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Overview

ID MAG02889
Name PJD1_bin.62
Sample SMP0067
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Thermoanaerobaculia
Order Gp7-AA8
Family Gp7-AA8
Genus JAENWF01
Species
Assembly information
Completeness (%) 63.6
Contamination (%) 0.74
GC content (%) 64.0
N50 (bp) 11,073
Genome size (bp) 2,571,339

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2184

Gene name Description KEGG GOs EC E-value Score Sequence
PJD1_k127_107574_0 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 469.0
PJD1_k127_107574_1 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 411.0
PJD1_k127_107574_2 Domain of unknown function (DUF1972) K12996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 324.0
PJD1_k127_107574_3 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000004148 239.0
PJD1_k127_107574_4 Glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000000000000003243 190.0
PJD1_k127_107574_5 glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000000000005056 186.0
PJD1_k127_11004_0 Wzt C-terminal domain K09691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 335.0
PJD1_k127_11004_1 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000002008 224.0
PJD1_k127_11004_10 ABC-2 type transporter K09690 - - 0.000000000000000000000000001557 122.0
PJD1_k127_11004_11 Preprotein translocase SecG subunit K03075 - - 0.00000000000000000005605 93.0
PJD1_k127_11004_12 Integral membrane sensor hybrid histidine kinase - - - 0.000000000000000000333 93.0
PJD1_k127_11004_13 PFAM ASPIC UnbV domain protein - - - 0.00000000000000001788 96.0
PJD1_k127_11004_14 PFAM Glycosyl transferase family 2 K16870 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0045226,GO:0046379,GO:0071704,GO:0071944,GO:1901576 2.4.1.289 0.00000000000000009043 94.0
PJD1_k127_11004_15 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000001101 72.0
PJD1_k127_11004_16 - - - - 0.0000001197 55.0
PJD1_k127_11004_17 PFAM PKD domain containing protein - - - 0.0000005152 64.0
PJD1_k127_11004_18 Alternative locus ID K00748 - 2.4.1.182 0.00004346 49.0
PJD1_k127_11004_19 Tetratricopeptide repeats - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006996,GO:0007275,GO:0007368,GO:0007389,GO:0007423,GO:0007507,GO:0008150,GO:0009653,GO:0009790,GO:0009799,GO:0009855,GO:0009887,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0032474,GO:0032501,GO:0032502,GO:0042471,GO:0042472,GO:0043583,GO:0044085,GO:0044424,GO:0044464,GO:0044782,GO:0048513,GO:0048562,GO:0048568,GO:0048598,GO:0048731,GO:0048839,GO:0048840,GO:0048856,GO:0060271,GO:0061371,GO:0070925,GO:0071840,GO:0072359,GO:0090596,GO:0120031,GO:0120036 - 0.00008059 54.0
PJD1_k127_11004_2 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000006613 225.0
PJD1_k127_11004_20 Helix-turn-helix domain - - - 0.000164 49.0
PJD1_k127_11004_21 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0005471 52.0
PJD1_k127_11004_3 Glycosyl transferase family group 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000001366 212.0
PJD1_k127_11004_4 triosephosphate isomerase K01803 GO:0000768,GO:0003008,GO:0003674,GO:0003824,GO:0004807,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006949,GO:0007275,GO:0007520,GO:0007525,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009612,GO:0009628,GO:0009653,GO:0009987,GO:0010259,GO:0014902,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019674,GO:0019682,GO:0019693,GO:0019725,GO:0019751,GO:0019752,GO:0019899,GO:0030016,GO:0030017,GO:0030018,GO:0030154,GO:0031430,GO:0031625,GO:0031672,GO:0031674,GO:0032501,GO:0032502,GO:0032787,GO:0033500,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042592,GO:0042593,GO:0042692,GO:0042802,GO:0042803,GO:0042866,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043292,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044389,GO:0044422,GO:0044424,GO:0044444,GO:0044449,GO:0044464,GO:0045454,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0046983,GO:0048646,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050877,GO:0050896,GO:0051146,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061061,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0065007,GO:0065008,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0099080,GO:0099081,GO:0099512,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.000000000000000000000000000000000000000000000000000000789 200.0
PJD1_k127_11004_5 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000000000000000000484 195.0
PJD1_k127_11004_6 Bacterial lipid A biosynthesis acyltransferase - - - 0.00000000000000000000000000000000000000000000004676 185.0
PJD1_k127_11004_7 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000001584 179.0
PJD1_k127_11004_8 Glycosyltransferase like family 2 K07011,K13659 - 2.4.1.264 0.000000000000000000000000000000000000000000003428 181.0
PJD1_k127_11004_9 transferase activity, transferring acyl groups - - - 0.00000000000000000000000000000007469 138.0
PJD1_k127_1139390_0 Carboxypeptidase regulatory-like domain - - - 2.218e-229 745.0
PJD1_k127_1139390_1 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 594.0
PJD1_k127_1139390_10 PFAM RNA-binding protein AU-1 Ribonuclease E G K08301 - - 0.00000000000000000000000000000000000000000000000002677 192.0
PJD1_k127_1139390_11 Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5- phosphate and a purine or pyrimidine base - GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009123,GO:0009125,GO:0009159,GO:0009162,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0070694,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 0.000000000000000007143 95.0
PJD1_k127_1139390_12 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.0000000000000005779 83.0
PJD1_k127_1139390_2 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 424.0
PJD1_k127_1139390_3 PA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007951 382.0
PJD1_k127_1139390_4 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 370.0
PJD1_k127_1139390_5 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008601 352.0
PJD1_k127_1139390_6 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006387 285.0
PJD1_k127_1139390_7 Voltage gated chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005592 273.0
PJD1_k127_1139390_8 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000001897 216.0
PJD1_k127_1139390_9 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000001556 224.0
PJD1_k127_1144988_0 Serves to protect cells from the toxic effects of hydrogen peroxide K03781 - 1.11.1.6 2.939e-314 989.0
PJD1_k127_1144988_1 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 2.368e-222 710.0
PJD1_k127_1144988_10 binding-protein-dependent transport systems inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001332 269.0
PJD1_k127_1144988_11 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003338 269.0
PJD1_k127_1144988_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001912 267.0
PJD1_k127_1144988_13 PFAM extracellular solute-binding protein family 1 K02027,K10236 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000291 265.0
PJD1_k127_1144988_14 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000000000000000000000003773 219.0
PJD1_k127_1144988_15 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000279 219.0
PJD1_k127_1144988_16 histidine kinase A domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000006222 175.0
PJD1_k127_1144988_17 Protein of unknown function (DUF421) - - - 0.0000000000000000000000000000000000000000005005 164.0
PJD1_k127_1144988_18 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.000000000000000000000000000000000000223 141.0
PJD1_k127_1144988_19 Protein of unknown function (DUF1622) - - - 0.0000000000000000000000000008992 117.0
PJD1_k127_1144988_2 KaiC K08482 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003834 602.0
PJD1_k127_1144988_20 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000581 121.0
PJD1_k127_1144988_21 Glycosyl hydrolase family 65, C-terminal domain K01087,K01194 GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0030312,GO:0044464,GO:0071944 3.1.3.12,3.2.1.28 0.00000000000000000001056 104.0
PJD1_k127_1144988_22 transmembrane transport - - - 0.000000000000000005371 88.0
PJD1_k127_1144988_23 - - - - 0.00000000000002488 79.0
PJD1_k127_1144988_24 - - - - 0.00000000000005273 79.0
PJD1_k127_1144988_25 Transglycosylase associated protein - - - 0.0000000005157 63.0
PJD1_k127_1144988_26 - - - - 0.00000002298 62.0
PJD1_k127_1144988_28 - - - - 0.000007169 55.0
PJD1_k127_1144988_29 Belongs to the UPF0337 (CsbD) family - - - 0.00001566 52.0
PJD1_k127_1144988_3 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004349 462.0
PJD1_k127_1144988_30 Serves to protect cells from the toxic effects of hydrogen peroxide K03781 - 1.11.1.6 0.0003385 50.0
PJD1_k127_1144988_31 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain - - - 0.0005208 49.0
PJD1_k127_1144988_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 343.0
PJD1_k127_1144988_5 Zinc-uptake complex component A periplasmic K02077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 332.0
PJD1_k127_1144988_6 ABC 3 transport family K02075 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008185 329.0
PJD1_k127_1144988_7 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 303.0
PJD1_k127_1144988_8 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001314 287.0
PJD1_k127_1144988_9 PFAM binding-protein-dependent transport systems inner membrane component K02025,K10237 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000528 273.0
PJD1_k127_1158098_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 359.0
PJD1_k127_1158098_1 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 357.0
PJD1_k127_1158098_2 Methyltransferase K18911 - 2.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000001941 265.0
PJD1_k127_1158098_3 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000005306 200.0
PJD1_k127_1158098_4 HlyD family secretion protein K02005 - - 0.00000000000000000000000000000000000000007089 166.0
PJD1_k127_1158098_5 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000001567 101.0
PJD1_k127_1158098_6 PFAM Phenylalanine and histidine ammonia-lyase K01745 - 4.3.1.3 0.00001565 51.0
PJD1_k127_1171616_0 TIGRFAM amino acid carrier protein K03310 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 548.0
PJD1_k127_1171616_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835,K01840 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007384 389.0
PJD1_k127_1171616_2 Sigma factor PP2C-like phosphatases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 336.0
PJD1_k127_1171616_3 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 327.0
PJD1_k127_1171616_4 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 298.0
PJD1_k127_1171616_5 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009918 256.0
PJD1_k127_1171616_6 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000003659 213.0
PJD1_k127_1171616_7 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000000009873 204.0
PJD1_k127_1171616_8 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000001698 195.0
PJD1_k127_1171616_9 Transcriptional regulatory protein, C terminal K07657 - - 0.0000000000000000000000003352 122.0
PJD1_k127_1213864_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0 1506.0
PJD1_k127_1213864_1 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 4.074e-307 966.0
PJD1_k127_1213864_10 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) - - - 0.000000000000000000000000000000000000000000000000004402 189.0
PJD1_k127_1213864_11 Redoxin - - - 0.000000000000000000000000000000000758 132.0
PJD1_k127_1213864_12 Redoxin - - - 0.000000000006395 70.0
PJD1_k127_1213864_13 Tetratricopeptide repeat - - - 0.000001916 60.0
PJD1_k127_1213864_14 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0001795 54.0
PJD1_k127_1213864_2 protein secretion by the type I secretion system K11085 - - 2.349e-209 666.0
PJD1_k127_1213864_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648,K18003 - 2.3.1.180,2.3.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 479.0
PJD1_k127_1213864_4 AIR synthase related protein, C-terminal domain K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 361.0
PJD1_k127_1213864_5 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000001399 220.0
PJD1_k127_1213864_6 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000000000000000000000000000000000000000000000000000000000001403 225.0
PJD1_k127_1213864_7 Formyl transferase K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000001303 216.0
PJD1_k127_1213864_8 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000002598 217.0
PJD1_k127_1213864_9 PFAM peptidase S11, D-alanyl-D-alanine carboxypeptidase K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000002777 218.0
PJD1_k127_1231674_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009589 516.0
PJD1_k127_1231674_1 CBS domain-containing protein K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 376.0
PJD1_k127_1231674_10 - - - - 0.00000000003957 69.0
PJD1_k127_1231674_11 PFAM OmpW family K07275 - - 0.0000000632 63.0
PJD1_k127_1231674_12 Psort location CytoplasmicMembrane, score - - - 0.0000001163 65.0
PJD1_k127_1231674_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 322.0
PJD1_k127_1231674_3 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 323.0
PJD1_k127_1231674_4 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000005221 271.0
PJD1_k127_1231674_5 DnaJ C terminal domain K03686,K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002423 256.0
PJD1_k127_1231674_6 BadF/BadG/BcrA/BcrD ATPase family - - - 0.000000000000000000000000000000000000000000003549 176.0
PJD1_k127_1231674_7 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000002642 150.0
PJD1_k127_1231674_8 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.00000000000000003846 90.0
PJD1_k127_1231674_9 Glyoxalase-like domain K05606 GO:0003674,GO:0003824,GO:0004493,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016853,GO:0016854,GO:0019637,GO:0019693,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046491,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 5.1.99.1 0.0000000000002909 70.0
PJD1_k127_1247801_0 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K07713,K07714,K19641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007297 499.0
PJD1_k127_1247801_1 Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 492.0
PJD1_k127_1247801_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 398.0
PJD1_k127_1247801_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007035 371.0
PJD1_k127_1247801_4 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000762 282.0
PJD1_k127_1247801_5 Multidrug resistance protein K11741 - - 0.0000000000000000000000000000000000001502 145.0
PJD1_k127_127188_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 2.958e-199 637.0
PJD1_k127_127188_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 588.0
PJD1_k127_127188_2 electron transfer activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005393 542.0
PJD1_k127_127188_3 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00207,K12527,K17723 - 1.3.1.1,1.3.1.2,1.97.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006339 542.0
PJD1_k127_127188_5 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 508.0
PJD1_k127_127188_6 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 472.0
PJD1_k127_127188_7 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 324.0
PJD1_k127_127188_8 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000005491 79.0
PJD1_k127_1315174_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.71e-209 684.0
PJD1_k127_1315174_1 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 371.0
PJD1_k127_1315174_2 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000724 216.0
PJD1_k127_1315174_3 Radical SAM superfamily - - - 0.00000000000000000000000000000000000136 158.0
PJD1_k127_1315174_4 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000003594 119.0
PJD1_k127_1315174_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000003855 104.0
PJD1_k127_1315174_6 Glycosyl transferase family 21 - - - 0.00000000000000000007657 101.0
PJD1_k127_1315174_7 Protein of unknown function (DUF503) K09764 - - 0.000000000000104 76.0
PJD1_k127_1315174_8 Chemotaxis protein histidine kinase and related kinases K02487,K06596 - - 0.0003888 47.0
PJD1_k127_1344458_0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 349.0
PJD1_k127_1344458_1 Belongs to the CinA family K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 303.0
PJD1_k127_1344458_2 Bacterial membrane protein, YfhO - - - 0.000000000000000000000000003923 129.0
PJD1_k127_1347928_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 567.0
PJD1_k127_1347928_1 L-seryl-tRNA selenium transferase K01042 - 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 357.0
PJD1_k127_1347928_2 Aminotransferase class I and II K00812,K10907 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001171 289.0
PJD1_k127_1347928_3 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000001305 191.0
PJD1_k127_1347928_4 domain, Protein - - - 0.0000003431 59.0
PJD1_k127_1347928_5 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.0002654 51.0
PJD1_k127_1393379_0 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 561.0
PJD1_k127_1393379_1 PFAM Electron transfer flavoprotein alpha K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 383.0
PJD1_k127_1393379_2 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 376.0
PJD1_k127_1393379_3 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 354.0
PJD1_k127_1393379_4 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004897 300.0
PJD1_k127_1393379_5 - - - - 0.000000000000000000000000000000000000000000000000000005515 201.0
PJD1_k127_1393379_6 - - - - 0.00000000000000000000000000006405 125.0
PJD1_k127_1393379_7 - - - - 0.000000000000000000000005222 113.0
PJD1_k127_1595083_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 5.558e-209 664.0
PJD1_k127_1595083_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 552.0
PJD1_k127_1595083_10 positive regulation of growth rate - - - 0.00000000000000000000000005288 121.0
PJD1_k127_1595083_11 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000007886 105.0
PJD1_k127_1595083_12 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000000001158 98.0
PJD1_k127_1595083_13 DivIVA protein K04074,K07484 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000003489 76.0
PJD1_k127_1595083_14 YGGT family K02221 - - 0.00004824 51.0
PJD1_k127_1595083_2 oxidoreductase activity K00274 - 1.4.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000006298 276.0
PJD1_k127_1595083_3 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000002247 280.0
PJD1_k127_1595083_4 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000001713 203.0
PJD1_k127_1595083_5 of the beta-lactamase K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000002349 189.0
PJD1_k127_1595083_6 Imidazolone-5-propionate hydrolase K01468 - 3.5.2.7 0.0000000000000000000000000000000000002951 152.0
PJD1_k127_1595083_7 Ankyrin repeat - - - 0.000000000000000000000000000000000002208 149.0
PJD1_k127_1595083_8 Reverse transcriptase-like K03469 - 3.1.26.4 0.0000000000000000000000000000000000808 147.0
PJD1_k127_1595083_9 hydrolase (HAD superfamily) K07025 - - 0.000000000000000000000000000006923 128.0
PJD1_k127_1597910_0 YmdB-like protein K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003148 266.0
PJD1_k127_1597910_1 PFAM Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000005717 156.0
PJD1_k127_1597910_2 PFAM MazG nucleotide pyrophosphohydrolase - - - 0.0000000000000000000000000000000000002132 143.0
PJD1_k127_1597910_3 TPR Domain containing protein K12600 - - 0.000000000398 72.0
PJD1_k127_1597910_4 Two component regulator propeller - - - 0.0000000006086 64.0
PJD1_k127_1597910_5 Mitochondrial biogenesis AIM24 - - - 0.00000000092 71.0
PJD1_k127_1597910_6 Glycosyl transferase family 2 - - - 0.0002443 51.0
PJD1_k127_1634116_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006943 448.0
PJD1_k127_1634116_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 323.0
PJD1_k127_1634116_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002108 287.0
PJD1_k127_1634116_3 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0031224,GO:0031226,GO:0032940,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051205,GO:0051234,GO:0051259,GO:0051260,GO:0051641,GO:0061024,GO:0065003,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001236 293.0
PJD1_k127_1634116_4 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000002443 166.0
PJD1_k127_1634116_5 Haemolytic - - - 0.0000000000000000000000001733 108.0
PJD1_k127_1634116_6 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.000000000000000008304 86.0
PJD1_k127_1634116_7 PFAM Single-stranded nucleic acid binding R3H K06346 - - 0.0000000000002475 81.0
PJD1_k127_1634116_8 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000006844 68.0
PJD1_k127_1634116_9 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000008074 72.0
PJD1_k127_1637144_0 protein histidine kinase activity - - - 2.251e-307 961.0
PJD1_k127_1637144_1 PFAM Glycosyl transferase, group 1 - - - 4.635e-278 874.0
PJD1_k127_1637144_2 beta-1,4-mannooligosaccharide phosphorylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 489.0
PJD1_k127_1637144_3 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 412.0
PJD1_k127_1637144_4 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 416.0
PJD1_k127_1637144_5 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000001619 188.0
PJD1_k127_1637144_6 RNA recognition motif - - - 0.000000000000000006624 85.0
PJD1_k127_1651253_0 Sulfate permease family K01673,K03321 - 4.2.1.1 2.551e-195 623.0
PJD1_k127_1651253_1 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 449.0
PJD1_k127_1651253_2 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004011 337.0
PJD1_k127_1651253_3 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 321.0
PJD1_k127_1651253_4 RNA pseudouridylate synthase K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 318.0
PJD1_k127_1651253_5 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002653 251.0
PJD1_k127_1651253_6 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000002334 224.0
PJD1_k127_1651253_7 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.000000000000000000000000007154 110.0
PJD1_k127_1651253_8 Gram-negative bacterial TonB protein C-terminal - - - 0.00000002344 64.0
PJD1_k127_1663900_0 Leukotriene A4 hydrolase, C-terminal - - - 2.205e-210 677.0
PJD1_k127_1663900_1 Sigma-54 interaction domain K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 557.0
PJD1_k127_1663900_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 409.0
PJD1_k127_1668908_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.504e-204 668.0
PJD1_k127_1668908_1 Transglycosylase SLT domain K08309 - - 0.000000000000000000000000000000000000000000004367 186.0
PJD1_k127_1668908_2 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.00000000000000000002214 98.0
PJD1_k127_1668908_3 TIGRFAM VWFA-related Acidobacterial domain K07114 - - 0.00000001669 67.0
PJD1_k127_168435_0 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 543.0
PJD1_k127_168435_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 518.0
PJD1_k127_168435_10 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000001118 173.0
PJD1_k127_168435_11 DinB superfamily - - - 0.0000000000000000000000000000000000005405 147.0
PJD1_k127_168435_12 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.00000000000000000000000336 113.0
PJD1_k127_168435_13 - - - - 0.00000000000000000007147 100.0
PJD1_k127_168435_14 PFAM DSBA-like thioredoxin domain - - - 0.0000000000000001337 91.0
PJD1_k127_168435_15 Roadblock/LC7 domain - - - 0.000000000003819 71.0
PJD1_k127_168435_17 Alternative locus ID - - - 0.00000001068 66.0
PJD1_k127_168435_18 Rhodanese Homology Domain K03972 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005623,GO:0016740,GO:0016782,GO:0016783,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.000000049 59.0
PJD1_k127_168435_2 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 432.0
PJD1_k127_168435_3 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 369.0
PJD1_k127_168435_4 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 371.0
PJD1_k127_168435_5 LAO AO transport system K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 316.0
PJD1_k127_168435_6 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005658 269.0
PJD1_k127_168435_7 L-asparaginase II - - - 0.000000000000000000000000000000000000000000000000000000000000000000001249 249.0
PJD1_k127_168435_8 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000003999 223.0
PJD1_k127_168435_9 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000009027 223.0
PJD1_k127_1720910_0 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 327.0
PJD1_k127_1720910_1 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000003471 233.0
PJD1_k127_1720910_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000002626 222.0
PJD1_k127_1720910_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000002161 197.0
PJD1_k127_1720910_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000001391 163.0
PJD1_k127_1720910_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000001188 160.0
PJD1_k127_1720910_6 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000003223 51.0
PJD1_k127_176158_0 Glycosyl transferase family 21 K00694 - 2.4.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 497.0
PJD1_k127_176158_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008026 439.0
PJD1_k127_176158_2 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 300.0
PJD1_k127_176158_3 Glycosyl hydrolase family 26 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000221 285.0
PJD1_k127_176158_4 Pfam Methyltransferase - - - 0.00000000000000000000000000000000000003713 151.0
PJD1_k127_176158_5 - - - - 0.00002613 57.0
PJD1_k127_1784605_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 518.0
PJD1_k127_1784605_1 CoA-transferase family III K18702 - 2.8.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 345.0
PJD1_k127_1784605_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 304.0
PJD1_k127_1784605_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000005213 209.0
PJD1_k127_1784605_4 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000001472 144.0
PJD1_k127_1784605_5 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.000000000000000000000000000000001556 141.0
PJD1_k127_1784605_6 CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000005826 105.0
PJD1_k127_1784605_7 - - - - 0.0000000000000000004306 91.0
PJD1_k127_1837218_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 2.662e-217 684.0
PJD1_k127_1837218_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000001788 248.0
PJD1_k127_1837218_2 cytochrome c nitrite reductase K15876 - - 0.000000000000000000000000000000000000000000000000000000005613 201.0
PJD1_k127_1837218_3 methyltransferase - - - 0.0000000000000000000000000000000000000000000000003129 186.0
PJD1_k127_1837218_4 YtxH-like protein - - - 0.00005941 48.0
PJD1_k127_1845168_0 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008848 421.0
PJD1_k127_1845168_1 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000003903 279.0
PJD1_k127_1845168_2 PTS system, glucose subfamily, IIA K11189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006174 253.0
PJD1_k127_1845168_3 - K01992 - - 0.000000000000000000000000000000000000000000000000000000000000001274 229.0
PJD1_k127_1845168_4 Peptidase inhibitor I9 - - - 0.000000000000000000000000000000000000000000000000000000000000004799 248.0
PJD1_k127_1845168_5 Sigma-70 region 2 - - - 0.000000000000000000000000000000000000000000000000000000000001948 216.0
PJD1_k127_1845168_6 DinB family - - - 0.0000000000000000000000000000000000000000000000000000000001584 209.0
PJD1_k127_1845168_7 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.00000000000000000000000000000000000000000000000005952 180.0
PJD1_k127_1845168_8 CHRD domain - - - 0.00000000000000000000005336 112.0
PJD1_k127_1847577_0 DEAD DEAH box K03724 - - 0.0 1185.0
PJD1_k127_1847577_1 DEAD DEAH box K03724 - - 4.73e-207 655.0
PJD1_k127_1847577_2 Belongs to the FPG family K05522 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 306.0
PJD1_k127_1847577_3 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.0000000000000000000000000000000000000000000000001266 186.0
PJD1_k127_1878475_0 N-acetylglucosaminylinositol deacetylase activity K22136 - - 2.667e-255 811.0
PJD1_k127_1878475_1 Sodium:solute symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 619.0
PJD1_k127_1878475_2 5'-nucleotidase, C-terminal domain K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005379 460.0
PJD1_k127_1878475_3 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K11381 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 413.0
PJD1_k127_1878475_4 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 371.0
PJD1_k127_1878475_5 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000006346 258.0
PJD1_k127_1878475_6 alpha/beta hydrolase fold K07019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009472 265.0
PJD1_k127_1878475_7 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000005117 196.0
PJD1_k127_1878475_8 Protein of Unknown function (DUF2784) - - - 0.0000000000000000000000000000000000001873 145.0
PJD1_k127_1897820_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 1.194e-276 885.0
PJD1_k127_1897820_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 3.744e-205 676.0
PJD1_k127_1897820_2 Short-chain dehydrogenase reductase (SDR) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 321.0
PJD1_k127_1897820_3 anaphase-promoting complex binding - - - 0.0000000000000000000000000000000000000000000000000000000000001941 229.0
PJD1_k127_1897820_4 - - - - 0.000000000000000000000000000000000000000000000007694 192.0
PJD1_k127_1897820_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000257 173.0
PJD1_k127_1897820_6 Stage II sporulation protein E K07315 - 3.1.3.3 0.00000000000000000000000000000001057 143.0
PJD1_k127_1897820_7 Glycosyltransferase like family 2 K07011 - - 0.00000000000000000001494 104.0
PJD1_k127_1910461_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.276e-262 822.0
PJD1_k127_1910461_1 Asparaginase K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 405.0
PJD1_k127_1910461_2 - K07215 - 1.14.99.58 0.00000000000000000000000000000000000000000000002445 177.0
PJD1_k127_1910461_3 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000003791 123.0
PJD1_k127_1910461_4 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000001193 83.0
PJD1_k127_193065_0 PFAM Protein synthesis factor, GTP-binding K06207 - - 5.545e-201 640.0
PJD1_k127_193065_1 Predicted membrane protein (DUF2254) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 347.0
PJD1_k127_193065_2 ABC transporter permease K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007282 288.0
PJD1_k127_193065_3 PFAM glycosyl transferase family 39 - - - 0.00000000000000000000000000000000000000000000007162 191.0
PJD1_k127_193065_4 RES - - - 0.000000000000000000000000000000000007412 150.0
PJD1_k127_193065_5 Protein of unknown function (DUF2384) - - - 0.0000000000000000001363 94.0
PJD1_k127_193065_6 translation initiation factor activity - - - 0.0006272 51.0
PJD1_k127_1933944_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006089 441.0
PJD1_k127_1933944_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004386 408.0
PJD1_k127_1933944_2 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K21310 - 2.1.1.334 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 336.0
PJD1_k127_1933944_3 PFAM SMP-30 Gluconolaconase LRE-like region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003207 274.0
PJD1_k127_1933944_4 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000004027 259.0
PJD1_k127_1933944_5 SpoIID LytB domain protein K06381 - - 0.0000000000000000000000000000002119 142.0
PJD1_k127_193612_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.269e-205 650.0
PJD1_k127_193612_1 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 428.0
PJD1_k127_193612_10 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000356 229.0
PJD1_k127_193612_11 Stage II sporulation protein E K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000003986 179.0
PJD1_k127_193612_12 transglycosylase - - - 0.000000000000000000000000000000000000111 151.0
PJD1_k127_193612_13 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000001443 144.0
PJD1_k127_193612_14 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000006894 139.0
PJD1_k127_193612_15 CarD-like/TRCF domain K07736 - - 0.000000000000000000000000000000001385 136.0
PJD1_k127_193612_16 - - - - 0.000000000000000000000000000001125 126.0
PJD1_k127_193612_17 Glyoxalase-like domain K05606 - 5.1.99.1 0.000000000000000000000000006484 111.0
PJD1_k127_193612_18 Cold shock protein domain K03704 - - 0.0000000000000000000000001515 109.0
PJD1_k127_193612_2 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004652 419.0
PJD1_k127_193612_3 HD domain K07023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 315.0
PJD1_k127_193612_4 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 317.0
PJD1_k127_193612_5 Belongs to the 'phage' integrase family K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 308.0
PJD1_k127_193612_6 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 284.0
PJD1_k127_193612_7 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000422 280.0
PJD1_k127_193612_8 PFAM Major Facilitator Superfamily K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002906 286.0
PJD1_k127_193612_9 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004501 239.0
PJD1_k127_1941461_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 449.0
PJD1_k127_1941461_1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 390.0
PJD1_k127_1941461_2 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 338.0
PJD1_k127_1941461_3 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000003598 227.0
PJD1_k127_1941461_4 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000007973 192.0
PJD1_k127_1941461_5 Response regulator receiver domain - - - 0.0000000000000000000000004903 109.0
PJD1_k127_1941461_6 Transcriptional regulatory protein, C terminal K07657 - - 0.000000000000001062 82.0
PJD1_k127_1941461_7 ABC transporter K01990,K21397 - - 0.0000000000004087 75.0
PJD1_k127_1946903_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 1.699e-218 688.0
PJD1_k127_1946903_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 372.0
PJD1_k127_1946903_2 peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001012 263.0
PJD1_k127_1946903_3 Nodulation protein S (NodS) - - - 0.0000000000000000000000000000000000000000000000000000000000000001718 228.0
PJD1_k127_1946903_4 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000009295 211.0
PJD1_k127_1946903_5 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.00000000000000000000000000000000000003924 157.0
PJD1_k127_1946903_6 Sortase family K07284 - 3.4.22.70 0.00000000000000000000000000000007577 134.0
PJD1_k127_1946903_7 Rhodanese Homology Domain - - - 0.00000000000000000000002538 106.0
PJD1_k127_1946903_8 - - - - 0.000001325 59.0
PJD1_k127_1989410_0 Aldehyde dehydrogenase family K00294 - 1.2.1.88 1.601e-204 649.0
PJD1_k127_1989410_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 2.416e-196 637.0
PJD1_k127_1989410_2 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302,K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000006044 222.0
PJD1_k127_1989410_3 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.0000000000000000000000000000000000000000000000008851 185.0
PJD1_k127_1989410_4 - - - - 0.0000000000000000000000000000000000000000007885 172.0
PJD1_k127_1989410_5 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.000000000000000000000000000000003724 134.0
PJD1_k127_1989410_6 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000004578 83.0
PJD1_k127_2019284_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 315.0
PJD1_k127_2019284_1 Peptidoglycan-synthase activator LpoB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003409 282.0
PJD1_k127_2019284_2 Represses a number of genes involved in the response to DNA damage (SOS response) K01356,K03503 - 3.4.21.88 0.000000000000000000000000000000000000000000000005241 179.0
PJD1_k127_2019284_3 Cache domain - - - 0.000000000000000000000000000000000000000007196 166.0
PJD1_k127_2019284_4 Forkhead associated domain - - - 0.0000000000000004192 89.0
PJD1_k127_2019284_5 PFAM response regulator receiver - - - 0.000000001549 64.0
PJD1_k127_2040538_0 Phosphatase K07093 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 514.0
PJD1_k127_2040538_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 446.0
PJD1_k127_2040538_10 Protein of unknown function (DUF1573) - - - 0.00000000001909 77.0
PJD1_k127_2040538_2 Belongs to the MurCDEF family K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 419.0
PJD1_k127_2040538_3 Protein of unknown function (DUF1385) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 314.0
PJD1_k127_2040538_4 PFAM CHAD domain containing protein - - - 0.0000000000000000000000000000000000000000000000002216 187.0
PJD1_k127_2040538_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000002755 171.0
PJD1_k127_2040538_6 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.0000000000000000000000000000000000000339 152.0
PJD1_k127_2040538_7 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000001276 134.0
PJD1_k127_2040538_8 Transmembrane exosortase (Exosortase_EpsH) - - - 0.0000000000000000000000002938 114.0
PJD1_k127_2040538_9 50S ribosomal protein L31 K02909 - - 0.00000000000000000000002939 108.0
PJD1_k127_2050653_0 glycosyl transferase group 1 K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 415.0
PJD1_k127_2050653_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 334.0
PJD1_k127_2050653_10 Bacillithiol biosynthesis BshC K22136 - - 0.000000000000000000000000000000000000000009322 173.0
PJD1_k127_2050653_11 PFAM KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.000000000000000000000000000000003051 137.0
PJD1_k127_2050653_13 TM2 domain - - - 0.0000113 55.0
PJD1_k127_2050653_14 toxin-antitoxin pair type II binding K08591,K19159 GO:0003674,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097351,GO:1903506,GO:2000112,GO:2001141 2.3.1.15 0.0004438 47.0
PJD1_k127_2050653_2 PFAM Nucleotidyl transferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 312.0
PJD1_k127_2050653_3 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004404 265.0
PJD1_k127_2050653_4 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002248 267.0
PJD1_k127_2050653_5 N-acetylglucosaminylinositol deacetylase activity K01463 - - 0.000000000000000000000000000000000000000000000000000000000000000002758 236.0
PJD1_k127_2050653_6 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000000006731 224.0
PJD1_k127_2050653_7 Putative ATP-binding cassette K01992 - - 0.000000000000000000000000000000000000000000000000000000003513 220.0
PJD1_k127_2050653_8 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000414 185.0
PJD1_k127_2050653_9 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000002374 175.0
PJD1_k127_2054579_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 4.058e-208 659.0
PJD1_k127_2054579_1 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 381.0
PJD1_k127_2054579_10 Methyltransferase K08316 - 2.1.1.171 0.000000000000000000005545 100.0
PJD1_k127_2054579_11 DinB superfamily - - - 0.000000001651 66.0
PJD1_k127_2054579_2 PFAM PhoH family protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000965 357.0
PJD1_k127_2054579_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000103 295.0
PJD1_k127_2054579_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000001728 240.0
PJD1_k127_2054579_5 Heat shock protein DnaJ domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001604 235.0
PJD1_k127_2054579_6 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000002945 235.0
PJD1_k127_2054579_8 SMART phosphoesterase PA-phosphatase related - - - 0.0000000000000000000000000000000002958 141.0
PJD1_k127_2054579_9 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000001947 106.0
PJD1_k127_2056443_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1081.0
PJD1_k127_2056443_1 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 411.0
PJD1_k127_2056443_2 rRNA (uridine-N3-)-methyltransferase activity K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001573 281.0
PJD1_k127_2056443_3 3'(2'),5'-bisphosphate nucleotidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005215 279.0
PJD1_k127_2056443_4 methylamine metabolic process - - - 0.0000000000000000000000000000000001184 143.0
PJD1_k127_2056443_5 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K01760 - 4.4.1.8 0.000000000000000000000000006725 119.0
PJD1_k127_2056443_6 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000004419 91.0
PJD1_k127_2056443_7 Glycosyl transferase family 2 - - - 0.0000000000001453 82.0
PJD1_k127_2145967_0 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006248 604.0
PJD1_k127_2145967_1 Arsenical pump-driving ATPase K01551 - 3.6.3.16 0.000000000000000000000000000000000000000004277 167.0
PJD1_k127_2145967_2 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure - - - 0.000000000000000000000000000002643 121.0
PJD1_k127_2145967_3 Gas vesicle protein K - - - 0.00000000000000000000000001856 112.0
PJD1_k127_2145967_4 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth - - - 0.000000000000000000000002502 106.0
PJD1_k127_2145967_5 Gas vesicle synthesis protein GvpL/GvpF - - - 0.00000000000000000001735 101.0
PJD1_k127_2145967_6 Gas vesicle protein - - - 0.0000000003452 63.0
PJD1_k127_2145967_7 His Kinase A (phosphoacceptor) domain - - - 0.00004682 47.0
PJD1_k127_2155566_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.113e-195 642.0
PJD1_k127_2155566_1 Elongation factor SelB, winged helix K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 511.0
PJD1_k127_2155566_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000004468 216.0
PJD1_k127_2184739_0 peptidase M20 - - - 1.773e-195 619.0
PJD1_k127_2184739_1 NAD-specific glutamate dehydrogenase K15371 - 1.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 588.0
PJD1_k127_2184739_10 heat shock protein binding - - - 0.00000000000000000000000000000004804 140.0
PJD1_k127_2184739_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000001224 94.0
PJD1_k127_2184739_12 Protein of unknown function (DUF2723) - - - 0.0000000000008468 81.0
PJD1_k127_2184739_13 RDD family - - - 0.000000000003735 78.0
PJD1_k127_2184739_14 CHAT domain - - - 0.000655 52.0
PJD1_k127_2184739_15 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.0008628 49.0
PJD1_k127_2184739_2 Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities K01782 GO:0003674,GO:0003824,GO:0003857,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008692,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 1.1.1.35,4.2.1.17,5.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005543 585.0
PJD1_k127_2184739_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 529.0
PJD1_k127_2184739_4 COGs COG1022 Long-chain acyl-CoA synthetase (AMP-forming) K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 531.0
PJD1_k127_2184739_5 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 408.0
PJD1_k127_2184739_6 ABC transporter, (ATP-binding protein) K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 321.0
PJD1_k127_2184739_7 Conserved hypothetical protein 698 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009756 317.0
PJD1_k127_2184739_8 COG1668 ABC-type Na efflux pump, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001632 286.0
PJD1_k127_2184739_9 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009888 248.0
PJD1_k127_2245026_0 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007057 302.0
PJD1_k127_2245026_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000000000000000000000000000000000000000000000002667 189.0
PJD1_k127_2245026_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000002004 183.0
PJD1_k127_2245026_3 Semialdehyde dehydrogenase K00133 - 1.2.1.11 0.000000000000000000000000000000000009867 149.0
PJD1_k127_2245026_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000003837 124.0
PJD1_k127_2245026_5 Peptidase family M1 domain - - - 0.0000000000000000000003857 110.0
PJD1_k127_2245026_6 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000002145 68.0
PJD1_k127_2245026_7 Protein of unknown function (DUF465) K09794 - - 0.000001436 53.0
PJD1_k127_2264430_0 amino acid transport K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 455.0
PJD1_k127_2264430_1 PFAM Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005721 352.0
PJD1_k127_2264430_2 Pirin C-terminal cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008287 310.0
PJD1_k127_2264430_3 Beta-lactamase superfamily domain K06136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 300.0
PJD1_k127_2264430_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001168 283.0
PJD1_k127_2264430_5 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002333 244.0
PJD1_k127_2264430_6 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000001659 171.0
PJD1_k127_2264430_7 Tellurite resistance protein TehB - - - 0.00000000000000000000000000000001053 140.0
PJD1_k127_2264430_9 COG3678 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein K06006 - - 0.0000898 51.0
PJD1_k127_2342220_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 1.077e-301 936.0
PJD1_k127_2342220_1 ATP-binding region, ATPase domain protein domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 418.0
PJD1_k127_2342220_2 His Kinase A (phosphoacceptor) domain K11527 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001971 304.0
PJD1_k127_2342220_3 - - - - 0.00000000000000000000000000000000000000000000006877 178.0
PJD1_k127_2342220_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000007784 171.0
PJD1_k127_2342220_5 Right handed beta helix region - - - 0.000000001413 66.0
PJD1_k127_2342563_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 509.0
PJD1_k127_2342563_1 PFAM PfkB domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 392.0
PJD1_k127_2342563_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 357.0
PJD1_k127_2342563_3 DNA restriction-modification system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004653 290.0
PJD1_k127_2342563_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000003261 244.0
PJD1_k127_2342563_5 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.0000000000000000000000000000000000009155 160.0
PJD1_k127_2342563_6 photosystem II stabilization K02237 - - 0.00000000000000004674 86.0
PJD1_k127_2342563_7 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00004022 56.0
PJD1_k127_2382048_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 5.927e-224 714.0
PJD1_k127_2382048_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007427 612.0
PJD1_k127_2382048_2 epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 325.0
PJD1_k127_2382048_3 lipolytic protein G-D-S-L family - - - 0.00000000000000006338 93.0
PJD1_k127_2382048_4 - - - - 0.000000001498 71.0
PJD1_k127_2395699_0 PFAM carboxyl transferase K01969,K15052 - 2.1.3.15,6.4.1.3,6.4.1.4 1.083e-254 795.0
PJD1_k127_2395699_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 517.0
PJD1_k127_2395699_2 Glycine cleavage H-protein - - - 0.000000000000000000000000000000000000000000000000000000000000000003348 236.0
PJD1_k127_2395699_3 Peptidase family M54 K06974 - - 0.0000000000000000000000000000000000000000000000000005504 189.0
PJD1_k127_2395699_4 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715,K15866,K20036 - 4.2.1.155,4.2.1.17,5.3.3.18 0.00000000000000000000001713 108.0
PJD1_k127_2395699_5 - - - - 0.00000000000000000007785 101.0
PJD1_k127_2395699_6 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K20866 - 3.1.3.10 0.00000000000000003521 95.0
PJD1_k127_2395699_7 - - - - 0.0000000000000001057 85.0
PJD1_k127_2395699_8 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000003107 81.0
PJD1_k127_2479799_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 1.949e-267 841.0
PJD1_k127_2479799_1 Phosphoribosyl transferase domain K07101 - - 0.00000000000000000000000005137 108.0
PJD1_k127_2479799_2 4-vinyl reductase, 4VR - - - 0.00000000000000002149 89.0
PJD1_k127_2479799_3 PFAM GGDEF domain - - - 0.0002166 52.0
PJD1_k127_249337_0 Sigma-70 region 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 593.0
PJD1_k127_249337_1 COG2133 Glucose sorbosone dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044 595.0
PJD1_k127_249337_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 523.0
PJD1_k127_249337_3 Histidine kinase K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003112 280.0
PJD1_k127_249337_4 Homocysteine S-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002365 261.0
PJD1_k127_249337_5 - - - - 0.00000000000000000000000000000000000000000004412 168.0
PJD1_k127_249337_6 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000006336 143.0
PJD1_k127_249337_7 - - - - 0.00002533 56.0
PJD1_k127_2499273_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 558.0
PJD1_k127_2499273_1 metallopeptidase activity K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 510.0
PJD1_k127_2499273_10 PFAM Mur ligase K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000001989 248.0
PJD1_k127_2499273_11 Peptidase family M20/M25/M40 - - - 0.0000000000000000000000000000000000000000000000001853 194.0
PJD1_k127_2499273_12 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000005958 187.0
PJD1_k127_2499273_13 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000001003 167.0
PJD1_k127_2499273_14 Sirohaem biosynthesis protein central K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000001265 159.0
PJD1_k127_2499273_15 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000000828 161.0
PJD1_k127_2499273_16 Bacterial membrane protein, YfhO - - - 0.0000000000000000000000000000000007438 151.0
PJD1_k127_2499273_17 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000003598 110.0
PJD1_k127_2499273_18 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.000000000000000000002058 98.0
PJD1_k127_2499273_19 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000003722 95.0
PJD1_k127_2499273_2 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006166 486.0
PJD1_k127_2499273_20 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.0000000000000000006697 91.0
PJD1_k127_2499273_21 Protein of unknown function (DUF2723) - - - 0.000000000000004208 88.0
PJD1_k127_2499273_23 Protein of unknown function (DUF2723) - - - 0.00000000001045 78.0
PJD1_k127_2499273_24 Bacterial membrane protein, YfhO - - - 0.0000001096 65.0
PJD1_k127_2499273_25 zinc-ribbon domain - - - 0.0000009537 59.0
PJD1_k127_2499273_26 Gram-negative bacterial TonB protein C-terminal - - - 0.000001839 61.0
PJD1_k127_2499273_27 Serine/Threonine protein kinases, catalytic domain K08884,K12132 - 2.7.11.1 0.0002692 54.0
PJD1_k127_2499273_3 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 435.0
PJD1_k127_2499273_4 Carboxyl transferase domain K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 377.0
PJD1_k127_2499273_5 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007314 266.0
PJD1_k127_2499273_6 Putative modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000119 276.0
PJD1_k127_2499273_7 DNA recombination-mediator protein A K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002967 267.0
PJD1_k127_2499273_8 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000002356 265.0
PJD1_k127_2499273_9 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000957 264.0
PJD1_k127_2504726_0 6-phosphogluconolactonase activity - - - 4.473e-314 989.0
PJD1_k127_2504726_1 Metallopeptidase family M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005898 587.0
PJD1_k127_2504726_10 - - - - 0.000000001018 66.0
PJD1_k127_2504726_2 Glyco_18 K01183 - 3.2.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 372.0
PJD1_k127_2504726_3 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 370.0
PJD1_k127_2504726_4 PFAM Type II IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 359.0
PJD1_k127_2504726_5 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001023 293.0
PJD1_k127_2504726_6 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003322 260.0
PJD1_k127_2504726_7 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000009508 230.0
PJD1_k127_2504726_8 membrane - - - 0.00000000000000000000000001175 118.0
PJD1_k127_2504726_9 Cell wall-active antibiotics response 4TMS YvqF - - - 0.00000000000000000002873 100.0
PJD1_k127_2563458_0 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 524.0
PJD1_k127_2563458_1 Membrane dipeptidase (Peptidase family M19) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007222 347.0
PJD1_k127_2563458_2 MOSC N-terminal beta barrel domain K07140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004338 282.0
PJD1_k127_2563458_3 Amidinotransferase K01482 - 3.5.3.18 0.000000000000000000000000000000000000000000000000000000000000000000001663 249.0
PJD1_k127_2563458_4 carboxymethylenebutenolidase activity K01061,K06889 - 3.1.1.45 0.000000000000000000000001793 112.0
PJD1_k127_2563458_5 transferase activity, transferring glycosyl groups K20276 - - 0.000000000000000000005835 109.0
PJD1_k127_2563458_6 PFAM PAP2 superfamily - - - 0.000000000000000005517 96.0
PJD1_k127_2650351_0 Amino acid permease - - - 6.005e-231 733.0
PJD1_k127_2650351_1 Transport of potassium into the cell K03549 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000904 496.0
PJD1_k127_2650351_2 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005445 412.0
PJD1_k127_2650351_3 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008612 251.0
PJD1_k127_2650351_4 Transcriptional regulatory protein, C terminal K02483,K07667 - - 0.000000000000000000000000000000000000000000000000000000000007724 215.0
PJD1_k127_2650351_5 - - - - 0.0000000000000000000000000000000000000000000000002771 183.0
PJD1_k127_2650351_6 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000001084 150.0
PJD1_k127_2650351_7 Domain of unknown function (DUF4118) K07646 - 2.7.13.3 0.0000000000000000000000000001165 130.0
PJD1_k127_2689628_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000843 543.0
PJD1_k127_2689628_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 481.0
PJD1_k127_2689628_2 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004176 266.0
PJD1_k127_2689628_3 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000001611 243.0
PJD1_k127_2689628_4 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.0000000000000000000000000000000000000003899 164.0
PJD1_k127_2740293_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000312 234.0
PJD1_k127_2740293_1 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000472 220.0
PJD1_k127_2740293_2 Protein of unknown function (DUF2400) - - - 0.0000000000000000000000000000000000000000000000000000000001148 220.0
PJD1_k127_2740293_3 Fungalysin metallopeptidase (M36) - - - 0.000000000000000000000000000000000000000000000001599 200.0
PJD1_k127_2740293_4 Belongs to the Nudix hydrolase family - - - 0.0000000000000000000000000000001678 131.0
PJD1_k127_2740293_5 SdrD B-like domain - - - 0.000000000000000000000000000003211 141.0
PJD1_k127_2740293_6 Peptidase family M28 K19702 - 3.4.11.24 0.000000841 63.0
PJD1_k127_2740293_7 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000001625 61.0
PJD1_k127_2740293_8 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042221,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071944 - 0.00001262 49.0
PJD1_k127_277996_0 Molybdopterin oxidoreductase Fe4S4 domain K00370 - 1.7.5.1 1.174e-254 796.0
PJD1_k127_277996_1 4Fe-4S dicluster domain K00184 - - 2.016e-248 808.0
PJD1_k127_277996_2 nitrate reductase beta subunit K00371 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009898,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0031235,GO:0032991,GO:0033554,GO:0042126,GO:0043436,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0048037,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204,GO:2001057 1.7.5.1 2.314e-233 730.0
PJD1_k127_277996_3 Polysulphide reductase, NrfD K00185 - - 1.65e-216 688.0
PJD1_k127_277996_4 nitrate reductase activity K00370,K00374,K02575 GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006950,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009628,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0036293,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0046906,GO:0048037,GO:0050896,GO:0055114,GO:0070469,GO:0070470,GO:0070482,GO:0071944,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204 1.7.5.1 0.00000000000000000000000000000000000000000000000000000000000001426 222.0
PJD1_k127_277996_5 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.0000000000000000000000000000000000000000000000000000000005353 215.0
PJD1_k127_277996_6 cytochrome c - - - 0.00000000000000000000000000000000000000000000000005916 184.0
PJD1_k127_277996_7 PFAM Cytochrome c, class I - - - 0.00000000000000000000000000000000000000000000001471 178.0
PJD1_k127_277996_8 chaperone-mediated protein complex assembly K00373,K17052 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016530,GO:0022607,GO:0034622,GO:0042126,GO:0042128,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0051131,GO:0065003,GO:0071704,GO:0071840,GO:0071941,GO:0140104,GO:2001057 - 0.000000000000002403 85.0
PJD1_k127_2781588_0 Cysteine synthase A K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 319.0
PJD1_k127_2781588_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000119 263.0
PJD1_k127_2781588_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000007323 237.0
PJD1_k127_2781588_3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000006316 186.0
PJD1_k127_2781588_4 PhoQ Sensor - - - 0.000000000000000000000000000000000000000001576 175.0
PJD1_k127_2781588_5 Carbohydrate family 9 binding domain-like - - - 0.0000000000000000000000001028 115.0
PJD1_k127_2781588_6 Belongs to the peptidase S16 family K07177 - - 0.0003759 49.0
PJD1_k127_2835670_0 Phosphoglucose isomerase K01810,K13810 - 2.2.1.2,5.3.1.9 1.903e-318 1004.0
PJD1_k127_2835670_1 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 588.0
PJD1_k127_2835670_2 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 318.0
PJD1_k127_2835670_3 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000003729 151.0
PJD1_k127_2868212_0 Amidase K01426 - 3.5.1.4 3.381e-218 692.0
PJD1_k127_2868212_1 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 317.0
PJD1_k127_2868212_10 PFAM S23 ribosomal protein - - - 0.000000000000000000000000000002229 125.0
PJD1_k127_2868212_2 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003823 269.0
PJD1_k127_2868212_3 TIGRFAM channel protein, hemolysin III family K11068 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001441 268.0
PJD1_k127_2868212_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000001803 258.0
PJD1_k127_2868212_5 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000002394 230.0
PJD1_k127_2868212_6 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000007426 180.0
PJD1_k127_2868212_7 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000000002709 152.0
PJD1_k127_2868212_8 ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component - - - 0.000000000000000000000000000000000000001898 154.0
PJD1_k127_2868212_9 PFAM phospholipase Carboxylesterase K06999 - - 0.0000000000000000000000000000005166 130.0
PJD1_k127_2902518_0 Competence-damaged protein K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007911 486.0
PJD1_k127_2902518_1 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 397.0
PJD1_k127_2902518_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 302.0
PJD1_k127_2902518_3 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004236 281.0
PJD1_k127_2902518_4 Roadblock/LC7 domain - - - 0.0000000000000000000000000000000000000000000000000000000007058 209.0
PJD1_k127_2902518_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000113 144.0
PJD1_k127_2902518_6 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000843 134.0
PJD1_k127_2902518_7 - - - - 0.0000000000000000000001166 100.0
PJD1_k127_2902518_8 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000217 89.0
PJD1_k127_291302_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 4.334e-267 852.0
PJD1_k127_291302_1 COG4772 Outer membrane receptor for Fe3 -dicitrate K16091 - - 2.431e-207 666.0
PJD1_k127_291302_10 PFAM lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000003503 231.0
PJD1_k127_291302_11 Glycoside hydrolase - - - 0.00000000000000000000000000000000000000000000000000008379 201.0
PJD1_k127_291302_12 PFAM Integral membrane protein TerC K05794 - - 0.00000000000000000000000000000000000000000002218 163.0
PJD1_k127_291302_13 PFAM Class I peptide chain release factor K15034 - - 0.00000000000000000000003184 104.0
PJD1_k127_291302_14 2 iron, 2 sulfur cluster binding K02192 GO:0003674,GO:0005488,GO:0048037,GO:0051536,GO:0051537,GO:0051540 - 0.0000006808 53.0
PJD1_k127_291302_2 alpha-galactosidase K07407 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0004557,GO:0005975,GO:0005976,GO:0006080,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0015925,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044238,GO:0051069,GO:0051682,GO:0071704,GO:1901575 3.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 591.0
PJD1_k127_291302_3 Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system K10441,K10545 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005633 568.0
PJD1_k127_291302_4 Periplasmic binding protein domain K10543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 364.0
PJD1_k127_291302_5 carbohydrate transport K10544 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 361.0
PJD1_k127_291302_6 Hydrolase Family 16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 298.0
PJD1_k127_291302_7 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003228 275.0
PJD1_k127_291302_8 dioxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004159 261.0
PJD1_k127_291302_9 Integral membrane protein TerC family K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008162 257.0
PJD1_k127_2931526_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 461.0
PJD1_k127_2931526_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 304.0
PJD1_k127_2931526_2 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 312.0
PJD1_k127_2931526_3 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000009307 210.0
PJD1_k127_2931526_4 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000003268 180.0
PJD1_k127_2931526_5 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0000166,GO:0000287,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016020,GO:0016114,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0032787,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044464,GO:0046490,GO:0046872,GO:0046914,GO:0050518,GO:0051483,GO:0051484,GO:0070567,GO:0071704,GO:0071944,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901576 2.7.7.60 0.000000000000000000000000000000000000001195 156.0
PJD1_k127_2931526_6 peptidase, M16 - - - 0.0000000000000000000000000002955 131.0
PJD1_k127_2931526_7 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0008381 44.0
PJD1_k127_2950309_0 Peptidase family M3 K01392 - 3.4.24.15 1.698e-211 675.0
PJD1_k127_2950309_1 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006219 392.0
PJD1_k127_2950309_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000002453 226.0
PJD1_k127_2950309_3 Peptidase family M23 K21472 - - 0.00000000000000000000000000000000000000000000000005575 184.0
PJD1_k127_2950309_4 DNA-templated transcription, initiation K03088,K07263 - - 0.0000000000000000000000000000000000001671 148.0
PJD1_k127_2977696_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005748 539.0
PJD1_k127_2977696_1 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 - 4.3.1.17 0.0000000000000000000000000000000000000000000000000000000000000000001679 241.0
PJD1_k127_2977696_10 - - - - 0.0000000000000000001984 94.0
PJD1_k127_2977696_11 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000168 86.0
PJD1_k127_2977696_12 Rossmann-like domain K06988 - 1.5.1.40 0.00000000001681 76.0
PJD1_k127_2977696_2 Serine dehydratase beta chain K01752 GO:0003674,GO:0003824,GO:0003941,GO:0016829,GO:0016840,GO:0016841 4.3.1.17 0.0000000000000000000000000000000000000000000000000000000003897 210.0
PJD1_k127_2977696_3 Fructose-bisphosphate aldolase class-II - - - 0.00000000000000000000000000000000000000000000000000000005224 201.0
PJD1_k127_2977696_4 enterobactin catabolic process K07214 - - 0.000000000000000000000000000000000000000000000009549 181.0
PJD1_k127_2977696_5 SnoaL-like domain K06893 - - 0.0000000000000000000000000000000004594 136.0
PJD1_k127_2977696_6 N-acetylglucosaminylinositol deacetylase activity - - - 0.0000000000000000000000000000008752 124.0
PJD1_k127_2977696_7 Glyoxalase-like domain - - - 0.0000000000000000000000000001198 118.0
PJD1_k127_2977696_8 transport protein CorA K03284 - - 0.0000000000000000000005005 110.0
PJD1_k127_2977696_9 Uncharacterized protein family UPF0016 - - - 0.000000000000000000007458 102.0
PJD1_k127_2988052_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 4.69e-208 668.0
PJD1_k127_2988052_1 GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004578 430.0
PJD1_k127_2988052_2 Belongs to the peptidase S51 family K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.000000000000000000000000000000000000000000000000000000000000000000000000002034 259.0
PJD1_k127_2988052_3 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000001953 222.0
PJD1_k127_2988052_4 Platelet-activating factor acetylhydrolase, isoform II - - - 0.00000000000000000000000000000000000000000000000000000000005631 218.0
PJD1_k127_3055705_0 KaiC K08482 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 568.0
PJD1_k127_3055705_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 595.0
PJD1_k127_3055705_2 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 345.0
PJD1_k127_3055705_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000005188 168.0
PJD1_k127_3055705_4 PFAM response regulator receiver - - - 0.000000000000000000000000000000008232 138.0
PJD1_k127_3055705_5 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000003495 141.0
PJD1_k127_3055705_6 Diguanylate cyclase - - - 0.00000000000000000000003756 115.0
PJD1_k127_3055705_7 PFAM KaiB domain K08481 - - 0.00000000000001498 77.0
PJD1_k127_3055822_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 2.096e-205 657.0
PJD1_k127_3055822_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 533.0
PJD1_k127_3055822_10 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000002476 97.0
PJD1_k127_3055822_2 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 471.0
PJD1_k127_3055822_3 ATPases associated with a variety of cellular activities K01990,K09689,K09691,K09693 - 3.6.3.38,3.6.3.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008299 398.0
PJD1_k127_3055822_4 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001453 271.0
PJD1_k127_3055822_5 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000001236 228.0
PJD1_k127_3055822_6 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 0.00000000000000000000000000000000000000000000000000000336 193.0
PJD1_k127_3055822_7 PFAM ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000005706 192.0
PJD1_k127_3055822_8 GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000282 150.0
PJD1_k127_3055822_9 histone H2A K63-linked ubiquitination - - - 0.0000000000000000000000000000000006105 137.0
PJD1_k127_3058600_0 MgsA AAA+ ATPase C terminal K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 458.0
PJD1_k127_3058600_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009654 317.0
PJD1_k127_3058600_2 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - 0.000000000000000000000000000000000000000000000000000000001872 220.0
PJD1_k127_306324_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 3.68e-263 820.0
PJD1_k127_306324_1 pyridoxamine 5'-phosphate oxidase-related FMN-binding K07006 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009312 494.0
PJD1_k127_306324_2 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000003767 228.0
PJD1_k127_306324_3 pyridoxamine 5-phosphate - - - 0.00000000000000000001759 98.0
PJD1_k127_310536_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 410.0
PJD1_k127_310536_1 electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001687 259.0
PJD1_k127_310536_2 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007807 245.0
PJD1_k127_310536_3 helix_turn_helix, Lux Regulon - - - 0.000000002358 65.0
PJD1_k127_3110506_0 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007674 443.0
PJD1_k127_3110506_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 418.0
PJD1_k127_3110506_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000002803 269.0
PJD1_k127_3110506_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000433 231.0
PJD1_k127_3110506_4 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000000005238 145.0
PJD1_k127_3129871_0 Insulinase (Peptidase family M16) K07263 - - 0.0 1167.0
PJD1_k127_3129871_1 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008491 477.0
PJD1_k127_3129871_10 Transcriptional regulatory protein, C terminal K07669,K07672 GO:0000160,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009268,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010446,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0023052,GO:0030312,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0035556,GO:0043254,GO:0044087,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090034,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.0001894 49.0
PJD1_k127_3129871_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 343.0
PJD1_k127_3129871_3 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 312.0
PJD1_k127_3129871_4 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000002674 222.0
PJD1_k127_3129871_5 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000001031 183.0
PJD1_k127_3129871_6 Belongs to the UPF0502 family K09915 - - 0.000000000000000000000000000000000000000000004708 171.0
PJD1_k127_3129871_7 copper resistance - - - 0.00000000000000000000000000000002505 141.0
PJD1_k127_3129871_8 Serine phosphatase RsbU, regulator of sigma subunit K07315 - 3.1.3.3 0.000000000000000065 93.0
PJD1_k127_3129871_9 rho-dependent transcription termination K19000 - - 0.0000002343 56.0
PJD1_k127_3137675_0 Glycosyl hydrolase family 20, domain 2 K12373 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 597.0
PJD1_k127_3137675_1 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001879 282.0
PJD1_k127_3137675_2 Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate K00598 - 2.1.1.144 0.00000000000000000000000000000000000000000000000000000000000000000000000001263 258.0
PJD1_k127_3137675_3 thiolester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000000006014 217.0
PJD1_k127_3137675_4 RNA signal recognition particle 4.5S RNA - - - 0.00000000000000000000000000000000000000000000000004243 184.0
PJD1_k127_3137675_5 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000001321 146.0
PJD1_k127_317144_0 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 380.0
PJD1_k127_317144_1 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000004413 207.0
PJD1_k127_317144_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000002231 192.0
PJD1_k127_317144_3 MFS_1 like family - - - 0.0000000000000000000000000000000000000000006905 172.0
PJD1_k127_317144_4 PFAM ATP-binding region, ATPase domain protein domain protein - - - 0.00000000000000000000000000000000000003625 160.0
PJD1_k127_317144_5 RNA polymerase sigma factor K03088 - - 0.000000000000000000000000002193 119.0
PJD1_k127_317144_6 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000000000000007794 111.0
PJD1_k127_317144_7 Histidine kinase - - - 0.0000000000000002233 85.0
PJD1_k127_317144_8 Heavy-metal resistance - - - 0.00000000001212 76.0
PJD1_k127_317144_9 Protein of unknown function (DUF3108) - - - 0.00006771 53.0
PJD1_k127_3192987_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0 1445.0
PJD1_k127_3192987_1 Penicillin amidase K01434 - 3.5.1.11 2.301e-286 906.0
PJD1_k127_3192987_2 peptidase K07386 - - 4.17e-229 724.0
PJD1_k127_3192987_3 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517 559.0
PJD1_k127_3192987_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 284.0
PJD1_k127_3192987_5 COG0659 Sulfate permease and related transporters (MFS superfamily) K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000189 291.0
PJD1_k127_3192987_7 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000001796 104.0
PJD1_k127_3192987_8 PFAM OmpW family K07275 - - 0.0000000765 62.0
PJD1_k127_3211243_0 General secretory system II, protein E domain protein K02454 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 615.0
PJD1_k127_3211243_1 SMART PUA domain containing protein K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000005098 187.0
PJD1_k127_3211243_2 - - - - 0.00000000000000007288 91.0
PJD1_k127_3217444_0 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001509 258.0
PJD1_k127_3217444_1 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000003523 223.0
PJD1_k127_3217444_2 SMART PUA domain containing protein K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000005707 178.0
PJD1_k127_3217444_3 permease - - - 0.000000000000000000000000000000000000000000002422 179.0
PJD1_k127_3217444_4 Putative bacterial sensory transduction regulator - - - 0.0000000000000000009194 93.0
PJD1_k127_3217444_5 Transcriptional regulatory protein, C terminal K07775 - - 0.0000000000000003255 84.0
PJD1_k127_3217444_6 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000001355 63.0
PJD1_k127_3217444_7 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000001084 56.0
PJD1_k127_3228374_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006465 526.0
PJD1_k127_3228374_1 ABC transporter K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008857 337.0
PJD1_k127_3228374_2 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003778 275.0
PJD1_k127_3228374_3 Branched-chain amino acid transport system / permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000006526 222.0
PJD1_k127_3228374_4 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000005816 173.0
PJD1_k127_3228374_5 Carbamoyl-phosphate synthetase large chain domain protein K01968 - 6.4.1.4 0.0000000000000000000000000000002529 128.0
PJD1_k127_3228374_6 Peptidase M56 - - - 0.00000000000000000000003568 115.0
PJD1_k127_3228374_7 Peptidase M56, BlaR1 - - - 0.00000000000142 79.0
PJD1_k127_3244840_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.766e-267 845.0
PJD1_k127_3244840_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008376 572.0
PJD1_k127_3244840_10 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.0000000000000000000000000000000000000000002085 167.0
PJD1_k127_3244840_11 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000005702 135.0
PJD1_k127_3244840_12 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.00000000000000000000000005529 114.0
PJD1_k127_3244840_13 ATP-binding protein K04562 - - 0.00000000000000000000002208 113.0
PJD1_k127_3244840_14 Phosphopantetheine attachment site K02078 - - 0.00000000000000000003104 95.0
PJD1_k127_3244840_15 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000004674 53.0
PJD1_k127_3244840_16 PQQ-like domain - - - 0.0006281 49.0
PJD1_k127_3244840_17 - - - - 0.0009174 44.0
PJD1_k127_3244840_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 558.0
PJD1_k127_3244840_3 Tryptophan halogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 319.0
PJD1_k127_3244840_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 283.0
PJD1_k127_3244840_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000002016 262.0
PJD1_k127_3244840_6 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000006125 249.0
PJD1_k127_3244840_7 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000001333 234.0
PJD1_k127_3244840_8 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000001125 188.0
PJD1_k127_3244840_9 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000008052 187.0
PJD1_k127_3271937_0 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 516.0
PJD1_k127_3271937_1 N-acetyltransferase K00675 - 2.3.1.118 0.00000000000000000000009907 104.0
PJD1_k127_3311954_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000871 387.0
PJD1_k127_3311954_1 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001156 293.0
PJD1_k127_3311954_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001916 278.0
PJD1_k127_3311954_3 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016020,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000002241 249.0
PJD1_k127_3311954_4 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.00000000000000000000000000000000000000000000000002795 192.0
PJD1_k127_3311954_5 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000003847 186.0
PJD1_k127_3311954_6 TIGRFAM VWFA-related Acidobacterial domain - - - 0.00000000003931 76.0
PJD1_k127_3316760_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 6.712e-245 773.0
PJD1_k127_3316760_1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007123 460.0
PJD1_k127_3316760_2 AlkA N-terminal domain K13529,K13530 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000007164 211.0
PJD1_k127_3316760_3 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000002626 201.0
PJD1_k127_3316760_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000003192 199.0
PJD1_k127_3316760_5 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000009975 181.0
PJD1_k127_3316760_6 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000006537 181.0
PJD1_k127_3316760_7 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000008252 165.0
PJD1_k127_3316760_8 Thioesterase superfamily K07107 - - 0.00000000000003707 78.0
PJD1_k127_3316760_9 Tetratricopeptide repeat - - - 0.0001679 54.0
PJD1_k127_3322390_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 453.0
PJD1_k127_3322390_1 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009916 365.0
PJD1_k127_3322390_2 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009745 291.0
PJD1_k127_3322390_3 thiolester hydrolase activity K06889 - - 0.00000000000000000000000000000000000002088 156.0
PJD1_k127_3322390_4 - - - - 0.0000000000000000000000000000000000001126 150.0
PJD1_k127_3322390_5 - - - - 0.00000000006575 74.0
PJD1_k127_3327579_0 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008614 526.0
PJD1_k127_3327579_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 403.0
PJD1_k127_3327579_2 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003634 274.0
PJD1_k127_3327579_3 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000002146 216.0
PJD1_k127_3327579_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000002983 173.0
PJD1_k127_3381382_0 nitrite transmembrane transporter activity K02575 - - 3.868e-219 685.0
PJD1_k127_3381382_1 Major Facilitator Superfamily K02575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 555.0
PJD1_k127_3381382_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 505.0
PJD1_k127_3381382_3 C4-dicarboxylate transporter malic acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007697 447.0
PJD1_k127_3381382_4 PFAM Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007454 415.0
PJD1_k127_3381382_5 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004568 248.0
PJD1_k127_3381382_6 Domain of Unknown function (DUF542) K07322 - - 0.00000000000000000000000000000000000000000000000000001155 198.0
PJD1_k127_3381382_7 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000007122 186.0
PJD1_k127_3381382_8 cyclic nucleotide-binding K01420,K10914 - - 0.0000000000000000000000000000000000000000000000604 177.0
PJD1_k127_3381382_9 hemerythrin HHE cation binding domain - - - 0.0000000000000000000000001919 111.0
PJD1_k127_3390220_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 1.337e-253 810.0
PJD1_k127_3390220_1 PFAM deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 535.0
PJD1_k127_3390220_10 YjbR - - - 0.00000000000000000000000000000000000001204 147.0
PJD1_k127_3390220_11 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.00000000000000000000000000000000000004751 149.0
PJD1_k127_3390220_12 Penicillinase repressor - - - 0.00000000000000000000000000000000000005251 147.0
PJD1_k127_3390220_13 PFAM Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000002553 141.0
PJD1_k127_3390220_14 PFAM Cyclic nucleotide-binding K10914,K21563 - - 0.000000000000000000000000000005564 128.0
PJD1_k127_3390220_15 radical SAM domain protein - - - 0.0000000007885 71.0
PJD1_k127_3390220_16 response regulator K07666 - - 0.00000007628 59.0
PJD1_k127_3390220_17 Tetratricopeptide repeat - - - 0.0000001457 65.0
PJD1_k127_3390220_18 PFAM sigma-54 factor interaction domain-containing protein K21405 - - 0.00001999 53.0
PJD1_k127_3390220_2 Alginate export - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008421 406.0
PJD1_k127_3390220_3 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 377.0
PJD1_k127_3390220_4 alpha/beta hydrolase fold K00641 - 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 310.0
PJD1_k127_3390220_5 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000002179 209.0
PJD1_k127_3390220_6 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000003121 210.0
PJD1_k127_3390220_7 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.00000000000000000000000000000000000000000007463 168.0
PJD1_k127_3390220_8 - - - - 0.000000000000000000000000000000000000000003047 178.0
PJD1_k127_3390220_9 YwiC-like protein - - - 0.00000000000000000000000000000000000000004086 168.0
PJD1_k127_3413263_0 PFAM Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 467.0
PJD1_k127_3413263_1 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 320.0
PJD1_k127_3413263_2 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005162 312.0
PJD1_k127_3413263_3 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000005232 250.0
PJD1_k127_3413263_4 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000000000000001479 231.0
PJD1_k127_3413263_5 - K01865 - 5.4.4.1 0.000000000000000000000000000000003781 133.0
PJD1_k127_3413263_6 Peptidase family M23 - - - 0.000000000000000000000000002265 126.0
PJD1_k127_3414915_0 Aconitase C-terminal domain K01703 - 4.2.1.33,4.2.1.35 6.912e-283 886.0
PJD1_k127_3414915_1 3-demethylubiquinone-9 3-O-methyltransferase activity K07011,K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 411.0
PJD1_k127_3414915_2 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 408.0
PJD1_k127_3414915_3 mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000001261 239.0
PJD1_k127_3414915_4 PFAM Integral membrane protein DUF92 - GO:0005575,GO:0016020 - 0.0000000000000000000000000000000001131 149.0
PJD1_k127_3414915_5 Phytol kinase K15892,K18678 - 2.7.1.182,2.7.1.216 0.0000000000003803 82.0
PJD1_k127_343087_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008741 621.0
PJD1_k127_343087_1 COGs COG0674 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase alpha subunit K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 511.0
PJD1_k127_343087_2 TIGRFAM 2-oxoacid acceptor oxidoreductase, beta subunit, pyruvate 2-ketoisovalerate family K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002299 283.0
PJD1_k127_343087_3 PFAM iron dependent repressor K03709 - - 0.0000000000000000000000000000000000000000000000004683 183.0
PJD1_k127_3434923_0 COG0798 Arsenite efflux pump ACR3 and related K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 478.0
PJD1_k127_3434923_1 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 449.0
PJD1_k127_3434923_10 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.000000000000000000000000000000000000000706 158.0
PJD1_k127_3434923_11 PFAM Endonuclease Exonuclease phosphatase family - - - 0.00000000000000000000000000000000000555 147.0
PJD1_k127_3434923_12 - - - - 0.0000000000000000000000000008992 117.0
PJD1_k127_3434923_2 Putative zinc-binding metallo-peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 417.0
PJD1_k127_3434923_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 398.0
PJD1_k127_3434923_4 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 387.0
PJD1_k127_3434923_5 Family of unknown function (DUF1028) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 332.0
PJD1_k127_3434923_6 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 322.0
PJD1_k127_3434923_7 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000002244 226.0
PJD1_k127_3434923_8 Protein of unknown function (DUF1499) - - - 0.000000000000000000000000000000000000000000000001152 182.0
PJD1_k127_3434923_9 AhpC/TSA family - - - 0.00000000000000000000000000000000000000006878 162.0
PJD1_k127_3492284_0 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 384.0
PJD1_k127_3492284_1 response regulator K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 378.0
PJD1_k127_3492284_11 PFAM glycosyl transferase group 1 - - - 0.000007581 49.0
PJD1_k127_3492284_12 bacterial OsmY and nodulation domain - - - 0.0008379 49.0
PJD1_k127_3492284_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 387.0
PJD1_k127_3492284_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13598 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 366.0
PJD1_k127_3492284_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000301 272.0
PJD1_k127_3492284_5 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000000000000000000001012 255.0
PJD1_k127_3492284_6 PFAM sigma-54 factor interaction domain-containing protein K13599 - - 0.000000000000000000000000000001864 125.0
PJD1_k127_3492284_7 Belongs to the ompA family K03286 - - 0.00000000000000002811 95.0
PJD1_k127_3492284_8 Belongs to the UPF0102 family K07460 - - 0.0000000000000007998 85.0
PJD1_k127_3492284_9 Domain of unknown function (DUF4390) - - - 0.0000000016 67.0
PJD1_k127_3494881_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1073.0
PJD1_k127_3494881_1 Fumarase C C-terminus K01744 - 4.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007963 498.0
PJD1_k127_3494881_2 hydro-lyase, Fe-S type, tartrate fumarate subfamily, alpha subunit K01677 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 368.0
PJD1_k127_3494881_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000002622 268.0
PJD1_k127_3494881_4 Catalyzes the reversible hydration of fumarate to (S)- malate K01676,K03780 - 4.2.1.2,4.2.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000001375 252.0
PJD1_k127_3494881_5 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000301 244.0
PJD1_k127_3494881_6 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.0000000000000000000000000000000000000000323 166.0
PJD1_k127_3494881_7 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000003861 105.0
PJD1_k127_3494881_8 - - - - 0.000000001341 66.0
PJD1_k127_3516153_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 617.0
PJD1_k127_3516153_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 405.0
PJD1_k127_3516153_10 Ribosomal protein S5, C-terminal domain K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000005508 207.0
PJD1_k127_3516153_11 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000009991 192.0
PJD1_k127_3516153_12 Forms part of the polypeptide exit tunnel K02926 - - 0.00000000000000000000000000000000000000000000000000001479 204.0
PJD1_k127_3516153_13 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000005025 184.0
PJD1_k127_3516153_14 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000001834 176.0
PJD1_k127_3516153_15 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000001847 177.0
PJD1_k127_3516153_16 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000346 169.0
PJD1_k127_3516153_17 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000000002171 153.0
PJD1_k127_3516153_18 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000002319 148.0
PJD1_k127_3516153_19 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000002731 132.0
PJD1_k127_3516153_2 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006676 303.0
PJD1_k127_3516153_20 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000001483 127.0
PJD1_k127_3516153_21 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000003038 104.0
PJD1_k127_3516153_22 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000001213 99.0
PJD1_k127_3516153_23 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000001459 99.0
PJD1_k127_3516153_24 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000001515 102.0
PJD1_k127_3516153_25 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000222 77.0
PJD1_k127_3516153_26 Ribosomal protein L36 K02919 - - 0.00000000000009111 71.0
PJD1_k127_3516153_27 Ribosomal L29 protein K02904 - - 0.00000000000172 68.0
PJD1_k127_3516153_28 Ribosomal protein L30 K02907 - - 0.000000000004356 68.0
PJD1_k127_3516153_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006815 286.0
PJD1_k127_3516153_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003103 261.0
PJD1_k127_3516153_5 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000346 255.0
PJD1_k127_3516153_6 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000001493 254.0
PJD1_k127_3516153_7 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000008681 242.0
PJD1_k127_3516153_8 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000005416 224.0
PJD1_k127_3516153_9 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000002331 211.0
PJD1_k127_3516496_0 Lipocalin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 375.0
PJD1_k127_3516496_1 PFAM beta-lactamase K17836 - 3.5.2.6 0.00000000000000000000000000006772 127.0
PJD1_k127_3516496_2 COG0671 Membrane-associated phospholipid phosphatase K19302 - 3.6.1.27 0.00000000000000000000000001522 120.0
PJD1_k127_3516496_3 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000009547 121.0
PJD1_k127_3516496_4 cyclic nucleotide binding K10914 - - 0.000009531 59.0
PJD1_k127_3585141_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1056.0
PJD1_k127_3585141_1 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000001119 247.0
PJD1_k127_3585141_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000001917 241.0
PJD1_k127_3585141_4 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000007804 125.0
PJD1_k127_3585141_5 Outer membrane efflux protein K12543 - - 0.0000000000004432 81.0
PJD1_k127_3585141_6 Bacterial regulatory proteins, tetR family K13770 - - 0.000000000004872 75.0
PJD1_k127_3608560_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000665 220.0
PJD1_k127_3608560_1 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000001151 183.0
PJD1_k127_3608560_2 Peptidase S46 - - - 0.00000000000000000008749 104.0
PJD1_k127_3608560_3 ATPase activity - - - 0.000000000000005434 84.0
PJD1_k127_3608560_4 Forkhead associated domain - - - 0.00000000187 70.0
PJD1_k127_3608560_5 tetratricopeptide repeat - - - 0.0003471 53.0
PJD1_k127_3617211_0 haloacid dehalogenase-like hydrolase K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000000002609 187.0
PJD1_k127_3617211_1 Soluble lytic murein transglycosylase K08309 - - 0.00000000000000000000000000000000024 153.0
PJD1_k127_3617211_2 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.000000000000000000000000000000001567 139.0
PJD1_k127_3617211_3 nuclear chromosome segregation - - - 0.00000000000000000000000000000007144 140.0
PJD1_k127_3617211_4 von Willebrand factor, type A - - - 0.00000000000000000000000000008957 134.0
PJD1_k127_3617211_5 Regulatory protein, FmdB - - - 0.0000000000000000008093 90.0
PJD1_k127_3617211_6 Restriction endonuclease - - - 0.000000001591 68.0
PJD1_k127_3641968_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 7.245e-317 996.0
PJD1_k127_3641968_1 Sigma-54 interaction domain K02584,K07713,K15836,K21009 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 307.0
PJD1_k127_3641968_2 GTP binding K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006521 276.0
PJD1_k127_3641968_3 Lytic transglycosylase catalytic K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003617 269.0
PJD1_k127_3641968_4 DNA polymerase alpha chain like domain K07053,K20859 - 3.1.3.97,3.1.4.57 0.0000000000000000000000000000000000000000000007414 174.0
PJD1_k127_3641968_5 antisigma factor binding - - - 0.0000000000000000000004581 104.0
PJD1_k127_3641968_6 Sigma factor PP2C-like phosphatases - - - 0.0000000000000000000396 103.0
PJD1_k127_3641968_7 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000001437 98.0
PJD1_k127_3641968_8 sigma factor antagonist activity K04757 - 2.7.11.1 0.00000000002171 71.0
PJD1_k127_3648192_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 3.244e-228 724.0
PJD1_k127_3648192_1 ATP-dependent DNA helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 619.0
PJD1_k127_3648192_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601,K03797 - 3.1.11.6,3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 334.0
PJD1_k127_3648192_3 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002905 282.0
PJD1_k127_3648192_4 FtsJ-like methyltransferase K06442 GO:0000154,GO:0001510,GO:0001897,GO:0001906,GO:0001907,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0019835,GO:0019836,GO:0022613,GO:0031167,GO:0031640,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035821,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044003,GO:0044004,GO:0044085,GO:0044179,GO:0044237,GO:0044238,GO:0044260,GO:0044364,GO:0044403,GO:0044419,GO:0044764,GO:0046483,GO:0051701,GO:0051704,GO:0051715,GO:0051801,GO:0051817,GO:0051818,GO:0051883,GO:0052331,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000969 263.0
PJD1_k127_3648192_5 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000008481 263.0
PJD1_k127_3648192_6 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000003271 239.0
PJD1_k127_3648192_7 Domain of unknown function (DUF4388) - - - 0.0000000000000006276 87.0
PJD1_k127_3648192_8 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000001929 73.0
PJD1_k127_3648192_9 mttA/Hcf106 family K03116 - - 0.00000000001914 68.0
PJD1_k127_3659343_0 COG0405 Gamma-glutamyltransferase K00681 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007941 552.0
PJD1_k127_3659343_1 peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005427 543.0
PJD1_k127_3659343_10 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000002952 237.0
PJD1_k127_3659343_11 - - - - 0.00000000000000000000000000000000000000004865 166.0
PJD1_k127_3659343_12 Histidine kinase K03407 - 2.7.13.3 0.000000000002722 73.0
PJD1_k127_3659343_2 argininosuccinate synthase K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 511.0
PJD1_k127_3659343_3 MatE K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 437.0
PJD1_k127_3659343_4 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710,K12450 GO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005975,GO:0005976,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008460,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019305,GO:0019438,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044464,GO:0045226,GO:0046379,GO:0046383,GO:0046483,GO:0048037,GO:0050662,GO:0051287,GO:0055086,GO:0070404,GO:0071704,GO:0071944,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 4.2.1.46,4.2.1.76 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 430.0
PJD1_k127_3659343_5 argininosuccinate lyase K01755,K14681 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 404.0
PJD1_k127_3659343_6 Ankyrin repeats (3 copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008525 346.0
PJD1_k127_3659343_7 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 336.0
PJD1_k127_3659343_8 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003663 297.0
PJD1_k127_3659343_9 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000001674 233.0
PJD1_k127_3672280_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004277 524.0
PJD1_k127_3672280_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003125 280.0
PJD1_k127_3672280_2 PFAM phospholipase Carboxylesterase - - - 0.0000000000000000000000000000000000002973 148.0
PJD1_k127_3672280_3 Domain of unknown function (DUF4126) - - - 0.000000000000000000000004241 109.0
PJD1_k127_3672280_4 Domain of unknown function (DUF4388) - - - 0.00000000003275 76.0
PJD1_k127_3672280_5 PFAM Transglycosylase associated protein - - - 0.00000000328 64.0
PJD1_k127_3672280_6 - - - - 0.00002655 53.0
PJD1_k127_3672280_7 negative regulation of transcription, DNA-templated - - - 0.00005146 53.0
PJD1_k127_3689214_0 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 452.0
PJD1_k127_3689214_1 PFAM PHP domain K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 385.0
PJD1_k127_3689214_2 Cation efflux family K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000201 256.0
PJD1_k127_3689214_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000009957 170.0
PJD1_k127_3689214_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000882 117.0
PJD1_k127_3689214_5 PFAM Tetratricopeptide repeat - - - 0.0001048 55.0
PJD1_k127_3689214_6 general secretion pathway protein K02453 - - 0.0001225 52.0
PJD1_k127_3731320_0 alcohol dehydrogenase K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008535 536.0
PJD1_k127_3731320_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 461.0
PJD1_k127_3731320_10 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.00000000000000000002849 97.0
PJD1_k127_3731320_2 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 381.0
PJD1_k127_3731320_3 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001483 243.0
PJD1_k127_3731320_4 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000006802 231.0
PJD1_k127_3731320_5 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000006063 184.0
PJD1_k127_3731320_6 DinB family - - - 0.00000000000000000000000000000000000000000004487 166.0
PJD1_k127_3731320_7 DNA primase activity - - - 0.00000000000000000000000000000000000000000004523 169.0
PJD1_k127_3731320_8 - - - - 0.000000000000000000000279 102.0
PJD1_k127_3731320_9 amine oxidase K00276 - 1.4.3.21 0.00000000000000000001801 105.0
PJD1_k127_3741561_0 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 471.0
PJD1_k127_3741561_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 454.0
PJD1_k127_3741561_10 PFAM Methyltransferase type - - - 0.00000000000000000000000000000000000000000000000000002855 198.0
PJD1_k127_3741561_11 HAD-hyrolase-like K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000001147 151.0
PJD1_k127_3741561_12 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000001671 149.0
PJD1_k127_3741561_13 Methyltransferase type 11 - - - 0.00000000000000000000000000000000003624 143.0
PJD1_k127_3741561_14 COGs COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000002248 124.0
PJD1_k127_3741561_15 Methyltransferase FkbM - - - 0.0000000001581 64.0
PJD1_k127_3741561_16 - - - - 0.000000001359 71.0
PJD1_k127_3741561_17 Psort location CytoplasmicMembrane, score K09153 - - 0.000000005884 68.0
PJD1_k127_3741561_18 Glycosyl transferases group 1 - - - 0.00000008756 64.0
PJD1_k127_3741561_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 437.0
PJD1_k127_3741561_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 390.0
PJD1_k127_3741561_4 PFAM amine oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 387.0
PJD1_k127_3741561_5 GHMP kinases C terminal K07031 - 2.7.1.168 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 344.0
PJD1_k127_3741561_6 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 320.0
PJD1_k127_3741561_7 Transaldolase K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 295.0
PJD1_k127_3741561_8 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001593 255.0
PJD1_k127_3741561_9 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000003152 223.0
PJD1_k127_3791031_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 3.502e-289 893.0
PJD1_k127_3791031_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 6.681e-227 716.0
PJD1_k127_3791031_2 Glycosyl transferase 4-like K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 557.0
PJD1_k127_3791031_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 335.0
PJD1_k127_3791031_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004349 331.0
PJD1_k127_3791031_5 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000006015 239.0
PJD1_k127_3791031_6 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000006808 199.0
PJD1_k127_3791031_7 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000000009487 153.0
PJD1_k127_3791031_8 - - - - 0.0000000000000000000000001616 113.0
PJD1_k127_3791031_9 von Willebrand factor type A domain K07114 - - 0.0000000000000002476 81.0
PJD1_k127_3810887_0 Outer membrane receptor - - - 2.561e-220 719.0
PJD1_k127_3810887_1 COG2723 Beta-glucosidase 6-phospho-beta-glucosidase beta- galactosidase K05350 - 3.2.1.21 1.923e-204 644.0
PJD1_k127_3810887_2 LacI family K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 318.0
PJD1_k127_3812682_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1118.0
PJD1_k127_3812682_1 nitrite transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 488.0
PJD1_k127_3812682_2 Putative diguanylate phosphodiesterase K21023 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 492.0
PJD1_k127_3812682_3 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007076 428.0
PJD1_k127_3812682_4 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 313.0
PJD1_k127_3812682_5 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.0000000000000000000000000000000000000000000000000006926 191.0
PJD1_k127_3812682_6 hemerythrin HHE cation binding domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000002694 145.0
PJD1_k127_3812682_7 - - - - 0.00000000000003027 75.0
PJD1_k127_3814027_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0 1325.0
PJD1_k127_3814027_1 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 1.654e-246 792.0
PJD1_k127_3814027_2 Protein of unknown function (DUF962) - - - 0.0000000005569 61.0
PJD1_k127_3814027_3 Glutaredoxin - - - 0.000000001376 63.0
PJD1_k127_3814027_4 membrane protein domain - - - 0.000000008008 64.0
PJD1_k127_3814027_5 - - - - 0.000001114 55.0
PJD1_k127_3854401_0 elongation factor G K02355 - - 9.268e-232 739.0
PJD1_k127_3854401_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007818 280.0
PJD1_k127_3854401_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000001489 260.0
PJD1_k127_3872472_0 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 370.0
PJD1_k127_3872472_1 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001228 274.0
PJD1_k127_3872472_2 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001922 274.0
PJD1_k127_3872472_3 PFAM Amidohydrolase family K01443 - 3.5.1.25 0.000000000000000000000000001071 121.0
PJD1_k127_3872472_4 cell adhesion - - - 0.00000000000002216 81.0
PJD1_k127_390265_0 Oligoendopeptidase f - - - 5.557e-247 796.0
PJD1_k127_390265_1 cyclic nucleotide-binding K01420,K10914 - - 0.00000000000000000000000000000000000000000000000000000000000606 215.0
PJD1_k127_390265_2 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000001294 202.0
PJD1_k127_390265_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000000000000000000000000000000000000312 165.0
PJD1_k127_3938121_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008603 559.0
PJD1_k127_3938121_1 Divalent cation transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 448.0
PJD1_k127_3938121_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 364.0
PJD1_k127_3938121_3 ErfK ybiS ycfS ynhG family protein K19234 - - 0.000000000000000000000000000000000000000000000000004738 194.0
PJD1_k127_3938121_4 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000817 145.0
PJD1_k127_3938121_5 protein conserved in bacteria K09964 - - 0.000000000000000000000000000001641 124.0
PJD1_k127_3938121_6 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000009171 85.0
PJD1_k127_3938121_7 3-methyladenine DNA glycosylase K01246 - 3.2.2.20 0.00000000000001424 73.0
PJD1_k127_3963351_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0 1925.0
PJD1_k127_3963351_1 receptor K16091 - - 4.385e-211 680.0
PJD1_k127_3963351_10 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000003044 169.0
PJD1_k127_3963351_11 Ferric uptake regulator family K09825 - - 0.0000000000000000000000000001411 119.0
PJD1_k127_3963351_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 411.0
PJD1_k127_3963351_3 binding-protein-dependent transport systems inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 409.0
PJD1_k127_3963351_4 PFAM CheR methyltransferase, SAM binding domain K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004601 391.0
PJD1_k127_3963351_5 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 298.0
PJD1_k127_3963351_6 TOBE domain K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002632 295.0
PJD1_k127_3963351_7 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K04756 - - 0.0000000000000000000000000000000000000000000000000000000000000000001297 235.0
PJD1_k127_3963351_8 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000002796 207.0
PJD1_k127_3963351_9 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000007687 203.0
PJD1_k127_3964698_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006 - 2.7.9.1 0.0 1107.0
PJD1_k127_3964698_1 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 - 4.4.1.1,4.4.1.2,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 489.0
PJD1_k127_3964698_10 Type II/IV secretion system protein K02454,K02652 - - 0.000000000009201 76.0
PJD1_k127_3964698_11 alpha beta - - - 0.0007048 51.0
PJD1_k127_3964698_2 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008199 405.0
PJD1_k127_3964698_3 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046 347.0
PJD1_k127_3964698_4 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 323.0
PJD1_k127_3964698_5 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005662 287.0
PJD1_k127_3964698_6 Glycyl-tRNA synthetase alpha K01878 - 6.1.1.14 0.000000000000000000000000000000000000000009621 156.0
PJD1_k127_3964698_7 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000005172 158.0
PJD1_k127_3964698_8 Membrane-associated protein - - - 0.000000000000000000000000000000001691 136.0
PJD1_k127_3964698_9 Probable zinc-ribbon domain - - - 0.0000000000000000000000000000001527 128.0
PJD1_k127_3972613_0 FAD linked oxidases, C-terminal domain K06911 - - 0.0 1238.0
PJD1_k127_3972613_1 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 490.0
PJD1_k127_3972613_10 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K14981 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001793 249.0
PJD1_k127_3972613_11 COG0642 Signal transduction histidine kinase K14980 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000003809 249.0
PJD1_k127_3972613_12 TonB-dependent Receptor Plug K16092 - - 0.0000000000000000000000000000000000000000000000000000000000001489 235.0
PJD1_k127_3972613_13 methyltransferase - - - 0.000000000000000000000000000000000000000000008989 171.0
PJD1_k127_3972613_14 Sortase family K07284 - 3.4.22.70 0.000000000000000000000000000000000000006964 160.0
PJD1_k127_3972613_15 Stress-induced bacterial acidophilic repeat motif - - - 0.0000000000000000000000000944 111.0
PJD1_k127_3972613_16 - - - - 0.0000000000029 77.0
PJD1_k127_3972613_17 phosphatase homologous to the C-terminal domain of histone macroH2A1 - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000117 63.0
PJD1_k127_3972613_2 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 488.0
PJD1_k127_3972613_3 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 439.0
PJD1_k127_3972613_4 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003844 357.0
PJD1_k127_3972613_5 metallophosphoesterase K07096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 321.0
PJD1_k127_3972613_6 Nucleotidyl transferase of unknown function (DUF2204) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 320.0
PJD1_k127_3972613_7 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 325.0
PJD1_k127_3972613_8 GTP binding K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002945 282.0
PJD1_k127_3972613_9 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009898 257.0
PJD1_k127_4056325_0 ATP dependent DNA ligase C terminal region K10747 GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0030312,GO:0033554,GO:0034641,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 486.0
PJD1_k127_4056325_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 427.0
PJD1_k127_4056325_2 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 333.0
PJD1_k127_4056325_3 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000002286 181.0
PJD1_k127_4056325_4 PspC domain - - - 0.000000000000000003163 86.0
PJD1_k127_4056325_5 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000000006309 88.0
PJD1_k127_4058101_0 ABC transporter K06020 - 3.6.3.25 3.588e-291 900.0
PJD1_k127_4058101_1 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 3.921e-218 687.0
PJD1_k127_4058101_2 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 385.0
PJD1_k127_4058101_3 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007893 287.0
PJD1_k127_4058101_4 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003098 273.0
PJD1_k127_4058101_5 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000001419 261.0
PJD1_k127_4058101_6 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000003807 76.0
PJD1_k127_4058101_7 Transposase IS116/IS110/IS902 family - - - 0.0000264 51.0
PJD1_k127_4073556_0 TonB dependent receptor K02014,K16089 - - 3.253e-237 761.0
PJD1_k127_4073556_1 YaeQ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001398 244.0
PJD1_k127_4073556_2 GTP-binding protein TypA K06207 - - 0.0000000000000000000000000000000392 126.0
PJD1_k127_4073556_3 Belongs to the UPF0310 family - - - 0.0000000000000000000000000003049 119.0
PJD1_k127_4073556_4 Domain of unknown function (DUF4388) - - - 0.0000001056 61.0
PJD1_k127_4073556_5 Chlorophyllase - - - 0.0000001613 64.0
PJD1_k127_4088941_0 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 418.0
PJD1_k127_4088941_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 398.0
PJD1_k127_4088941_2 peptidase K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000001743 214.0
PJD1_k127_4088941_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000004277 168.0
PJD1_k127_4088941_4 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000001318 154.0
PJD1_k127_4088941_5 histone H2A K63-linked ubiquitination K10914 - - 0.00000000000000000000000000000002912 137.0
PJD1_k127_4088941_6 - - - - 0.000000002064 63.0
PJD1_k127_4106920_0 Asparaginyl-tRNA synthetase K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 583.0
PJD1_k127_4106920_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007681 526.0
PJD1_k127_4106920_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000004962 269.0
PJD1_k127_4106920_3 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005547 261.0
PJD1_k127_4106920_4 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000007175 182.0
PJD1_k127_4106920_5 Poly A polymerase, head domain K00970 - 2.7.7.19 0.00000000000000000000000000008288 129.0
PJD1_k127_4106920_6 PFAM Dynamin family protein - - - 0.00001271 50.0
PJD1_k127_4124799_0 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 403.0
PJD1_k127_4124799_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 352.0
PJD1_k127_4124799_2 Carbon-nitrogen hydrolase K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001133 282.0
PJD1_k127_4124799_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002106 244.0
PJD1_k127_4136935_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 539.0
PJD1_k127_4136935_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008475 458.0
PJD1_k127_4136935_2 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 406.0
PJD1_k127_4136935_3 Uncharacterized protein conserved in bacteria (DUF2200) - - - 0.00000000000000000000000000000000000000000000000000000002847 199.0
PJD1_k127_4136935_4 nuclease K01174 - 3.1.31.1 0.0000000000000000000000000000442 123.0
PJD1_k127_4136935_5 Protein of Unknown function (DUF2784) - - - 0.0000000000000000000002913 106.0
PJD1_k127_4136935_6 helix_turn_helix, Lux Regulon - - - 0.00000000000002166 82.0
PJD1_k127_4136935_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000005765 59.0
PJD1_k127_4169116_0 Heat shock 70 kDa protein K04043 - - 9.245e-232 732.0
PJD1_k127_4169116_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 416.0
PJD1_k127_4169116_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000001482 243.0
PJD1_k127_4169116_3 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000003777 231.0
PJD1_k127_4169116_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.0000000000000000000000000000000001857 136.0
PJD1_k127_4169116_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000003572 136.0
PJD1_k127_4169116_6 peptidyl-prolyl cis-trans isomerase activity K03769,K07533 - 5.2.1.8 0.0002443 51.0
PJD1_k127_4202250_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 3.117e-202 653.0
PJD1_k127_4202250_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 370.0
PJD1_k127_4202250_10 phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000008732 177.0
PJD1_k127_4202250_11 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.000000000000000000000000002044 116.0
PJD1_k127_4202250_12 Phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000006192 84.0
PJD1_k127_4202250_2 Phosphate transport system permease K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006524 359.0
PJD1_k127_4202250_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 361.0
PJD1_k127_4202250_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01524,K07012 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 321.0
PJD1_k127_4202250_5 TIGRFAM MazG family protein K02428,K02499,K04765 - 3.6.1.66,3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000004664 264.0
PJD1_k127_4202250_6 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007211 243.0
PJD1_k127_4202250_7 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000007486 204.0
PJD1_k127_4202250_8 PFAM response regulator receiver K07657 - - 0.00000000000000000000000000000000000000000000000000001673 197.0
PJD1_k127_4202250_9 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000001803 214.0
PJD1_k127_4223725_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K03918 - 2.6.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005072 517.0
PJD1_k127_4223725_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006719 464.0
PJD1_k127_4223725_10 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000003593 129.0
PJD1_k127_4223725_11 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000006346 79.0
PJD1_k127_4223725_12 fatty acid desaturase transmembrane protein - - - 0.000000000000008348 85.0
PJD1_k127_4223725_13 Psort location CytoplasmicMembrane, score - - - 0.00000000000004138 87.0
PJD1_k127_4223725_2 Peptidase family S58 K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000321 446.0
PJD1_k127_4223725_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 442.0
PJD1_k127_4223725_4 Integrase catalytic - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007806 252.0
PJD1_k127_4223725_5 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000001235 239.0
PJD1_k127_4223725_6 PFAM Haloacid dehalogenase domain protein hydrolase K01560,K07025 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000005493 239.0
PJD1_k127_4223725_7 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000005675 205.0
PJD1_k127_4223725_8 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000000002249 184.0
PJD1_k127_4223725_9 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000000000008604 164.0
PJD1_k127_4239245_0 ATP-dependent helicase activity K10844 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007614 435.0
PJD1_k127_4239245_1 PFAM asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 404.0
PJD1_k127_4239245_2 Alanine-glyoxylate amino-transferase K05825 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 345.0
PJD1_k127_4239245_3 Peptidase family M20/M25/M40 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001818 267.0
PJD1_k127_4239245_4 thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.00000000000000000000000000000000000000000000000000000002436 203.0
PJD1_k127_4239245_5 IstB-like ATP binding protein K02315 - - 0.00000000000000000000000000000000000000000000000005205 186.0
PJD1_k127_4239245_6 Transcriptional regulatory protein, C terminal K10682 - - 0.00000000000000001231 89.0
PJD1_k127_4239245_7 Bacterial membrane protein, YfhO - - - 0.0000000000004767 79.0
PJD1_k127_4246540_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019904,GO:0022607,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043335,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004511 583.0
PJD1_k127_4246540_1 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 437.0
PJD1_k127_4246540_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 437.0
PJD1_k127_4246540_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K13926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 404.0
PJD1_k127_4246540_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 362.0
PJD1_k127_4246540_5 PFAM secretion protein HlyD family protein K01993,K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005259 312.0
PJD1_k127_4246540_6 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000002429 242.0
PJD1_k127_4246540_7 Pseudouridine synthase K06180 - 5.4.99.23 0.00000000000000000000000000007682 124.0
PJD1_k127_4246540_8 - - - - 0.00000000007444 70.0
PJD1_k127_4246540_9 NmrA-like family - - - 0.000005772 51.0
PJD1_k127_4248385_0 Surface antigen variable number K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001609 290.0
PJD1_k127_4248385_1 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001323 262.0
PJD1_k127_4248385_2 Tautomerase enzyme - - - 0.00000000000000000000000000000003707 134.0
PJD1_k127_4248385_3 - - - - 0.000000000000000000000000000002072 124.0
PJD1_k127_4248385_4 Chloramphenicol phosphotransferase-like protein K18554 - - 0.00000000000000000000000002819 115.0
PJD1_k127_4248385_5 - - - - 0.000000000000000000000007699 106.0
PJD1_k127_4248385_7 Beta-lactamase - - - 0.0009458 48.0
PJD1_k127_4252405_0 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 439.0
PJD1_k127_4252405_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 350.0
PJD1_k127_4252405_2 peptidase - - - 0.000000000000000000000000000000000004937 156.0
PJD1_k127_4252405_3 COG2771 DNA-binding HTH domain-containing proteins - - - 0.000000000000000000000000000001013 137.0
PJD1_k127_4253372_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004963 468.0
PJD1_k127_4253372_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000003183 274.0
PJD1_k127_4253372_2 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000000002766 183.0
PJD1_k127_4253372_3 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.0000000000000000000000000000000000000000000000005868 182.0
PJD1_k127_4253372_4 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000008679 181.0
PJD1_k127_4253372_5 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000004442 175.0
PJD1_k127_4253372_6 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.0000000000000000000000000000000003873 134.0
PJD1_k127_4253372_7 Domain of unknown function (DUF374) K09778 - - 0.00000000000000000000000001174 121.0
PJD1_k127_4253372_8 - - - - 0.0000000000000000006944 91.0
PJD1_k127_4253372_9 Domain of unknown function (DUF374) K09778 - - 0.0000001222 63.0
PJD1_k127_4276294_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1285.0
PJD1_k127_4276294_1 Glycosyl hydrolase-like 10 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 458.0
PJD1_k127_4276294_10 Thioesterase-like superfamily - - - 0.0000000000000000000000000000000000000000234 158.0
PJD1_k127_4276294_11 cold-shock protein K03704 - - 0.0000000000000000000000001716 109.0
PJD1_k127_4276294_12 involved in lipopolysaccharide - - - 0.00000006898 63.0
PJD1_k127_4276294_13 response regulator K02282 - - 0.000001276 57.0
PJD1_k127_4276294_2 PFAM Aminotransferase class I and II K00812,K14260 - 2.6.1.1,2.6.1.2,2.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 421.0
PJD1_k127_4276294_3 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 379.0
PJD1_k127_4276294_4 domain, Protein K20276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006228 363.0
PJD1_k127_4276294_5 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 297.0
PJD1_k127_4276294_6 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 292.0
PJD1_k127_4276294_7 Appr-1'-p processing enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000964 233.0
PJD1_k127_4276294_8 phosphatidylcholine synthase activity K01004 - 2.7.8.24 0.000000000000000000000000000000000000000000000000000000000000000001045 241.0
PJD1_k127_4276294_9 EVE domain - - - 0.0000000000000000000000000000000000000000000000000005236 188.0
PJD1_k127_4370410_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.73e-239 747.0
PJD1_k127_4370410_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016469,GO:0030312,GO:0032991,GO:0040007,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797 3.6.3.14 2.814e-231 725.0
PJD1_k127_4370410_10 Putative zinc- or iron-chelating domain - - - 0.000000000000000008985 92.0
PJD1_k127_4370410_11 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.0000000000000000444 88.0
PJD1_k127_4370410_12 Integral membrane sensor signal transduction histidine kinase K07642 - 2.7.13.3 0.0000005288 60.0
PJD1_k127_4370410_13 ATP synthase B/B' CF(0) K02109 - - 0.00003191 53.0
PJD1_k127_4370410_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 603.0
PJD1_k127_4370410_3 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 310.0
PJD1_k127_4370410_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 290.0
PJD1_k127_4370410_5 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001958 282.0
PJD1_k127_4370410_6 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006731 248.0
PJD1_k127_4370410_7 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000001457 111.0
PJD1_k127_4370410_8 Polymer-forming cytoskeletal - - - 0.000000000000000000000000573 108.0
PJD1_k127_4370410_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000004234 99.0
PJD1_k127_4378110_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.079e-276 864.0
PJD1_k127_4378110_1 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 539.0
PJD1_k127_4378110_2 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000001187 155.0
PJD1_k127_4378110_3 PFAM Response regulator receiver domain K02657 - - 0.000000000000007811 79.0
PJD1_k127_4412809_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 336.0
PJD1_k127_4412809_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 331.0
PJD1_k127_4412809_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 291.0
PJD1_k127_4412809_3 Outer membrane efflux protein - - - 0.000000000000000000000000000005043 134.0
PJD1_k127_4412809_4 Domain of unknown function (DUF4445) - - - 0.00000000001216 71.0
PJD1_k127_4412809_5 Belongs to the HesB IscA family K13628 - - 0.000000009909 60.0
PJD1_k127_4434788_0 Involved in the tonB-independent uptake of proteins K01256,K03641 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 468.0
PJD1_k127_4434788_1 Asparaginase K13051 - 3.4.19.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007037 293.0
PJD1_k127_4434788_2 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000009283 169.0
PJD1_k127_4434788_3 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000002226 148.0
PJD1_k127_4434788_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000002316 153.0
PJD1_k127_4434788_5 Recombination protein O C terminal K03584 - - 0.000000000000000000001163 104.0
PJD1_k127_4434788_6 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.0000000000000000003255 98.0
PJD1_k127_4434788_7 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000008232 73.0
PJD1_k127_4471602_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007366 469.0
PJD1_k127_4471602_1 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000916 465.0
PJD1_k127_4471602_2 PFAM Na dependent nucleoside transporter K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 443.0
PJD1_k127_4471602_3 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006424 371.0
PJD1_k127_4471602_4 PFAM ABC transporter related K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008682 332.0
PJD1_k127_4471602_5 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 321.0
PJD1_k127_4471602_6 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001952 288.0
PJD1_k127_4471602_7 Cell division ATP-binding protein ftsE K09811,K09812 GO:0000166,GO:0000287,GO:0000910,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007049,GO:0008144,GO:0008150,GO:0008356,GO:0009898,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019897,GO:0019898,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0030145,GO:0030554,GO:0031234,GO:0032153,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042173,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043937,GO:0043938,GO:0044085,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0046677,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1902531 - 0.0000000000000000000000000000000000000000000000000000000000000000000000002914 255.0
PJD1_k127_4474123_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 325.0
PJD1_k127_4474123_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 309.0
PJD1_k127_4474123_2 COG0577 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006749 282.0
PJD1_k127_4474123_3 SpoIVB peptidase S55 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001158 290.0
PJD1_k127_4509836_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1418.0
PJD1_k127_4509836_1 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 343.0
PJD1_k127_4509836_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 300.0
PJD1_k127_4509836_3 Short repeat of unknown function (DUF308) - - - 0.00000000000000000001663 98.0
PJD1_k127_4509836_4 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000001534 94.0
PJD1_k127_4509836_5 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547 - - 0.00000000000000006262 91.0
PJD1_k127_4586486_0 Prokaryotic cytochrome b561 - - - 1.271e-204 658.0
PJD1_k127_4586486_1 NapC/NirT cytochrome c family, N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 563.0
PJD1_k127_4586486_2 PFAM Radical SAM K22226 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 498.0
PJD1_k127_4586486_3 sequence-specific DNA binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004528 428.0
PJD1_k127_4586486_4 Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 382.0
PJD1_k127_4586486_5 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002217 250.0
PJD1_k127_4586486_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000007593 96.0
PJD1_k127_4601400_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1058.0
PJD1_k127_4601400_1 Acetyl xylan esterase (AXE1) - - - 1.54e-263 828.0
PJD1_k127_4601400_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000001157 235.0
PJD1_k127_4601400_3 - - - - 0.000000000000000001822 85.0
PJD1_k127_4601400_4 P-type ATPase K17686 - 3.6.3.54 0.000000000005706 67.0
PJD1_k127_4643121_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001046 258.0
PJD1_k127_4643121_1 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000005684 260.0
PJD1_k127_4643121_2 Diacylglycerol kinase catalytic domain (presumed) - - - 0.00000000000000000000000000000000000000000000000000000000000001601 229.0
PJD1_k127_4643121_3 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000001299 126.0
PJD1_k127_4643121_4 COG3857 ATP-dependent nuclease, subunit B K16899 - 3.6.4.12 0.0000000000002832 81.0
PJD1_k127_4643532_0 Ribosomal protein S1 K02945,K03527 - 1.17.7.4 7.133e-195 624.0
PJD1_k127_4643532_1 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000852 249.0
PJD1_k127_4643532_2 Cytidylate kinase K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000003735 196.0
PJD1_k127_4643532_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000002034 153.0
PJD1_k127_4643532_4 Peptidase family S49 K04773 - - 0.000000007498 62.0
PJD1_k127_4674575_0 Serine/threonine phosphatases, family 2C, catalytic domain K01090 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000004151 233.0
PJD1_k127_4674575_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000007175 182.0
PJD1_k127_4674575_2 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000002031 166.0
PJD1_k127_4674575_3 - - - - 0.0000000000000000000000000003676 128.0
PJD1_k127_4674575_4 Domain of unknown function (DUF4115) - - - 0.000000000000000004958 94.0
PJD1_k127_4674575_5 Contains selenocysteine K07401 - - 0.0000000000004585 70.0
PJD1_k127_4674575_6 molecular chaperone K03686 - - 0.000000000001339 76.0
PJD1_k127_4674575_7 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0005285 46.0
PJD1_k127_4704139_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 581.0
PJD1_k127_4704139_1 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 522.0
PJD1_k127_4704139_2 SPTR Conserved repeat domain protein - - - 0.0000000000000000000000000000000000000000000000000000001825 224.0
PJD1_k127_4704139_3 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.000000000000000000000000000000000004363 148.0
PJD1_k127_4704139_4 PFAM Glucose-6-phosphate dehydrogenase subunit - - - 0.00000000000000000000000005118 120.0
PJD1_k127_4704139_5 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000002123 70.0
PJD1_k127_4704139_6 CAAX protease self-immunity K01992,K07052,K09696 - - 0.0004005 51.0
PJD1_k127_4729991_0 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 440.0
PJD1_k127_4729991_1 Major facilitator Superfamily K00943,K08217,K18833 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 422.0
PJD1_k127_4729991_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 363.0
PJD1_k127_4729991_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004273 334.0
PJD1_k127_4729991_4 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 307.0
PJD1_k127_4729991_5 NAD(P)H quinone oxidoreductase, PIG3 family K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006584 279.0
PJD1_k127_4729991_6 DNA mismatch repair protein MutT K01515 - 3.6.1.13 0.000000000000000000000000000000000000000006485 159.0
PJD1_k127_4729991_7 Outer membrane protein beta-barrel domain - - - 0.00000000001734 73.0
PJD1_k127_4729991_8 Bacterial regulatory proteins, tetR family - - - 0.0000000004976 68.0
PJD1_k127_4757471_0 Peptidase S46 - - - 2.272e-230 734.0
PJD1_k127_4757471_1 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 477.0
PJD1_k127_4757471_10 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0005456 53.0
PJD1_k127_4757471_2 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 404.0
PJD1_k127_4757471_3 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000134 243.0
PJD1_k127_4757471_4 hopanoid biosynthesis associated protein HpnK - - - 0.000000000000000000000000000000001974 139.0
PJD1_k127_4757471_5 PFAM S23 ribosomal protein - - - 0.0000000000000000000000003117 109.0
PJD1_k127_4757471_6 Domains REC, PAS, PAS, PP2C K07315 - 3.1.3.3 0.000000000000000000000005758 115.0
PJD1_k127_4757471_7 Endonuclease containing a URI domain K07461 - - 0.00000000000000000000003728 104.0
PJD1_k127_4757471_8 Methyltransferase domain - - - 0.0000000000000000000004522 106.0
PJD1_k127_4757471_9 SNARE associated Golgi protein - - - 0.0000000000006042 82.0
PJD1_k127_4766414_0 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 3.217e-195 627.0
PJD1_k127_4766414_1 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 526.0
PJD1_k127_4766414_10 Transcriptional regulatory protein, C terminal - - - 0.00000000000000002126 94.0
PJD1_k127_4766414_11 - - - - 0.00000000000002041 78.0
PJD1_k127_4766414_2 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 498.0
PJD1_k127_4766414_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 370.0
PJD1_k127_4766414_4 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006571 331.0
PJD1_k127_4766414_5 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.000000000000000000000000000000000000000000000000005482 188.0
PJD1_k127_4766414_6 Transcriptional regulator - - - 0.000000000000000000000000000000002803 143.0
PJD1_k127_4766414_7 quinone binding K00337 - 1.6.5.3 0.00000000000000000000000000000002254 128.0
PJD1_k127_4766414_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000000003021 130.0
PJD1_k127_4766414_9 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000003268 110.0
PJD1_k127_4770354_0 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 525.0
PJD1_k127_4770354_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912 477.0
PJD1_k127_4770354_10 Alpha beta hydrolase - - - 0.0000000000000001232 93.0
PJD1_k127_4770354_11 HIT domain K02503 - - 0.0000005795 59.0
PJD1_k127_4770354_2 peptidase activity, acting on L-amino acid peptides K07004,K09955 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000614 354.0
PJD1_k127_4770354_3 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003995 270.0
PJD1_k127_4770354_4 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000004297 240.0
PJD1_k127_4770354_5 Aldo Keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000005135 229.0
PJD1_k127_4770354_6 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000003167 232.0
PJD1_k127_4770354_7 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000000001008 192.0
PJD1_k127_4770354_8 Bacterial regulatory proteins, tetR family K13770 - - 0.0000000000000000000000000000000000000000002719 170.0
PJD1_k127_4770354_9 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000004589 169.0
PJD1_k127_4801691_0 Found in ATP-dependent protease La (LON) K01338 - 3.4.21.53 4.861e-231 740.0
PJD1_k127_4801691_1 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000106 265.0
PJD1_k127_4801691_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000005772 151.0
PJD1_k127_4801691_3 Outer membrane lipoprotein K05807,K08309 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.0000000000000000000000000000699 132.0
PJD1_k127_4801691_4 TIGRFAM tol-pal system protein YbgF - - - 0.0000000000000000003779 96.0
PJD1_k127_4801691_5 Serine threonine protein kinase K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.0000088 57.0
PJD1_k127_4801691_6 Tetratricopeptide repeat - - - 0.00008333 51.0
PJD1_k127_4802431_0 two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 430.0
PJD1_k127_4802431_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000002153 213.0
PJD1_k127_4802431_10 Tellurite resistance protein TerB K05801 - - 0.00058 51.0
PJD1_k127_4802431_2 helicase - - - 0.000000000000000000000000000000000005206 155.0
PJD1_k127_4802431_3 Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions K01519,K18532 GO:0003674,GO:0003824,GO:0004170,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008828,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035870,GO:0036217,GO:0036218,GO:0036219,GO:0036220,GO:0036221,GO:0036222,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0047840,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 2.7.4.3 0.000000000000000000000000000000000009886 143.0
PJD1_k127_4802431_4 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000005538 124.0
PJD1_k127_4802431_5 Domain of unknown function (DUF1802) - - - 0.000000000000000000000000001019 119.0
PJD1_k127_4802431_6 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000815 118.0
PJD1_k127_4802431_7 DNA restriction-modification system - - - 0.0000000000000000000000879 111.0
PJD1_k127_4802431_8 Psort location CytoplasmicMembrane, score - - - 0.000000000007994 77.0
PJD1_k127_4802431_9 Putative zinc-finger - - - 0.00005496 50.0
PJD1_k127_4817003_0 3-hydroxyacyl-coa dehydrogenase - - - 6.746e-283 886.0
PJD1_k127_4817003_1 3-isopropylmalate dehydratase activity K01703 - 4.2.1.33,4.2.1.35 3.608e-198 630.0
PJD1_k127_4817003_2 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 574.0
PJD1_k127_4817003_3 Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed K00632 GO:0003674,GO:0003824,GO:0003988,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 566.0
PJD1_k127_4817003_4 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 562.0
PJD1_k127_4817003_5 acyl-CoA dehydrogenase K09456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007777 497.0
PJD1_k127_4817003_6 HMGL-like K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007116 325.0
PJD1_k127_4817003_7 Laminin G domain - - - 0.000000000000000000000000000000000000000000000000000000000000004586 237.0
PJD1_k127_4817003_8 3-isopropylmalate dehydratase activity K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000004883 209.0
PJD1_k127_4915810_0 Type ii secretion system protein e K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 499.0
PJD1_k127_4915810_1 Type ii secretion system K12510 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002237 258.0
PJD1_k127_4915810_2 Type II secretion system (T2SS), protein F K12511 - - 0.000000000000000000000000000000000000000000000000000000000000401 223.0
PJD1_k127_4915810_3 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000000000000000000000000006789 149.0
PJD1_k127_4915810_4 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.00000000000006882 76.0
PJD1_k127_4915810_6 TadE-like protein - - - 0.000005017 57.0
PJD1_k127_4992356_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 8.307e-209 661.0
PJD1_k127_4992356_1 Amino acid kinase family K00926 - 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 351.0
PJD1_k127_4992356_10 Protein of unknown function (DUF971) K03593 - - 0.0000000000000000000000000009612 115.0
PJD1_k127_4992356_11 Belongs to the UPF0109 family K06960 - - 0.0000000000000000000004512 98.0
PJD1_k127_4992356_12 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000006195 100.0
PJD1_k127_4992356_13 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000001025 87.0
PJD1_k127_4992356_14 Protein tyrosine kinase - - - 0.0000002606 56.0
PJD1_k127_4992356_2 Amidinotransferase K01478 - 3.5.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 356.0
PJD1_k127_4992356_3 Belongs to the RNA methyltransferase TrmD family K00554,K01770 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000004303 264.0
PJD1_k127_4992356_4 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000001477 244.0
PJD1_k127_4992356_5 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000652 259.0
PJD1_k127_4992356_6 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000001032 198.0
PJD1_k127_4992356_7 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000000322 166.0
PJD1_k127_4992356_8 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000001279 178.0
PJD1_k127_4992356_9 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000003666 145.0
PJD1_k127_5085714_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008239 370.0
PJD1_k127_5085714_1 PFAM major facilitator superfamily MFS_1 K08162 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005376 346.0
PJD1_k127_5085714_2 FecCD transport family K02013,K02015 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000001965 203.0
PJD1_k127_5085714_3 PFAM ABC transporter related K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000001212 190.0
PJD1_k127_5085714_4 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000006582 176.0
PJD1_k127_5085714_5 Periplasmic binding protein K02016,K06858 - - 0.0000000000000000000000000000000000000007626 159.0
PJD1_k127_5085714_7 VanZ like family - - - 0.00001351 53.0
PJD1_k127_5088036_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 376.0
PJD1_k127_5088036_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 347.0
PJD1_k127_5088036_10 MobA-like NTP transferase domain K03752 - 2.7.7.77 0.00000000001445 74.0
PJD1_k127_5088036_11 PFAM response regulator receiver - - - 0.00000002589 64.0
PJD1_k127_5088036_2 Poly A polymerase head domain K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 314.0
PJD1_k127_5088036_3 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.0000000000000000000000000000000000000000000000000000000008296 208.0
PJD1_k127_5088036_4 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000002675 209.0
PJD1_k127_5088036_5 PFAM Glycosyl transferase family 2 K09931 - - 0.000000000000000000000000000000000000000000000007986 181.0
PJD1_k127_5088036_6 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000002112 176.0
PJD1_k127_5088036_7 TIGRFAM TonB K03832 - - 0.00000000000000000000001139 112.0
PJD1_k127_5088036_8 Tetratricopeptide repeat - - - 0.0000000000001148 81.0
PJD1_k127_5119524_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0 1062.0
PJD1_k127_5119524_1 PAC sensor-containing diguanylate cyclase phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 592.0
PJD1_k127_5119524_2 Peptidase family M50 - - - 0.00000000000000004565 89.0
PJD1_k127_5146826_0 iron-nicotianamine transmembrane transporter activity - - - 1.087e-269 853.0
PJD1_k127_5146826_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.483e-262 837.0
PJD1_k127_5146826_2 Aldo Keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000341 232.0
PJD1_k127_5186455_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 531.0
PJD1_k127_5186455_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 363.0
PJD1_k127_5186455_10 Nudix hydrolase - - - 0.000000000000000000018 102.0
PJD1_k127_5186455_11 Mo-molybdopterin cofactor metabolic process K03636,K03637,K03752,K21142 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.77,2.8.1.12,4.6.1.17 0.00000000000000003386 84.0
PJD1_k127_5186455_12 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000001169 79.0
PJD1_k127_5186455_13 oligosaccharyl transferase activity - - - 0.000000000001197 74.0
PJD1_k127_5186455_15 Polymer-forming cytoskeletal - - - 0.0000000002379 71.0
PJD1_k127_5186455_2 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 295.0
PJD1_k127_5186455_3 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003485 269.0
PJD1_k127_5186455_4 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001215 274.0
PJD1_k127_5186455_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000003355 205.0
PJD1_k127_5186455_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000006606 179.0
PJD1_k127_5186455_7 Histidine triad (HIT) protein K02503 - - 0.00000000000000000000000000000000000000001265 156.0
PJD1_k127_5186455_8 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000005295 142.0
PJD1_k127_5186455_9 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000001709 130.0
PJD1_k127_5190067_0 High confidence in function and specificity - - - 3.039e-248 787.0
PJD1_k127_5190067_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008215 398.0
PJD1_k127_5190067_10 Copper-sensing two-component system response regulator CpxR - - - 0.00000000001815 70.0
PJD1_k127_5190067_2 Alpha/beta hydrolase family K07020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001434 259.0
PJD1_k127_5190067_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000005666 173.0
PJD1_k127_5190067_4 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000007427 146.0
PJD1_k127_5190067_5 Thioredoxin-like - - - 0.00000000000000000000000002563 116.0
PJD1_k127_5190067_6 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000002393 102.0
PJD1_k127_5190067_7 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000431 91.0
PJD1_k127_5190067_8 Transcriptional regulator K07775 - - 0.00000000000000005374 87.0
PJD1_k127_5190067_9 Heme response regulator HssR - - - 0.0000000000000001576 85.0
PJD1_k127_5232627_0 lipoprotein localization to outer membrane K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 479.0
PJD1_k127_5232627_1 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 381.0
PJD1_k127_5232627_2 PDZ DHR GLGF domain protein K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 307.0
PJD1_k127_5232627_3 lipoprotein transporter activity K02003,K05685 - - 0.00000000000000000000000000000000000000000000000000000000003727 212.0
PJD1_k127_5232627_4 PFAM Diacylglycerol kinase, catalytic K07029 - 2.7.1.107 0.00000000000000000000000000000000000000000000007185 179.0
PJD1_k127_5232627_5 nucleotide metabolic process - - - 0.00000000000000002848 87.0
PJD1_k127_5232627_6 ribosome binding - - - 0.0003164 47.0
PJD1_k127_527084_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.582e-224 709.0
PJD1_k127_527084_1 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 569.0
PJD1_k127_527084_2 Protein of unknown function (DUF1361) - - - 0.0000000000000000000000000000000000000001729 158.0
PJD1_k127_527084_3 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000002335 136.0
PJD1_k127_527084_4 sequence-specific DNA binding K07726 - - 0.00000000000000002947 84.0
PJD1_k127_527084_5 Putative zincin peptidase - - - 0.0000000000001097 80.0
PJD1_k127_5301755_0 Hydrolase CocE NonD family - - - 2.266e-270 844.0
PJD1_k127_5301755_1 Phospholipase D Transphosphatidylase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 603.0
PJD1_k127_5301755_10 - - - - 0.0000000000000000001136 98.0
PJD1_k127_5301755_11 Domain of unknown function (DUF378) K09779 - - 0.0000000000000000003362 88.0
PJD1_k127_5301755_12 Tetratricopeptide repeat - - - 0.00000005233 59.0
PJD1_k127_5301755_2 Protein of unknown function (DUF2867) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 544.0
PJD1_k127_5301755_3 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000000000000000000004052 219.0
PJD1_k127_5301755_4 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000463 234.0
PJD1_k127_5301755_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000001827 223.0
PJD1_k127_5301755_6 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000004749 194.0
PJD1_k127_5301755_7 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.000000000000000000000000000000000000000000000000002156 188.0
PJD1_k127_5301755_8 Tryptophan-rich sensory protein K05770 - - 0.00000000000000000000000000000000000000000000000003489 182.0
PJD1_k127_5301755_9 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000008327 130.0
PJD1_k127_5393102_0 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007787 279.0
PJD1_k127_5393102_1 Redoxin K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000004693 173.0
PJD1_k127_5397266_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 5.834e-275 858.0
PJD1_k127_5397266_1 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000539 295.0
PJD1_k127_5397266_2 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001428 261.0
PJD1_k127_5397266_4 transcriptional K07729 - - 0.000000000000000000000003431 104.0
PJD1_k127_5397266_7 - - - - 0.000000000009406 76.0
PJD1_k127_5397266_8 - - - - 0.000009408 54.0
PJD1_k127_5400294_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 379.0
PJD1_k127_5400294_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 323.0
PJD1_k127_5400294_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005928 261.0
PJD1_k127_5400294_3 DNA-templated transcription, initiation - - - 0.00000000000000000000000000000000000000000000000000001132 198.0
PJD1_k127_5400294_4 Protein of unknown function (DUF861) - - - 0.000000000000000000000000000000000000000000013 175.0
PJD1_k127_5400294_5 Multicopper oxidase K00368,K22348 - 1.16.3.3,1.7.2.1 0.0000000000000000000000000000006708 121.0
PJD1_k127_5400294_6 COG2346, Truncated hemoglobins K06886 - - 0.00000000000000000000000001139 113.0
PJD1_k127_5400294_7 Kelch-like protein 17 K10454 GO:0000151,GO:0003674,GO:0003779,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0006996,GO:0007010,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008092,GO:0008150,GO:0009987,GO:0014069,GO:0015629,GO:0016043,GO:0019904,GO:0030029,GO:0030036,GO:0030425,GO:0031208,GO:0031461,GO:0031463,GO:0032279,GO:0032501,GO:0032502,GO:0032838,GO:0032839,GO:0032947,GO:0032991,GO:0036477,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044297,GO:0044424,GO:0044444,GO:0044456,GO:0044463,GO:0044464,GO:0044877,GO:0045202,GO:0048513,GO:0048731,GO:0048856,GO:0051015,GO:0060322,GO:0071840,GO:0097447,GO:0097458,GO:0098794,GO:0098984,GO:0099568,GO:0099572,GO:0120025,GO:0120038,GO:0120111,GO:1902494,GO:1990234 - 0.00000000000000000000009084 111.0
PJD1_k127_5400294_9 nitrogen fixation - - - 0.00000000000141 72.0
PJD1_k127_5479513_0 amine dehydrogenase activity - - - 2.615e-231 749.0
PJD1_k127_5479513_1 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000002231 245.0
PJD1_k127_5479513_2 Protease prsW family - - - 0.000000000000000000000000000000000002125 151.0
PJD1_k127_5479513_3 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.000000000000000000000000000003446 125.0
PJD1_k127_5479513_4 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000003503 125.0
PJD1_k127_5479513_5 Histidine kinase-like ATPase domain - - - 0.000000000000000003585 91.0
PJD1_k127_5479513_6 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749,K06378 - - 0.0000000016 67.0
PJD1_k127_5481660_0 TonB-dependent Receptor Plug Domain K02014 - - 2.611e-318 999.0
PJD1_k127_5481660_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 1.203e-288 904.0
PJD1_k127_5481660_10 chlorophyll binding - - - 0.000000000000000000000000000000000000000000000000000000000000000007249 235.0
PJD1_k127_5481660_11 COG0739 Membrane proteins related to metalloendopeptidases K21472 - - 0.000000000000000000000000000000000000000000000000007509 190.0
PJD1_k127_5481660_12 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.0000000000000000000000000000000001682 136.0
PJD1_k127_5481660_13 AraC-like ligand binding domain - - - 0.000000000000000000000000000000001969 136.0
PJD1_k127_5481660_14 Protein of unknown function (DUF2975) - - - 0.0000000000000000000000000000002114 130.0
PJD1_k127_5481660_15 von Willebrand factor type A domain K07114 - - 0.00000000000000000000000000001272 133.0
PJD1_k127_5481660_16 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K07814 - - 0.0000000000000000000000000005699 118.0
PJD1_k127_5481660_17 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000001856 112.0
PJD1_k127_5481660_18 KaiB K08481 - - 0.00000000000000002605 86.0
PJD1_k127_5481660_19 Phosphodiester glycosidase - - - 0.0000000003197 73.0
PJD1_k127_5481660_2 Diguanylate cyclase - - - 1.906e-208 674.0
PJD1_k127_5481660_3 KaiC K08482 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 593.0
PJD1_k127_5481660_4 Membrane protein, TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 443.0
PJD1_k127_5481660_5 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 365.0
PJD1_k127_5481660_6 LysR substrate binding domain K03717 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 347.0
PJD1_k127_5481660_7 stress-induced mitochondrial fusion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 329.0
PJD1_k127_5481660_8 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 301.0
PJD1_k127_5481660_9 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000532 325.0
PJD1_k127_5497125_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 494.0
PJD1_k127_5497125_1 COG1136 ABC-type antimicrobial peptide transport system ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 308.0
PJD1_k127_5497125_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 300.0
PJD1_k127_5497125_3 cyclic nucleotide-binding K01420,K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000113 284.0
PJD1_k127_5497125_4 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008133 288.0
PJD1_k127_5497125_5 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000001696 240.0
PJD1_k127_5497125_6 HlyD family secretion protein K02005 - - 0.0000000000000000000000000000000000000000000000000008738 199.0
PJD1_k127_5497125_7 Crp Fnr family transcriptional regulator K21563 - - 0.00004741 51.0
PJD1_k127_5513271_0 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006027 302.0
PJD1_k127_5513271_1 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001937 276.0
PJD1_k127_5513271_2 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000001305 259.0
PJD1_k127_5513271_3 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000003353 224.0
PJD1_k127_5513271_4 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000006745 209.0
PJD1_k127_5513271_5 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000007106 208.0
PJD1_k127_5513271_6 outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000000000007126 79.0
PJD1_k127_5524543_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 5.603e-317 985.0
PJD1_k127_5524543_1 SIS domain K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001063 281.0
PJD1_k127_5524543_2 Ornithine cyclodeaminase/mu-crystallin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005647 277.0
PJD1_k127_5524543_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000001112 244.0
PJD1_k127_5524543_4 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000008597 220.0
PJD1_k127_5524543_5 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000003285 181.0
PJD1_k127_5524543_6 Domain of unknown function (DUF4186) - - - 0.0000000000000000000000000000000003851 146.0
PJD1_k127_5569281_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 381.0
PJD1_k127_5569281_1 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 337.0
PJD1_k127_5569281_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000009645 242.0
PJD1_k127_5569281_3 Crossover junction endodeoxyribonuclease RuvC K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000001352 151.0
PJD1_k127_5569281_4 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.00000000000000000000000000000000005787 140.0
PJD1_k127_5631084_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 434.0
PJD1_k127_5631084_1 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007699 381.0
PJD1_k127_5631084_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 363.0
PJD1_k127_5631084_3 PFAM ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 317.0
PJD1_k127_5653003_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001213 276.0
PJD1_k127_5653003_1 Belongs to the PdxA family K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000000000002587 257.0
PJD1_k127_5653003_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000004377 217.0
PJD1_k127_5679030_0 glucan 1,4-alpha-glucosidase activity - - - 3.387e-206 661.0
PJD1_k127_5679030_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 362.0
PJD1_k127_5679030_10 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000004607 91.0
PJD1_k127_5679030_11 Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.00000000000000001964 87.0
PJD1_k127_5679030_12 - - - - 0.00000000000007555 86.0
PJD1_k127_5679030_14 Belongs to the P-Pant transferase superfamily K06133 - - 0.0000009867 61.0
PJD1_k127_5679030_2 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 335.0
PJD1_k127_5679030_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000002699 250.0
PJD1_k127_5679030_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000004919 226.0
PJD1_k127_5679030_5 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000002844 219.0
PJD1_k127_5679030_6 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000003994 195.0
PJD1_k127_5679030_7 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000001287 154.0
PJD1_k127_5679030_8 ATP-grasp domain K01921 - 6.3.2.4 0.0000000000000000000000000000000000001582 159.0
PJD1_k127_5679030_9 Cytochrome C assembly protein - - - 0.0000000000000000000005552 106.0
PJD1_k127_5690360_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 501.0
PJD1_k127_5690360_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006355 392.0
PJD1_k127_5690360_10 PTS system fructose IIA component K02793,K02794,K02821 - 2.7.1.191,2.7.1.194 0.000000000000000000000000000003326 125.0
PJD1_k127_5690360_11 regulation of translation K05808,K05809 GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006417,GO:0006446,GO:0006448,GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0045947,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.00000000000000000000004189 106.0
PJD1_k127_5690360_12 Phosphocarrier protein HPr K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000002215 101.0
PJD1_k127_5690360_13 Sigma 54 modulation protein K05808 - - 0.00000002482 61.0
PJD1_k127_5690360_2 Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 299.0
PJD1_k127_5690360_3 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007091 302.0
PJD1_k127_5690360_4 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005677 269.0
PJD1_k127_5690360_5 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000000000000000000000000000000009203 232.0
PJD1_k127_5690360_6 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000003569 187.0
PJD1_k127_5690360_7 chromosome segregation K03497 - - 0.0000000000000000000000000000000000000000000000002541 195.0
PJD1_k127_5690360_8 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000009246 173.0
PJD1_k127_5690360_9 Mannose-6-phosphate isomerase - - - 0.0000000000000000000000000000000000000003408 152.0
PJD1_k127_5735111_0 TonB-dependent receptor K02014 - - 1.882e-203 670.0
PJD1_k127_5735111_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 561.0
PJD1_k127_5735111_2 (ABC) transporter K15738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 524.0
PJD1_k127_5735111_3 Glycosyl hydrolase family 47 K01230,K10085 - 3.2.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 491.0
PJD1_k127_5735111_4 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 367.0
PJD1_k127_5735111_5 23S rRNA-intervening sequence protein - - - 0.00000000000000000001738 97.0
PJD1_k127_5864331_0 Pyruvate ferredoxin/flavodoxin oxidoreductase K00187 - 1.2.7.7 1.278e-213 694.0
PJD1_k127_5864331_1 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 591.0
PJD1_k127_5864331_2 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 385.0
PJD1_k127_5864331_3 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 351.0
PJD1_k127_5864331_4 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007304 334.0
PJD1_k127_5864331_5 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000004283 171.0
PJD1_k127_5864331_6 DnaJ molecular chaperone homology domain - - - 0.000000000004215 73.0
PJD1_k127_5880216_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.644e-194 639.0
PJD1_k127_5880216_1 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006954 525.0
PJD1_k127_5880216_2 Ferritin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000006552 214.0
PJD1_k127_5880216_3 Alternative locus ID - - - 0.00000000000000000000000000000000000000000000000000000168 202.0
PJD1_k127_5880216_4 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000002241 169.0
PJD1_k127_5880216_5 EamA-like transporter family - - - 0.00000000000000000000000000000000006422 145.0
PJD1_k127_5880216_6 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000003087 116.0
PJD1_k127_5880216_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000001381 69.0
PJD1_k127_5880216_8 - - - - 0.000000001098 71.0
PJD1_k127_5880216_9 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.000000004019 64.0
PJD1_k127_5882185_0 PTS system, N-acetylglucosamine-specific K02803,K02804 - 2.7.1.193 4.303e-197 632.0
PJD1_k127_5882185_1 PTS system, glucose subfamily, IIA K11189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000444 502.0
PJD1_k127_5882185_2 Belongs to the protein kinase superfamily. Ser Thr protein kinase family K04730,K04733,K13420 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 368.0
PJD1_k127_5882185_3 RES - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 299.0
PJD1_k127_5882185_4 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000000000000009583 237.0
PJD1_k127_5882185_5 Protein of unknown function (DUF2384) - - - 0.00000000000000000000000000000000000000000000000000000009055 207.0
PJD1_k127_5882185_6 YCII-related domain - - - 0.0000000000000000000000000000000000000000001952 164.0
PJD1_k127_5882185_7 - - - - 0.00000000009055 70.0
PJD1_k127_58928_0 Molydopterin dinucleotide binding domain K08352 - 1.8.5.5 5e-324 1007.0
PJD1_k127_58928_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 492.0
PJD1_k127_58928_10 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000001007 202.0
PJD1_k127_58928_11 GYD domain - - - 0.0000000000000000000000000000000000000000000000000002579 186.0
PJD1_k127_58928_12 Protein of unknown function (DUF3037) - - - 0.0000000000000000000000000000000000000000000002173 171.0
PJD1_k127_58928_13 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000002414 153.0
PJD1_k127_58928_14 Lanthionine synthetase C family protein - - - 0.0000000000000000000000001275 118.0
PJD1_k127_58928_15 Protein of unknown function (DUF2892) - - - 0.0000000000000000000344 92.0
PJD1_k127_58928_16 Putative zinc-finger - - - 0.000001973 53.0
PJD1_k127_58928_17 dienelactone hydrolase - - - 0.000042 52.0
PJD1_k127_58928_18 Protein conserved in bacteria - - - 0.0008753 49.0
PJD1_k127_58928_2 long-chain fatty acid transporting porin activity K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009208 383.0
PJD1_k127_58928_3 Serine threonine protein kinase involved in cell cycle control - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007708 335.0
PJD1_k127_58928_4 ferredoxin-NADP+ reductase activity K00384,K21567 - 1.18.1.2,1.19.1.1,1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 322.0
PJD1_k127_58928_5 PFAM Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005193 276.0
PJD1_k127_58928_6 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002526 276.0
PJD1_k127_58928_7 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009556 256.0
PJD1_k127_58928_8 4 iron, 4 sulfur cluster binding K04014,K08353,K08358,K16293 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016661,GO:0016662,GO:0030288,GO:0030313,GO:0031975,GO:0042279,GO:0042597,GO:0044464,GO:0055114,GO:0098809 - 0.00000000000000000000000000000000000000000000000000000000000000000001089 240.0
PJD1_k127_58928_9 Pfam:Methyltransf_26 K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000002315 242.0
PJD1_k127_5902617_0 Belongs to the ABC transporter superfamily K05816,K10112 - 3.6.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009063 451.0
PJD1_k127_5902617_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 383.0
PJD1_k127_5902617_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000001425 226.0
PJD1_k127_5902617_3 Divergent polysaccharide deacetylase K09798 - - 0.000000000000000000000000000000000000000000002065 175.0
PJD1_k127_5902617_4 - - - - 0.000000000000006255 80.0
PJD1_k127_5902617_5 - - - - 0.00000000000017 81.0
PJD1_k127_5937326_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 561.0
PJD1_k127_5937326_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 483.0
PJD1_k127_5937326_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008767 287.0
PJD1_k127_5937326_3 - - - - 0.0000000000000000000000000000000000000000006277 165.0
PJD1_k127_5937326_4 Histidine kinase - - - 0.00000000000000000000000000000000000006489 161.0
PJD1_k127_5937326_5 PFAM Uncharacterised protein family (UPF0227) K07000 - - 0.000000000008519 74.0
PJD1_k127_5979812_0 Belongs to the aldehyde dehydrogenase family K00128,K00138,K10217 - 1.2.1.3,1.2.1.32,1.2.1.85 1.149e-197 631.0
PJD1_k127_5979812_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 511.0
PJD1_k127_5979812_10 O-Antigen ligase K18814 - - 0.000000000000083 84.0
PJD1_k127_5979812_11 Glycosyltransferase Family 4 - - - 0.0000000000002542 81.0
PJD1_k127_5979812_12 Trm112p-like protein K09791 - - 0.000000000039 66.0
PJD1_k127_5979812_13 deoxyhypusine monooxygenase activity - - - 0.00000221 59.0
PJD1_k127_5979812_14 - - - - 0.000004353 59.0
PJD1_k127_5979812_2 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15059 - 1.13.11.74,1.13.11.76 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006898 398.0
PJD1_k127_5979812_3 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 370.0
PJD1_k127_5979812_4 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.00000000000000000000000000000000000000000000000000000000000126 217.0
PJD1_k127_5979812_5 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15058 - - 0.000000000000000000000000000000000000000000000001157 191.0
PJD1_k127_5979812_6 long-chain fatty acid transporting porin activity K06076 - - 0.0000000000000000000000000000000000001811 158.0
PJD1_k127_5979812_7 translation initiation inhibitor, yjgF family K15067 - 3.5.99.5 0.0000000000000000000000000000000000121 152.0
PJD1_k127_5979812_8 L-asparaginase II - - - 0.00000000000000000000000000009017 128.0
PJD1_k127_5979812_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000009824 124.0
PJD1_k127_6037227_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 409.0
PJD1_k127_6037227_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007619 333.0
PJD1_k127_6037227_2 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000002628 237.0
PJD1_k127_6037227_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000002801 174.0
PJD1_k127_6037227_4 PFAM DNA repair protein RadC K03630 - - 0.00000000000000000000000000000000000000000002223 178.0
PJD1_k127_6037227_5 Domain of unknown function (DUF4214) K18827 - 2.1.1.294,2.7.1.181 0.0000000000000000000000000000000000006314 154.0
PJD1_k127_6037227_6 peptidyl-prolyl isomerase K03769 - 5.2.1.8 0.0000000000000000000000009831 117.0
PJD1_k127_6037227_7 Rhomboid family K19225 - 3.4.21.105 0.000000000000000000000006575 114.0
PJD1_k127_6037227_8 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.00000000000001001 86.0
PJD1_k127_6107663_0 Belongs to the ClpA ClpB family K03696 - - 6.451e-286 899.0
PJD1_k127_6107663_1 Nickel-dependent hydrogenase K00436 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 471.0
PJD1_k127_6107663_2 Aldo/keto reductase family K16950 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 371.0
PJD1_k127_6107663_3 coenzyme F420 hydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 329.0
PJD1_k127_6107663_4 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001416 272.0
PJD1_k127_6107663_5 ABC transporter K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000495 255.0
PJD1_k127_6107663_6 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000002257 129.0
PJD1_k127_6107663_7 Hydrogenase maturation protease - - - 0.000000004479 66.0
PJD1_k127_6107663_8 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K21562 - - 0.0009897 48.0
PJD1_k127_6148339_0 FeS assembly protein SufB K09014 - - 4.063e-263 815.0
PJD1_k127_6148339_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006016 577.0
PJD1_k127_6148339_2 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007035 364.0
PJD1_k127_6148339_3 Uncharacterized protein family (UPF0051) K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 357.0
PJD1_k127_6148339_4 FeS assembly SUF system protein SufT - - - 0.00000000000000000000000000000000000000000000000000000000003889 211.0
PJD1_k127_6148339_5 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000000000000000005038 193.0
PJD1_k127_6148339_6 Transcriptional regulator - - - 0.00000000000000000000001346 109.0
PJD1_k127_6148339_7 Protein of unknown function (DUF2752) - - - 0.00000000000000005934 85.0
PJD1_k127_6175122_0 Xanthine dehydrogenase K13482 - 1.17.1.4 5.943e-249 791.0
PJD1_k127_6175122_1 Belongs to the allantoicase family K01477 - 3.5.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 580.0
PJD1_k127_6175122_10 Domain of Unknown Function (DUF1206) - - - 0.00000000000000000000000000000000000000000000000000000000000000001957 233.0
PJD1_k127_6175122_11 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K15396 - 2.1.1.200 0.0000000000000000000000000000009115 130.0
PJD1_k127_6175122_12 Transthyretin K07127 - 3.5.2.17 0.000000000000000000000000000001074 125.0
PJD1_k127_6175122_13 Acetyltransferase (GNAT) domain - - - 0.00000000000000000004722 101.0
PJD1_k127_6175122_14 protein with SCP PR1 domains - - - 0.0003277 52.0
PJD1_k127_6175122_2 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 568.0
PJD1_k127_6175122_3 Belongs to the HpcH HpaI aldolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 528.0
PJD1_k127_6175122_4 Amidohydrolase family K01466 - 3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 495.0
PJD1_k127_6175122_5 histidine kinase dimerisation and phosphoacceptor region K03406,K07673,K07675 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 457.0
PJD1_k127_6175122_6 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004419 271.0
PJD1_k127_6175122_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007271 269.0
PJD1_k127_6175122_8 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008899 257.0
PJD1_k127_6175122_9 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000486 243.0
PJD1_k127_6206916_0 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005814 591.0
PJD1_k127_6206916_1 PFAM permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 419.0
PJD1_k127_6206916_10 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000007696 82.0
PJD1_k127_6206916_11 redox-active disulfide protein 2 - - - 0.000000000000004813 81.0
PJD1_k127_6206916_12 TIGRFAM VWFA-related Acidobacterial domain - - - 0.00000000000001452 89.0
PJD1_k127_6206916_13 - - - - 0.0008226 53.0
PJD1_k127_6206916_2 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 417.0
PJD1_k127_6206916_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 377.0
PJD1_k127_6206916_4 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002931 353.0
PJD1_k127_6206916_5 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 349.0
PJD1_k127_6206916_6 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 352.0
PJD1_k127_6206916_7 OsmC-like protein - - - 0.00000000000000000000000000000002472 133.0
PJD1_k127_6206916_8 cellular response to DNA damage stimulus K07340 - - 0.00000000000000000000009946 113.0
PJD1_k127_6206916_9 signal transduction histidine kinase K02668,K07709 - 2.7.13.3 0.0000000000000000002742 100.0
PJD1_k127_621825_0 Dehydrogenase K00248,K09478 - 1.3.8.1,1.3.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005161 554.0
PJD1_k127_621825_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 544.0
PJD1_k127_621825_2 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 366.0
PJD1_k127_621825_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006181 326.0
PJD1_k127_621825_4 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004045 300.0
PJD1_k127_621825_5 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000001798 156.0
PJD1_k127_621825_6 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000001678 96.0
PJD1_k127_62355_0 Phospholipase D Transphosphatidylase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 438.0
PJD1_k127_62355_1 ribonuclease BN K07058 - - 0.000000000000000000000002271 120.0
PJD1_k127_62355_2 Domain of unknown function (DUF4112) - - - 0.000000000000000000002356 107.0
PJD1_k127_6309825_0 Protein kinase domain K12132 - 2.7.11.1 4.799e-237 760.0
PJD1_k127_6309825_1 Beta-galactosidase trimerisation domain K12308 - 3.2.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005059 417.0
PJD1_k127_6309825_10 - - - - 0.000002665 57.0
PJD1_k127_6309825_2 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 379.0
PJD1_k127_6309825_3 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 363.0
PJD1_k127_6309825_4 Met-10+ like-protein - - - 0.000000000000000000000000000000000000000000003584 171.0
PJD1_k127_6309825_5 mRNA catabolic process - - - 0.0000000000000000000000000000000000000001709 156.0
PJD1_k127_6309825_6 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000002408 155.0
PJD1_k127_6309825_7 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.00000000000000000000000000008908 119.0
PJD1_k127_6309825_8 thiolester hydrolase activity K06889 - - 0.0000000000000000000000009269 115.0
PJD1_k127_6309825_9 helix_turn_helix, Lux Regulon - - - 0.000000000000005409 81.0
PJD1_k127_6312244_0 PFAM glycoside hydrolase 15-related - - - 2.029e-238 751.0
PJD1_k127_6312244_1 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 339.0
PJD1_k127_6312244_2 Pirin K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008648 298.0
PJD1_k127_6312244_3 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003534 285.0
PJD1_k127_6312244_4 YceI-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000006658 229.0
PJD1_k127_6312244_5 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000003432 144.0
PJD1_k127_6312244_6 YbaK prolyl-tRNA synthetase associated region - - - 0.000000000000000000000000000000000008137 142.0
PJD1_k127_6312244_7 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000003468 141.0
PJD1_k127_6312244_8 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000001974 139.0
PJD1_k127_6312244_9 Sigma-70, region 4 K03088 - - 0.000000000000000000000000001424 119.0
PJD1_k127_6318974_0 PFAM Type II secretion system protein E K02652 - - 1.523e-224 708.0
PJD1_k127_6318974_1 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 300.0
PJD1_k127_6318974_2 PFAM Fimbrial assembly family protein K02663 - - 0.000000003597 65.0
PJD1_k127_6318974_3 metallopeptidase activity K20276 - - 0.0000001023 62.0
PJD1_k127_6318974_4 Pilus assembly protein - - - 0.0003906 52.0
PJD1_k127_6343618_0 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009557 439.0
PJD1_k127_6343618_1 response to abiotic stimulus K03086,K06867 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005259 409.0
PJD1_k127_6343618_2 Methyltransferase domain K15942 - 2.1.1.288 0.0000000000000000000000000000000000000000002372 170.0
PJD1_k127_6343618_3 LysR substrate binding domain - - - 0.000000000000000000000000000000000000009365 153.0
PJD1_k127_6343618_4 SIS domain - - - 0.000000000000000000000004429 102.0
PJD1_k127_6376940_0 ThiF family K03148,K21029,K21147 - 2.7.7.73,2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 452.0
PJD1_k127_6376940_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 407.0
PJD1_k127_6376940_2 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000256 189.0
PJD1_k127_6376940_3 Yqey-like protein K09117 - - 0.000000000000000000000000007873 116.0
PJD1_k127_6376940_4 Cysteine-rich secretory protein family - - - 0.0000000000000000000001505 104.0
PJD1_k127_6376940_5 O-linked N-acetylglucosamine transferase SPINDLY family - - - 0.0000000000000000003303 102.0
PJD1_k127_6376940_6 Acetyl propionyl-CoA carboxylase alpha subunit K01968 - 6.4.1.4 0.0000000000000003578 88.0
PJD1_k127_6376940_7 Integral membrane sensor signal transduction histidine kinase - - - 0.000000002472 69.0
PJD1_k127_6403152_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1237.0
PJD1_k127_6403152_1 molybdopterin cofactor binding - - - 6.872e-231 737.0
PJD1_k127_6403152_10 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17105 - 2.5.1.42 0.000000000000000001367 97.0
PJD1_k127_6403152_12 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K20276 - - 0.000000004492 69.0
PJD1_k127_6403152_2 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 550.0
PJD1_k127_6403152_3 diguanylate cyclase (GGDEF) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 494.0
PJD1_k127_6403152_4 PFAM WD40 domain protein beta Propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008348 447.0
PJD1_k127_6403152_5 OST-HTH/LOTUS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 359.0
PJD1_k127_6403152_6 hydrolase activity, acting on ester bonds K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008588 273.0
PJD1_k127_6403152_7 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000001355 241.0
PJD1_k127_6403152_8 Flavin-binding monooxygenase-like K07222 - - 0.0000000000000000000000000000000000000000000000000000000000553 219.0
PJD1_k127_6403152_9 Predicted membrane protein (DUF2157) - - - 0.00000000000000000000000000000002468 138.0
PJD1_k127_6407714_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 495.0
PJD1_k127_6407714_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 395.0
PJD1_k127_6407714_10 Transglycosylase SLT domain - - - 0.000000000000000000000000000000006303 139.0
PJD1_k127_6407714_11 Exopeptidase that catalyzes the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin K13282 - 3.4.15.6 0.000000244 61.0
PJD1_k127_6407714_12 COG0457 FOG TPR repeat - - - 0.00002912 56.0
PJD1_k127_6407714_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 356.0
PJD1_k127_6407714_3 PHP domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 318.0
PJD1_k127_6407714_4 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000002228 254.0
PJD1_k127_6407714_5 Beta-lactamase K01256,K17836 - 3.4.11.2,3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000006305 244.0
PJD1_k127_6407714_6 Competence protein ComEC K02238 - - 0.000000000000000000000000000000000000000000000000004287 206.0
PJD1_k127_6407714_7 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000003582 194.0
PJD1_k127_6407714_8 - - - - 0.0000000000000000000000000000000000000000000000002252 185.0
PJD1_k127_6407714_9 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000003035 150.0
PJD1_k127_6411287_0 PFAM Rieske 2Fe-2S domain protein K00479,K00499 - 1.14.15.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 391.0
PJD1_k127_6411287_1 amino acid K03294,K20265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007058 382.0
PJD1_k127_6411287_2 Branched-chain amino acid transport system / permease component K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 335.0
PJD1_k127_6411287_3 Psort location CytoplasmicMembrane, score K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009395 303.0
PJD1_k127_6411287_4 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 293.0
PJD1_k127_6411287_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000001984 182.0
PJD1_k127_6411287_6 - - - - 0.0000000000000000000000000000000000000000000002587 178.0
PJD1_k127_6417729_0 Amidohydrolase family K01464 - 3.5.2.2 3.94e-209 659.0
PJD1_k127_6417729_1 permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 5.807e-194 616.0
PJD1_k127_6417729_2 COGs COG0160 4-aminobutyrate aminotransferase and related aminotransferase K00823,K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 536.0
PJD1_k127_6417729_3 Pfam Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 476.0
PJD1_k127_6417729_4 Dihydroorotate dehydrogenase K17723 GO:0003674,GO:0003824,GO:0003954,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 387.0
PJD1_k127_6417729_5 pteridine-dependent deoxygenase K18240 - 4.1.3.40,4.1.3.45 0.000000000000000000000000000000000000000000000000000000002926 211.0
PJD1_k127_6417729_6 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000004187 177.0
PJD1_k127_6439432_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 350.0
PJD1_k127_6439432_1 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005727 339.0
PJD1_k127_6439432_10 Transcriptional regulatory protein, C terminal - - - 0.0000000002015 69.0
PJD1_k127_6439432_2 Short-chain dehydrogenase reductase SDR K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000003094 256.0
PJD1_k127_6439432_3 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000001997 208.0
PJD1_k127_6439432_4 Helix-turn-helix domain K07506 - - 0.00000000000000000000008 107.0
PJD1_k127_6439432_5 Ribosomal L32p protein family K02911 - - 0.0000000000000000000001779 98.0
PJD1_k127_6439432_6 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000001041 96.0
PJD1_k127_6439432_7 Beta-lactamase - - - 0.0000000000000001707 84.0
PJD1_k127_6439432_8 response regulator K02483 GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010106,GO:0019725,GO:0030003,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042592,GO:0042594,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071496,GO:0098771 - 0.000000000000008309 80.0
PJD1_k127_6439432_9 (FHA) domain - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0016020,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051301,GO:0051704,GO:0071944 - 0.000000000007065 74.0
PJD1_k127_6467195_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 379.0
PJD1_k127_6467195_1 PFAM beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 314.0
PJD1_k127_6467195_2 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005961 299.0
PJD1_k127_6467195_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.000000000000000000000000000000000000000000000001925 202.0
PJD1_k127_6467195_4 protein secretion K09800 - - 0.000000000000000000000000000000000000000000002425 192.0
PJD1_k127_6467195_5 Diguanylate cyclase - - - 0.000000000000000000000000000000001077 145.0
PJD1_k127_6467195_6 PFAM MOFRL domain protein K11529 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016491,GO:0016661,GO:0016662,GO:0016740,GO:0016772,GO:0043798,GO:0044237,GO:0055114 2.7.1.165 0.00000000000000000000000000000003803 141.0
PJD1_k127_6467195_7 Protein of unknown function (DUF962) - - - 0.00000000000000000000000000004642 119.0
PJD1_k127_6467195_8 DNA-binding transcription factor activity - - - 0.000000005248 63.0
PJD1_k127_6467195_9 Peptidase S9 prolyl oligopeptidase active site - - - 0.0004815 49.0
PJD1_k127_6504283_0 Beta-eliminating lyase K01668 - 4.1.99.2 1.938e-244 766.0
PJD1_k127_6504283_1 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 606.0
PJD1_k127_6504283_2 Peptidase U62 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 428.0
PJD1_k127_6504283_3 amino acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 324.0
PJD1_k127_6504283_4 Spore maturation protein K06373 - - 0.00000000000000000000000000000000000000000000000000000000006046 211.0
PJD1_k127_6504283_5 Nucleoside recognition K06374 - - 0.00000000000000000000000000000000000000000000000000000001963 201.0
PJD1_k127_6504283_6 PKD domain - - - 0.0000000000000000000216 107.0
PJD1_k127_6504283_7 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000002097 74.0
PJD1_k127_6572585_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 620.0
PJD1_k127_6572585_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K01147,K12573 - 3.1.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005993 570.0
PJD1_k127_6572585_10 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000001554 157.0
PJD1_k127_6572585_11 Allophanate hydrolase subunit 2 - - - 0.0000000000000000000000000000000000000131 161.0
PJD1_k127_6572585_12 Acetyltransferase K06976 - - 0.0000000000000000000000000000001383 134.0
PJD1_k127_6572585_13 phosphoglycerate mutase K02226,K22305 - 3.1.3.3,3.1.3.73 0.00000000000000000000000000005001 124.0
PJD1_k127_6572585_14 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000005244 106.0
PJD1_k127_6572585_15 cold-shock protein K03704 - - 0.000000000000000000001171 97.0
PJD1_k127_6572585_16 TIGRFAM VWFA-related Acidobacterial domain - - - 0.000000000000000000004628 105.0
PJD1_k127_6572585_17 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.00000000000000000575 96.0
PJD1_k127_6572585_18 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000001132 90.0
PJD1_k127_6572585_19 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000005166 48.0
PJD1_k127_6572585_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000985 522.0
PJD1_k127_6572585_20 - - - - 0.00001895 57.0
PJD1_k127_6572585_21 Domain of unknown function (DUF4177) - - - 0.00002294 51.0
PJD1_k127_6572585_3 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 369.0
PJD1_k127_6572585_4 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 326.0
PJD1_k127_6572585_5 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002495 274.0
PJD1_k127_6572585_6 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion K02564 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.5.99.6 0.00000000000000000000000000000000000000000000000000000000000000000001284 241.0
PJD1_k127_6572585_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000458 219.0
PJD1_k127_6572585_8 Deoxynucleoside kinase K15518 - 2.7.1.113 0.000000000000000000000000000000000000000000000000000000000006989 212.0
PJD1_k127_6572585_9 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000001802 176.0
PJD1_k127_6686701_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.602e-290 907.0
PJD1_k127_6686701_1 Chemotaxis protein histidine kinase and related kinases K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 434.0
PJD1_k127_6686701_10 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000003853 170.0
PJD1_k127_6686701_11 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000004562 161.0
PJD1_k127_6686701_12 CheD chemotactic sensory transduction K03411 - 3.5.1.44 0.00000000000000000000000000000000002571 142.0
PJD1_k127_6686701_13 Gaf domain K07814 - - 0.000000000000000000000000000000001281 139.0
PJD1_k127_6686701_14 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000004421 134.0
PJD1_k127_6686701_15 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000004158 100.0
PJD1_k127_6686701_16 Response regulator receiver domain - - - 0.00000000000234 73.0
PJD1_k127_6686701_17 - - - - 0.0000000002317 72.0
PJD1_k127_6686701_18 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.0001627 53.0
PJD1_k127_6686701_2 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 380.0
PJD1_k127_6686701_3 histidine kinase HAMP region domain protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 349.0
PJD1_k127_6686701_4 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 323.0
PJD1_k127_6686701_5 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 296.0
PJD1_k127_6686701_6 PAS domain containing protein K02030 - - 0.0000000000000000000000000000000000000000000000000000000000002147 226.0
PJD1_k127_6686701_7 reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000001813 217.0
PJD1_k127_6686701_8 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000002832 199.0
PJD1_k127_6686701_9 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000000000001779 175.0
PJD1_k127_6699208_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 4.401e-245 779.0
PJD1_k127_6699208_1 Belongs to the HypD family K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 501.0
PJD1_k127_6699208_2 hydrogenase expression formation protein HypE K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008091 439.0
PJD1_k127_6699208_3 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000006818 135.0
PJD1_k127_6699208_4 carbon dioxide binding K04653,K04654 - - 0.00000000000000000000000009273 123.0
PJD1_k127_6699208_5 Regulatory protein - - - 0.00000000000000000000001805 104.0
PJD1_k127_6699208_6 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000005016 84.0
PJD1_k127_673133_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004065 463.0
PJD1_k127_673133_1 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005163 280.0
PJD1_k127_673133_2 esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001129 260.0
PJD1_k127_673133_3 PFAM flavin reductase domain protein, FMN-binding - - - 0.00000000000000000000000000000000000000000000001033 178.0
PJD1_k127_673133_4 SMART protein phosphatase 2C domain protein - - - 0.00000000000000000000000000008288 129.0
PJD1_k127_6769678_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 6.777e-291 917.0
PJD1_k127_6769678_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 422.0
PJD1_k127_6769678_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 307.0
PJD1_k127_6769678_3 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000001084 181.0
PJD1_k127_6769678_4 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000216 166.0
PJD1_k127_6769678_5 BioY family K02014,K03523 - - 0.00000000000000000000000000000003184 140.0
PJD1_k127_6769678_6 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000001098 108.0
PJD1_k127_6803906_0 FAD binding domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 4.418e-223 703.0
PJD1_k127_6803906_1 Pyruvate flavodoxin ferredoxin K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 519.0
PJD1_k127_6803906_2 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 366.0
PJD1_k127_6803906_3 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007311 379.0
PJD1_k127_6803906_4 NAD(P)-binding Rossmann-like domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000001083 264.0
PJD1_k127_6803906_5 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000006391 243.0
PJD1_k127_6803906_6 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000006078 169.0
PJD1_k127_6803906_7 4Fe-4S dicluster domain K00176 - 1.2.7.3 0.00000000000000000000000000000003388 128.0
PJD1_k127_6803906_8 helix_turn_helix multiple antibiotic resistance protein - - - 0.00003299 53.0
PJD1_k127_6877884_0 PFAM aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K00256 - 1.3.99.16 4.387e-234 747.0
PJD1_k127_6877884_1 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007598 555.0
PJD1_k127_6877884_2 Short chain fatty acid transporter K02106 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 475.0
PJD1_k127_6877884_3 cystathionine gamma-synthase activity K01758,K01760,K01761 - 4.4.1.1,4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 374.0
PJD1_k127_6877884_4 2Fe-2S -binding domain protein K18029 - 1.17.2.1 0.00000000000000000000000000000000000000000000000000000000000000009914 224.0
PJD1_k127_6877884_5 competence protein COMEC K02238 - - 0.00000000000000000000000000000000000000000000000000001987 203.0
PJD1_k127_6877884_6 - - - - 0.0000000000000000000000000000000000000000000117 168.0
PJD1_k127_6877884_7 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07775 - - 0.00000000000000000001529 96.0
PJD1_k127_6877884_8 PFAM Transglycosylase associated protein - - - 0.0000002969 55.0
PJD1_k127_6886720_0 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 333.0
PJD1_k127_6886720_1 PFAM Aminotransferase, class I K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000001878 226.0
PJD1_k127_6886720_2 Serine threonine protein kinase K08884,K12132 GO:0000270,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009605,GO:0009607,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0010698,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0022603,GO:0022604,GO:0030145,GO:0030203,GO:0030234,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032091,GO:0034645,GO:0036211,GO:0040007,GO:0042304,GO:0042546,GO:0042802,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043388,GO:0043393,GO:0043412,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046872,GO:0046890,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051055,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0075136,GO:0080090,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000142 227.0
PJD1_k127_6886720_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714,K21062 - 3.5.4.22,4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000186 213.0
PJD1_k127_6886720_4 - - - - 0.00000001411 68.0
PJD1_k127_6900259_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1437.0
PJD1_k127_6900259_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K07799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 394.0
PJD1_k127_6900259_2 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006351 389.0
PJD1_k127_6900259_3 ATP ADP translocase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008445 337.0
PJD1_k127_6900259_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 312.0
PJD1_k127_6900259_5 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 295.0
PJD1_k127_6900259_6 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000005049 183.0
PJD1_k127_7019532_0 Protein of unknown function, DUF255 K06888 - - 4.64e-222 706.0
PJD1_k127_7019532_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 3.045e-220 699.0
PJD1_k127_7019532_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 423.0
PJD1_k127_7019532_3 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008932 331.0
PJD1_k127_7019532_4 Protein export membrane protein K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000001476 262.0
PJD1_k127_7019532_5 Exopolysaccharide synthesis, ExoD - - - 0.000000000000000000000000000000000000000000000000000000005471 205.0
PJD1_k127_7019532_6 Fibronectin type III domain protein - - - 0.00000000000000000000003278 112.0
PJD1_k127_7143831_0 glutamate-cysteine ligase activity K06048 GO:0003674,GO:0003824,GO:0016874,GO:0016879 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 478.0
PJD1_k127_7143831_1 Nucleotidyl transferase K04042,K11528 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008023 467.0
PJD1_k127_7143831_10 GMP synthase-glutamine amidotransferase - - - 0.00000003521 64.0
PJD1_k127_7143831_11 Aspartyl protease - - - 0.00001078 58.0
PJD1_k127_7143831_12 - - - - 0.0001792 48.0
PJD1_k127_7143831_2 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 354.0
PJD1_k127_7143831_3 Required for morphogenesis under gluconeogenic growth conditions - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004274 314.0
PJD1_k127_7143831_4 Sigma-54 interaction domain K10912 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001422 286.0
PJD1_k127_7143831_5 PFAM Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000002252 251.0
PJD1_k127_7143831_6 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000009697 186.0
PJD1_k127_7143831_7 esterase - - - 0.000000000000000000000000000000000000005975 151.0
PJD1_k127_7143831_8 Uncharacterized protein family UPF0029 - - - 0.0000000000000000000000000000003284 131.0
PJD1_k127_7143831_9 Putative adhesin - - - 0.000000000000003742 86.0
PJD1_k127_7144369_0 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 484.0
PJD1_k127_7144369_1 nitrogen compound transport K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 325.0
PJD1_k127_7144369_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 299.0
PJD1_k127_7144369_3 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000005286 203.0
PJD1_k127_7144369_4 - K07018 - - 0.0000000000000000000000000000000000000000002452 166.0
PJD1_k127_7144369_5 PFAM periplasmic binding protein - - - 0.0000000000000000000000000000000000000000008846 167.0
PJD1_k127_7144369_6 Stage II sporulation K07315 - 3.1.3.3 0.0000000000000000000005407 100.0
PJD1_k127_7144369_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00363,K05710 - 1.7.1.15 0.0000000000000000000006793 104.0
PJD1_k127_7144369_8 PAP2 superfamily - - - 0.000000000002646 78.0
PJD1_k127_7165127_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 5.491e-262 816.0
PJD1_k127_7165127_1 4Fe-4S dicluster domain K00184 - - 2.965e-229 729.0
PJD1_k127_7165127_10 - - - - 0.00000001608 63.0
PJD1_k127_7165127_2 Polysulphide reductase, NrfD K00185 - - 7.779e-206 652.0
PJD1_k127_7165127_3 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004313 390.0
PJD1_k127_7165127_4 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 321.0
PJD1_k127_7165127_5 signal sequence binding K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003183 274.0
PJD1_k127_7165127_6 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000001891 231.0
PJD1_k127_7165127_7 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000000000000000000000000000000000009045 226.0
PJD1_k127_7165127_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000001737 223.0
PJD1_k127_7165127_9 TIGRFAM Caa(3)-type oxidase, subunit IV K02277 - 1.9.3.1 0.00000000000000002792 85.0
PJD1_k127_7184055_0 FRG - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 319.0
PJD1_k127_7184055_1 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 301.0
PJD1_k127_7184055_2 ZIP Zinc transporter K07238 - - 0.0000000000000000000000000000000000000000000003373 175.0
PJD1_k127_7184055_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000006651 96.0
PJD1_k127_7184055_4 diguanylate cyclase - - - 0.000000000000000002469 95.0
PJD1_k127_7184055_5 nickel cation binding K04651 - - 0.00000000001151 68.0
PJD1_k127_7205859_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 1.023e-316 989.0
PJD1_k127_7205859_1 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 - 1.13.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 614.0
PJD1_k127_7205859_2 Fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004293 559.0
PJD1_k127_7205859_3 helicase superfamily c-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008939 527.0
PJD1_k127_7205859_4 histidyl-tRNA synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000002655 240.0
PJD1_k127_7205859_5 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000003622 235.0
PJD1_k127_7268387_0 Glucose / Sorbosone dehydrogenase K21430 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016901,GO:0019842,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046872,GO:0048037,GO:0048038,GO:0055114,GO:0070968,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005866 557.0
PJD1_k127_7268387_1 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 408.0
PJD1_k127_7268387_10 PFAM Dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000002255 98.0
PJD1_k127_7268387_11 Hemerythrin HHE cation binding domain K07322 - - 0.0000000000002478 79.0
PJD1_k127_7268387_12 Protein of unknown function (DUF983) - - - 0.000000009471 64.0
PJD1_k127_7268387_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007387 267.0
PJD1_k127_7268387_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004908 273.0
PJD1_k127_7268387_4 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000001884 242.0
PJD1_k127_7268387_5 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000001867 239.0
PJD1_k127_7268387_6 cyclic diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000003186 201.0
PJD1_k127_7268387_7 Shikimate kinase K00851 - 2.7.1.12 0.00000000000000000000000000000000000009215 148.0
PJD1_k127_7268387_8 lyase activity - - - 0.000000000000000000000000000000002208 149.0
PJD1_k127_7268387_9 Universal stress protein - - - 0.000000000000000000003955 103.0
PJD1_k127_7314715_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 1.171e-273 848.0
PJD1_k127_7314715_1 5'-nucleotidase, C-terminal domain K11751 - 3.1.3.5,3.6.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 304.0
PJD1_k127_7314715_2 - K00241 - - 0.0000000000000000000000000000000000000000000000000000000000000009097 228.0
PJD1_k127_7314715_3 TIGRFAM outer membrane autotransporter barrel domain protein - - - 0.0000007804 61.0
PJD1_k127_7314715_4 Immunoglobulin-like domain of bacterial spore germination - - - 0.00007082 53.0
PJD1_k127_7368263_0 Transport of potassium into the cell K03549 - - 3.138e-234 740.0
PJD1_k127_7368263_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 408.0
PJD1_k127_7368263_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004173 322.0
PJD1_k127_7368263_3 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002207 265.0
PJD1_k127_7368263_4 Metallopeptidase family M24 K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000008187 232.0
PJD1_k127_7368263_5 N,N-dimethylaniline monooxygenase activity - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000001583 218.0
PJD1_k127_7368263_6 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000001618 112.0
PJD1_k127_7368263_7 peroxiredoxin activity K00627,K01607 - 2.3.1.12,4.1.1.44 0.0000000000000000000001355 104.0
PJD1_k127_7425975_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537,K01539 - 3.6.3.8,3.6.3.9 0.0 1180.0
PJD1_k127_7425975_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 2.834e-244 781.0
PJD1_k127_7425975_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 469.0
PJD1_k127_7425975_3 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 333.0
PJD1_k127_7425975_4 Anabaena sensory rhodopsin transducer - - - 0.00000000000000000000000000000000000000000000000000000000004634 207.0
PJD1_k127_7425975_5 redox protein regulator of disulfide bond formation - - - 0.0000000000000000000000000000000000000000000000003595 182.0
PJD1_k127_7425975_6 PFAM Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000009446 151.0
PJD1_k127_7425975_7 Methyl-viologen-reducing hydrogenase, delta subunit K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000001439 63.0
PJD1_k127_7464716_0 nodulation K00612 - - 1.677e-269 841.0
PJD1_k127_7464716_1 Tryptophan halogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 357.0
PJD1_k127_7464716_2 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 334.0
PJD1_k127_7464716_3 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000002616 173.0
PJD1_k127_7464716_4 Bacterial membrane protein, YfhO - - - 0.0000000000000000000000000000000003799 151.0
PJD1_k127_7464716_6 - - - - 0.0000000000007519 73.0
PJD1_k127_7464716_7 - - - - 0.000000002353 65.0
PJD1_k127_7485000_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1259.0
PJD1_k127_7485000_1 PFAM AMP-dependent synthetase and ligase K12429,K18660,K18661,K18662 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0051087 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005728 588.0
PJD1_k127_7485000_10 ThiS family K03636 - - 0.0000000000000002856 85.0
PJD1_k127_7485000_11 - - - - 0.0000000000001505 78.0
PJD1_k127_7485000_13 Rhodanese Homology Domain - - - 0.00000000007262 69.0
PJD1_k127_7485000_14 Rhodanese domain protein - - - 0.00007105 46.0
PJD1_k127_7485000_2 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 525.0
PJD1_k127_7485000_3 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000007998 179.0
PJD1_k127_7485000_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000277 165.0
PJD1_k127_7485000_5 PFAM Class II aldolase K01628 - 4.1.2.17 0.00000000000000000000000000000000000000339 154.0
PJD1_k127_7485000_6 PFAM OsmC family protein - - - 0.00000000000000000000000000000000002797 145.0
PJD1_k127_7485000_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000155 115.0
PJD1_k127_7485000_8 - - - - 0.000000000000000000000000827 105.0
PJD1_k127_7485000_9 Sulfurtransferase - - - 0.000000000000000000003286 95.0
PJD1_k127_7504091_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005304 458.0
PJD1_k127_7504091_1 PFAM response regulator receiver K02477 - - 0.00000000000000000000000000000000000000000000000000000000003577 214.0
PJD1_k127_7504091_2 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000001716 201.0
PJD1_k127_7504091_3 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.0000000000000000000000000000000000000000005835 167.0
PJD1_k127_7504091_4 TPM domain - - - 0.000000000000000000000000000000000009636 144.0
PJD1_k127_7504091_5 Peptidase family M23 K21472 - - 0.00000000000000000000000000000003674 135.0
PJD1_k127_7504091_6 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.0000000000000000000000000000007063 130.0
PJD1_k127_7504091_7 Dienelactone hydrolase family - - - 0.00000000000005156 85.0
PJD1_k127_7504091_8 Asparaginase K01424 - 3.5.1.1 0.000000000001516 68.0
PJD1_k127_7504091_9 Protein conserved in bacteria - - - 0.00008497 55.0
PJD1_k127_7537715_0 IgA Peptidase M64 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 526.0
PJD1_k127_7537715_1 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 431.0
PJD1_k127_7537715_10 peptidyl-tyrosine sulfation - - - 0.0000000000000000000005308 109.0
PJD1_k127_7537715_11 peptidase inhibitor activity - - - 0.0000000000000000001258 102.0
PJD1_k127_7537715_12 - - - - 0.00000000002797 71.0
PJD1_k127_7537715_13 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000002118 62.0
PJD1_k127_7537715_14 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000208 64.0
PJD1_k127_7537715_15 - - - - 0.00000008288 64.0
PJD1_k127_7537715_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 316.0
PJD1_k127_7537715_3 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000001609 221.0
PJD1_k127_7537715_4 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000001384 221.0
PJD1_k127_7537715_5 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000005753 203.0
PJD1_k127_7537715_6 Probable molybdopterin binding domain K03638,K03831 - 2.7.7.75 0.00000000000000000000000000000000000000008605 163.0
PJD1_k127_7537715_7 Responsible for synthesis of pseudouridine from uracil K06177,K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23,5.4.99.28,5.4.99.29 0.00000000000000000000000000000000004781 143.0
PJD1_k127_7537715_8 PFAM Glycosyl transferase family 2 K00786 - - 0.0000000000000000000000000005092 116.0
PJD1_k127_7537715_9 helix_turn_helix ASNC type - - - 0.0000000000000000000000005188 111.0
PJD1_k127_7618779_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009751 372.0
PJD1_k127_7618779_1 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000009769 247.0
PJD1_k127_7618779_2 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000001552 245.0
PJD1_k127_7618779_3 Angiotensin-converting enzyme K01283 - 3.4.15.1 0.0000000000000000000000000000000000000000000000000000000000004544 212.0
PJD1_k127_7618779_4 PFAM Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000000000000007158 220.0
PJD1_k127_7618779_5 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000002273 194.0
PJD1_k127_7618779_6 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000009493 171.0
PJD1_k127_7618779_7 von Willebrand factor type A domain - - - 0.00000000000000000000000000007066 128.0
PJD1_k127_7618779_8 Oxygen tolerance - - - 0.000000000000000005198 98.0
PJD1_k127_7618779_9 PFAM von Willebrand factor type A domain K07114 - - 0.0000002203 61.0
PJD1_k127_7720771_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase K00322 - 1.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 467.0
PJD1_k127_7720771_1 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000004088 196.0
PJD1_k127_7720771_2 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000008444 160.0
PJD1_k127_7720771_3 chaperone-mediated protein folding K12132 - 2.7.11.1 0.00000000000000000000000000005011 136.0
PJD1_k127_7720771_4 Acylphosphatase K01512 - 3.6.1.7 0.0000000000001503 75.0
PJD1_k127_7743929_0 Aldo Keto reductase K05275 - 1.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 342.0
PJD1_k127_7743929_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 335.0
PJD1_k127_7743929_2 Zinc-binding dehydrogenase K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 317.0
PJD1_k127_7743929_3 Prephenate dehydratase K04518 - 4.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001139 277.0
PJD1_k127_7743929_4 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002909 257.0
PJD1_k127_7743929_5 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000708 263.0
PJD1_k127_7743929_6 MafB19-like deaminase K01485 - 3.5.4.1 0.0000000000000000000000000000000000000000000000000000000000000000006735 234.0
PJD1_k127_7743929_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000004223 131.0
PJD1_k127_7743929_8 Helix-turn-helix XRE-family like proteins - - - 0.000000000003615 70.0
PJD1_k127_7743929_9 - - - - 0.0000003244 56.0
PJD1_k127_7769217_0 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 357.0
PJD1_k127_7769217_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000001556 244.0
PJD1_k127_7769217_2 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000004592 179.0
PJD1_k127_7769217_3 Thioesterase superfamily K07107 - - 0.00000000000000000000000000000005347 129.0
PJD1_k127_7769217_4 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000007968 134.0
PJD1_k127_7769217_5 Predicted membrane protein (DUF2318) - - - 0.00005568 52.0
PJD1_k127_7769887_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 9.599e-258 817.0
PJD1_k127_7769887_1 glutamine synthetase K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 520.0
PJD1_k127_7769887_2 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000001129 199.0
PJD1_k127_7769887_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000522 181.0
PJD1_k127_7769887_4 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000001707 140.0
PJD1_k127_7769887_5 MgtC SapB transporter K07507 GO:0008150,GO:0009405,GO:0044419,GO:0051704 - 0.000000000000000000000009504 109.0
PJD1_k127_7769887_6 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000004397 86.0
PJD1_k127_7804975_0 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000007338 212.0
PJD1_k127_7804975_1 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000001515 177.0
PJD1_k127_7804975_2 ZIP Zinc transporter K16267 - - 0.000000000000000000000000000000000000000000000298 175.0
PJD1_k127_7804975_3 COG4635 Flavodoxin K00230 - 1.3.5.3 0.0000000000000000000000000000003018 136.0
PJD1_k127_7804975_4 signal-transduction protein containing cAMP-binding and CBS domains K00031,K14446 - 1.1.1.42,1.3.1.85 0.000000000000000000000000004236 116.0
PJD1_k127_7804975_5 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.000000000000000000158 99.0
PJD1_k127_7804975_6 Universal stress protein family - - - 0.000000000000000004819 95.0
PJD1_k127_7805531_0 polyribonucleotide nucleotidyltransferase activity K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 9.805e-216 694.0
PJD1_k127_7805531_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 338.0
PJD1_k127_7805531_2 PFAM oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001195 278.0
PJD1_k127_7805531_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000009134 224.0
PJD1_k127_7805531_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000004729 156.0
PJD1_k127_7805531_5 Ribosomal_S15 K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000001264 132.0
PJD1_k127_7805531_6 helix_turn_helix, arabinose operon control protein - - - 0.00000000000005957 85.0
PJD1_k127_7834484_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 492.0
PJD1_k127_7834484_1 Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 436.0
PJD1_k127_7834484_10 Competence protein - - - 0.00000000000000000000000007717 116.0
PJD1_k127_7834484_11 Protein of unknown function (DUF2721) - - - 0.000000000000000000000002103 114.0
PJD1_k127_7834484_12 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 0.0007787 50.0
PJD1_k127_7834484_2 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007274 261.0
PJD1_k127_7834484_3 O-methyltransferase K00588 - 2.1.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000001285 250.0
PJD1_k127_7834484_4 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000004994 203.0
PJD1_k127_7834484_5 PFAM Uracil-DNA glycosylase superfamily K03648 - 3.2.2.27 0.000000000000000000000000000000000000000000000000009105 191.0
PJD1_k127_7834484_6 Splits dipeptides with a prolyl residue in the C- terminal position K01271 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009056,GO:0009987,GO:0016787,GO:0016805,GO:0019538,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0070573,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.13.9 0.00000000000000000000000000000000000000000000000001772 182.0
PJD1_k127_7834484_7 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008781,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016311,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016791,GO:0019143,GO:0033692,GO:0034637,GO:0034645,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 3.1.3.45 0.000000000000000000000000000000000000000000947 165.0
PJD1_k127_7834484_8 hydrolase activity, acting on ester bonds K01259 - 3.4.11.5 0.00000000000000000000000000002084 132.0
PJD1_k127_7834484_9 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000001433 120.0
PJD1_k127_7876289_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 8.932e-242 758.0
PJD1_k127_7876289_1 ATP dependent DNA ligase C terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 404.0
PJD1_k127_7876289_2 Peptidase M15 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 311.0
PJD1_k127_7876289_3 dna ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000006729 235.0
PJD1_k127_7876289_4 dna ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000003759 205.0
PJD1_k127_7876289_5 - - - - 0.0000000000000000000000000000000000000000557 158.0
PJD1_k127_7876289_7 von Willebrand factor, type A - - - 0.0000000000000001354 93.0
PJD1_k127_7876289_8 Fic/DOC family K07341 - - 0.00007714 53.0
PJD1_k127_7882173_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004309 340.0
PJD1_k127_7882173_1 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001209 255.0
PJD1_k127_7882173_2 Domain of unknown function (DUF4388) - - - 0.000000000000000000000000000000000000000000000000000000004699 215.0
PJD1_k127_7882173_3 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000007187 181.0
PJD1_k127_7882173_4 Cytochrome oxidase complex assembly protein 1 - - - 0.00000000000000000000000000372 120.0
PJD1_k127_7882173_5 Glycosyl transferases group 1 - - - 0.00000000000000000000000004597 121.0
PJD1_k127_7882173_6 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000009531 104.0
PJD1_k127_7882173_7 Lecithin:cholesterol acyltransferase - - - 0.000000000007304 77.0
PJD1_k127_7882173_8 Domain of unknown function (DUF1844) - - - 0.00000000001817 71.0
PJD1_k127_815396_0 Cytochrome c - - - 9.564e-199 630.0
PJD1_k127_815396_1 cyclic nucleotide binding K15762 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 534.0
PJD1_k127_815396_10 AAA ATPase domain - - - 0.000000000000000000004932 102.0
PJD1_k127_815396_11 ABC-type transport auxiliary lipoprotein component K09857 - - 0.0000000000006127 77.0
PJD1_k127_815396_12 FHA domain K07315 - 3.1.3.3 0.000000001902 67.0
PJD1_k127_815396_13 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000002489 58.0
PJD1_k127_815396_2 oligopeptide transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 508.0
PJD1_k127_815396_3 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000002747 249.0
PJD1_k127_815396_4 Paraquat-inducible protein B K06192 - - 0.00000000000000000000000000000000000000000000000000000000000000006989 244.0
PJD1_k127_815396_5 TLC ATP/ADP transporter K03301 - - 0.0000000000000000000000000000000000000000000000000000002701 222.0
PJD1_k127_815396_6 paraquat-inducible protein A K03808 - - 0.0000000000000000000000000000000000000008803 166.0
PJD1_k127_815396_7 PFAM DoxX family protein K15977 - - 0.00000000000000000000000000000000000000239 153.0
PJD1_k127_815396_8 Belongs to the Fur family K03711,K09825 - - 0.0000000000000000000000000000004298 128.0
PJD1_k127_815396_9 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000001078 115.0
PJD1_k127_823333_0 Insulinase (Peptidase family M16) - - - 0.0 1163.0
PJD1_k127_823333_1 Putative glucoamylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 585.0
PJD1_k127_823333_2 ABC transporter substrate-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 441.0
PJD1_k127_823333_3 Binding-protein-dependent transport system inner membrane component K02025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005765 378.0
PJD1_k127_823333_4 ABC-type sugar transport system, permease component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 337.0
PJD1_k127_823333_5 Transport of potassium into the cell K03549 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008681 242.0
PJD1_k127_838575_0 Carboxypeptidase regulatory-like domain - - - 0.0 1036.0
PJD1_k127_838575_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 315.0
PJD1_k127_838575_2 Ferritin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006866 248.0
PJD1_k127_838575_3 PFAM glycosyl transferase family 2 K14597 - - 0.000000000000000000000000000000000000000000000008198 186.0
PJD1_k127_838575_4 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000003814 183.0
PJD1_k127_838575_5 glycolate biosynthetic process K01091,K06019,K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.18,3.6.1.1 0.00000000000000000000000000000000000004014 156.0
PJD1_k127_838575_6 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000002958 85.0
PJD1_k127_838575_7 PFAM Methyltransferase type 11 - - - 0.000000000000006084 84.0
PJD1_k127_838575_8 RNA-binding protein K07574 - - 0.00000000000002637 75.0
PJD1_k127_892153_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 362.0
PJD1_k127_892153_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000004432 192.0
PJD1_k127_892153_2 ABC-type multidrug transport system ATPase K01990 - - 0.00000000000000000000000000000000000000000000000005742 189.0
PJD1_k127_892153_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000009459 137.0
PJD1_k127_892153_4 protein conserved in bacteria - - - 0.000000000000000000000000000002295 135.0
PJD1_k127_892153_5 GntR family transcriptional regulator K07979 - - 0.00000000000000000002871 95.0
PJD1_k127_892153_6 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000000001311 83.0
PJD1_k127_922164_0 Dehydrogenase E1 component K00615 - 2.2.1.1 0.0 1014.0
PJD1_k127_922164_1 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 424.0
PJD1_k127_922164_2 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006285 377.0
PJD1_k127_922164_3 spore germination - - - 0.0000000000000000000000000000000000000000004467 165.0
PJD1_k127_922164_4 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000006842 160.0
PJD1_k127_922164_5 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000007974 144.0
PJD1_k127_922164_6 protein import - - - 0.0000000000007029 81.0
PJD1_k127_922164_7 membrane protein domain - - - 0.000752 48.0
PJD1_k127_928812_0 Multicopper oxidase K22348 - 1.16.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 545.0
PJD1_k127_928812_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 481.0
PJD1_k127_928812_10 Serine aminopeptidase, S33 - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000003022 128.0
PJD1_k127_928812_11 AI-2E family transporter - - - 0.000000000000000002385 98.0
PJD1_k127_928812_12 Copper resistance K07233 - - 0.0000000000007575 79.0
PJD1_k127_928812_13 Bacterial regulatory proteins, tetR family - - - 0.000000000004682 76.0
PJD1_k127_928812_14 - - - - 0.00002723 54.0
PJD1_k127_928812_2 PFAM AMP-dependent synthetase and ligase K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 439.0
PJD1_k127_928812_3 transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000389 369.0
PJD1_k127_928812_4 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009142 309.0
PJD1_k127_928812_5 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 316.0
PJD1_k127_928812_6 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002267 265.0
PJD1_k127_928812_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001023 240.0
PJD1_k127_928812_8 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000007213 251.0
PJD1_k127_928812_9 Cytochrome c K03611 - - 0.000000000000000000000000000000000000000000000000004071 189.0
PJD1_k127_994733_0 GTPase activity K03596 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0006950,GO:0006970,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009268,GO:0009409,GO:0009628,GO:0009651,GO:0009987,GO:0010467,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042802,GO:0043021,GO:0043023,GO:0043024,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 1.076e-255 801.0
PJD1_k127_994733_1 Bacterial protein of unknown function (DUF853) K06915 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 476.0
PJD1_k127_994733_2 PFAM NAD binding domain of 6-phosphogluconate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000381 280.0
PJD1_k127_994733_3 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009309 271.0
PJD1_k127_994733_4 sigma factor antagonist activity K04757,K17752 - 2.7.11.1 0.000000000000000000000000000000000001629 143.0
PJD1_k127_994733_5 STAS domain - - - 0.000000000000000000000000000000001485 133.0
PJD1_k127_994733_6 Zn peptidase - - - 0.00000000000000000000000000715 124.0