567_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000251 90.0
PJD1_k127_2525567_2 Thermolysin metallopeptidase, catalytic domain K01400 - 3.4.24.28 0.0000002235 59.0
PJD1_k127_2527145_0 Rhs element Vgr protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 394.0
PJD1_k127_2527145_1 PAAR repeat-containing protein - - - 0.000000000000000000000000000000000000002586 147.0
PJD1_k127_2527145_2 Phage baseplate assembly protein W K06903 - - 0.000000000000000000000000000000000004593 141.0
PJD1_k127_2527145_3 homolog of phage Mu protein gp47 - - - 0.00000000000259 71.0
PJD1_k127_2546052_0 COGs COG0488 ATPase components of ABC transporter with duplicated ATPase domains - - - 5.506e-303 937.0
PJD1_k127_2546052_1 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000664 150.0
PJD1_k127_2554130_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007189 423.0
PJD1_k127_2554130_1 PHP domain protein - - - 0.000000000000000000000000000000000000000000000000000003908 209.0
PJD1_k127_2554130_2 cellulase activity - - - 0.0000000000000000000000000000000000000000000000000000141 215.0
PJD1_k127_2554130_3 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000001021 184.0
PJD1_k127_2554130_4 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000008666 112.0
PJD1_k127_2554130_5 Pectinesterase K01051 - 3.1.1.11 0.000000002718 71.0
PJD1_k127_2554130_6 PFAM nucleic acid binding, OB-fold, tRNA - - - 0.000000005568 66.0
PJD1_k127_2560469_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 2.838e-230 717.0
PJD1_k127_2570200_0 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 353.0
PJD1_k127_2570200_1 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 0.000000000000000000000004002 102.0
PJD1_k127_2570200_2 PFAM WD domain, G-beta repeat - - - 0.000000000000000000001591 108.0
PJD1_k127_2575228_0 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008737 357.0
PJD1_k127_2575228_1 Protein of unknown function (DUF3667) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 298.0
PJD1_k127_2575228_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000007052 221.0
PJD1_k127_2575228_3 self proteolysis - - - 0.000000001061 64.0
PJD1_k127_2585814_0 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 492.0
PJD1_k127_2585814_1 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007681 394.0
PJD1_k127_2585814_2 Type IV pilus biogenesis stability protein PilW - - - 0.0000000000000000000000000000000003372 134.0
PJD1_k127_2585814_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000004207 49.0
PJD1_k127_2586889_0 PKD domain containing protein - - - 5.05e-234 751.0
PJD1_k127_2586889_1 apolipoprotein N-acyltransferase K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 430.0
PJD1_k127_2586889_2 Ndr family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009674 281.0
PJD1_k127_2586889_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000001194 226.0
PJD1_k127_2588037_0 Carboxypeptidase regulatory-like domain - - - 9.204e-225 713.0
PJD1_k127_2588037_1 metallopeptidase activity K01448,K07315,K21470 - 3.1.3.3,3.5.1.28 0.00000000000000000000000000000000000000001674 170.0
PJD1_k127_25917_0 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000000000000000000000000000000000000000000000000004495 187.0
PJD1_k127_25917_1 BON domain - - - 0.0001225 49.0
PJD1_k127_2605421_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 407.0
PJD1_k127_2605421_1 PFAM nucleoside H symporter - - - 0.00000000000000000000000000000000000716 138.0
PJD1_k127_2610566_0 Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 577.0
PJD1_k127_2610566_1 PFAM Allophanate hydrolase subunit 1 K06351 - - 0.00000000000000000000000000000000000000000000000000000000000000000002742 239.0
PJD1_k127_2610566_2 DinB family - - - 0.00000000000000000000000000000000001952 139.0
PJD1_k127_2610566_3 PFAM Allophanate hydrolase subunit 2 K06350 - - 0.00001088 51.0
PJD1_k127_262362_0 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 368.0
PJD1_k127_262362_1 - - - - 0.0000000000000000000000000000000000000000000000000000001937 201.0
PJD1_k127_262362_2 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.00000000000000000000000000000000006782 139.0
PJD1_k127_262362_3 Cytochrome C oxidase, cbb3-type, subunit III K02305 - - 0.00000000000000000000000007575 110.0
PJD1_k127_2626425_0 PFAM Glycosyl transferase family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000474 233.0
PJD1_k127_2629587_0 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P) K00849 - 2.7.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 415.0
PJD1_k127_2629587_1 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0000000000001772 72.0
PJD1_k127_2631070_0 TamB, inner membrane protein subunit of TAM complex - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 618.0
PJD1_k127_2637553_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002745 290.0
PJD1_k127_2637553_1 CAAX protease self-immunity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002957 251.0
PJD1_k127_2637553_2 Smr domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002871 235.0
PJD1_k127_2637553_3 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000001822 166.0
PJD1_k127_2655164_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 368.0
PJD1_k127_2655164_1 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000005773 225.0
PJD1_k127_2655164_2 methyltransferase - - - 0.0000000000000000542 89.0
PJD1_k127_2655164_3 DoxX family - - - 0.00000007087 61.0
PJD1_k127_2655465_0 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1160.0
PJD1_k127_2655465_1 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003535 343.0
PJD1_k127_2655465_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 312.0
PJD1_k127_2655465_3 succinate dehydrogenase K00241 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 293.0
PJD1_k127_2655465_4 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000001127 190.0
PJD1_k127_2655465_5 Succinate dehydrogenase fumarate reductase Fe-S protein subunit K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000007188 169.0
PJD1_k127_265647_0 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 2.073e-208 657.0
PJD1_k127_265647_1 DNA mismatch repair protein MutS - - - 0.000000000000000000000000000000000000000000000000000000000000001283 223.0
PJD1_k127_265647_2 - - - - 0.000000000000000000000000001588 120.0
PJD1_k127_2685875_0 PFAM Periplasmic copper-binding protein (NosD) K07218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 382.0
PJD1_k127_2685875_1 lipoprotein involved in nitrous oxide reduction K19342 - - 0.0000000000000000000000000000493 121.0
PJD1_k127_2708106_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1206.0
PJD1_k127_2715398_0 amino acid K03294 - - 1.431e-214 673.0
PJD1_k127_2715398_1 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 421.0
PJD1_k127_2715398_2 Phenazine biosynthesis-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000961 262.0
PJD1_k127_2715398_3 Protein of unknown function, DUF393 - - - 0.0000000000000000000000000000000000000006005 153.0
PJD1_k127_2744743_0 COG1705 Muramidase (flagellum-specific) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009187 312.0
PJD1_k127_2744743_1 O-methyltransferase K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001013 282.0
PJD1_k127_2767206_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 5.52e-196 614.0
PJD1_k127_2772266_0 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 520.0
PJD1_k127_2772266_1 Domain of unknown function (DUF5103) - - - 0.00000000000000000000000000000000000000000000000000000000000000000875 231.0
PJD1_k127_2772266_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000000000000000000000000000000000000002751 228.0
PJD1_k127_2778048_0 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 565.0
PJD1_k127_2778048_1 GHMP kinases N terminal domain K07031 - 2.7.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 534.0
PJD1_k127_2778048_2 glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 509.0
PJD1_k127_2778048_3 Nucleotidyl transferase K15669 - 2.7.7.71 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 486.0
PJD1_k127_2778048_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 341.0
PJD1_k127_2778048_5 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 289.0
PJD1_k127_2783829_1 - - - - 0.000000000000000000000000001185 127.0
PJD1_k127_2810055_0 Dahp synthetase i kdsa K04516 - 5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 580.0
PJD1_k127_2810055_1 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 411.0
PJD1_k127_2810055_2 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 381.0
PJD1_k127_2810055_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000008292 85.0
PJD1_k127_2835825_0 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007402 284.0
PJD1_k127_2835825_1 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000009968 193.0
PJD1_k127_2848058_0 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 562.0
PJD1_k127_2848058_1 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006772 325.0
PJD1_k127_2848058_2 Endoribonuclease L-PSP K15067 - 3.5.99.5 0.0000000000000000000000000000000000000000000000000000001143 197.0
PJD1_k127_2848058_3 Belongs to the aldehyde dehydrogenase family K00128,K00130,K10217 - 1.2.1.3,1.2.1.32,1.2.1.8,1.2.1.85 0.00000000000000000000000000000000001043 136.0
PJD1_k127_2852916_0 COG1233 Phytoene dehydrogenase and related K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 8.868e-207 654.0
PJD1_k127_2852916_1 Squalene phytoene synthase - - - 0.0000000000000000000008254 95.0
PJD1_k127_285509_0 Gliding motility-associated protein GldM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 398.0
PJD1_k127_285509_1 TIGRFAM gliding motility associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000933 301.0
PJD1_k127_285509_2 TIGRFAM gliding motility-associated protein GldL - - - 0.00000000000000000000000000000000000000004112 153.0
PJD1_k127_2859825_0 Outer membrane protein beta-barrel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 455.0
PJD1_k127_2859825_1 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251 297.0
PJD1_k127_2877669_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 8.48e-229 711.0
PJD1_k127_2877669_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000002297 112.0
PJD1_k127_289220_0 Zn-dependent protease contains TPR repeats - - - 0.00000000000000000000000000000000000000634 156.0
PJD1_k127_289220_1 Protein of unknown function (DUF2452) - - - 0.000000000000004942 77.0
PJD1_k127_2906331_0 peptidase S1 and S6 chymotrypsin Hap - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 368.0
PJD1_k127_2906331_1 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005646 258.0
PJD1_k127_2906331_2 Nucleotidyl transferase - - - 0.00000000000000000000004013 99.0
PJD1_k127_2913401_0 Molecular chaperone DnaK - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001309 253.0
PJD1_k127_2913401_1 PhoD-like phosphatase K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000001767 254.0
PJD1_k127_2913401_2 cell wall organization - - - 0.0000000000000000000000000001732 124.0
PJD1_k127_2913401_3 Outer membrane protein beta-barrel domain - - - 0.0004094 51.0
PJD1_k127_2916787_0 C-terminal domain of CHU protein family - - - 2.249e-212 676.0
PJD1_k127_2920960_0 receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 348.0
PJD1_k127_2920960_1 PFAM Methyltransferase type 12 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 335.0
PJD1_k127_2920960_2 - - - - 0.00000000000000001324 92.0
PJD1_k127_2920960_3 Glutamine cyclotransferase K00683 - 2.3.2.5 0.000000000003174 66.0
PJD1_k127_292389_0 Asparaginyl-tRNA synthetase K01893 - 6.1.1.22 2.269e-226 705.0
PJD1_k127_2928624_1 amidohydrolase - - - 0.000000000000000000000000000000000002691 141.0
PJD1_k127_2930745_0 TIGRFAM mannose-6-phosphate isomerase, class I K01809 - 5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000004755 246.0
PJD1_k127_2930745_1 PFAM Uncharacterised protein family (UPF0153) K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000006097 226.0
PJD1_k127_2930745_2 - - - - 0.000000000000000000000000000000000000000000000003032 179.0
PJD1_k127_2930745_3 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000000000000006661 145.0
PJD1_k127_2930745_4 TIGRFAM mannose-6-phosphate isomerase, class I K01809 - 5.3.1.8 0.0000000000000000000000000000000000001908 145.0
PJD1_k127_2930745_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000001966 58.0
PJD1_k127_2935429_0 acyl-CoA dehydrogenase - - - 8.181e-213 665.0
PJD1_k127_2935429_1 PFAM Cytochrome c assembly protein K02198 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 529.0
PJD1_k127_2935429_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000008235 184.0
PJD1_k127_2935429_3 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000000001537 177.0
PJD1_k127_2943531_0 ABC transporter transmembrane region K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 456.0
PJD1_k127_2943531_1 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008865 342.0
PJD1_k127_2956758_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 1.556e-256 798.0
PJD1_k127_2956758_1 PFAM MazG nucleotide pyrophosphohydrolase - - - 0.0000000000000000000000000000000000004303 140.0
PJD1_k127_2956758_2 Protein of unknown function (DUF1569) - - - 0.0000000000007459 69.0
PJD1_k127_2964403_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008743 494.0
PJD1_k127_2964403_2 - - - - 0.000000000000008024 80.0
PJD1_k127_2967099_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 363.0
PJD1_k127_2967099_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006387 297.0
PJD1_k127_2968230_0 Starch-binding associating with outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001829 276.0
PJD1_k127_2968230_1 Domain of unknown function (DUF1735) - - - 0.00000000000000000000000000000000000000000000000000372 193.0
PJD1_k127_2968230_2 Protein of unknown function (DUF3467) - - - 0.000000000000000000000000000002139 121.0
PJD1_k127_2968230_3 siderophore transport - - - 0.000000001835 61.0
PJD1_k127_2979611_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 1.14e-218 691.0
PJD1_k127_2979611_1 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412 355.0
PJD1_k127_2979611_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004741 261.0
PJD1_k127_2979611_3 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000000000000000000000006265 131.0
PJD1_k127_2979611_4 von Willebrand factor, type A K07114 - - 0.0000000000000000000006731 102.0
PJD1_k127_300480_0 Oxygen tolerance - - - 0.0000000000000000000000000000000000000000000000000000000000000000009451 246.0
PJD1_k127_300480_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000002227 106.0
PJD1_k127_3007055_0 COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit K02621 - - 3.275e-269 833.0
PJD1_k127_3007055_1 Protein of unknown function - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 398.0
PJD1_k127_3007055_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 389.0
PJD1_k127_3007055_3 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 0.000000000000000000000000000000001783 130.0
PJD1_k127_3028889_0 - - - - 0.000000000000000002321 94.0
PJD1_k127_3028889_1 - - - - 0.000000000000001587 78.0
PJD1_k127_3029981_0 TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001118 276.0
PJD1_k127_3029981_1 Pfam:SusD K21572 - - 0.00000000000000000000000000000000000000000000000000000006628 205.0
PJD1_k127_3031654_0 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 294.0
PJD1_k127_3031654_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000003094 194.0
PJD1_k127_3040619_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 366.0
PJD1_k127_3061420_0 leucine binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009101 360.0
PJD1_k127_3061420_1 DEAD DEAH box helicase K03724 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 314.0
PJD1_k127_3062229_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006038 594.0
PJD1_k127_3062229_1 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 349.0
PJD1_k127_3062229_2 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000007155 153.0
PJD1_k127_3062229_3 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000000000001263 90.0
PJD1_k127_306831_0 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 286.0
PJD1_k127_306831_1 Protein of unknown function (DUF1203) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001765 243.0
PJD1_k127_306831_2 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.00000000000004104 72.0
PJD1_k127_3074241_0 decarboxylase K01585 - 4.1.1.19 3.235e-280 863.0
PJD1_k127_307587_0 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007959 437.0
PJD1_k127_307587_1 Protein of unknown function (DUF3095) - - - 0.00000000000000000000000000000001924 128.0
PJD1_k127_3081670_0 RNA polymerase, sigma-54 factor K03092 - - 1.477e-237 742.0
PJD1_k127_3081670_1 MBOAT, membrane-bound O-acyltransferase family - - - 1.597e-196 618.0
PJD1_k127_3081670_2 GDSL-like Lipase/Acylhydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003582 270.0
PJD1_k127_3085097_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 8.199e-311 959.0
PJD1_k127_3085097_1 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000232 194.0
PJD1_k127_3085097_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000131 127.0
PJD1_k127_3098958_0 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II K01835 - 5.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 411.0
PJD1_k127_3098958_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 335.0
PJD1_k127_3098958_2 Peptidase family M48 K03799 - - 0.000000000000000000000000000000000000000002082 159.0
PJD1_k127_3101446_0 Involved in cell wall - - - 0.000000000000000000000000000000000000000000000005533 183.0
PJD1_k127_3101446_1 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000001334 154.0
PJD1_k127_3115780_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001058 246.0
PJD1_k127_3115780_1 - - - - 0.0000000000000000000000000000004637 125.0
PJD1_k127_3115780_2 Protein of unknown function (DUF1624) - - - 0.0000000000000003054 79.0
PJD1_k127_312119_0 Ribosomal protein S1 K02945 - - 0.0 1078.0
PJD1_k127_312119_1 Acyl-transferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005924 398.0
PJD1_k127_312119_2 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001229 268.0
PJD1_k127_312119_3 HI0933 family K07007 - - 0.00000000000000000000000000000000000000000002017 163.0
PJD1_k127_312119_4 Proline dehydrogenase K00318 - - 0.00000000000000000005519 91.0
PJD1_k127_3129418_0 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile K01241 - 3.2.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 451.0
PJD1_k127_3129418_1 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.0000000000000000000000000000000000000000000007402 167.0
PJD1_k127_3130432_0 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006976 366.0
PJD1_k127_3130432_1 Transporter K14445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 349.0
PJD1_k127_3142347_0 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 372.0
PJD1_k127_3142347_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006757 374.0
PJD1_k127_3142347_2 - - - - 0.000000000000003439 80.0
PJD1_k127_3142811_0 Peptidase family M13 K07386 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007381 282.0
PJD1_k127_3142811_1 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000001046 167.0
PJD1_k127_3145911_0 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 587.0
PJD1_k127_3145911_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003288 267.0
PJD1_k127_3153003_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000002729 238.0
PJD1_k127_3153003_1 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000148 205.0
PJD1_k127_3153003_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000532 177.0
PJD1_k127_315635_0 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 509.0
PJD1_k127_315635_1 Amino acid permease - - - 0.000000004335 58.0
PJD1_k127_3166383_0 mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008706 473.0
PJD1_k127_3166383_1 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000854 125.0
PJD1_k127_3170861_0 - - - - 0.00000000000000000000000000002933 128.0
PJD1_k127_3170861_1 Protein of unknown function (DUF3365) - - - 0.00000000000000000000000007843 114.0
PJD1_k127_3170861_2 Aldo keto reductase - - - 0.00000000002526 64.0
PJD1_k127_3170861_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K16079,K21572 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000004248 67.0
PJD1_k127_3193405_0 Urate oxidase N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 332.0
PJD1_k127_3193405_1 Molecular chaperone. Has ATPase activity K04079 - - 0.00000000000000000000000000000000000000000000000000000000003158 209.0
PJD1_k127_319571_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335,K18331 - 1.12.1.3,1.6.5.3 5.123e-253 782.0
PJD1_k127_319571_1 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 3.396e-201 630.0
PJD1_k127_319571_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 379.0
PJD1_k127_319571_3 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000001002 145.0
PJD1_k127_3208576_0 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 420.0
PJD1_k127_3208576_1 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000001539 242.0
PJD1_k127_3214978_0 Oxidoreductase K00184 - - 4.064e-320 998.0
PJD1_k127_3216261_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 2.968e-200 629.0
PJD1_k127_3216261_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 281.0
PJD1_k127_3216261_2 NUMOD4 motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002908 265.0
PJD1_k127_3222236_0 aldehyde oxidase and xanthine dehydrogenase a b hammerhead K13482 - 1.17.1.4 0.0 1049.0
PJD1_k127_3222236_1 CO dehydrogenase flavoprotein C-terminal domain K13481 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006646 508.0
PJD1_k127_3222236_2 - - - - 0.0000000000000000000000003329 111.0
PJD1_k127_3241679_0 TIGRFAM Nicotinamide mononucleotide transporter PnuC K03811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004917 280.0
PJD1_k127_3241679_1 Xanthine and CO dehydrogenase maturation factor XdhC CoxF family-like protein K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002245 261.0
PJD1_k127_3241679_2 peptidase M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000005207 224.0
PJD1_k127_3241679_3 Cupin domain - - - 0.0000000000000000000000000000000000000000001804 161.0
PJD1_k127_3276446_0 Papain family cysteine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 570.0
PJD1_k127_3281748_0 AhpC TSA family K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 385.0
PJD1_k127_3281748_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 297.0
PJD1_k127_3281748_2 redox protein regulator of disulfide bond formation K07397 - - 0.00000000000000000000000001335 116.0
PJD1_k127_33024_0 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007343 346.0
PJD1_k127_33024_1 Domain of unknown function (DUF892) - - - 0.000000000000000000000000000000000000007654 153.0
PJD1_k127_3304313_0 DNA polymerase III, epsilon subunit K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 325.0
PJD1_k127_3304313_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000002362 126.0
PJD1_k127_3305639_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006703 545.0
PJD1_k127_3305639_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000002754 219.0
PJD1_k127_3319644_0 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 492.0
PJD1_k127_3319644_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000162 215.0
PJD1_k127_3319644_2 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000002777 179.0
PJD1_k127_3330823_0 acr, cog1678 K07735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 297.0
PJD1_k127_3330823_1 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.0000000000000000000000000000000000000007926 156.0
PJD1_k127_3339595_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 1.411e-271 845.0
PJD1_k127_3339595_1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007508 329.0
PJD1_k127_3339595_3 PepSY-associated TM region K09939 - - 0.000000000000000000000000000000000000000000000000000000001658 206.0
PJD1_k127_3339595_4 TonB dependent receptor K16087 - - 0.0000000000000000000000000000000000000000000249 164.0
PJD1_k127_3342537_0 DNA helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007812 428.0
PJD1_k127_3342537_1 Asparaginase, N-terminal K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000001254 199.0
PJD1_k127_3374425_0 metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000009912 229.0
PJD1_k127_3374425_1 Gaf domain - - - 0.00000000009775 63.0
PJD1_k127_3377921_0 Phosphate starvation-inducible protein PhoH K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 540.0
PJD1_k127_3383396_0 PFAM FAD dependent oxidoreductase K00285 - 1.4.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 483.0
PJD1_k127_3383396_1 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 422.0
PJD1_k127_3383396_2 Belongs to the proline racemase family K12658 - 5.1.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 346.0
PJD1_k127_3383396_3 Belongs to the BshC family K22136 - - 0.0000000000000000003475 90.0
PJD1_k127_3386704_0 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005633 305.0
PJD1_k127_3386704_1 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000001568 252.0
PJD1_k127_3392785_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 3.118e-230 717.0
PJD1_k127_3392785_1 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 453.0
PJD1_k127_3392785_10 PFAM Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000000000000000001402 209.0
PJD1_k127_3392785_11 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000002936 204.0
PJD1_k127_3392785_12 Colicin V production protein K03558 - - 0.0000000000000000000000000000000000000000000002172 173.0
PJD1_k127_3392785_13 TIGRFAM Gliding motility-associated protein, GldC - - - 0.0000000000000000000000000000000000000000000008779 168.0
PJD1_k127_3392785_14 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000001378 147.0
PJD1_k127_3392785_15 Nodulation protein S (NodS) - - - 0.0000000000000000000000000002444 116.0
PJD1_k127_3392785_16 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00002196 47.0
PJD1_k127_3392785_2 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006192 443.0
PJD1_k127_3392785_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 374.0
PJD1_k127_3392785_4 Domain of unknown function (DUF4290) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 338.0
PJD1_k127_3392785_5 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 346.0
PJD1_k127_3392785_6 Transporter associated domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001291 274.0
PJD1_k127_3392785_7 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001524 241.0
PJD1_k127_3392785_8 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001751 228.0
PJD1_k127_3392785_9 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000004968 225.0
PJD1_k127_339321_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007369 503.0
PJD1_k127_339321_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006562 288.0
PJD1_k127_339321_2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000001124 164.0
PJD1_k127_3396058_0 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001273 254.0
PJD1_k127_3396058_1 methionine sulfoxide reductase K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000006636 55.0
PJD1_k127_3404203_0 hydrolase, family 3 - - - 0.0 1196.0
PJD1_k127_3404203_1 PFAM PSP1 C-terminal conserved region - - - 5.676e-199 628.0
PJD1_k127_3404203_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 364.0
PJD1_k127_3404203_3 COG2812 DNA polymerase III, gamma tau subunits K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000003271 202.0
PJD1_k127_342493_0 Belongs to the UbiD family K03182 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 355.0
PJD1_k127_342493_1 ATP-grasp in the biosynthetic pathway with Ter operon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009162 293.0
PJD1_k127_342493_2 TraB family K09973 - - 0.0000000000000000000000000000000000000000000000000000000000000000006899 239.0
PJD1_k127_342719_0 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009274 324.0
PJD1_k127_342719_1 metabolite transporter - - - 0.000000000000000000000000000000000000000000000000297 182.0
PJD1_k127_3431276_0 PFAM Glycoside hydrolase, family 77 K00705 - 2.4.1.25 2.153e-241 757.0
PJD1_k127_3431276_1 Mandelate racemase muconate lactonizing enzyme K01776,K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20,5.1.1.3 0.00000000000000000000000000000000000000000000000000000000003283 206.0
PJD1_k127_3431276_2 PFAM Glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.00000000000000000000000000000000000000373 146.0
PJD1_k127_3444532_0 - - - - 0.00000000000000000000000000000000000000000000000001127 192.0
PJD1_k127_3444532_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000001184 66.0
PJD1_k127_3444532_2 TPR repeat - - - 0.000108 48.0
PJD1_k127_3444876_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 408.0
PJD1_k127_3444876_1 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 297.0
PJD1_k127_3444876_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000001874 112.0
PJD1_k127_344771_0 abc transporter (atp-binding protein) K06147,K11085 - - 1.52e-204 654.0
PJD1_k127_344771_1 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 589.0
PJD1_k127_344771_2 ABC-type transport system involved in lipoprotein release permease component K09808,K09815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000899 473.0
PJD1_k127_344771_3 Transketolase K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008322 457.0
PJD1_k127_344771_4 of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005683 381.0
PJD1_k127_344771_5 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 361.0
PJD1_k127_344771_6 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000000000000000572 186.0
PJD1_k127_344771_7 - - - - 0.00000000000000000000000000000000001242 138.0
PJD1_k127_349498_0 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000697 506.0
PJD1_k127_349498_1 Fatty acid desaturase K00508 - 1.14.19.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000583 503.0
PJD1_k127_349498_2 GlcNAc-PI de-N-acetylase K01463 - - 0.0000000000000000000001866 97.0
PJD1_k127_350931_0 Amidohydrolase family K01466 - 3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 513.0
PJD1_k127_350931_1 Allantoicase repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 418.0
PJD1_k127_350931_2 OHCU decarboxylase K16840 - 4.1.1.97 0.000000000000000000000000000000000000000000000003682 177.0
PJD1_k127_350931_3 Transthyretin K07127 - 3.5.2.17 0.0000000000000000000000000000000000001258 144.0
PJD1_k127_350931_4 Belongs to the HpcH HpaI aldolase family - - - 0.000000000000000000000000000000000001439 141.0
PJD1_k127_3515901_0 PFAM Tetratricopeptide - - - 0.0 1070.0
PJD1_k127_3515901_1 Peptidase M50 - - - 0.000000000000000000000000000000000000000000000000001437 195.0
PJD1_k127_3515901_2 receptor - - - 0.00000000000000000000000000000000000000004212 157.0
PJD1_k127_3515901_3 - - - - 0.0000000000000000000000000000000000000001701 154.0
PJD1_k127_3515901_4 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 0.0000000000000000000000000000000000000003875 150.0
PJD1_k127_3539584_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 376.0
PJD1_k127_3539584_1 PFAM GumN - - - 0.000000000000000000000000000000000018 143.0
PJD1_k127_3549312_0 Outer membrane protein protective antigen OMA87 - - - 1.212e-232 740.0
PJD1_k127_3549312_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 320.0
PJD1_k127_3549312_2 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000001961 97.0
PJD1_k127_3555098_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006103 481.0
PJD1_k127_3555098_1 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000002136 166.0
PJD1_k127_355748_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 4.713e-212 666.0
PJD1_k127_3559503_0 Outer membrane protein beta-barrel family - - - 6.741e-262 829.0
PJD1_k127_3559503_1 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 2.584e-249 778.0
PJD1_k127_3559503_2 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 424.0
PJD1_k127_3559503_3 Domain of unknown function (DUF1905) - - - 0.0000000000000000000000000000000000000000000000000000000001649 208.0
PJD1_k127_3559503_4 PFAM Low affinity iron permease - - - 0.0000000000000000000000000000000000000000000000000002929 188.0
PJD1_k127_3559503_5 Mur ligase family, catalytic domain - - - 0.000000000000000000000000000000000000000336 151.0
PJD1_k127_3559503_6 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.0000000000000000000000000000000007626 133.0
PJD1_k127_3559503_7 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.000000000000000000000000003896 113.0
PJD1_k127_3560796_0 Rhodanese Homology Domain K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 323.0
PJD1_k127_3581169_0 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 480.0
PJD1_k127_3581169_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001778 274.0
PJD1_k127_358291_0 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005175 329.0
PJD1_k127_358291_1 Pfam 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000000001449 204.0
PJD1_k127_358291_2 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000001339 154.0
PJD1_k127_3610141_0 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 497.0
PJD1_k127_3615619_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 562.0
PJD1_k127_3621478_0 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 463.0
PJD1_k127_3621478_1 Single-stranded DNA-binding protein K03111 - - 0.000000000000000000000000000000000000000000000000000000000000000000001358 237.0
PJD1_k127_3621478_2 TIGRFAM gliding motility-associated lipoprotein GldD - - - 0.000000000000000000000000000000000000000000000000000000000000000000007694 239.0
PJD1_k127_3644405_0 S1 P1 Nuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005478 268.0
PJD1_k127_3644405_1 Hep Hag repeat protein - - - 0.00000000000000000000000000000000000000000000000000000001448 210.0
PJD1_k127_3655079_0 Glycosyl hydrolase-like 10 - - - 8.739e-215 674.0
PJD1_k127_3655079_1 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 0.0000000000000000000000000000000000000000000000001487 185.0
PJD1_k127_3655079_2 Cytochrome c - - - 0.000000000000000000000002956 106.0
PJD1_k127_3658708_0 Protein of unknown function (DUF1501) - - - 1.054e-211 669.0
PJD1_k127_3658708_1 Protein of unknown function (DUF1800) - - - 0.00000000000000000001024 94.0
PJD1_k127_3658708_2 Urate oxidase N-terminal - - - 0.00000598 52.0
PJD1_k127_3659904_0 Motility related/secretion protein - - - 6.514e-232 731.0
PJD1_k127_3661939_0 protein conserved in bacteria (DUF2329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 332.0
PJD1_k127_3661939_1 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000000000003328 110.0
PJD1_k127_3661939_2 Concanavalin A-like lectin/glucanases superfamily - - - 0.000000000000000001117 90.0
PJD1_k127_368556_0 Belongs to the peptidase S26 family K03100 - 3.4.21.89 7.14e-201 637.0
PJD1_k127_368556_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 347.0
PJD1_k127_368556_2 MerR family K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000346 250.0
PJD1_k127_368556_3 cytidine and deoxycytidylate deaminase K01489 - 3.5.4.5 0.000000000000000000000000000000000000000000000000000000000008938 211.0
PJD1_k127_3698572_0 PQQ enzyme repeat - - - 2.03e-269 840.0
PJD1_k127_3698572_1 Belongs to the GbsR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005553 254.0
PJD1_k127_3698572_2 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000011 176.0
PJD1_k127_3699535_0 Asparaginase K13051 - 3.4.19.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007737 432.0
PJD1_k127_3699535_1 Protein involved in cellulose biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001652 284.0
PJD1_k127_3699535_2 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.000000000000000000000000000000000000000000000000000000000000001455 225.0
PJD1_k127_3699535_3 Peptidase family M1 domain K01256 - 3.4.11.2 0.000000000000000000000000000000000000008764 148.0
PJD1_k127_3699535_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000001466 112.0
PJD1_k127_3702626_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 2.713e-304 938.0
PJD1_k127_3702626_1 Alanine dehydrogenase/PNT, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003357 582.0
PJD1_k127_3702626_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 563.0
PJD1_k127_3702626_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 537.0
PJD1_k127_3702626_4 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) K15460 - 2.1.1.223 0.0000000000000000000000000000000000000000000000000000002634 202.0
PJD1_k127_3702626_5 PFAM Acetyltransferase (GNAT) family K03790 - 2.3.1.128 0.000008278 48.0
PJD1_k127_3714870_0 UbiA prenyltransferase family K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 405.0
PJD1_k127_3714870_1 Maf-like protein K06287 - - 0.00000000000000000000000000000000000007849 146.0
PJD1_k127_371888_0 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 608.0
PJD1_k127_371888_1 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 0.0001959 44.0
PJD1_k127_3732558_0 Chain length determinant protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007637 454.0
PJD1_k127_3743617_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.263e-260 812.0
PJD1_k127_3743617_1 Asparaginyl-tRNA synthetase K01893 - 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000288 198.0
PJD1_k127_3743617_2 Rhodanese Homology Domain K06917 - - 0.000000001158 59.0
PJD1_k127_3745716_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 413.0
PJD1_k127_3745716_1 SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000005075 177.0
PJD1_k127_3752451_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000003251 171.0
PJD1_k127_3773979_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 3.107e-210 660.0
PJD1_k127_3773979_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 317.0
PJD1_k127_3773979_2 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.0000000000007957 69.0
PJD1_k127_3780438_0 Peptidase family M1 domain K01256 - 3.4.11.2 3.705e-215 689.0
PJD1_k127_3781468_0 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 1.726e-250 776.0
PJD1_k127_3781468_1 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 0.000000000000000000000000000002957 119.0
PJD1_k127_3809025_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 513.0
PJD1_k127_3809025_1 NADH-quinone oxidoreductase, E subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000665 294.0
PJD1_k127_3809025_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335,K18331 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000006703 113.0
PJD1_k127_3809025_3 Domain of unknown function (DUF4440) - - - 0.00000000000001908 79.0
PJD1_k127_3826863_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007214 599.0
PJD1_k127_3826863_1 Psort location OuterMembrane, score - - - 0.000000000000000162 81.0
PJD1_k127_3829789_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 9.503e-267 826.0
PJD1_k127_3829789_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005575 432.0
PJD1_k127_3847870_0 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003895 607.0
PJD1_k127_3847870_1 Cysteine desulfurase K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007283 569.0
PJD1_k127_3847870_2 BlaR1 peptidase M56 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 326.0
PJD1_k127_3847870_3 transcriptional regulator - - - 0.00000000002266 64.0
PJD1_k127_386193_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 514.0
PJD1_k127_386193_1 PFAM Phosphoribosyl transferase domain K00764 - 2.4.2.14 0.00000000001409 64.0
PJD1_k127_3867917_0 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 509.0
PJD1_k127_3867917_1 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 385.0
PJD1_k127_3873462_0 BlaR1 peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002794 244.0
PJD1_k127_3873462_1 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.00000000000000000000000000000000000000000000000000000000000000000006977 233.0
PJD1_k127_3873462_2 Transcriptional repressor, CopY family - - - 0.00000000000000000000000000000000000000000000000000000002372 199.0
PJD1_k127_388304_0 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 396.0
PJD1_k127_3884641_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1187.0
PJD1_k127_3905914_0 PFAM Peptidase C14, caspase catalytic - - - 0.0000000000000000000000000000001422 138.0
PJD1_k127_390629_0 Proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 5.432e-285 887.0
PJD1_k127_390629_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 466.0
PJD1_k127_390629_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000000000009449 173.0
PJD1_k127_390629_3 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000122 100.0
PJD1_k127_3910723_0 Carboxypeptidase regulatory-like domain - - - 8.248e-288 902.0
PJD1_k127_3965595_0 Transketolase K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 569.0
PJD1_k127_3965595_1 PFAM NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 562.0
PJD1_k127_3965595_2 Belongs to the SEDS family K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 415.0
PJD1_k127_3965595_3 Metallo-beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 336.0
PJD1_k127_3965595_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009436 329.0
PJD1_k127_3965595_5 phosphate transporter K03306 - - 0.00000000000000000000000000000000000000000000005239 169.0
PJD1_k127_3965595_6 - - - - 0.000003341 55.0
PJD1_k127_3965595_7 - - - - 0.00002289 54.0
PJD1_k127_398823_0 TonB dependent receptor K02014,K16089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 539.0
PJD1_k127_40119_0 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 473.0
PJD1_k127_40119_1 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000904 175.0
PJD1_k127_4016757_0 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 381.0
PJD1_k127_4016757_1 Outer membrane protein SusF_SusE K21571 - - 0.0000000000000000000000000000002557 130.0
PJD1_k127_4033422_0 Hexapeptide repeat of succinyl-transferase K02617,K08279 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 286.0
PJD1_k127_4033422_1 phenylacetic acid degradation protein K02614 - - 0.000000000000000000000000000000000000000000000000000000000001335 212.0
PJD1_k127_4039243_0 gliding motility-associated lipoprotein GldJ - - - 6.794e-232 728.0
PJD1_k127_4039243_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 392.0
PJD1_k127_40651_0 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 350.0
PJD1_k127_4066186_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006344 437.0
PJD1_k127_4066186_1 Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 319.0
PJD1_k127_4069839_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 1.346e-296 921.0
PJD1_k127_4069839_1 Protein of unknown function (DUF1569) - - - 0.000000000000000000000000000000000003519 143.0
PJD1_k127_4075867_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 8.185e-227 709.0
PJD1_k127_4075867_1 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 1.605e-218 690.0
PJD1_k127_4084743_0 Dehydrogenase K00102,K00104 - 1.1.2.4,1.1.3.15 2.236e-200 632.0
PJD1_k127_4084743_1 TonB-dependent receptor K02014,K16087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 417.0
PJD1_k127_4084743_2 PFAM PKD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 301.0
PJD1_k127_409535_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 536.0
PJD1_k127_409535_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000007882 216.0
PJD1_k127_4101160_0 PFAM Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009008 569.0
PJD1_k127_4125627_0 Bacterial Ig-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 464.0
PJD1_k127_4125627_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000009001 77.0
PJD1_k127_4130691_0 electron transfer activity K02660 - - 0.000000000000000000000000000000000000000000000001829 184.0
PJD1_k127_4130691_1 Dehydrogenase K00074 - 1.1.1.157 0.000000000222 62.0
PJD1_k127_4132594_0 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006284 424.0
PJD1_k127_4135341_0 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 541.0
PJD1_k127_4135341_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 327.0
PJD1_k127_4140947_0 ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 543.0
PJD1_k127_4160502_0 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001151 260.0
PJD1_k127_4160502_1 Signal transduction histidine kinase, LytS - - - 0.0000000000000000000000000000000000000000000000000000003887 207.0
PJD1_k127_4160502_2 - - - - 0.0000000000000000000000000008982 116.0
PJD1_k127_4160502_4 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000003488 55.0
PJD1_k127_416413_0 AMP-dependent synthetase K01897 - 6.2.1.3 2.522e-297 921.0
PJD1_k127_416413_1 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 557.0
PJD1_k127_416413_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 358.0
PJD1_k127_416413_3 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.00000000000000000000000000000000000000000000000000001945 190.0
PJD1_k127_416413_4 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.0000000000000000000000000000000000000000004243 160.0
PJD1_k127_416413_6 ATP-independent chaperone mediated protein folding - - - 0.00000000489 63.0
PJD1_k127_4164395_0 Erythromycin esterase K06880 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 464.0
PJD1_k127_4164395_1 COG1247 Sortase and related acyltransferases K03823 - 2.3.1.183 0.000000000000000000000000000000000000000000000000005661 186.0
PJD1_k127_416787_0 Peptidase family M1 domain - - - 1.776e-198 625.0
PJD1_k127_416787_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 333.0
PJD1_k127_4188865_0 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004 267.0
PJD1_k127_4188865_1 TIGRFAM Peroxiredoxin, osmotically inducible protein C, subgroup K04063 - - 0.00000000000000000000000000000000000000000000008925 171.0
PJD1_k127_4188865_3 L,D-transpeptidase catalytic domain - - - 0.000000000000001737 77.0
PJD1_k127_4190313_0 Carbamoyl-phosphate synthase K01955 - 6.3.5.5 0.0 1693.0
PJD1_k127_4190313_1 Peptidase, M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 339.0
PJD1_k127_4190313_2 radical SAM domain protein - - - 0.0000000000319 76.0
PJD1_k127_4194759_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 2.391e-282 873.0
PJD1_k127_4194759_1 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000004407 222.0
PJD1_k127_4203392_0 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 417.0
PJD1_k127_4203392_1 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000001902 87.0
PJD1_k127_4226919_0 B12 binding domain K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005852 557.0
PJD1_k127_4226919_1 Methionine synthase K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 520.0
PJD1_k127_42326_0 Two component regulator propeller domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 390.0
PJD1_k127_423618_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 1.843e-214 669.0
PJD1_k127_4236573_0 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 300.0
PJD1_k127_4236573_1 1-aminocyclopropane-1-carboxylate deaminase K01505 - 3.5.99.7 0.000000000000000000000000000000000000000000000000000000000000004547 226.0
PJD1_k127_42398_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000003451 162.0
PJD1_k127_42398_2 S53, subtilisin kexin sedolisin - - - 0.0000000000002435 72.0
PJD1_k127_4248520_0 Glucosamine-6-phosphate K02564 - 3.5.99.6 1.353e-297 920.0
PJD1_k127_4248520_1 Pfam Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 0.0000000000000000000000000000000002137 139.0
PJD1_k127_4257214_0 phosphoesterase, PA-phosphatase related - - - 0.000000000000000000000000000000000000000000000000000000000003011 216.0
PJD1_k127_4257214_1 COG2755 Lysophospholipase L1 and related esterases - - - 0.000000000000000000000000000000000000000000000000002219 191.0
PJD1_k127_4257214_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000001036 173.0
PJD1_k127_4257214_3 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - 0.0000000000000000000000000000000000000000002404 164.0
PJD1_k127_4272894_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 9.91e-239 742.0
PJD1_k127_4296870_0 metallophosphoesterase - - - 1.995e-247 781.0
PJD1_k127_4296870_1 metallophosphoesterase - - - 0.0000000000000431 72.0
PJD1_k127_4299027_0 COG1055 Na H antiporter NhaD and related arsenite - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008273 554.0
PJD1_k127_4299027_1 OstA-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002595 258.0
PJD1_k127_4301756_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1189.0
PJD1_k127_4301756_1 Amidophosphoribosyltransferase K00764 - 2.4.2.14 1.362e-257 802.0
PJD1_k127_4301756_2 Participates in both transcription termination and antitermination K02600 - - 4.777e-234 727.0
PJD1_k127_4301756_3 peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 521.0
PJD1_k127_4301756_4 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000008685 193.0
PJD1_k127_4306696_0 Belongs to the ompA family - - - 8.19e-229 724.0
PJD1_k127_4306696_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004488 451.0
PJD1_k127_4306696_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 318.0
PJD1_k127_4306696_3 photosystem II stabilization - - - 0.0000000004018 67.0
PJD1_k127_4318818_0 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II K01835 - 5.4.2.2 0.000000000000000000000000000000000000000000000000000001176 194.0
PJD1_k127_4318818_1 Lysin motif - - - 0.00000000000000000000000000000000000000000000001015 173.0
PJD1_k127_4318818_2 BON domain - - - 0.00000000000000000000000000000000000000134 152.0
PJD1_k127_4320958_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 367.0
PJD1_k127_4320958_1 response regulator, receiver K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001113 279.0
PJD1_k127_4320958_2 response regulator, receiver K02477 - - 0.00000000000000000000001926 100.0
PJD1_k127_4320958_3 membrane protein (DUF2154) - - - 0.00000000000009586 71.0
PJD1_k127_4325736_0 Thymidylate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 316.0
PJD1_k127_4325736_1 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000000000003875 183.0
PJD1_k127_4325736_2 transport, permease protein K01992 - - 0.000000000000000000000000000000000000000003052 162.0
PJD1_k127_4336262_0 NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 3.801e-195 611.0
PJD1_k127_4336262_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.0000000000000000000000000000000000000006625 149.0
PJD1_k127_4336262_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000004126 114.0
PJD1_k127_4345007_0 Caspase domain - - - 0.00000000000000000000000000000000000005552 163.0
PJD1_k127_435225_0 Belongs to the arginase family K01479,K12255 - 3.5.3.7,3.5.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004752 416.0
PJD1_k127_4355880_0 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 7.895e-241 762.0
PJD1_k127_4364212_0 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 589.0
PJD1_k127_4364212_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001147 276.0
PJD1_k127_4364212_2 Dual-action HEIGH metallo-peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001872 256.0
PJD1_k127_4408265_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007301 512.0
PJD1_k127_4408265_1 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 438.0
PJD1_k127_4408265_2 Pfam Biopolymer transport protein ExbD TolR - - - 0.00000000000000000000000000000000009055 137.0
PJD1_k127_441222_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000105 206.0
PJD1_k127_441222_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000001576 203.0
PJD1_k127_441222_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000007419 121.0
PJD1_k127_4413926_0 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 456.0
PJD1_k127_4413926_1 metabolite transporter - - - 0.000000000000000000000000000000001597 134.0
PJD1_k127_4422661_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 374.0
PJD1_k127_4442535_0 GAF domain K03406 - - 0.0 1527.0
PJD1_k127_4442535_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 353.0
PJD1_k127_4450572_0 aconitate hydratase K01681 - 4.2.1.3 3.921e-226 705.0
PJD1_k127_4478868_1 MatE - - - 0.00002173 48.0
PJD1_k127_4486185_0 of the RND superfamily K07003 - - 1.14e-200 632.0
PJD1_k127_4487912_0 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 449.0
PJD1_k127_4487912_1 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004543 325.0
PJD1_k127_4487912_2 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00632 - 2.3.1.16 0.0000000000000000000000006275 104.0
PJD1_k127_4502554_0 PFAM TonB-dependent Receptor Plug Domain - - - 2.691e-219 690.0
PJD1_k127_4502554_1 Phage integrase, N-terminal SAM-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006424 368.0
PJD1_k127_450789_0 Starch-binding associating with outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 507.0
PJD1_k127_4510681_0 Methionine aminopeptidase K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 416.0
PJD1_k127_4510681_1 HI0933 family K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005343 301.0
PJD1_k127_4522986_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1282.0
PJD1_k127_4522986_1 TIGRFAM PAS domain S-box - - - 0.00000000000000000000000000000000002937 148.0
PJD1_k127_4524802_0 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 469.0
PJD1_k127_4524802_1 Protein of unknown function (DUF721) - - - 0.0000000000000000000000000000000000001879 142.0
PJD1_k127_4526122_0 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 516.0
PJD1_k127_4526122_1 Methyltransferase domain - - - 0.0000000000000000000000000002665 115.0
PJD1_k127_4537188_0 Beta-lactamase K01286 - 3.4.16.4 0.00000000000000000000000000000007521 140.0
PJD1_k127_4550788_0 penicillin-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 361.0
PJD1_k127_4550788_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000008089 209.0
PJD1_k127_455881_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006591 368.0
PJD1_k127_455881_1 YhhN family - - - 0.00000000000000000000000000000000000001154 152.0
PJD1_k127_4565094_0 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002748 265.0
PJD1_k127_4565094_1 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000577 237.0
PJD1_k127_4565094_2 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000006983 154.0
PJD1_k127_4565094_3 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000004461 149.0
PJD1_k127_4565094_4 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000000000000000001718 95.0
PJD1_k127_4565094_5 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000002266 64.0
PJD1_k127_4574877_0 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 490.0
PJD1_k127_4574877_1 Peptidase M1, membrane alanine aminopeptidase - - - 0.000000000000000000000000000002702 123.0
PJD1_k127_4578296_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009677 479.0
PJD1_k127_4578296_1 - - - - 0.00000006674 57.0
PJD1_k127_4578296_2 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0002416 44.0
PJD1_k127_4579675_0 protein methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005315 396.0
PJD1_k127_4579675_1 peptidase M42 - - - 0.000000000000000000000000000000000000000000000000000000000000468 211.0
PJD1_k127_4584373_0 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006131 361.0
PJD1_k127_4584373_1 ABC transporter transmembrane region K06147,K11085 - - 0.000000000000000001086 88.0
PJD1_k127_4584373_2 Glycosyltransferase Family 4 - - - 0.000000000573 63.0
PJD1_k127_4587636_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006944 509.0
PJD1_k127_4587728_1 Aldo keto reductase - - - 0.0000000000000000000000000000001972 126.0
PJD1_k127_4588421_0 PFAM PKD domain - - - 2.588e-287 921.0
PJD1_k127_4588421_1 protein CHP03519, membrane, Bacteroidetes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000949 351.0
PJD1_k127_458934_0 glucosamine N-acyltransferase K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009403 441.0
PJD1_k127_458934_1 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 298.0
PJD1_k127_458934_2 NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003701 278.0
PJD1_k127_4592591_0 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 349.0
PJD1_k127_4592591_1 single-stranded DNA-binding protein K03111 - - 0.00000000000000000000000000000000000000000000000000000001262 200.0
PJD1_k127_4593224_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 592.0
PJD1_k127_4599900_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 370.0
PJD1_k127_4599900_1 Permease, YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000001734 230.0
PJD1_k127_4609113_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002062 251.0
PJD1_k127_4609113_1 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000007396 132.0
PJD1_k127_4634784_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 417.0
PJD1_k127_4634784_1 PFAM Acetyltransferase (GNAT) family K03790 - 2.3.1.128 0.0000000000000000000000000009205 117.0
PJD1_k127_4634784_2 Heat shock protein - - - 0.00000000001036 70.0
PJD1_k127_4636729_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007722 518.0
PJD1_k127_4636729_1 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 420.0
PJD1_k127_4636729_2 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 359.0
PJD1_k127_4636729_3 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005542 296.0
PJD1_k127_4636729_4 Alpha-2-macroglobulin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000706 253.0
PJD1_k127_4636729_5 Domain of unknown function (DUF4114) - - - 0.00000000004718 72.0
PJD1_k127_4638793_0 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 475.0
PJD1_k127_4638793_1 tigr02436 - - - 0.000000000000000000000004433 103.0
PJD1_k127_4659903_0 PFAM Peptidase M1 membrane alanine aminopeptidase K01256 - 3.4.11.2 1.304e-242 755.0
PJD1_k127_4671431_0 metallopeptidase activity - - - 0.00000000000000000000000000000000000000002768 172.0
PJD1_k127_4689761_0 tRNA nucleotidyltransferase K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005261 518.0
PJD1_k127_4689761_1 membrane protein involved in aromatic hydrocarbon degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 429.0
PJD1_k127_4689761_2 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003997 328.0
PJD1_k127_4689761_3 Plasmid pRiA4b ORF-3-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008171 263.0
PJD1_k127_4689761_4 tRNA nucleotidyltransferase K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000001299 130.0
PJD1_k127_4689761_5 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000000008766 63.0
PJD1_k127_4704836_0 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 344.0
PJD1_k127_4704836_1 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000005956 238.0
PJD1_k127_4704836_2 GCN5-related N-acetyl-transferase K06975 - - 0.0000000000000000009724 85.0
PJD1_k127_4715487_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 507.0
PJD1_k127_4715487_1 N-acetylglucosamine kinase - - - 0.000000000000000000000000000006971 122.0
PJD1_k127_4722562_0 PFAM PKD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 496.0
PJD1_k127_4722562_1 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 476.0
PJD1_k127_4722562_2 BlaR1 peptidase M56 - - - 0.00000001102 66.0
PJD1_k127_4731343_0 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000627 288.0
PJD1_k127_4731343_1 PFAM Pregnancy-associated plasma protein-A - - - 0.000000000000000000000000000000000000000000000000000000000000000008597 247.0
PJD1_k127_4760028_0 COG2373 Large extracellular alpha-helical protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 618.0
PJD1_k127_4761345_0 CarboxypepD_reg-like domain - - - 1.74e-266 842.0
PJD1_k127_4761345_1 Belongs to the UPF0176 family K07146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 410.0
PJD1_k127_4775357_0 protein conserved in bacteria (DUF2329) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009216 540.0
PJD1_k127_478255_0 Radical SAM K11784 - 1.21.98.1 6.653e-224 696.0
PJD1_k127_478255_1 Peptidase M16 K07263 - - 2.529e-207 650.0
PJD1_k127_478255_10 Domain of unknown function (DUF3817) - - - 0.000000000000000000004102 96.0
PJD1_k127_478255_11 Lipid A 3-O-deacylase (PagL) - - - 0.000000000000007556 78.0
PJD1_k127_478255_2 Aspartyl protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 459.0
PJD1_k127_478255_3 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002674 428.0
PJD1_k127_478255_4 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009999 336.0
PJD1_k127_478255_5 Lipid A 3-O-deacylase (PagL) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001671 286.0
PJD1_k127_478255_6 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001491 263.0
PJD1_k127_478255_7 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000001161 162.0
PJD1_k127_478255_8 Peptidase M16 - - - 0.0000000000000000000000000000000521 129.0
PJD1_k127_478255_9 - - - - 0.00000000000000000000009907 104.0
PJD1_k127_4787867_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 1.007e-229 717.0
PJD1_k127_4787867_1 PKD domain containing protein - - - 0.0000000000000000000000000000000000000007665 151.0
PJD1_k127_4803393_0 Bacterial membrane protein YfhO - - - 3.92e-238 758.0
PJD1_k127_4816115_0 alginic acid biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009912 601.0
PJD1_k127_4816115_1 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 352.0
PJD1_k127_4816115_2 Forms part of the polypeptide exit tunnel K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 334.0
PJD1_k127_4816115_3 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000001635 195.0
PJD1_k127_4816115_4 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000000000000001914 157.0
PJD1_k127_4827752_0 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 1.912e-201 632.0
PJD1_k127_4827752_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000582 369.0
PJD1_k127_4827752_2 Thioredoxin - - - 0.000000000000000000000000000000004399 130.0
PJD1_k127_4827866_0 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 411.0
PJD1_k127_4827866_1 deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 395.0
PJD1_k127_4827866_2 secreted Zn-dependent protease - - - 0.0000000000000000000000000000019 127.0
PJD1_k127_4837517_0 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 358.0
PJD1_k127_4837517_1 Belongs to the ompA family - - - 0.000000000004877 66.0
PJD1_k127_4852026_0 N-acetylmuramoyl-L-alanine amidase K01447,K11066 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008515 338.0
PJD1_k127_4852026_1 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000000000000000004506 216.0
PJD1_k127_4852026_2 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000000000000000000000006315 189.0
PJD1_k127_4853902_0 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000005806 197.0
PJD1_k127_4853902_1 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000006018 199.0
PJD1_k127_4853902_2 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.000000000000000000000000000000000005545 138.0
PJD1_k127_4854510_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 1.042e-261 813.0
PJD1_k127_4854510_1 endonuclease exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 405.0
PJD1_k127_4854510_2 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 316.0
PJD1_k127_4854510_3 PFAM HhH-GPD superfamily base excision DNA repair protein K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 295.0
PJD1_k127_4854510_4 Rhomboid family K09650 - 3.4.21.105 0.000000000000000000004535 93.0
PJD1_k127_4868608_0 Oxidoreductase FAD-binding domain K00523,K05784 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 340.0
PJD1_k127_4868608_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008651 312.0
PJD1_k127_4868608_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 308.0
PJD1_k127_4868608_3 Lipocalin-like domain K03098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009417 243.0
PJD1_k127_4868608_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.0000000000000000000000000000000000000000000834 162.0
PJD1_k127_4868608_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0002839 44.0
PJD1_k127_4880527_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 444.0
PJD1_k127_4880527_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 305.0
PJD1_k127_4891084_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 6.672e-199 629.0
PJD1_k127_4901931_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 7.579e-209 655.0
PJD1_k127_4901931_1 beta-lactamase - - - 0.00000000000000000000000000005136 121.0
PJD1_k127_4902302_0 DEAD DEAH box helicase K03724 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 579.0
PJD1_k127_4902302_1 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.0000000000000000000000000000000004234 136.0
PJD1_k127_4906001_0 Macrocin-O-methyltransferase (TylF) - - - 0.00000000000000000000000000000000000000236 150.0
PJD1_k127_4906001_1 Glycosyltransferase WbsX - - - 0.000000000000000000001405 103.0
PJD1_k127_4909401_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003888 292.0
PJD1_k127_4909401_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000001334 211.0
PJD1_k127_4920404_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007691 339.0
PJD1_k127_4920404_1 chaperone-mediated protein folding K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002283 269.0
PJD1_k127_4921442_0 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 2.079e-206 649.0
PJD1_k127_4921442_1 Glycosyl transferase family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 340.0
PJD1_k127_4921442_2 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000000000000000000000000000000000000009786 210.0
PJD1_k127_4921442_3 Amidophosphoribosyltransferase K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000174 165.0
PJD1_k127_4921442_4 - - - - 0.000000000003411 74.0
PJD1_k127_4924715_0 Participates in both transcription termination and antitermination K02600 - - 2.169e-225 703.0
PJD1_k127_4924715_1 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000027 194.0
PJD1_k127_4924715_2 formamidopyrimidine-DNA glycosylase K05522 - 4.2.99.18 0.00000000000003598 73.0
PJD1_k127_4928073_0 elongation factor G domain IV K02355 - - 3.282e-275 850.0
PJD1_k127_4947403_0 - - - - 0.00000000000000000000000000000001057 138.0
PJD1_k127_495423_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 390.0
PJD1_k127_4955209_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008907 323.0
PJD1_k127_4955209_1 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000978 270.0
PJD1_k127_4955209_2 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000000001486 222.0
PJD1_k127_4955566_0 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 480.0
PJD1_k127_4955566_1 Protein of unknown function (DUF2795) - - - 0.0000000000000000000000000000000000000000366 153.0
PJD1_k127_4955566_2 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K00648 - 2.3.1.180 0.0000000000000000000000000000000000000002957 153.0
PJD1_k127_4955566_3 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.000000000000000000000000000000003882 129.0
PJD1_k127_4957036_0 Belongs to the glycosyl hydrolase 13 family - - - 9.751e-314 988.0
PJD1_k127_4957036_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004342 421.0
PJD1_k127_4957036_2 Nudix hydrolase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000006882 243.0
PJD1_k127_4972997_0 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000001173 217.0
PJD1_k127_4972997_1 Cytochrome c K02305,K07152 - - 0.0000000000000000000000000000000000000001475 154.0
PJD1_k127_4983357_0 Carbohydrate family 9 binding domain-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 353.0
PJD1_k127_4983357_1 transcriptional regulator - - - 0.00000000000000000000000001795 109.0
PJD1_k127_4987538_0 Protein of unknown function (DUF2851) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003302 246.0
PJD1_k127_4987538_1 Maf-like protein K06287 - - 0.000000000000000000000000000002083 121.0
PJD1_k127_499411_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 2.691e-229 714.0
PJD1_k127_499411_1 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 310.0
PJD1_k127_5002339_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 518.0
PJD1_k127_5002339_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000002902 75.0
PJD1_k127_5011511_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 5.286e-257 799.0
PJD1_k127_5011511_1 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 290.0
PJD1_k127_5013764_0 LmbE family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 499.0
PJD1_k127_5013764_1 PFAM Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 400.0
PJD1_k127_5013789_0 COGs COG2270 Permease of the major facilitator superfamily K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 573.0
PJD1_k127_5013789_1 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.0000000000000000000000000000000000000000000000000000000000000000001865 231.0
PJD1_k127_5013789_2 beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000004104 202.0
PJD1_k127_5032061_0 transporter - - - 8.722e-227 711.0
PJD1_k127_5032061_1 - - - - 0.0000000000000000000000002516 106.0
PJD1_k127_5032632_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0 1024.0
PJD1_k127_5032632_1 Endoribonuclease that initiates mRNA decay K18682 - - 1.173e-278 862.0
PJD1_k127_5032632_2 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 355.0
PJD1_k127_5032632_3 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000000000006888 117.0
PJD1_k127_5032715_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.000000000000000000000000000000000000000000000000000000000000000001493 232.0
PJD1_k127_5032715_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000003678 171.0
PJD1_k127_5037686_0 cellulose binding - - - 0.0000000000000000000000000000000000005314 151.0
PJD1_k127_5037686_1 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000008648 102.0
PJD1_k127_5052894_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 1.584e-205 645.0
PJD1_k127_5052894_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009429 526.0
PJD1_k127_5052894_2 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000001776 211.0
PJD1_k127_5052894_3 - - - - 0.0000000000000000000000000000000000000000000001007 170.0
PJD1_k127_5052894_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000003339 155.0
PJD1_k127_5052894_5 Rieske (2Fe-2S) domain K05710 - - 0.00000000000000000000000000000002062 129.0
PJD1_k127_5052894_7 to Saccharomyces cerevisiae TOM71 (YHR117W) and TOM70 (YNL121C) K17768 GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005742,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0017038,GO:0019867,GO:0030150,GO:0030943,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031306,GO:0031307,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0032592,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045039,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072655,GO:0072657,GO:0090150,GO:0090151,GO:0098573,GO:0098588,GO:0098796,GO:0098798,GO:0098799,GO:0098805,GO:1990542 - 0.00007634 56.0
PJD1_k127_5053991_0 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 1.959e-209 655.0
PJD1_k127_5053991_1 COGs COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 342.0
PJD1_k127_5053991_2 - - - - 0.0000006536 54.0
PJD1_k127_5056834_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 325.0
PJD1_k127_5056834_1 HAD-hyrolase-like K07025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001615 243.0
PJD1_k127_506315_0 PFAM amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007707 410.0
PJD1_k127_50672_0 peptidase M24 K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 386.0
PJD1_k127_5094984_0 Belongs to the BshC family K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 480.0
PJD1_k127_5094984_1 COG0457 FOG TPR repeat - - - 0.0009954 50.0
PJD1_k127_5105518_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 2.117e-237 738.0
PJD1_k127_5105518_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000001398 121.0
PJD1_k127_5120285_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 1.858e-221 689.0
PJD1_k127_5120285_1 Domain of unknown function (DUF4270) - - - 0.000004978 53.0
PJD1_k127_5123083_0 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 583.0
PJD1_k127_5123083_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 552.0
PJD1_k127_5123083_2 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008452 541.0
PJD1_k127_5123083_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004555 486.0
PJD1_k127_5123083_4 Peptidase family S41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009163 478.0
PJD1_k127_5123083_5 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007626 407.0
PJD1_k127_5123083_6 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K13566 - 3.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 351.0
PJD1_k127_5123083_7 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000000000000001368 166.0
PJD1_k127_5123083_8 Glycosyl transferase family group 2 K07011 - - 0.000000000001977 67.0
PJD1_k127_5127858_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 1.089e-266 826.0
PJD1_k127_5127858_1 Metalloenzyme superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 528.0
PJD1_k127_5127858_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 479.0
PJD1_k127_5127858_3 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007532 330.0
PJD1_k127_5128675_0 Peptidase family S41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 582.0
PJD1_k127_5128675_1 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000009495 138.0
PJD1_k127_5128675_2 COGs COG3279 Response regulator of the LytR AlgR family - - - 0.0000000000000000000000007286 109.0
PJD1_k127_5129119_0 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) K00382 - 1.8.1.4 1.368e-228 714.0
PJD1_k127_5129119_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008381 539.0
PJD1_k127_5129119_2 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000003212 141.0
PJD1_k127_5129119_3 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000000000000704 115.0
PJD1_k127_5129119_4 Domain of unknown function (DUF4295) - - - 0.0000000000000000000006325 96.0
PJD1_k127_5129119_5 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.00000000000000001788 82.0
PJD1_k127_5156782_0 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002114 267.0
PJD1_k127_5164429_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 330.0
PJD1_k127_5164429_1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000001624 218.0
PJD1_k127_5164429_2 Histidine kinase - - - 0.00000000904 56.0
PJD1_k127_5169363_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 4.044e-221 694.0
PJD1_k127_5169363_1 PFAM Bacterial Fmu (Sun) eukaryotic nucleolar NOL1 Nop2p - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009144 503.0
PJD1_k127_5169363_2 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000566 167.0
PJD1_k127_5169363_3 LysM domain K01449 - 3.5.1.28 0.000000000000318 73.0
PJD1_k127_5169363_4 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 0.0000000002329 61.0
PJD1_k127_5186624_0 protein with SCP PR1 domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 340.0
PJD1_k127_5186624_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0000000000000000000000000001243 115.0
PJD1_k127_5186624_2 - - - - 0.0000001422 54.0
PJD1_k127_5198962_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 2.436e-251 782.0
PJD1_k127_5198962_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 561.0
PJD1_k127_520263_0 Belongs to the GPI family K01810 - 5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 537.0
PJD1_k127_520263_1 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 472.0
PJD1_k127_5207195_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000001003 195.0
PJD1_k127_5216875_0 Major Facilitator K16211 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 396.0
PJD1_k127_5216875_1 Belongs to the glycosyl hydrolase 13 family K21575 GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016798,GO:0031216,GO:0044464,GO:0071944 3.2.1.135 0.0000000000000000002331 90.0
PJD1_k127_5225458_0 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 481.0
PJD1_k127_5225458_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002576 458.0
PJD1_k127_5225458_2 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000002584 179.0
PJD1_k127_523431_0 von Willebrand factor, type A K07114 - - 3.416e-228 716.0
PJD1_k127_523431_1 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 346.0
PJD1_k127_523431_2 Saccharopine dehydrogenase K00290,K00293 - 1.5.1.10,1.5.1.7 0.0000000000009871 68.0
PJD1_k127_5242183_0 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 372.0
PJD1_k127_5242183_1 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 286.0
PJD1_k127_5242183_2 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.00000000000000000000000000000000000000000000000000000000002013 207.0
PJD1_k127_5242183_3 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000001659 142.0
PJD1_k127_5242183_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000003712 117.0
PJD1_k127_5249559_0 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000002934 153.0
PJD1_k127_5249559_1 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000003291 134.0
PJD1_k127_525100_0 lacI family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005248 403.0
PJD1_k127_525100_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000002703 156.0
PJD1_k127_525100_3 Paraquat-inducible protein A K03808 - - 0.0000001779 59.0
PJD1_k127_5253904_0 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008145 457.0
PJD1_k127_5255100_0 ABC transporter K18889 - - 3.624e-200 634.0
PJD1_k127_5267552_0 PKD domain containing protein - - - 2.88e-289 912.0
PJD1_k127_5267552_1 Belongs to the UPF0145 family - - - 0.0000000000000000000000000000000000000001762 151.0
PJD1_k127_5267552_3 lipid catabolic process - GO:0003674,GO:0003824,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016787,GO:0033554,GO:0050896,GO:0051716 - 0.0000000000000000001005 93.0
PJD1_k127_527462_0 N-acetyl-alpha-D-glucosaminyl L-malate synthase K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 572.0
PJD1_k127_527462_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 377.0
PJD1_k127_527462_2 Peptidase, M23 - - - 0.00000000000000000000000000000000000005493 148.0
PJD1_k127_5286021_0 acyl-CoA dehydrogenase - - - 1e-323 997.0
PJD1_k127_5286021_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000004067 231.0
PJD1_k127_5286021_2 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000001181 196.0
PJD1_k127_5286021_3 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000003273 113.0
PJD1_k127_5305913_0 Formiminotransferase domain, N-terminal subdomain K00603,K13990 - 2.1.2.5,4.3.1.4 2.863e-236 739.0
PJD1_k127_5309039_0 heat shock protein 70 K04043,K04044 - - 5.93e-232 726.0
PJD1_k127_5309039_1 Peptidase family C25 - - - 4.341e-213 679.0
PJD1_k127_5313650_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 1.843e-269 835.0
PJD1_k127_5316832_0 COG2373 Large extracellular alpha-helical protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 556.0
PJD1_k127_5321945_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006895 518.0
PJD1_k127_5321945_1 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003377 488.0
PJD1_k127_5321945_2 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000008532 199.0
PJD1_k127_5321945_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000001706 142.0
PJD1_k127_5330888_0 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.0 1054.0
PJD1_k127_5330888_1 C-terminal region of band_7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 509.0
PJD1_k127_5330888_2 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 456.0
PJD1_k127_5330888_3 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005631 361.0
PJD1_k127_5338078_0 S53, subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007917 473.0
PJD1_k127_5338078_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.000000000000002767 77.0
PJD1_k127_5338078_2 - - - - 0.000000000004115 67.0
PJD1_k127_5338078_3 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0003354 48.0
PJD1_k127_5352110_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 2.251e-200 639.0
PJD1_k127_5352110_1 ABC-2 family transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008426 262.0
PJD1_k127_5352110_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000001005 151.0
PJD1_k127_5352110_3 Domain of unknown function (DUF5122) beta-propeller - - - 0.00000000000000001716 90.0
PJD1_k127_5368019_0 ABC transporter K06158 - - 3.648e-309 958.0
PJD1_k127_5368019_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006877 312.0
PJD1_k127_5369535_0 lysine 2,3-aminomutase activity - - - 2.11e-217 681.0
PJD1_k127_5369535_1 tryptophanase activity K01667 - 4.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 296.0
PJD1_k127_537160_0 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016049,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030154,GO:0030312,GO:0030313,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 8e-323 997.0
PJD1_k127_5372602_0 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000462 406.0
PJD1_k127_5372602_1 Pseudouridine synthase K06179,K06180 - 5.4.99.23,5.4.99.24 0.000000000000000000000000000000000000000000000000001865 186.0
PJD1_k127_5372602_2 ATP-independent chaperone mediated protein folding - - - 0.000000000000000000000004368 110.0
PJD1_k127_5378203_0 COG0308 Aminopeptidase N - - - 3.126e-298 927.0
PJD1_k127_5378203_1 P-loop ATPase protein family - - - 8.979e-233 728.0
PJD1_k127_5378203_2 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 1.7e-223 703.0
PJD1_k127_5378203_3 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005351 357.0
PJD1_k127_5382085_0 DoxX family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004031 410.0
PJD1_k127_5382085_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007648 353.0
PJD1_k127_5382085_2 Domain of Unknown Function (DUF1599) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000538 258.0
PJD1_k127_5382293_0 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) K03545 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 432.0
PJD1_k127_5382293_1 - - - - 0.000601 43.0
PJD1_k127_5384702_0 Deoxyhypusine synthase K00809 - 2.5.1.46 4.09e-203 633.0
PJD1_k127_5397512_0 Peptidase M14, carboxypeptidase A - - - 7.89e-250 781.0
PJD1_k127_5397512_1 PFAM Major Facilitator Superfamily K08156 - - 0.000000000000000000000000000000000009509 141.0
PJD1_k127_540634_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 510.0
PJD1_k127_5409372_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.00000000000000000000000000000000000000000000000001214 180.0
PJD1_k127_5409372_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000005121 173.0
PJD1_k127_5409372_2 Transcriptional regulator - - - 0.000000000000000000000000002479 113.0
PJD1_k127_5414403_0 Belongs to the DegT DnrJ EryC1 family K19715 - 2.6.1.109 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 415.0
PJD1_k127_5414403_1 PFAM Uncharacterised BCR, COG1649 - - - 0.00000000000000000000000000000000000000000000000000000000000000002322 231.0
PJD1_k127_5433367_0 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000000000000005467 178.0
PJD1_k127_5433367_1 Preprotein translocase subunit YajC K03210 - - 0.000000000000000000000000000000000000003235 150.0
PJD1_k127_5433367_2 InterPro IPR011467 - - - 0.0000000000000000000002402 99.0
PJD1_k127_543942_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 7.664e-273 844.0
PJD1_k127_543942_1 - - - - 0.0000000000000000000000000294 118.0
PJD1_k127_543942_2 pfam rdd - - - 0.00000000000000003007 83.0
PJD1_k127_543942_3 - - - - 0.000002143 57.0
PJD1_k127_5444035_0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000008288 218.0
PJD1_k127_5444035_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000001824 217.0
PJD1_k127_5450314_0 Glutamine cyclotransferase K00683 - 2.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000005513 232.0
PJD1_k127_5450314_1 Thermolysin metallopeptidase, catalytic domain - - - 0.0000000000000000000000000000000000000006847 154.0
PJD1_k127_5454400_0 phosphorylase K00757 - 2.4.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 476.0
PJD1_k127_5454400_1 Pfam Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000000000000000000000001169 214.0
PJD1_k127_5454400_3 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000004626 141.0
PJD1_k127_5454400_5 Peptidyl-prolyl cis-trans K03772 - 5.2.1.8 0.0000000000000000000007621 99.0
PJD1_k127_5455335_0 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 391.0
PJD1_k127_5455335_1 Protein of unknown function (DUF2480) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007868 245.0
PJD1_k127_5461027_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1439.0
PJD1_k127_5461027_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004199 371.0
PJD1_k127_5461027_2 Protein of unknown function (DUF1579) - - - 0.00002792 49.0
PJD1_k127_5470060_0 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 464.0
PJD1_k127_5474072_0 Peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000000008757 182.0
PJD1_k127_5474072_1 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000000000000000168 177.0
PJD1_k127_5474072_2 G8 domain - - - 0.00000000000000000004506 97.0
PJD1_k127_5477652_0 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 476.0
PJD1_k127_5477652_1 Phosphoglycerate mutase family - - - 0.0000000000008904 72.0
PJD1_k127_5481744_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000002939 215.0
PJD1_k127_5481744_1 FIST N domain - - - 0.0000000000000000002374 94.0
PJD1_k127_5484551_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0 1231.0
PJD1_k127_5484551_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 384.0
PJD1_k127_5488588_0 DNA mismatch repair protein MutS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008887 384.0
PJD1_k127_550204_0 Protein conserved in bacteria - - - 0.0 1071.0
PJD1_k127_550204_1 gliding motility-associated C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000197 301.0
PJD1_k127_550883_0 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005546 387.0
PJD1_k127_550883_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000009257 224.0
PJD1_k127_5514126_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 440.0
PJD1_k127_5514126_1 apolipoprotein N-acyltransferase K03820 - - 0.00000000000000000000008047 100.0
PJD1_k127_5514783_0 Histidine ammonia-lyase K01745 - 4.3.1.3 7.17e-223 695.0
PJD1_k127_5514783_1 Histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000009549 117.0
PJD1_k127_5514876_0 ABC-type Na efflux pump, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 340.0
PJD1_k127_5514876_1 nuclear chromosome segregation - - - 0.000000000000000000000856 105.0
PJD1_k127_5516977_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1466.0
PJD1_k127_5516977_1 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002765 287.0
PJD1_k127_5518069_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 586.0
PJD1_k127_5518069_1 - - - - 0.00000000000000000000003571 104.0
PJD1_k127_5518069_2 - - - - 0.0000000000000004479 80.0
PJD1_k127_5526145_0 COG1228 Imidazolonepropionase and related K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007901 562.0
PJD1_k127_5526145_1 PFAM sodium hydrogen exchanger - - - 0.0000000000000000000000000000000000001531 147.0
PJD1_k127_5526145_2 - - - - 0.000000000000000000007163 98.0
PJD1_k127_553351_0 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 294.0
PJD1_k127_553351_1 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K07443 - 2.1.1.63 0.0000000000000000000000000000000000000000000003669 167.0
PJD1_k127_553351_2 - - - - 0.00000000000000005249 82.0
PJD1_k127_5538156_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 560.0
PJD1_k127_5538156_1 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000001635 195.0
PJD1_k127_5538156_2 MacB-like periplasmic core domain - - - 0.0000000000000000005584 87.0
PJD1_k127_5556526_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401 517.0
PJD1_k127_5556526_1 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 314.0
PJD1_k127_5556526_2 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008166 266.0
PJD1_k127_5556526_3 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.0000000000000000000000000000005464 123.0
PJD1_k127_5558024_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 360.0
PJD1_k127_5558024_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 341.0
PJD1_k127_5561526_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 0.00000000000000000000000000000000000000000000000000000000000000001532 226.0
PJD1_k127_5561526_1 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000002524 177.0
PJD1_k127_5561526_2 PFAM Phosphoesterase, HXTX - - - 0.000000000000000000000000000000000003432 143.0
PJD1_k127_5587273_0 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005565 430.0
PJD1_k127_5587273_1 Major Facilitator - - - 0.0000000000000000000000000000000000000000000000000000002338 196.0
PJD1_k127_5590499_0 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007132 306.0
PJD1_k127_5590499_1 6-pyruvoyl tetrahydrobiopterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000004358 256.0
PJD1_k127_5590499_2 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.0000000000000000000000000000000000000000000000002222 184.0
PJD1_k127_5593580_0 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 606.0
PJD1_k127_5593580_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008476 392.0
PJD1_k127_5593580_2 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000001209 230.0
PJD1_k127_5593580_3 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000459 153.0
PJD1_k127_559366_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.101e-299 927.0
PJD1_k127_5595266_0 PFAM Integral membrane protein DUF95 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 330.0
PJD1_k127_5595266_1 - - - - 0.000000000000000000000000000000000000000000002038 176.0
PJD1_k127_5599603_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 4.192e-268 828.0
PJD1_k127_5599603_1 Radical SAM - - - 0.0004857 43.0
PJD1_k127_5599603_2 Glycosyl transferases group 1 - - - 0.0009201 45.0
PJD1_k127_560646_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 5.522e-214 671.0
PJD1_k127_560646_1 COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 310.0
PJD1_k127_560646_2 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000002101 136.0
PJD1_k127_560646_3 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P) K00849 - 2.7.1.6 0.00000000000000000000000000000000131 132.0
PJD1_k127_5609090_0 PFAM Aldehyde dehydrogenase K13877 - 1.2.1.26 2.702e-210 663.0
PJD1_k127_5609090_1 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 577.0
PJD1_k127_5609090_2 Belongs to the DapA family K01714,K21062 - 3.5.4.22,4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 421.0
PJD1_k127_5609090_3 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000003234 222.0
PJD1_k127_5613185_0 Natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004816 292.0
PJD1_k127_5613185_1 PFAM Allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000557 281.0
PJD1_k127_5613185_2 Belongs to the UPF0271 (lamB) family K07160 - - 0.0000000000000000000000000000000000000000000000000000000000000000005853 235.0
PJD1_k127_5623667_0 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 450.0
PJD1_k127_5623667_1 PFAM Beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000003704 190.0
PJD1_k127_5623667_2 - - - - 0.000000000000000000000000000000003391 134.0
PJD1_k127_5627551_0 domain, Protein K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001413 267.0
PJD1_k127_5640469_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 1.136e-242 757.0
PJD1_k127_5640469_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 535.0
PJD1_k127_5640469_2 N-terminal domain of Peptidase_S41 in eukaryotic IRBP - - - 0.00000000006874 63.0
PJD1_k127_564991_0 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 302.0
PJD1_k127_564991_1 Asparaginase K13051 - 3.4.19.5 0.0000000000000000000000000000000000000000000000000000002357 198.0
PJD1_k127_564991_2 Outer membrane protein beta-barrel domain - - - 0.00000734 56.0
PJD1_k127_5650655_0 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005545 349.0
PJD1_k127_5650655_1 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000007739 204.0
PJD1_k127_5657865_0 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 610.0
PJD1_k127_5657865_1 ABC-type phosphate transport system periplasmic K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 318.0
PJD1_k127_5657865_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000001672 134.0
PJD1_k127_5657865_4 PFAM Tetratricopeptide - - - 0.00000000000136 70.0
PJD1_k127_5660389_0 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000004161 248.0
PJD1_k127_5660389_1 COGs COG0663 Carbonic anhydrase acetyltransferase isoleucine patch superfamily - - - 0.00000000000000000000000000000005502 125.0
PJD1_k127_5661282_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006599 507.0
PJD1_k127_5661282_1 COG2373 Large extracellular alpha-helical protein - - - 0.000000000000000000000000000000000000000000000000000002458 206.0
PJD1_k127_5671134_0 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009189 307.0
PJD1_k127_5671134_1 Lysine exporter protein (Lyse ygga) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001862 256.0
PJD1_k127_5671134_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000007884 235.0
PJD1_k127_5671134_3 GH3 auxin-responsive promoter - - - 0.000000000000000000007817 92.0
PJD1_k127_5674350_0 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 295.0
PJD1_k127_5674350_1 Protein of unknown function (DUF3467) - - - 0.0000000003031 60.0
PJD1_k127_5677701_0 - - - - 0.000000000000000000000000000000000000000000000001702 182.0
PJD1_k127_5677701_1 elongation factor G domain IV K02355 - - 0.00000000000000000000000000000000001579 136.0
PJD1_k127_5677701_2 Psort location Extracellular, score - - - 0.000000002842 69.0
PJD1_k127_5677701_3 Glycosyl hydrolases family 16 - - - 0.0000004581 62.0
PJD1_k127_5679418_0 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000001293 185.0
PJD1_k127_5679418_1 Belongs to the heme-copper respiratory oxidase family - - - 0.0000000000000000000000000000000000000000003078 164.0
PJD1_k127_5679418_2 Pfam:DUF59 - - - 0.000000000000000000000000000000000000000004414 156.0
PJD1_k127_5683745_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008464 331.0
PJD1_k127_5683745_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 315.0
PJD1_k127_568877_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 559.0
PJD1_k127_568877_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000386 442.0
PJD1_k127_568877_2 Acetyltransferase, gnat family K03829 - - 0.0000000000000000000000000000000000000000000000000000000001272 206.0
PJD1_k127_568877_3 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000005445 204.0
PJD1_k127_5692060_0 Chaperone of endosialidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001224 252.0
PJD1_k127_5692060_1 Chaperone of endosialidase - - - 0.0000000000000000000000000000000000000531 147.0
PJD1_k127_5695385_0 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009852 596.0
PJD1_k127_5695385_1 Tricorn protease C1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 382.0
PJD1_k127_5695385_2 Ion transport protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 374.0
PJD1_k127_5695385_3 Belongs to the cysteine synthase cystathionine beta- synthase family K01697,K01738,K12339 - 2.5.1.47,4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008164 351.0
PJD1_k127_5707041_0 endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000000002763 192.0
PJD1_k127_5707041_1 3-hydroxyacyl-CoA dehydrogenase K00074,K17735 - 1.1.1.108,1.1.1.157 0.000000000000000000000000000000000000000000000001431 180.0
PJD1_k127_5707041_2 PFAM Peptidase M22, glycoprotease K14742 - - 0.00000000000000000000000000000000005089 137.0
PJD1_k127_5709261_0 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 326.0
PJD1_k127_5709261_1 Outer membrane chaperone Skp K06142 - - 0.000000000000000000000003201 109.0
PJD1_k127_5723665_0 Outer membrane protein beta-barrel family - - - 4.932e-231 732.0
PJD1_k127_5723665_1 Glycine cleavage H-protein K02437 - - 0.0000000000000000000000000000000000000000000000000000000004881 206.0
PJD1_k127_5723665_2 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000005049 115.0
PJD1_k127_5723683_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003053 289.0
PJD1_k127_5723683_1 YceI-like domain - - - 0.000000000000000000008586 106.0
PJD1_k127_5725366_0 Predicted periplasmic lipoprotein (DUF2279) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 363.0
PJD1_k127_5725366_1 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000022 190.0
PJD1_k127_5725366_2 Fe-S oxidoreductase - - - 0.000000000000000000000000000000001226 131.0
PJD1_k127_5734157_0 Belongs to the peptidase M16 family K07263 - - 3.059e-285 904.0
PJD1_k127_5734157_1 methionine sulfoxide reductase K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000002236 262.0
PJD1_k127_5734157_2 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K03790 - 2.3.1.128 0.000000000000000000000000000000000000000000000000000000001285 213.0
PJD1_k127_5734157_3 - - - - 0.00000000003312 70.0
PJD1_k127_5744903_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 4.19e-219 687.0
PJD1_k127_5744903_1 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003794 414.0
PJD1_k127_5744903_2 Penicillin binding protein transpeptidase domain K17838 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 386.0
PJD1_k127_5744903_3 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003592 321.0
PJD1_k127_5744903_4 belongs to the thioredoxin family K20541 - - 0.00000000000000000001348 99.0
PJD1_k127_5744903_5 - - - - 0.0000000003209 68.0
PJD1_k127_575195_0 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 438.0
PJD1_k127_5755935_0 Hep Hag repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000006239 242.0
PJD1_k127_5755935_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000119 91.0
PJD1_k127_5755935_2 - - - - 0.0008902 49.0
PJD1_k127_5756066_0 PFAM GH3 auxin-responsive promoter - - - 4.445e-282 871.0
PJD1_k127_5756066_1 ABC transporter K06861 - - 0.000000000000000000000003263 102.0
PJD1_k127_5764047_0 glucose-1-phosphate adenylyltransferase K00975 - 2.7.7.27 9.927e-209 655.0
PJD1_k127_5764047_1 Major Facilitator K16211 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 396.0
PJD1_k127_5772476_0 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 303.0
PJD1_k127_5772476_1 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001538 240.0
PJD1_k127_5774737_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 413.0
PJD1_k127_5774737_1 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000385 271.0
PJD1_k127_5775118_0 Domain of unknown function (DUF4157) - - - 0.000000000000000000000000000000001063 144.0
PJD1_k127_5775118_1 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000001938 131.0
PJD1_k127_5775839_0 DNA segregation ATPase FtsK SpoIIIE and related K03466 - - 1.017e-305 951.0
PJD1_k127_5775839_1 outer membrane lipoprotein carrier protein LolA K03634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003756 256.0
PJD1_k127_5776541_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 340.0
PJD1_k127_5776541_1 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001134 245.0
PJD1_k127_5776541_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0000000000000000000009691 96.0
PJD1_k127_5776541_3 Metallo-beta-lactamase superfamily - - - 0.0000000000006144 69.0
PJD1_k127_5780414_0 B12 binding domain K00548 - 2.1.1.13 6.547e-197 623.0
PJD1_k127_5787097_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 443.0
PJD1_k127_578733_0 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 345.0
PJD1_k127_578733_1 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.0000000000000000000000000000000000000000000000000000000000000000000199 233.0
PJD1_k127_578733_2 Phenylacetic acid degradation B K02610 - - 0.00000000000000000000000000000000000000000000000000000003767 198.0
PJD1_k127_578733_3 Phenylacetate-CoA oxygenase K02612 - - 0.000000001542 61.0
PJD1_k127_5787422_0 response to stress - - - 0.000000000000000000000000000000000005721 143.0
PJD1_k127_5787422_1 - - - - 0.00000002233 64.0
PJD1_k127_5791325_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 363.0
PJD1_k127_5791325_1 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003289 270.0
PJD1_k127_5791325_2 - - - - 0.000000000000000000000000000000000000000000000000000000000003851 217.0
PJD1_k127_5799561_0 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005823 287.0
PJD1_k127_58046_0 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007913 368.0
PJD1_k127_58046_1 Belongs to the SUA5 family K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000001733 205.0
PJD1_k127_580561_0 Domain of unknown function (DUF5118) - - - 4.122e-251 783.0
PJD1_k127_5812880_0 Subtilase family - - - 0.00000001698 67.0
PJD1_k127_5823990_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 382.0
PJD1_k127_5823990_1 PFAM Phosphoribosyl transferase domain K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000007966 209.0
PJD1_k127_5826231_0 PFAM Aminotransferase class I and II K00812,K14260 - 2.6.1.1,2.6.1.2,2.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 552.0
PJD1_k127_5828919_0 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 3.332e-276 861.0
PJD1_k127_5828919_1 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 3.057e-194 617.0
PJD1_k127_5828919_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 582.0
PJD1_k127_5828919_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 306.0
PJD1_k127_5828919_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000003297 248.0
PJD1_k127_5828919_5 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000001225 239.0
PJD1_k127_5828919_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000000000001686 175.0
PJD1_k127_584072_0 amino acid K03294 - - 4.435e-259 807.0
PJD1_k127_584072_1 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 445.0
PJD1_k127_584072_2 Smr domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001498 224.0
PJD1_k127_5847278_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 569.0
PJD1_k127_5847278_1 Major intrinsic protein K02440 - - 0.0000000000000000000000000000000000000000005601 160.0
PJD1_k127_5847278_2 COGs COG0663 Carbonic anhydrase acetyltransferase isoleucine patch superfamily - - - 0.0000000000000000002025 90.0
PJD1_k127_5858959_0 TonB-dependent receptor plug domain - - - 9.501e-278 886.0
PJD1_k127_5858959_1 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001918 277.0
PJD1_k127_5858959_2 Phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000003673 251.0
PJD1_k127_5858959_3 Transposase - - - 0.00000000000000000000000000000000000000007813 162.0
PJD1_k127_5874610_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 393.0
PJD1_k127_5874610_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 306.0
PJD1_k127_5874610_2 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004271 270.0
PJD1_k127_5874610_3 Hexapeptide repeat of succinyl-transferase K13018 - 2.3.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000001136 246.0
PJD1_k127_5887711_0 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000001072 172.0
PJD1_k127_5887711_1 Protein of unknown function (DUF3455) - - - 0.00000000000000000000004873 106.0
PJD1_k127_5900297_0 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000144 228.0
PJD1_k127_5900297_1 cellulase activity - - - 0.0000000255 67.0
PJD1_k127_5905076_0 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 524.0
PJD1_k127_5905076_1 Large extracellular alpha-helical protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 402.0
PJD1_k127_5905076_2 Tyrosine recombinase XerC K04763 - - 0.000000000000000000000000000000000000000000000000005317 181.0
PJD1_k127_5905076_3 transport - - - 0.000000000000000000000000000000000000000000003201 178.0
PJD1_k127_5907731_0 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 584.0
PJD1_k127_5907731_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002049 271.0
PJD1_k127_5913212_0 Domain of unknown function (DUF4403) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008617 496.0
PJD1_k127_5913212_1 GtrA-like protein - - - 0.000000000000000000000000000000000000000000000000000000017 204.0
PJD1_k127_5913212_2 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.00000000000000000000000000000000006157 138.0
PJD1_k127_5913212_3 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00002042 46.0
PJD1_k127_5914446_0 PFAM sulfatase - - - 5.201e-195 619.0
PJD1_k127_5914446_1 - - - - 0.000000003721 57.0
PJD1_k127_5915149_0 Zinc metalloprotease (Elastase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000392 245.0
PJD1_k127_5916477_0 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000748 445.0
PJD1_k127_5916477_1 TonB-dependent receptor - - - 0.00000000000002106 78.0
PJD1_k127_5927837_0 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006384 469.0
PJD1_k127_5933079_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 542.0
PJD1_k127_5933079_1 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 489.0
PJD1_k127_5933079_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000004506 216.0
PJD1_k127_5933708_0 PFAM Cytochrome c, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 421.0
PJD1_k127_5938654_0 TonB dependent receptor K16087 - - 0.000000000000000000000000000000000000000000000000000000002307 205.0
PJD1_k127_5938654_1 Haem-binding domain - - - 0.00000000000000000000000000000000001286 137.0
PJD1_k127_5938869_0 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004066 330.0
PJD1_k127_5938869_2 Histidine kinase K07675 - 2.7.13.3 0.00000000000000000000000000000000000003952 148.0
PJD1_k127_5938869_3 SWI complex, BAF60b domains - - - 0.0000000000000000000000000000000005277 134.0
PJD1_k127_5938869_4 aconitate hydratase K01681 - 4.2.1.3 0.00000000000000000008944 89.0
PJD1_k127_5938869_5 Secreted and surface protein containing fasciclin-like repeats - - - 0.0000000000000006551 82.0
PJD1_k127_5938869_6 - - - - 0.0000132 49.0
PJD1_k127_5939013_0 alcohol dehydrogenase K19714 - 1.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009898 458.0
PJD1_k127_5939013_1 Cytidylyltransferase K00979,K19714 - 1.1.3.48,2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 353.0
PJD1_k127_5939013_2 alcohol dehydrogenase K19714 - 1.1.3.48 0.0000000000000000000000000000000000000000000000000000001725 194.0
PJD1_k127_5939013_3 Mediates influx of magnesium ions K03284 - - 0.0000000000002312 73.0
PJD1_k127_5939013_4 sterol desaturase - - - 0.0000005826 51.0
PJD1_k127_5940340_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 1.106e-231 721.0
PJD1_k127_5940340_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005454 349.0
PJD1_k127_5940340_2 TIGRFAM Gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008821 300.0
PJD1_k127_5940340_3 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003668 256.0
PJD1_k127_5940340_4 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000000000000000002725 215.0
PJD1_k127_5940340_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000000000000000174 203.0
PJD1_k127_594355_0 polysaccharide deacetylase K01179 - 3.2.1.4 1.593e-230 720.0
PJD1_k127_594355_1 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005369 259.0
PJD1_k127_5946086_0 Aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 606.0
PJD1_k127_5946086_1 Belongs to the aldehyde dehydrogenase family K22187 - - 0.0000000000000000000000000000000000000000000000000000000000006552 214.0
PJD1_k127_59498_0 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007118 400.0
PJD1_k127_59498_1 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000537 234.0
PJD1_k127_59498_2 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000133 204.0
PJD1_k127_5953598_0 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000005191 188.0
PJD1_k127_595479_0 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 432.0
PJD1_k127_595479_1 Peptidyl-prolyl cis-trans isomerase K01802,K03774,K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000003115 165.0
PJD1_k127_5981871_0 COG2373 Large extracellular alpha-helical protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009863 482.0
PJD1_k127_5983843_0 TIGRFAM methylmalonate-semialdehyde dehydrogenase K00140,K22187 - 1.2.1.18,1.2.1.27 3.351e-261 810.0
PJD1_k127_5983843_1 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 2.456e-243 759.0
PJD1_k127_5983843_2 Aminotransferase class-III K15372 - 2.6.1.55 1.678e-226 708.0
PJD1_k127_5983843_3 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009526 293.0
PJD1_k127_5983843_4 ribonuclease BN K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007629 297.0
PJD1_k127_5983843_5 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000001266 238.0
PJD1_k127_5983843_6 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000301 236.0
PJD1_k127_5983843_7 Pfam Amidohydrolase K01464 - 3.5.2.2 0.0000000000000000000000000000000000000000000000000001507 187.0
PJD1_k127_5983843_8 PFAM AhpC TSA family - - - 0.000000000000000000000000000000000000003922 151.0
PJD1_k127_5996701_0 amidohydrolase - - - 0.0 1166.0
PJD1_k127_5996701_1 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009589 252.0
PJD1_k127_5996701_2 amidohydrolase - - - 0.000000006705 57.0
PJD1_k127_6001241_0 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001145 262.0
PJD1_k127_6001241_1 Outer membrane protein beta-barrel domain - - - 0.00001617 50.0
PJD1_k127_6004745_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 8.607e-215 670.0
PJD1_k127_6004745_1 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004486 526.0
PJD1_k127_6004745_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 346.0
PJD1_k127_6004745_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 291.0
PJD1_k127_6004745_4 PFAM Peptidase family M20 M25 M40 K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000003379 204.0
PJD1_k127_6033712_0 LmbE family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 323.0
PJD1_k127_6033712_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.00000002666 55.0
PJD1_k127_6046027_0 COG2373 Large extracellular alpha-helical protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 420.0
PJD1_k127_6046027_1 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 381.0
PJD1_k127_6046027_2 - - - - 0.00000000000000000000000000000000000000000000000000003658 190.0
PJD1_k127_6046027_3 Belongs to the MtfA family K09933 - - 0.0000000000824 64.0
PJD1_k127_6046518_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008984 573.0
PJD1_k127_6046518_1 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000000001731 182.0
PJD1_k127_6046518_2 - - - - 0.0000000000000000000000004199 105.0
PJD1_k127_6060257_0 PFAM pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 497.0
PJD1_k127_6060257_1 Lamin Tail Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 472.0
PJD1_k127_6060257_2 gas vesicle protein - - - 0.0000000000000008029 79.0
PJD1_k127_6060257_3 - - - - 0.000004263 55.0
PJD1_k127_6060886_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.205e-241 751.0
PJD1_k127_6060886_1 Two component transcriptional regulator, LytTR family K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 397.0
PJD1_k127_6060886_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003869 370.0
PJD1_k127_6060886_3 Peptidase, M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000327 280.0
PJD1_k127_6065696_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 373.0
PJD1_k127_6065696_1 Protein of unknown function (DUF1573) - - - 0.00000000000000000000000000000000000001858 149.0
PJD1_k127_6065696_2 Protein of unknown function (DUF1573) - - - 0.000000000000000000000000000000002577 132.0
PJD1_k127_6068370_0 Mandelate racemase muconate lactonizing enzyme K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 486.0
PJD1_k127_6068370_1 - - - - 0.0000000000000002823 86.0
PJD1_k127_6068370_2 PFAM HhH-GPD superfamily base excision DNA repair protein K01247 - 3.2.2.21 0.000000000000004649 75.0
PJD1_k127_6072703_0 transcriptional regulator (AraC family) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000638 490.0
PJD1_k127_6072703_1 iron-regulated protein - - - 0.0000000000006153 68.0
PJD1_k127_6090462_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 483.0
PJD1_k127_6101215_0 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000000001659 212.0
PJD1_k127_6101215_1 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.000000000000000000000001408 102.0
PJD1_k127_6101215_2 L,D-transpeptidase catalytic domain K21470 - - 0.0000000000858 63.0
PJD1_k127_6107336_0 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 437.0
PJD1_k127_6107336_1 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000142 256.0
PJD1_k127_6107336_2 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000003993 201.0
PJD1_k127_6107336_3 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000001329 174.0
PJD1_k127_6107336_4 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000003202 140.0
PJD1_k127_611673_0 PFAM chorismate binding K01665,K03342 - 2.6.1.85,4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 412.0
PJD1_k127_611673_1 PFAM Transglycosylase SLT domain K08307 - - 0.0000000000000002306 82.0
PJD1_k127_6119025_0 Cys/Met metabolism PLP-dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 582.0
PJD1_k127_6119025_1 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 512.0
PJD1_k127_6119025_2 outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009059 281.0
PJD1_k127_6119025_3 TonB-dependent receptor K02014 - - 0.000000000000000004561 87.0
PJD1_k127_6121149_0 Mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 303.0
PJD1_k127_6128118_0 Transport of potassium into the cell K03549 - - 0.0 1079.0
PJD1_k127_6128118_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 505.0
PJD1_k127_6128118_2 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 473.0
PJD1_k127_6128118_3 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 440.0
PJD1_k127_6128118_4 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 349.0
PJD1_k127_6128118_5 Hydrolase with alpha beta fold protein K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000561 274.0
PJD1_k127_6128118_7 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000001507 230.0
PJD1_k127_6128118_8 protein-disulfide reductase activity K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000467 164.0
PJD1_k127_6128118_9 peptidase K01297 - 3.4.17.13 0.000000000008185 66.0
PJD1_k127_6129286_0 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000641 381.0
PJD1_k127_6129286_1 Oxygen tolerance - - - 0.0005324 49.0
PJD1_k127_6131396_0 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 1.958e-199 628.0
PJD1_k127_6132144_0 COGs COG0737 5'-nucleotidase 2' 3'-cyclic phosphodiesterase and related esterase K01081,K11751 - 3.1.3.5,3.6.1.45 0.0 1004.0
PJD1_k127_6132144_1 Cytochrome C oxidase, cbb3-type, subunit III K19713 - 1.8.2.2 0.000000000000000000000000000000000000000000000000000001176 194.0
PJD1_k127_6136103_0 GMP synthase-glutamine amidotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 416.0
PJD1_k127_6136103_1 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 341.0
PJD1_k127_6136103_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001613 273.0
PJD1_k127_616667_0 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 522.0
PJD1_k127_6171546_0 Nitrous oxide reductase K00376 - 1.7.2.4 3e-323 996.0
PJD1_k127_6171546_1 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000001074 184.0
PJD1_k127_6171546_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000481 153.0
PJD1_k127_6171546_3 Transcriptional regulator - - - 0.0000000000000000000000000000000009869 135.0
PJD1_k127_6173446_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 1.275e-198 622.0
PJD1_k127_6173446_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000005855 85.0
PJD1_k127_6173446_2 - - - - 0.0000000000000000144 90.0
PJD1_k127_6178453_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 3.478e-282 870.0
PJD1_k127_6192663_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 401.0
PJD1_k127_6192663_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000002591 120.0
PJD1_k127_6194349_0 Glutathione synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 503.0
PJD1_k127_6194349_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003767 313.0
PJD1_k127_6194349_2 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 299.0
PJD1_k127_619995_0 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 301.0
PJD1_k127_6213549_0 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 601.0
PJD1_k127_6213549_1 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 - 4.4.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 462.0
PJD1_k127_6213549_2 PFAM Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.00000000000000000000000005507 109.0
PJD1_k127_6252615_0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K21310 - 2.1.1.334 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 310.0
PJD1_k127_6252615_1 response regulator - - - 0.000000000000000000000000000172 128.0
PJD1_k127_6252615_2 - - - - 0.000000000000000001168 94.0
PJD1_k127_6278629_0 Sortilin, neurotensin receptor 3, - - - 3.641e-293 905.0
PJD1_k127_628234_0 translation release factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 434.0
PJD1_k127_628234_1 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 355.0
PJD1_k127_628234_2 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008061 300.0
PJD1_k127_628234_3 Clp protease adaptor protein ClpS K06891 - - 0.00000000000000000000000000000000002062 138.0
PJD1_k127_6287697_0 Sulfate permease family K03321 - - 6.963e-201 639.0
PJD1_k127_6287697_1 COG1055 Na H antiporter NhaD and related arsenite - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 346.0
PJD1_k127_6287697_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000008727 136.0
PJD1_k127_6291382_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003662 414.0
PJD1_k127_6291382_1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001901 250.0
PJD1_k127_6291382_2 surface antigen - - - 0.00000000000000000000000000000000000000000000000000000001916 218.0
PJD1_k127_6291382_3 tail collar domain protein - - - 0.00000000000000000000000000000000000000000009639 180.0
PJD1_k127_6291382_4 Putative binding domain, N-terminal - - - 0.00002305 53.0
PJD1_k127_6303786_0 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000004844 135.0
PJD1_k127_6303786_2 SdpI/YhfL protein family - - - 0.000000004566 59.0
PJD1_k127_6325024_0 Mg2 transporter protein, CorA family protein K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000731 491.0
PJD1_k127_6325024_1 pfam nudix - - - 0.00000000000000000000000000000000000000000000000000000000004934 207.0
PJD1_k127_6325543_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 547.0
PJD1_k127_6325543_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005276 312.0
PJD1_k127_6325543_2 - - - - 0.00001895 55.0
PJD1_k127_632784_0 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 328.0
PJD1_k127_632784_1 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000003274 196.0
PJD1_k127_632784_2 - - - - 0.000000000000000000000000000000000000000000000003328 174.0
PJD1_k127_6354204_0 Peptidase M16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 365.0
PJD1_k127_6354204_1 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000002245 149.0
PJD1_k127_6368165_0 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 495.0
PJD1_k127_6368165_1 Intracellular protease, PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009161 275.0
PJD1_k127_6368165_2 single-stranded DNA-binding protein K03111 - - 0.0000000000000000000000000000000000000009521 150.0
PJD1_k127_6368165_3 guanyl-nucleotide exchange factor activity - - - 0.000000000000000004876 98.0
PJD1_k127_6368165_4 - - - - 0.00000000000000003682 86.0
PJD1_k127_6368190_0 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000943 371.0
PJD1_k127_6368190_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 343.0
PJD1_k127_6368190_2 PFAM Sigma 54 modulation protein S30EA ribosomal protein K05808 - - 0.000000000000000000000000000000000000001053 151.0
PJD1_k127_6368190_3 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000000000000000006593 111.0
PJD1_k127_6368190_4 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.0000000000000000000004288 96.0
PJD1_k127_6417032_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007794 563.0
PJD1_k127_6417032_1 PFAM Uncharacterised ACR, YkgG family COG1556 K00782 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006109 277.0
PJD1_k127_6419280_0 PFAM ZIP Zinc transporter K07238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 344.0
PJD1_k127_6419280_1 Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 291.0
PJD1_k127_6441065_0 Protein of unknown function (DUF418) K07148 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 507.0
PJD1_k127_6441065_1 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000598 254.0
PJD1_k127_647539_0 PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000764 355.0
PJD1_k127_647539_1 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000004802 159.0
PJD1_k127_647539_2 FtsH Extracellular K03798 - - 0.00000000000000000000000002366 109.0
PJD1_k127_648480_0 Signal transduction response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 365.0
PJD1_k127_648480_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000527 339.0
PJD1_k127_648480_2 Two component regulator propeller - - - 0.00000000000000000007381 94.0
PJD1_k127_6501670_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000787 271.0
PJD1_k127_6501670_1 YceI-like domain - - - 0.00000000000004674 82.0
PJD1_k127_6501670_2 Cytochrome c - - - 0.000000002536 63.0
PJD1_k127_6503034_0 Elongator protein 3, MiaB family, Radical SAM - - - 8.539e-200 625.0
PJD1_k127_6504627_0 Belongs to the helicase family. UvrD subfamily K03657 - 3.6.4.12 0.0 1500.0
PJD1_k127_6504627_1 photosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 308.0
PJD1_k127_6504627_2 Bacterial Ig-like domain - - - 0.00000000000000000000000000000000006097 136.0
PJD1_k127_6528996_0 GTP-binding protein TypA K06207 - - 0.0 1071.0
PJD1_k127_6528996_1 pathogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001306 262.0
PJD1_k127_6532578_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 304.0
PJD1_k127_6532578_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000242 132.0
PJD1_k127_6532578_2 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.000000003101 57.0
PJD1_k127_6535125_0 PFAM Peptidase M16 inactive domain K07263 - - 0.0 1011.0
PJD1_k127_6535138_0 TrkA-C domain K11105 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007193 572.0
PJD1_k127_6535138_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002574 269.0
PJD1_k127_6535138_2 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000000009094 167.0
PJD1_k127_6535138_3 - - - - 0.00000000000000000000000000000000000000000003081 168.0
PJD1_k127_6536574_0 CarboxypepD_reg-like domain K02014,K16089 - - 3.637e-246 773.0
PJD1_k127_6536574_1 cytochrome C peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007591 303.0
PJD1_k127_6538243_0 ribonuclease inhibitor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000038 296.0
PJD1_k127_6538243_1 HlyD membrane-fusion protein of T1SS - - - 0.0000000000000000000000000000000000000004635 156.0
PJD1_k127_6552272_0 Two component regulator propeller K00936 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004793 338.0
PJD1_k127_6577046_0 PFAM Coenzyme A transferase K01027,K01028,K01031,K01034 - 2.8.3.5,2.8.3.6,2.8.3.8,2.8.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 414.0
PJD1_k127_6577046_1 PFAM Coenzyme A transferase K01029,K01032 - 2.8.3.5,2.8.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000629 252.0
PJD1_k127_6579494_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 9.489e-262 814.0
PJD1_k127_6579494_1 CHRD domain - - - 0.000000000000000000000000003559 118.0
PJD1_k127_6589839_0 iron-sulfur cluster-binding protein K18929 - - 1.033e-227 712.0
PJD1_k127_6589839_1 Protein of unknown function (DUF3109) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 319.0
PJD1_k127_6589839_2 Tellurite resistance protein TehB - - - 0.0000000003479 67.0
PJD1_k127_6589839_3 tetratricopeptide repeat - - - 0.000001143 59.0
PJD1_k127_661331_0 extracellular matrix structural constituent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 446.0
PJD1_k127_661331_1 tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000004589 231.0
PJD1_k127_661979_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 429.0
PJD1_k127_661979_1 Pfam DinB family - - - 0.00000000000000000000000000000000000000000000000000001042 193.0
PJD1_k127_661979_2 Cys/Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.000000001481 60.0
PJD1_k127_6624348_0 Starch-binding associating with outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007971 523.0
PJD1_k127_6624348_1 TonB-linked outer membrane protein, SusC RagA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006026 439.0
PJD1_k127_6642177_0 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000949 186.0
PJD1_k127_6642177_1 Domain of unknown function (DUF3472) - - - 0.0000000000000000000000000000003863 124.0
PJD1_k127_6642177_2 Rhodanese Homology Domain - - - 0.0000000000000001856 92.0
PJD1_k127_6642177_3 rhodanese-related sulfurtransferase K01011 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.8.1.1,2.8.1.2 0.00009741 54.0
PJD1_k127_6645677_0 TonB-dependent receptor - - - 0.00000000000000000000000000000003093 128.0
PJD1_k127_6645677_1 Helix-turn-helix domain - - - 0.0000000000000000000000003783 115.0
PJD1_k127_6652750_0 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 8.438e-198 624.0
PJD1_k127_6652750_1 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 329.0
PJD1_k127_6652750_2 Domain of unknown function (DUF4271) - - - 0.00000000000000000000000000000000000000000000002336 175.0
PJD1_k127_6652750_3 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.00000000000000000000005392 99.0
PJD1_k127_6676184_0 PUA domain containing protein K06969 - 2.1.1.191 9.645e-201 630.0
PJD1_k127_6676184_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 1.383e-195 615.0
PJD1_k127_6676184_2 transcriptional regulator K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 434.0
PJD1_k127_6676184_3 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000004359 218.0
PJD1_k127_6690535_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000009946 163.0
PJD1_k127_6696272_0 drug metabolite-transporting permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008633 388.0
PJD1_k127_6696272_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 301.0
PJD1_k127_6696272_2 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000033 139.0
PJD1_k127_6699922_0 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 536.0
PJD1_k127_6699922_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.000000000007597 67.0
PJD1_k127_6714804_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 368.0
PJD1_k127_6717703_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 422.0
PJD1_k127_6718944_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 385.0
PJD1_k127_6718944_1 Nucleoside K03289,K11537 - - 0.0000000000000000000000000000000000000000000000000000000000000009162 220.0
PJD1_k127_6718944_2 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000000000003052 209.0
PJD1_k127_6719624_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 325.0
PJD1_k127_6719624_1 Belongs to the UPF0312 family - - - 0.000000000000000000081 96.0
PJD1_k127_6719624_2 tRNA_anti-like - - - 0.0002005 53.0
PJD1_k127_6735547_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 595.0
PJD1_k127_6735547_1 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 315.0
PJD1_k127_6776277_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 332.0
PJD1_k127_6785405_0 2-methylthioadenine synthetase K18707 - 2.8.4.5 4.964e-217 678.0
PJD1_k127_6788090_0 Belongs to the MurCDEF family K03802 - 6.3.2.29,6.3.2.30 3.596e-207 651.0
PJD1_k127_6788090_1 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000001211 122.0
PJD1_k127_6788090_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000005738 73.0
PJD1_k127_6804657_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 6.993e-231 718.0
PJD1_k127_6804657_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000001558 68.0
PJD1_k127_6814142_0 PFAM Helicase conserved C-terminal domain K08282 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 469.0
PJD1_k127_6814142_1 receptor - - - 0.0000000000000000000000000000000000000000000000000000000002032 210.0
PJD1_k127_6826506_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 3.754e-194 608.0
PJD1_k127_6826506_1 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006592 596.0
PJD1_k127_6826506_10 unfolded protein binding K06142 - - 0.000000000000000000000000000007258 125.0
PJD1_k127_6826506_11 - - - - 0.00000000000000000000000308 104.0
PJD1_k127_6826506_12 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000002873 95.0
PJD1_k127_6826506_13 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000000006336 86.0
PJD1_k127_6826506_2 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007719 445.0
PJD1_k127_6826506_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004222 422.0
PJD1_k127_6826506_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 357.0
PJD1_k127_6826506_5 Glutathione peroxidase K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000001512 257.0
PJD1_k127_6826506_6 outer membrane chaperone Skp (OmpH) K06142 - - 0.00000000000000000000000000000000000000000000000000000000000000000002197 236.0
PJD1_k127_6826506_7 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000000000004265 233.0
PJD1_k127_6826506_8 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000004864 172.0
PJD1_k127_6826506_9 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000000000000005048 143.0
PJD1_k127_6835099_0 Protein of unknown function (DUF4256) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 308.0
PJD1_k127_6835099_1 PhnA protein K06193 - - 0.0000000000000000000000000000000000000000000000000000000000000000001415 235.0
PJD1_k127_6835099_2 CYTH - - - 0.000000000000000000000000000000000000000000000000000000000000000006121 229.0
PJD1_k127_6835099_3 DinB family - - - 0.0000000000000000000000000000000000000000000000000000000003766 205.0
PJD1_k127_6835099_4 Domain of unknown function (DU1801) - - - 0.000000000000001047 80.0
PJD1_k127_6835099_5 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.000000001593 59.0
PJD1_k127_6835099_6 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.000000009679 57.0
PJD1_k127_6849437_0 Outer membrane protein assembly complex, YaeT protein K07277 - - 2.298e-241 761.0
PJD1_k127_6849437_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 415.0
PJD1_k127_6861309_0 SNF2 family N-terminal domain K08282 - 2.7.11.1 2.05e-296 923.0
PJD1_k127_6872800_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 9.302e-212 664.0
PJD1_k127_6872800_1 Haem-binding domain - - - 0.000000000000000000000000000000000000000001451 159.0
PJD1_k127_6876630_0 CHAT domain - - - 5.882e-250 802.0
PJD1_k127_6878625_0 Protein of unknown function (DUF2723) - - - 2.986e-228 724.0
PJD1_k127_6878625_1 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000863 554.0
PJD1_k127_6883586_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000537 358.0
PJD1_k127_6883586_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 332.0
PJD1_k127_6883586_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000579 224.0
PJD1_k127_6883586_3 Belongs to the PdxA family K00097 - 1.1.1.262 0.000000000248 61.0
PJD1_k127_6896303_0 Histidine kinase - - - 0.00000000000000000000000000000000000000005488 157.0
PJD1_k127_6896303_1 - - - - 0.000000000000000000001181 99.0
PJD1_k127_6903582_0 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.0000000000000000000000000000000000000000000000000000000000532 211.0
PJD1_k127_6903582_1 L,D-transpeptidase catalytic domain K21470 - - 0.0000000000000002142 87.0
PJD1_k127_6919442_0 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009519 472.0
PJD1_k127_6920231_0 transport system involved in gliding motility, auxiliary component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008842 490.0
PJD1_k127_6920231_1 Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 440.0
PJD1_k127_6920231_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008891 365.0
PJD1_k127_6924381_0 Peptidase family C25 - - - 2.056e-233 735.0
PJD1_k127_6924381_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 491.0
PJD1_k127_6924381_2 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000004551 243.0
PJD1_k127_6924381_3 Domain of unknown function (DUF4292) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002723 246.0
PJD1_k127_6924381_4 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000009645 203.0
PJD1_k127_6924381_5 Peptidase, M23 - - - 0.000000000000000000000000000005506 123.0
PJD1_k127_6933581_0 COGs COG4775 Outer membrane protein protective antigen OMA87 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 605.0
PJD1_k127_6933581_1 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000099 477.0
PJD1_k127_6933581_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006548 470.0
PJD1_k127_6933581_3 Biotin-lipoyl like K02005 - - 0.00000000000000000000000000000000000006997 145.0
PJD1_k127_6940724_0 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762,K13421 - 2.4.2.10,4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 331.0
PJD1_k127_6940724_1 Belongs to the Nudix hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000008681 236.0
PJD1_k127_6940724_2 mercury ion transmembrane transporter activity K08364 - - 0.0000000000000000000000000000004404 126.0
PJD1_k127_6940724_3 PFAM thioesterase superfamily protein K19222 - 3.1.2.28 0.00000000001648 64.0
PJD1_k127_6944054_0 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 597.0
PJD1_k127_6944054_1 2'-5' RNA ligase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002169 254.0
PJD1_k127_6944054_2 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000002664 64.0
PJD1_k127_6947663_0 calcium- and calmodulin-responsive adenylate cyclase activity K01406 - 3.4.24.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 436.0
PJD1_k127_6947663_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 309.0
PJD1_k127_6947663_2 Ribonuclease H-like K09776 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006516 301.0
PJD1_k127_6947663_3 Protein of unknown function (DUF998) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008385 262.0
PJD1_k127_6947663_4 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001909 263.0
PJD1_k127_6947663_5 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008334 256.0
PJD1_k127_6947672_0 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000513 267.0
PJD1_k127_6947672_1 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000003978 214.0
PJD1_k127_6961709_0 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005101 480.0
PJD1_k127_6961709_1 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 343.0
PJD1_k127_696557_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 563.0
PJD1_k127_696557_1 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000007943 158.0
PJD1_k127_696557_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000008077 132.0
PJD1_k127_696557_3 Von Willebrand factor A - - - 0.0004756 52.0
PJD1_k127_6965944_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 599.0
PJD1_k127_6965944_1 Beta-eliminating lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 325.0
PJD1_k127_6965944_2 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002244 271.0
PJD1_k127_6965944_3 - - - - 0.00000000000000000000000000000000000000008806 154.0
PJD1_k127_6966413_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 1.084e-209 655.0
PJD1_k127_6972553_0 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001658 280.0
PJD1_k127_6972553_1 Glycosyl transferase, family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000004642 220.0
PJD1_k127_6981473_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 4.291e-307 955.0
PJD1_k127_698298_0 fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004766 505.0
PJD1_k127_698298_1 catechol 1,2-dioxygenase K03381 - 1.13.11.1 0.0007687 49.0
PJD1_k127_6986026_0 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 0.0 1062.0
PJD1_k127_6986026_1 COG1024 Enoyl-CoA hydratase carnithine racemase K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 338.0
PJD1_k127_6986026_3 - - - - 0.000001808 57.0
PJD1_k127_6986026_4 - - - - 0.000003041 56.0
PJD1_k127_6986026_5 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 0.00004694 49.0
PJD1_k127_6987433_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 413.0
PJD1_k127_6987433_1 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000001218 108.0
PJD1_k127_699085_0 chelatase, subunit chli K07391 - - 1.181e-260 810.0
PJD1_k127_699085_1 PFAM Peptidase M1 membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007643 559.0
PJD1_k127_7012409_0 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 3.756e-280 878.0
PJD1_k127_7012409_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 577.0
PJD1_k127_7012409_2 Methylase involved in ubiquinone menaquinone biosynthesis K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 390.0
PJD1_k127_7012409_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 366.0
PJD1_k127_7012409_4 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000001008 246.0
PJD1_k127_7012409_5 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104,K03325,K03741,K03892,K18701 - 1.20.4.1,2.8.4.2,3.1.3.48 0.00000000000000000000000000000000000000000000000000000000001922 209.0
PJD1_k127_7012409_6 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000005135 164.0
PJD1_k127_7024510_0 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 4.742e-214 668.0
PJD1_k127_7030416_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000013 199.0
PJD1_k127_7030416_1 hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000002675 145.0
PJD1_k127_7030416_2 D-alanyl-D-alanine carboxypeptidase - - - 0.000000000000009035 78.0
PJD1_k127_7030416_3 Domain of unknown function (DUF4476) - - - 0.0002472 52.0
PJD1_k127_7031629_0 PFAM PspC domain K03973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003792 549.0
PJD1_k127_7031629_1 Transcriptional regulator K10947 - - 0.0000000000000000000000000000000000000000000000000000000001038 205.0
PJD1_k127_7034765_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 8.456e-210 664.0
PJD1_k127_7034765_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 335.0
PJD1_k127_7034765_2 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 308.0
PJD1_k127_7034765_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001766 263.0
PJD1_k127_7034765_4 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000358 247.0
PJD1_k127_7034765_5 Acyl-coA-binding protein - - - 0.00000000000000000000000000001014 119.0
PJD1_k127_703588_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 396.0
PJD1_k127_703588_1 Protein of Unknown function (DUF2784) - - - 0.0000000000000000000000000000000000000000489 155.0
PJD1_k127_7036559_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 590.0
PJD1_k127_7036559_1 Cell division protein K03589 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003046 278.0
PJD1_k127_7036559_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000009813 229.0
PJD1_k127_7036559_3 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000003101 196.0
PJD1_k127_703885_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 5.546e-235 730.0
PJD1_k127_7061277_0 ABC-type multidrug transport system ATPase component K19340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 327.0
PJD1_k127_7061277_1 nitrous oxide K19341 - - 0.00000000000000000000000000000000000000000000000000000005347 199.0
PJD1_k127_7061277_2 PFAM Periplasmic copper-binding protein (NosD) K07218 - - 0.00000000000000000000000000000000000009963 142.0
PJD1_k127_7062764_0 TIGRFAM hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 323.0
PJD1_k127_7062764_1 COGs COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 308.0
PJD1_k127_7062764_2 Raf kinase inhibitor-like protein K06910 - - 0.00000000000000000000000000000000000000000000000000001873 192.0
PJD1_k127_7062764_3 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000000000000003466 96.0
PJD1_k127_7062764_4 - - - - 0.00000005617 56.0
PJD1_k127_7063023_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.222e-296 912.0
PJD1_k127_7063023_1 ATP synthase K02114 - - 0.00000000000000000000000000000003296 127.0
PJD1_k127_7063023_2 WG containing repeat - - - 0.0000000000007676 70.0
PJD1_k127_7063023_3 Protein of unknown function (DUF4197) - - - 0.00003364 46.0
PJD1_k127_7069391_0 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004975 525.0
PJD1_k127_7069391_1 TonB-dependent receptor - - - 0.0000000000008461 70.0
PJD1_k127_7074203_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 3.722e-210 658.0
PJD1_k127_7074203_1 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 292.0
PJD1_k127_7074203_2 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000004135 242.0
PJD1_k127_7087463_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 578.0
PJD1_k127_7087463_1 Transcriptional regulatory protein, C terminal K07667 - - 0.000000000000000000000000000000000000000002261 158.0
PJD1_k127_7088648_0 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 384.0
PJD1_k127_7088648_1 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 285.0
PJD1_k127_7088648_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 284.0
PJD1_k127_7088648_3 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.00000000000000000000000000000001402 126.0
PJD1_k127_7090883_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 4.616e-199 626.0
PJD1_k127_7090883_1 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 300.0
PJD1_k127_7090883_2 membrane protein required for spore maturation in B.subtilis K06373 - - 0.00000000000000000000000000000000000000001447 156.0
PJD1_k127_7092438_0 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000001266 163.0
PJD1_k127_7092438_1 Beta-lactamase class C and other penicillin binding - - - 0.0000000000000000000000000009943 113.0
PJD1_k127_7092438_2 Cytochrome c - - - 0.000000000000001189 81.0
PJD1_k127_7103109_0 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 597.0
PJD1_k127_7108514_0 Acyl carrier protein phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000001078 226.0
PJD1_k127_7108514_1 alpha beta K06889 - - 0.000000000000000000000000000001136 124.0
PJD1_k127_7134269_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.812e-265 820.0
PJD1_k127_714845_0 Gaf domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 351.0
PJD1_k127_7152833_0 Transcriptional regulator, AraC family - - - 0.0000000000000000000000000000000000000000000000000000297 193.0
PJD1_k127_7152833_1 Heavy-metal-associated domain - - - 0.0000000000000000000000000000000000000001931 156.0
PJD1_k127_7153506_0 metallopeptidase activity K01337 - 3.4.21.50 0.00000000000000000000000000000000000000000000969 183.0
PJD1_k127_7153506_1 PKD domain containing protein - - - 0.000000000000000000000000000005807 120.0
PJD1_k127_719287_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000007407 231.0
PJD1_k127_719287_1 Beta-lactamase class C and other penicillin binding K01286 - 3.4.16.4 0.0000000000000000000000000003558 116.0
PJD1_k127_719483_0 Orotidine 5''-phosphate decarboxylase K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 399.0
PJD1_k127_719483_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004086 285.0
PJD1_k127_719483_2 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000001005 256.0
PJD1_k127_719483_3 PFAM RNA polymerase sigma factor 70, region 4 type 2 K03088 - - 0.000000000000000000000000000000000000000000000000000000000008779 212.0
PJD1_k127_719483_4 acyl-CoA dehydrogenase K00252 - 1.3.8.6 0.0000000000000000000000003956 104.0
PJD1_k127_719483_5 - - - - 0.000000000000000000005924 100.0
PJD1_k127_719483_6 acyl-CoA dehydrogenase K00252 - 1.3.8.6 0.0000000007831 61.0
PJD1_k127_7221808_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 330.0
PJD1_k127_7221808_1 metallophosphoesterase - - - 0.00000000000000000000002266 101.0
PJD1_k127_722594_0 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 368.0
PJD1_k127_722594_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 332.0
PJD1_k127_722594_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 313.0
PJD1_k127_7243841_0 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008602 323.0
PJD1_k127_7243841_1 COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 285.0
PJD1_k127_7243841_2 Belongs to the peptidase M16 family K07263 - - 0.000000005706 59.0
PJD1_k127_7245672_1 Conserved repeat domain - - - 0.0000000000000000000006299 111.0
PJD1_k127_7248046_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 593.0
PJD1_k127_7248046_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 512.0
PJD1_k127_725099_0 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007032 546.0
PJD1_k127_7265379_0 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 568.0
PJD1_k127_7265379_1 Metallo-peptidase family M12 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 313.0
PJD1_k127_7265379_3 peptidyl-tyrosine sulfation - - - 0.00000000000377 70.0
PJD1_k127_7271024_0 alginic acid biosynthetic process - - - 0.000000000000000003975 97.0
PJD1_k127_7272307_0 Inner membrane protein CreD K06143 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 340.0
PJD1_k127_7272307_1 hemolysin activation secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003825 293.0
PJD1_k127_7272307_2 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000001532 219.0
PJD1_k127_7272307_3 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000001795 171.0
PJD1_k127_7274349_0 Belongs to the aldehyde dehydrogenase family K10217 - 1.2.1.32,1.2.1.85 7.256e-217 682.0
PJD1_k127_7274349_1 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000003762 169.0
PJD1_k127_7274349_2 Translation initiation inhibitor, yjgF family K15067 - 3.5.99.5 0.00000000000000001933 83.0
PJD1_k127_7294085_0 Outer membrane protein beta-barrel family - - - 5.894e-224 719.0
PJD1_k127_7294085_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002766 278.0
PJD1_k127_7294085_2 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000005293 178.0
PJD1_k127_7325908_0 SRPBCC domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000005257 219.0
PJD1_k127_7325908_1 Belongs to the ompA family K03286 - - 0.0000000000000001559 79.0
PJD1_k127_7325908_3 protein transport - - - 0.00008326 45.0
PJD1_k127_7333858_0 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002801 338.0
PJD1_k127_7333858_1 - - - - 0.000000000000000000000000000000000000000000000000000000004284 207.0
PJD1_k127_7347890_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000004411 105.0
PJD1_k127_7352449_0 HmuY protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 353.0
PJD1_k127_7361150_0 PFAM sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 308.0
PJD1_k127_7361150_1 Phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.00000000000001061 77.0
PJD1_k127_7368950_0 DNA helicase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 310.0
PJD1_k127_7368950_1 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000004392 249.0
PJD1_k127_7368950_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000004758 217.0
PJD1_k127_7368950_3 cheY-homologous receiver domain - - - 0.000000004148 57.0
PJD1_k127_7370179_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 601.0
PJD1_k127_7373653_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1096.0
PJD1_k127_7379711_0 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 281.0
PJD1_k127_7379711_1 Protein of unknown function (DUF4255) - - - 0.00000000000000000000000000000007745 132.0
PJD1_k127_7379711_2 helix_turn_helix, Lux Regulon - - - 0.000000002078 65.0
PJD1_k127_7379711_3 - - - - 0.000001543 59.0
PJD1_k127_7379711_4 - - - - 0.0005558 48.0
PJD1_k127_7385805_0 O-Antigen ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008503 280.0
PJD1_k127_7385805_1 Transcriptional regulator, asnc family K03718 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001043 252.0
PJD1_k127_7387421_0 Heat shock protein Hsp90 K04079 - - 2.637e-255 795.0
PJD1_k127_7387421_1 NTPase K06928 - 3.6.1.15 0.000000000000000000000001964 114.0
PJD1_k127_7391801_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 1.006e-205 651.0
PJD1_k127_7391801_1 serine-type endopeptidase activity K04771 - 3.4.21.107 0.000000000000000000000000000000005303 134.0
PJD1_k127_7391801_2 Domain of unknown function (DUF4369) - - - 0.00000000000000001128 86.0
PJD1_k127_7404350_0 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 428.0
PJD1_k127_7404350_1 GAF domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005399 324.0
PJD1_k127_7404350_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000001886 148.0
PJD1_k127_7404350_3 phosphorelay signal transduction system - - - 0.00000000000000000000000000007657 118.0
PJD1_k127_7404350_4 cheY-homologous receiver domain - - - 0.000000000000000000000003729 106.0
PJD1_k127_7404350_5 Belongs to the thioredoxin family - - - 0.000000000001364 68.0
PJD1_k127_7450539_0 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 568.0
PJD1_k127_7450539_1 Glycosyl transferase, family 9 K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 451.0
PJD1_k127_7450539_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000943 283.0
PJD1_k127_7450539_3 ABC transporter K15738 - - 0.0000000000000000000000000003551 117.0
PJD1_k127_7450539_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000439 73.0
PJD1_k127_7450539_5 SNARE associated Golgi protein K03975 - - 0.000001232 50.0
PJD1_k127_7454308_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001198 267.0
PJD1_k127_7454308_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001343 250.0
PJD1_k127_7454308_2 Dodecin K09165 - - 0.000000000000000000000000001466 112.0
PJD1_k127_7467684_0 acyl-CoA dehydrogenase K00252 - 1.3.8.6 4.037e-210 654.0
PJD1_k127_7467684_1 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000000000000000000000000000002509 206.0
PJD1_k127_7467684_2 Two component regulator three Y - - - 0.0000000000000000000000007049 106.0
PJD1_k127_7467684_3 small membrane protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000003576 106.0
PJD1_k127_7470068_0 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 305.0
PJD1_k127_7470068_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001346 254.0
PJD1_k127_7470068_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000002462 243.0
PJD1_k127_7470068_3 PFAM NlpC P60 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001304 246.0
PJD1_k127_7470068_4 PFAM Cytidine and deoxycytidylate deaminase zinc-binding region K01487 - 3.5.4.3 0.00000000000000000000000000000000000000000000000000000000000001418 218.0
PJD1_k127_7470068_5 membrane transporter protein K07090 - - 0.000000000000000000000000000002628 126.0
PJD1_k127_7482322_0 Peptidase family M1 domain - - - 0.0 1195.0
PJD1_k127_7482322_1 esterase K01070 - 3.1.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007383 315.0
PJD1_k127_7482322_2 Sortilin, neurotensin receptor 3, - - - 0.000000000000000000000000000000000000000000000000000000000175 207.0
PJD1_k127_7482322_3 - - - - 0.0000000000000000000000000000000000000000000000000000006173 200.0
PJD1_k127_7485328_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006974 511.0
PJD1_k127_7485328_1 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 389.0
PJD1_k127_7486468_0 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003904 342.0
PJD1_k127_7486468_1 Protein of unknown function (DUF3098) - - - 0.000000000000000000000003718 104.0
PJD1_k127_7486468_2 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - 0.00000000000005077 73.0
PJD1_k127_748951_0 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 532.0
PJD1_k127_748994_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000471 498.0
PJD1_k127_748994_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005221 434.0
PJD1_k127_748994_2 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 356.0
PJD1_k127_748994_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000005503 219.0
PJD1_k127_748994_4 cytochrome complex assembly K02198,K02200,K04016,K04017,K04018 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0018193,GO:0018198,GO:0018378,GO:0019538,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098567,GO:1901564 - 0.0000000000000000000000000000000000000000000000001677 187.0
PJD1_k127_7507452_0 Peptidase family M1 domain - - - 4.491e-204 650.0
PJD1_k127_7507452_1 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 422.0
PJD1_k127_7517925_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 2.759e-216 673.0
PJD1_k127_7517925_1 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000003133 234.0
PJD1_k127_7517925_2 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000006071 209.0
PJD1_k127_7519109_0 Pfam:SusD K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 447.0
PJD1_k127_7519109_1 PFAM ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000003585 203.0
PJD1_k127_7528200_0 PFAM Polysulphide reductase, NrfD K00185 - - 5.117e-289 890.0
PJD1_k127_7528200_1 Oxidoreductase K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 376.0
PJD1_k127_7528200_2 Quinol cytochrome c oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007467 326.0
PJD1_k127_7528200_3 cytochrome C - - - 0.000000000000000000000000000000000000000000000000000000000000000002372 232.0
PJD1_k127_7531394_0 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000749 240.0
PJD1_k127_7531394_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.00000000000000000000000000000000000000003562 153.0
PJD1_k127_7565765_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1083.0
PJD1_k127_7565765_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0000000000000000000000000000000000000002356 149.0
PJD1_k127_756618_0 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 477.0
PJD1_k127_756618_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009341 455.0
PJD1_k127_758067_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 3.101e-262 818.0
PJD1_k127_758412_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.318e-303 934.0
PJD1_k127_758412_1 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000000000000000002652 222.0
PJD1_k127_7596396_0 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000001224 254.0
PJD1_k127_7596396_1 cellulase activity - - - 0.0000000231 67.0
PJD1_k127_7608663_0 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009582 383.0
PJD1_k127_7613068_0 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000001946 104.0
PJD1_k127_7613068_1 CHAT domain - - - 0.000000000000000000002427 110.0
PJD1_k127_7615293_0 peptidase S9 prolyl oligopeptidase active site domain protein - - - 7.848e-293 929.0
PJD1_k127_7615293_1 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008242 385.0
PJD1_k127_7615293_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 354.0
PJD1_k127_7615293_3 PFAM EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 357.0
PJD1_k127_7615293_4 cyclopropane-fatty-acyl-phospholipid synthase K20444 - - 0.000000000000000000000000000000000000000000000000000000000000002729 227.0
PJD1_k127_7618640_0 Glycosyl hydrolases family 2, TIM barrel domain K01190 - 3.2.1.23 1.147e-218 688.0
PJD1_k127_7618640_1 Outer membrane protein SusF_SusE K21571 - - 0.000000000000000000000000000000000000000000000000000001771 198.0
PJD1_k127_7635595_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 394.0
PJD1_k127_7635595_1 PFAM Biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000001425 229.0
PJD1_k127_7635595_2 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000000000000002666 184.0
PJD1_k127_7635595_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000006758 93.0
PJD1_k127_7636312_0 Protein of unknown function (DUF3078) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 371.0
PJD1_k127_7636312_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004317 244.0
PJD1_k127_7640784_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 564.0
PJD1_k127_7640784_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000006333 83.0
PJD1_k127_7659120_0 Peptidase S16 lon domain protein K01338,K07157 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009649 299.0
PJD1_k127_7659120_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000002574 134.0
PJD1_k127_7659120_2 PFAM Glycosyl transferase family 2 - - - 0.00005644 45.0
PJD1_k127_7661656_0 regulator of chromosome condensation, RCC1 - - - 0.00000000000000000000007541 105.0
PJD1_k127_7661656_1 - - - - 0.0000000000002258 81.0
PJD1_k127_767807_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 320.0
PJD1_k127_767807_1 Histidine kinase - - - 0.00000000000002366 77.0
PJD1_k127_767807_2 NmrA-like family - - - 0.00000002248 56.0
PJD1_k127_7683060_0 Bacterial protein of unknown function (DUF853) K06915 - - 7.086e-226 706.0
PJD1_k127_7683060_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 400.0
PJD1_k127_7704276_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 5.072e-220 692.0
PJD1_k127_7704276_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 490.0
PJD1_k127_7705926_0 Oxidoreductase FAD-binding domain K02613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 452.0
PJD1_k127_7705926_1 Transcriptional regulator, TetR family - - - 0.00000000000000000000000000000000000000000000000000000000000001308 221.0
PJD1_k127_7705926_2 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.000000000000000000000000000000000000000000000003877 173.0
PJD1_k127_7706223_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 9.831e-209 653.0
PJD1_k127_7706223_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000002953 160.0
PJD1_k127_7706223_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000001792 158.0
PJD1_k127_7713618_0 Organic solvent tolerance protein OstA - - - 9.826e-278 884.0
PJD1_k127_7713618_1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 319.0
PJD1_k127_7713618_2 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007347 324.0
PJD1_k127_7713618_3 Acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 287.0
PJD1_k127_7713618_4 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.000000000000000815 78.0
PJD1_k127_7723118_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 7.784e-271 852.0
PJD1_k127_7723118_1 Damage-inducible protein DinB - - - 0.000000000000000000000000000000000000000000000005497 177.0
PJD1_k127_7723118_2 - - - - 0.00000000000009751 73.0
PJD1_k127_773235_0 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 410.0
PJD1_k127_773235_1 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 0.000000000000000002046 87.0
PJD1_k127_7740641_0 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000006227 160.0
PJD1_k127_7740641_1 SprB repeat - - - 0.000000000000000000000000000000000000002996 160.0
PJD1_k127_7751567_0 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009335 384.0
PJD1_k127_7751567_1 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007689 325.0
PJD1_k127_7754885_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 1.095e-229 715.0
PJD1_k127_7754885_1 PFAM SprT-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002136 252.0
PJD1_k127_7754885_2 Acetyltransferase (GNAT) domain K03828 - - 0.0000000000000000000000000000000000000000000000000000000000000000001812 232.0
PJD1_k127_7754885_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000003494 185.0
PJD1_k127_7754885_4 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000000000000002288 168.0
PJD1_k127_7754885_5 Tetratricopeptide repeat protein - - - 0.000000000000000000000000000000000000000000006974 167.0
PJD1_k127_7754885_6 peptidase M23 - - - 0.00000000000000000000000000000000000002711 147.0
PJD1_k127_7754885_7 heme binding - - - 0.00000000000000256 85.0
PJD1_k127_7756763_0 Peptidase family M28 K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 341.0
PJD1_k127_7756763_1 Peptidase family M28 K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000002291 166.0
PJD1_k127_7757193_0 Glycosyl hydrolases family 2, TIM barrel domain K01190 - 3.2.1.23 1.153e-290 900.0
PJD1_k127_7757193_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 335.0
PJD1_k127_7778024_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 517.0
PJD1_k127_7779073_0 Domain of unknown function (DUF4010) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 376.0
PJD1_k127_7779073_1 Sortilin, neurotensin receptor 3, - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 325.0
PJD1_k127_7779073_2 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002738 280.0
PJD1_k127_7782410_0 NAD-dependent epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 393.0
PJD1_k127_7782410_1 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 318.0
PJD1_k127_7802100_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 2.951e-284 884.0
PJD1_k127_7812320_0 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 349.0
PJD1_k127_7827916_0 COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit K02621 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 381.0
PJD1_k127_7827916_1 - - - - 0.0000000000000000000000000001578 117.0
PJD1_k127_7830331_0 PKD domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001265 263.0
PJD1_k127_7830331_1 Gliding motility protein - - - 0.0000000002588 74.0
PJD1_k127_7832670_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 5.168e-250 777.0
PJD1_k127_7832670_1 PFAM Cytochrome c assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 352.0
PJD1_k127_7832670_3 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.0006911 42.0
PJD1_k127_7844354_0 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 606.0
PJD1_k127_7844354_1 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 451.0
PJD1_k127_7844354_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000001629 136.0
PJD1_k127_7844354_3 - - - - 0.00000000000000000000000000237 122.0
PJD1_k127_7864473_0 Peptidase, M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006591 584.0
PJD1_k127_7866858_0 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000006357 250.0
PJD1_k127_7868068_0 Prolyl oligopeptidase family - - - 4.607e-229 717.0
PJD1_k127_7868068_1 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 308.0
PJD1_k127_7868444_0 protein related to plant photosystem II stability assembly factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 346.0
PJD1_k127_7873602_0 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000000000002141 208.0
PJD1_k127_7873602_1 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000002604 168.0
PJD1_k127_7873602_2 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000001199 145.0
PJD1_k127_7875110_0 Motility related/secretion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005512 555.0
PJD1_k127_7876590_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 8.296e-238 741.0
PJD1_k127_7876590_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 427.0
PJD1_k127_7876590_2 TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001521 258.0
PJD1_k127_7876590_3 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000000000000000000000000000000002183 178.0
PJD1_k127_7876590_4 Putative auto-transporter adhesin, head GIN domain - - - 0.0000000000000000000000000000000000000000000006312 174.0
PJD1_k127_7882452_0 GSCFA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 429.0
PJD1_k127_7882452_1 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 331.0
PJD1_k127_7882452_2 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0000000000000005853 78.0
PJD1_k127_7884770_0 COG0277 FAD FMN-containing dehydrogenases - - - 5.783e-203 642.0
PJD1_k127_7884770_1 PDZ domain (Also known as DHR or GLGF) K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 381.0
PJD1_k127_7884770_2 COG0642 Signal transduction histidine kinase - - - 0.0000000000000001911 79.0
PJD1_k127_7891448_0 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 317.0
PJD1_k127_7891448_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000000000006327 190.0
PJD1_k127_7891448_2 Electron transfer flavoprotein K03522 - - 0.000000000000000003286 83.0
PJD1_k127_7894698_0 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 559.0
PJD1_k127_7894698_1 PFAM Peptidase family M20 M25 M40 K01436 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 547.0
PJD1_k127_7894698_2 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004383 268.0
PJD1_k127_7894698_3 PFAM polysaccharide biosynthesis protein K03328 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001003 273.0
PJD1_k127_7894698_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.000000000000000000000000000000000000001659 152.0
PJD1_k127_7894698_5 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000007104 135.0
PJD1_k127_7894698_6 FeoA K04758 - - 0.0000000000000000000000002493 108.0
PJD1_k127_7901492_0 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036 320.0
PJD1_k127_7901492_1 COG1226 Kef-type K transport systems K10716 - - 0.000000000000000000000000000000000000000000000000000000000000002735 224.0
PJD1_k127_7902161_0 COGs COG1253 Hemolysins and related protein containing CBS domains K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008856 397.0
PJD1_k127_7902161_1 Thiopurine S-methyltransferase (TPMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 314.0
PJD1_k127_7902161_2 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 0.000000003847 60.0
PJD1_k127_7905266_0 PFAM Formylglycine-generating sulfatase enzyme - - - 6.179e-217 681.0
PJD1_k127_7905266_1 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 287.0
PJD1_k127_7906876_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.305e-204 638.0
PJD1_k127_7910474_0 acr, cog1399 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001498 277.0
PJD1_k127_7910474_1 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000002229 108.0
PJD1_k127_7910474_2 Protein of unknown function (DUF3810) - - - 0.0000000000000000079 87.0
PJD1_k127_81687_0 Peptidase family M13 K07386 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009082 507.0
PJD1_k127_81687_1 Mandelate racemase muconate lactonizing enzyme K01776,K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20,5.1.1.3 0.00000000000000000000004746 99.0
PJD1_k127_820869_0 - - - - 1.687e-201 639.0
PJD1_k127_820869_1 COG0076 Glutamate decarboxylase and related PLP-dependent - - - 0.0000000000000000001282 90.0
PJD1_k127_825453_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 329.0
PJD1_k127_825453_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.00000000000000000000000000000000000000000000000000886 182.0
PJD1_k127_825453_2 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000005165 98.0
PJD1_k127_831743_0 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 543.0
PJD1_k127_831743_1 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000001093 245.0
PJD1_k127_831743_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000006366 196.0
PJD1_k127_831743_3 - - - - 0.00000000000000008439 85.0
PJD1_k127_832626_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005786 363.0
PJD1_k127_832626_1 Macrocin-O-methyltransferase (TylF) - - - 0.0000000000000000000000000000000000000000000000000002046 188.0
PJD1_k127_832626_2 glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000000000000000335 150.0
PJD1_k127_839556_0 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000669 261.0
PJD1_k127_839556_1 Metal-dependent hydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000008114 234.0
PJD1_k127_839556_2 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000001279 214.0
PJD1_k127_842765_0 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005338 344.0
PJD1_k127_842765_1 Protein of unknown function (DUF420) K08976 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002806 248.0
PJD1_k127_877666_0 Belongs to the DEAD box helicase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 599.0
PJD1_k127_877666_1 N-acetylmuramoyl-L-alanine amidase K01447,K11066 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000001418 246.0
PJD1_k127_877666_2 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.000000000000000000000000000000000000000000000007854 172.0
PJD1_k127_89467_0 lipoprotein involved in nitrous oxide reduction K19342 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002665 255.0
PJD1_k127_89467_1 Nitrous oxide reductase K00376 - 1.7.2.4 0.000000000000000000000000000000000000000000000005428 173.0
PJD1_k127_901317_0 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001129 246.0
PJD1_k127_901317_1 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000000000000006073 200.0
PJD1_k127_901317_2 Glycosyl transferases group 1 - - - 0.0000007014 52.0
PJD1_k127_903726_0 oxidoreductase activity - - - 0.000004065 59.0
PJD1_k127_918991_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 6.329e-303 936.0
PJD1_k127_918991_1 Purine-nucleoside phosphorylase K03784 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000003199 264.0
PJD1_k127_941971_0 ribonuclease, Rne Rng family K08301 - - 3.775e-283 875.0
PJD1_k127_941971_1 PFAM Peptidase, membrane zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008017 318.0
PJD1_k127_941971_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001757 280.0
PJD1_k127_941971_3 - - - - 0.0000003779 53.0
PJD1_k127_94468_0 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 285.0
PJD1_k127_94468_1 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000000000000000000007008 171.0
PJD1_k127_964929_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 9.846e-312 964.0
PJD1_k127_965748_0 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 352.0
PJD1_k127_965748_1 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00826,K02619 - 2.6.1.42,4.1.3.38 0.000000000000000000000000000000000000000000000000000000345 202.0
PJD1_k127_967367_0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 437.0
PJD1_k127_978785_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.168e-282 880.0
PJD1_k127_978785_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 295.0
PJD1_k127_979896_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 494.0
PJD1_k127_979896_1 phosphohydrolase K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 424.0
PJD1_k127_980337_0 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000961 523.0
PJD1_k127_980337_1 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000005113 218.0
PJD1_k127_980744_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 404.0
PJD1_k127_980744_1 COG1226 Kef-type K transport systems K10716 - - 0.00000000000000000000000000000000000000000000000000005039 195.0
PJD1_k127_980744_2 - - - - 0.0000000003705 66.0
PJD1_k127_997110_0 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000734 418.0