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Overview

ID MAG02913
Name PJD2_bin.34
Sample SMP0068
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Chitinophagales
Family Chitinophagaceae
Genus JJ008
Species
Assembly information
Completeness (%) 71.06
Contamination (%) 1.01
GC content (%) 46.0
N50 (bp) 2,342
Genome size (bp) 1,947,726

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2216

Gene name Description KEGG GOs EC E-value Score Sequence
PJD2_k127_1004462_0 COGs COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 383.0
PJD2_k127_1004462_1 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 367.0
PJD2_k127_1004462_2 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000004449 60.0
PJD2_k127_1022865_0 ABC transporter K15738 - - 1.183e-300 932.0
PJD2_k127_1026802_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 0.0 1058.0
PJD2_k127_1026802_1 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 384.0
PJD2_k127_1026802_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000004973 126.0
PJD2_k127_1026802_3 WD-40 repeat - - - 0.00000000000000000000002516 104.0
PJD2_k127_1032354_0 thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 323.0
PJD2_k127_1032354_1 PFAM Cytochrome c-type biogenesis protein CcmB K02194 - - 0.0000000000000000000000000000000000000000000000000000000000001042 218.0
PJD2_k127_1032354_2 - - - - 0.000000000000000000000000000000000000000000000002079 181.0
PJD2_k127_1032354_3 - - - - 0.000000000000000000001035 106.0
PJD2_k127_1035828_0 PFAM Helicase conserved C-terminal domain K08282 - 2.7.11.1 3.879e-231 719.0
PJD2_k127_1035828_1 receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 476.0
PJD2_k127_1053528_0 Cys/Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 528.0
PJD2_k127_1053528_1 Gnat family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002509 238.0
PJD2_k127_1053528_2 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000551 146.0
PJD2_k127_1053528_3 Pfam DinB family - - - 0.0000000000000000000009324 97.0
PJD2_k127_1054808_0 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 506.0
PJD2_k127_106198_0 COGs COG0044 Dihydroorotase and related cyclic amidohydrolase K01464 - 3.5.2.2 4.42e-232 721.0
PJD2_k127_106198_1 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 0.00000000000000000000000000000000000000000000000000000000000006526 216.0
PJD2_k127_1064283_0 response regulator, receiver K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 369.0
PJD2_k127_1064283_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 367.0
PJD2_k127_1064283_2 membrane protein (DUF2154) - - - 0.000000000000000000000000000000000000000000000000000000000000000009925 233.0
PJD2_k127_1064283_3 Guanylate cyclase - - - 0.00000000000000000000000000000000000000000007247 162.0
PJD2_k127_1064283_4 Protein of unknown function (DUF3078) - - - 0.0000000000000001651 82.0
PJD2_k127_1064337_0 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 9.811e-210 660.0
PJD2_k127_1067865_0 PFAM Formylglycine-generating sulfatase enzyme - - - 2.98e-216 679.0
PJD2_k127_1067865_1 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 517.0
PJD2_k127_1067865_2 TIGRFAM gliding motility-associated protein GldL - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000269 276.0
PJD2_k127_1067865_3 Gliding motility-associated protein GldM - - - 0.0000000000000001664 80.0
PJD2_k127_1080400_0 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000000000000000000000000000000000000000000000001607 188.0
PJD2_k127_1080400_1 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000002111 108.0
PJD2_k127_1090155_0 Pseudouridine synthase K06179,K06180 - 5.4.99.23,5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000004286 233.0
PJD2_k127_1090155_1 AhpC TSA family K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000008539 204.0
PJD2_k127_1090155_2 Protein of unknown function (DUF2490) - - - 0.0000000000000000000000000000000000000000000000000000000317 205.0
PJD2_k127_1090727_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 349.0
PJD2_k127_1090727_2 - - - - 0.0000000000000000000000000000000000000000000000000006274 186.0
PJD2_k127_1090727_3 protein-disulfide reductase activity K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000467 164.0
PJD2_k127_1096035_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 2.548e-204 643.0
PJD2_k127_1102396_0 Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007137 576.0
PJD2_k127_1102396_1 PFAM Uncharacterised BCR, COG1649 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 373.0
PJD2_k127_1102396_2 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000005278 187.0
PJD2_k127_1102396_3 PFAM Allophanate hydrolase subunit 1 K06351 - - 0.00000000000000000000000000000000000000000000004596 175.0
PJD2_k127_1102396_4 DinB family - - - 0.000000000000000000000000000000000000000001786 160.0
PJD2_k127_1102396_5 Ketosteroid isomerase-related protein - - - 0.000000000000000000000001114 104.0
PJD2_k127_1102396_6 Ketosteroid isomerase-related protein - - - 0.000002772 51.0
PJD2_k127_110447_0 von Willebrand factor, type A - - - 1.428e-196 616.0
PJD2_k127_110447_1 Protein of unknown function (DUF2723) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000533 589.0
PJD2_k127_1107531_0 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000008635 229.0
PJD2_k127_1107531_1 peptidase M42 - - - 0.00000000000002155 74.0
PJD2_k127_1107531_2 Transglutaminase-like superfamily - - - 0.000000000003269 77.0
PJD2_k127_1115046_0 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005567 603.0
PJD2_k127_1115046_1 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 512.0
PJD2_k127_1115046_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000001528 82.0
PJD2_k127_1115046_3 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000001313 57.0
PJD2_k127_1115133_0 Psort location OuterMembrane, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 390.0
PJD2_k127_1115133_1 photosystem II stabilization - - - 0.00000000000000000000000000000000000000000000003909 178.0
PJD2_k127_1122107_0 PFAM Acetyl-CoA hydrolase transferase - - - 3.7e-219 686.0
PJD2_k127_1122107_1 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000002902 164.0
PJD2_k127_1122107_2 serine-type endopeptidase activity K04771 - 3.4.21.107 0.0000000000001646 78.0
PJD2_k127_1129862_0 Domain of unknown function (DUF3472) - - - 0.0000000000000000000000000000000000000000001255 172.0
PJD2_k127_1129862_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000001835 58.0
PJD2_k127_1129862_2 Rhodanese Homology Domain - - - 0.00000004472 63.0
PJD2_k127_1132114_0 F5 8 type C domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002256 269.0
PJD2_k127_1132114_1 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003592 231.0
PJD2_k127_1132114_2 Parallel beta-helix repeats - - - 0.0000000000000005897 93.0
PJD2_k127_1133319_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1187.0
PJD2_k127_1133319_1 Participates in both transcription termination and antitermination K02600 - - 4.777e-234 727.0
PJD2_k127_1133319_2 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000008685 193.0
PJD2_k127_1133319_3 peptidylprolyl isomerase K03771 - 5.2.1.8 0.000000000000000000000000000000000000002412 151.0
PJD2_k127_1133319_4 peptidylprolyl isomerase K03771 - 5.2.1.8 0.0000000000000000000000000000003169 124.0
PJD2_k127_1136073_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 8.293e-239 742.0
PJD2_k127_1136073_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001978 274.0
PJD2_k127_1136073_2 Domain of unknown function (DUF4293) - - - 0.0000000000000000000000002218 110.0
PJD2_k127_1136537_0 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005331 460.0
PJD2_k127_1136537_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002287 250.0
PJD2_k127_1140827_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000009065 189.0
PJD2_k127_1140827_2 protein targeting K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.000000000000000003052 91.0
PJD2_k127_1140865_0 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005835 256.0
PJD2_k127_1140865_1 Protein of unknown function (DUF998) - - - 0.000000000000000000000000000000000000000000000000000000003009 201.0
PJD2_k127_1152164_0 tRNA nucleotidyltransferase K00970,K00974 - 2.7.7.19,2.7.7.72 9.64e-223 699.0
PJD2_k127_1152164_1 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 422.0
PJD2_k127_1152164_2 Plasmid pRiA4b ORF-3-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008171 263.0
PJD2_k127_1152886_0 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000001302 197.0
PJD2_k127_1152886_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000001106 106.0
PJD2_k127_1152886_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000000002859 100.0
PJD2_k127_1153519_0 Motility related/secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 568.0
PJD2_k127_1153519_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000707 560.0
PJD2_k127_1153519_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000006537 237.0
PJD2_k127_1153519_3 Pfam DinB family - - - 0.000000000000000000000000000000637 124.0
PJD2_k127_1158158_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005684 469.0
PJD2_k127_1164225_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 366.0
PJD2_k127_1164225_1 Belongs to the proline racemase family K12658 - 5.1.1.8 0.00000000000000000000000000000000000000000000004526 169.0
PJD2_k127_1164582_0 LAO AO transport system ATPase K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 379.0
PJD2_k127_1176366_0 Oxygen tolerance - - - 0.0000000000000000000000000000000000000000000000000000000000000109 232.0
PJD2_k127_1183462_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0 1016.0
PJD2_k127_1183462_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 539.0
PJD2_k127_1183462_2 NUMOD4 motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002122 266.0
PJD2_k127_1196056_0 Alpha-glucosidase K01187,K21574 - 3.2.1.20,3.2.1.3 1.112e-257 804.0
PJD2_k127_1196056_1 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01560,K07025 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000135 246.0
PJD2_k127_1196056_2 B12 binding domain K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000002145 231.0
PJD2_k127_1196056_3 PQ loop repeat K15383 - - 0.000000000000000000000001634 104.0
PJD2_k127_1206667_0 MBOAT, membrane-bound O-acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 600.0
PJD2_k127_1206667_1 COG2755 Lysophospholipase L1 and related esterases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 303.0
PJD2_k127_1226018_0 ABC transporter K06147 - - 6.834e-290 900.0
PJD2_k127_1226018_1 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000005743 230.0
PJD2_k127_1226018_2 Rhodanese Homology Domain - - - 0.000000000000000000000209 100.0
PJD2_k127_1229984_0 SET domain - - - 0.00000000000000000000000000000000000000000000000007276 183.0
PJD2_k127_1229984_1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01921 - 6.3.2.4 0.00000000000004131 74.0
PJD2_k127_1229984_2 Helix-turn-helix domain K15255 - 3.6.4.12 0.0000000000144 67.0
PJD2_k127_1230825_0 Phage tail sheath C-terminal domain K06907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006611 286.0
PJD2_k127_1230825_1 Protein of unknown function (DUF4255) - - - 0.00000000000000000000000000000007745 132.0
PJD2_k127_1230825_2 - - - - 0.000002191 59.0
PJD2_k127_1230825_3 - - - - 0.00001365 53.0
PJD2_k127_1235877_0 PFAM Cytochrome c, class I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 422.0
PJD2_k127_1235877_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000002699 159.0
PJD2_k127_1237118_0 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431,K12251 - 3.5.1.53,3.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006053 572.0
PJD2_k127_1237118_1 TIGRFAM dihydroorotase, multifunctional complex type K01464 - 3.5.2.2 0.000000000000000000000006479 101.0
PJD2_k127_1237118_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266,K17722 - 1.3.1.1,1.4.1.13,1.4.1.14 0.0000000817 54.0
PJD2_k127_1237957_0 Caspase domain - - - 0.00000000000000000000000000000000004646 147.0
PJD2_k127_1239755_1 - - - - 0.00000000002171 68.0
PJD2_k127_1248324_0 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 582.0
PJD2_k127_1248324_1 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009129 407.0
PJD2_k127_1248324_2 Glycosyl transferase family group 2 K07011 - - 0.0000000000000000000001695 98.0
PJD2_k127_1253019_0 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009368 278.0
PJD2_k127_1253019_1 Outer membrane protein beta-barrel domain - - - 0.000000000000000002851 94.0
PJD2_k127_1270090_0 COGs COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 606.0
PJD2_k127_1270090_1 Cupin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000006954 212.0
PJD2_k127_1270090_2 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000105 145.0
PJD2_k127_1284620_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1257.0
PJD2_k127_1284620_1 COG2755 Lysophospholipase L1 and related - - - 0.0000000000000000000000000000000000000000000000000000000000000001917 226.0
PJD2_k127_1290637_0 Protein of unknown function (DUF1501) - - - 1.289e-202 642.0
PJD2_k127_1290637_1 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003183 250.0
PJD2_k127_1290637_2 domain protein - - - 0.000003391 56.0
PJD2_k127_1302858_0 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 381.0
PJD2_k127_1302858_1 GCN5 family acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000007944 223.0
PJD2_k127_1315020_0 aconitate hydratase K01681 - 4.2.1.3 1.667e-277 860.0
PJD2_k127_1315020_1 Cysteine desulfurase K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 577.0
PJD2_k127_1315020_2 Aconitase C-terminal domain K01681 - 4.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 387.0
PJD2_k127_1315020_3 BlaR1 peptidase M56 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 326.0
PJD2_k127_1315020_4 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002379 280.0
PJD2_k127_1315020_5 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000007343 171.0
PJD2_k127_1315020_6 PFAM PspC domain - - - 0.0000000000000000000000000000001782 124.0
PJD2_k127_1315020_7 SWI complex, BAF60b domains - - - 0.0000000000000003651 78.0
PJD2_k127_1315020_8 Secreted and surface protein containing fasciclin-like repeats - - - 0.0000000000000006551 82.0
PJD2_k127_1315020_9 - - - - 0.0000132 49.0
PJD2_k127_132118_0 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007947 327.0
PJD2_k127_1323893_0 COGs COG0491 Zn-dependent hydrolase including glyoxylase - - - 5.567e-213 670.0
PJD2_k127_1323893_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008427 281.0
PJD2_k127_1334223_0 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000003511 220.0
PJD2_k127_1334223_1 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000000000000000000000000000005236 188.0
PJD2_k127_1334223_2 Metallopeptidase family M24 - - - 0.0000000000000000000000000000000000000006793 149.0
PJD2_k127_1353102_0 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 589.0
PJD2_k127_1353102_1 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000001794 226.0
PJD2_k127_1354364_0 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004845 563.0
PJD2_k127_1354364_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 291.0
PJD2_k127_1355053_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 1.584e-205 645.0
PJD2_k127_1355053_1 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000002361 132.0
PJD2_k127_1355053_2 Rieske (2Fe-2S) domain K05710 - - 0.00000000000000000000000000000002062 129.0
PJD2_k127_1356890_0 Astacin (Peptidase family M12A) - - - 0.0000000000000000000000000000000000003972 157.0
PJD2_k127_1368880_0 PFAM GumN - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002178 273.0
PJD2_k127_1368880_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000008603 107.0
PJD2_k127_1378561_0 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 386.0
PJD2_k127_1378561_1 Single-stranded DNA-binding protein K03111 - - 0.000000000000000000000000000000000000000000000000000000000000000000001862 237.0
PJD2_k127_1378561_2 Transporter associated domain - - - 0.0000003306 54.0
PJD2_k127_1382276_0 PFAM Peptidase M1 membrane alanine aminopeptidase K01256 - 3.4.11.2 9.336e-297 922.0
PJD2_k127_1382276_1 PFAM Peptidase M1 membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000679 138.0
PJD2_k127_1382276_2 translation initiation factor activity K02487,K13582 - - 0.0000000008966 61.0
PJD2_k127_1385304_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008608 267.0
PJD2_k127_1385304_1 undecaprenyl-phosphate glucose phosphotransferase activity K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000001436 228.0
PJD2_k127_1389961_0 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007042 300.0
PJD2_k127_1389961_1 CRP FNR family K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 290.0
PJD2_k127_1389961_2 Tetratricopeptide repeat - - - 0.00000000000000000000000002092 109.0
PJD2_k127_1395205_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.363e-293 915.0
PJD2_k127_1395205_1 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007348 400.0
PJD2_k127_1395205_2 Prolyl oligopeptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 318.0
PJD2_k127_1395205_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000003042 229.0
PJD2_k127_1395205_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000001553 218.0
PJD2_k127_1400724_0 phosphohydrolase K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004992 560.0
PJD2_k127_1400724_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000941 68.0
PJD2_k127_1400724_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000002866 66.0
PJD2_k127_1402280_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 0.0 1024.0
PJD2_k127_1413777_0 TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007361 584.0
PJD2_k127_1419828_0 Gliding motility-associated C-terminal domain - - - 0.000000000000000000000000121 110.0
PJD2_k127_1419828_1 membrane - - - 0.00000000000000000002836 98.0
PJD2_k127_1425188_0 PFAM Activator of Hsp90 ATPase - - - 0.0000000000000000000000000000000000000000000000002908 179.0
PJD2_k127_1427481_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 574.0
PJD2_k127_1435254_0 Concanavalin A-like lectin/glucanases superfamily - - - 0.00000000000000000000000000000000000000000124 166.0
PJD2_k127_1435254_1 Putative glucoamylase - - - 0.000003411 54.0
PJD2_k127_1442995_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 1.066e-247 774.0
PJD2_k127_1442995_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 320.0
PJD2_k127_1446138_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000006416 209.0
PJD2_k127_1446138_1 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000005733 209.0
PJD2_k127_1446138_2 PFAM Bacterial regulatory proteins, luxR family - - - 0.00000000000000000000000000000000000003596 151.0
PJD2_k127_1449503_0 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 498.0
PJD2_k127_1449503_1 ABC transporter transmembrane region K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000006962 228.0
PJD2_k127_1450047_0 Male sterility protein K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 332.0
PJD2_k127_1452279_0 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 415.0
PJD2_k127_1452334_0 ABC transporter K03701 - - 1.466e-230 726.0
PJD2_k127_1452334_1 Belongs to the peptidase S8 family - - - 0.00000000003253 73.0
PJD2_k127_1460976_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 2.18e-201 634.0
PJD2_k127_1460976_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007462 364.0
PJD2_k127_1460976_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000001198 75.0
PJD2_k127_1463502_0 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 574.0
PJD2_k127_1463502_1 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000007876 187.0
PJD2_k127_1463502_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000001192 189.0
PJD2_k127_1475796_0 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000004128 208.0
PJD2_k127_1475796_1 tryptophanase activity K01667 - 4.1.99.1 0.0000000000000000000000000000000000000000000000000000002713 197.0
PJD2_k127_1475796_2 Pfam:DUF59 - - - 0.000000000000000000000000000000000000000004414 156.0
PJD2_k127_1475796_3 Belongs to the heme-copper respiratory oxidase family - - - 0.0000000000000000000001528 99.0
PJD2_k127_1477135_0 Peptidase family M1 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 515.0
PJD2_k127_1497707_0 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 491.0
PJD2_k127_1497707_1 Protein of unknown function (DUF1015) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 317.0
PJD2_k127_1500217_0 Transcriptional regulator, asnc family K03718 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009106 262.0
PJD2_k127_1500835_0 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 285.0
PJD2_k127_1500835_1 Peptidase M1, membrane alanine aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000002296 190.0
PJD2_k127_1500835_2 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000000000000000000000804 173.0
PJD2_k127_1505559_0 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000005959 243.0
PJD2_k127_1505559_1 Hep Hag repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001777 242.0
PJD2_k127_1505559_2 - - - - 0.0008902 49.0
PJD2_k127_1511423_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006271 503.0
PJD2_k127_1511423_1 phosphoesterase, PA-phosphatase related - - - 0.000000000000000000000000000000000000000000000000000000000007724 215.0
PJD2_k127_1511423_2 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - 0.0000000000000000000000000000000000000000002404 164.0
PJD2_k127_1517641_0 Protein of unknown function (DUF2452) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007985 343.0
PJD2_k127_1517641_1 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000004454 193.0
PJD2_k127_1539121_0 Preprotein translocase subunit YajC K03210 - - 0.000000000000000000000000000000000000003235 150.0
PJD2_k127_1539121_1 InterPro IPR011467 - - - 0.00000000000000000000003306 104.0
PJD2_k127_1539121_2 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000003899 48.0
PJD2_k127_1542596_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 344.0
PJD2_k127_1542596_1 DNA protecting protein DprA K04096 - - 0.00000000000000000000000000034 116.0
PJD2_k127_1543934_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 1.089e-266 826.0
PJD2_k127_1543934_1 Metalloenzyme superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004797 420.0
PJD2_k127_155092_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 433.0
PJD2_k127_155092_1 Damage-inducible protein DinB - - - 0.000000000000000000000000000000000000000000000005497 177.0
PJD2_k127_1572158_0 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.000000000000000000000000000000000000000000000000000002361 194.0
PJD2_k127_1572158_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000002614 165.0
PJD2_k127_1572158_2 Protein of unknown function (DUF1328) - - - 0.00000000000000003237 82.0
PJD2_k127_1572158_3 YtxH-like protein - - - 0.0000000000001241 75.0
PJD2_k127_1572856_0 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 613.0
PJD2_k127_1572856_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000001129 57.0
PJD2_k127_1591690_0 Outer membrane protein protective antigen OMA87 - - - 0.00000000000000000000000000000000000000000000000000000000000000002428 245.0
PJD2_k127_1591690_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000007151 59.0
PJD2_k127_1592598_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 315.0
PJD2_k127_1592598_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006454 275.0
PJD2_k127_159884_0 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 301.0
PJD2_k127_159884_1 translation initiation factor activity K02487,K13582 - - 0.0000395 46.0
PJD2_k127_1617501_0 gliding motility-associated C-terminal domain - - - 0.000000000000000000000000000000000000000000000001516 192.0
PJD2_k127_1617501_1 C-terminal domain of CHU protein family - - - 0.00000462 59.0
PJD2_k127_1622137_0 PFAM NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 504.0
PJD2_k127_1622137_1 phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008653 449.0
PJD2_k127_1622137_2 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 396.0
PJD2_k127_1622137_3 COGs COG1392 Phosphate transport regulator (distant homolog of PhoU) K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000688 330.0
PJD2_k127_1622137_4 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 303.0
PJD2_k127_1629891_0 Asparaginyl-tRNA synthetase K01893 - 6.1.1.22 9.662e-197 617.0
PJD2_k127_1629891_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000009652 214.0
PJD2_k127_1632769_0 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 396.0
PJD2_k127_1632769_1 Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 308.0
PJD2_k127_1632769_2 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000008532 199.0
PJD2_k127_1636998_0 - - - - 0.00000000000000000000000000000000000000000000001419 186.0
PJD2_k127_1649621_0 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000943 371.0
PJD2_k127_1649621_1 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000004714 259.0
PJD2_k127_1649621_2 PFAM Sigma 54 modulation protein S30EA ribosomal protein K05808 - - 0.00000000000000000000000000000000002249 137.0
PJD2_k127_1649621_3 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000000000000000006593 111.0
PJD2_k127_1649621_4 Acyltransferase - - - 0.0002881 46.0
PJD2_k127_1650734_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000001127 183.0
PJD2_k127_1650734_1 Permease, YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000001055 170.0
PJD2_k127_1650734_2 - - - - 0.0000000000000000000000000000000001164 142.0
PJD2_k127_1658436_0 Heat shock 70 kDa protein K04043 - - 1.761e-217 676.0
PJD2_k127_1658436_1 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0001496 44.0
PJD2_k127_1679330_0 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 0.0 1357.0
PJD2_k127_1685409_0 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009003 257.0
PJD2_k127_1685409_1 - - - - 0.0000000000000000000000000000005833 127.0
PJD2_k127_1688707_0 lysine 2,3-aminomutase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 520.0
PJD2_k127_1695328_0 with chaperone activity ATP-binding subunit K03696 - - 0.0 1341.0
PJD2_k127_1695328_1 antisigma factor binding K04749 - - 0.0000000000000000000000000000000004624 134.0
PJD2_k127_1697906_0 PFAM BNR Asp-box repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 443.0
PJD2_k127_1697906_1 - - - - 0.000000000000000000000000000000000000000004403 159.0
PJD2_k127_1698233_0 Domain of unknown function (DUF4290) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007747 342.0
PJD2_k127_1698233_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 309.0
PJD2_k127_173385_0 Motility related/secretion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000884 483.0
PJD2_k127_173385_1 PFAM DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004044 270.0
PJD2_k127_176181_0 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 353.0
PJD2_k127_176181_1 Peptidase family M1 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005714 308.0
PJD2_k127_176181_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 304.0
PJD2_k127_176181_3 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000001386 195.0
PJD2_k127_176181_4 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000242 132.0
PJD2_k127_1767399_0 alpha-2-macroglobulin domain protein K06894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 578.0
PJD2_k127_178076_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 1.294e-245 768.0
PJD2_k127_178076_1 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000002278 174.0
PJD2_k127_178076_2 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000003892 146.0
PJD2_k127_1795242_0 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007347 324.0
PJD2_k127_1795242_1 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.000000000442 61.0
PJD2_k127_1796850_0 Zinc metalloprotease (Elastase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 395.0
PJD2_k127_1811084_0 COG2373 Large extracellular alpha-helical protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 348.0
PJD2_k127_1817741_0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000001008 219.0
PJD2_k127_1817741_1 - - - - 0.0000000000000000000000001152 111.0
PJD2_k127_1817741_2 Histidine kinase - - - 0.00000000001892 65.0
PJD2_k127_1822220_0 seryl-tRNA synthetase K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 402.0
PJD2_k127_1822220_1 Peptidyl-prolyl cis-trans isomerase K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000003938 252.0
PJD2_k127_1822220_2 - - - - 0.0000000000000000000000000000000000000000000000000000001506 197.0
PJD2_k127_1825350_0 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 496.0
PJD2_k127_1825350_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004741 261.0
PJD2_k127_1825350_2 Gram-negative bacterial TonB protein C-terminal - - - 0.000000002118 61.0
PJD2_k127_1828134_0 PFAM Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 3.003e-282 874.0
PJD2_k127_1828134_1 PFAM Periplasmic copper-binding protein (NosD) K07218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 528.0
PJD2_k127_1828134_2 ABC-type multidrug transport system ATPase component K19340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 331.0
PJD2_k127_1828134_3 lipoprotein involved in nitrous oxide reduction K19342 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004161 255.0
PJD2_k127_1828134_4 lipoprotein involved in nitrous oxide reduction K19342 - - 0.0000000000000000000000000000493 121.0
PJD2_k127_1828134_5 nitrous oxide K19341 - - 0.000000000000000002679 87.0
PJD2_k127_1828445_0 PFAM Peptidase M16 inactive domain K07263 - - 0.0 1169.0
PJD2_k127_1830481_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 483.0
PJD2_k127_1847571_0 DNA helicase K03657 - 3.6.4.12 0.0 1070.0
PJD2_k127_1847571_1 Asparaginase, N-terminal K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002813 275.0
PJD2_k127_1847571_2 Helix-turn-helix domain - - - 0.00000000000892 73.0
PJD2_k127_1858356_0 GH3 auxin-responsive promoter - - - 1.182e-260 810.0
PJD2_k127_1858356_1 Lysine exporter protein (Lyse ygga) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001359 256.0
PJD2_k127_1858356_2 Glycosyltransferase, group 2 family protein K07011 - - 0.000000002028 63.0
PJD2_k127_186381_0 SNF2 family N-terminal domain K08282 - 2.7.11.1 4.776e-242 761.0
PJD2_k127_1866062_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1266.0
PJD2_k127_1866062_1 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000005965 192.0
PJD2_k127_1867953_0 Deoxyhypusine synthase K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 518.0
PJD2_k127_1867953_1 peptidase - - - 0.0000000000000000000000000000000000000000000000000000001786 196.0
PJD2_k127_1875067_0 Asparaginase K13051 - 3.4.19.5 0.00000000000000000000000000000000000000000000000000000000000000000000000007542 251.0
PJD2_k127_1875067_1 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.000000000000000000000000000000000000000000000000000000000000007006 223.0
PJD2_k127_1875067_2 Protein involved in cellulose biosynthesis - - - 0.00000000000000000000000000000002674 128.0
PJD2_k127_187922_0 Rhs element Vgr protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 317.0
PJD2_k127_187922_1 homolog of phage Mu protein gp47 - - - 0.00000000000000000000000000000000000000000000000002128 197.0
PJD2_k127_187922_2 PAAR repeat-containing protein - - - 0.000000000000000000000000000000000000002586 147.0
PJD2_k127_187922_3 Phage baseplate assembly protein W K06903 - - 0.000000000000000000000000000000000004593 141.0
PJD2_k127_1882840_0 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 405.0
PJD2_k127_1882840_1 Nlp p60 protein K13694,K13695 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000003025 196.0
PJD2_k127_1883261_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 1.137e-213 673.0
PJD2_k127_1883744_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1360.0
PJD2_k127_1883744_1 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 441.0
PJD2_k127_1884419_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 402.0
PJD2_k127_1884419_1 oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 388.0
PJD2_k127_1884419_2 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000003735 233.0
PJD2_k127_1884419_3 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000001384 186.0
PJD2_k127_1884419_4 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.0000000000000000000000000000000000000000000000000002241 188.0
PJD2_k127_1888809_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 440.0
PJD2_k127_1888809_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 342.0
PJD2_k127_1888809_2 YhhN family - - - 0.0000000000000000000000000000000000000000004881 166.0
PJD2_k127_1893477_0 COGs COG0737 5'-nucleotidase 2' 3'-cyclic phosphodiesterase and related esterase K01081,K11751 - 3.1.3.5,3.6.1.45 1.754e-279 863.0
PJD2_k127_1893477_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 7.588e-254 786.0
PJD2_k127_1893477_2 Permease, YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000006772 234.0
PJD2_k127_1899434_0 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 475.0
PJD2_k127_1899434_1 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004604 270.0
PJD2_k127_1899434_2 DNA mismatch repair protein MutT K07098 - - 0.0000000000000000000000008327 107.0
PJD2_k127_1908876_0 COGs COG4995 conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 518.0
PJD2_k127_1911816_0 COG1705 Muramidase (flagellum-specific) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 312.0
PJD2_k127_1911816_1 O-methyltransferase K00588 - 2.1.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000002043 247.0
PJD2_k127_1919903_0 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 2.194e-294 919.0
PJD2_k127_1919903_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 442.0
PJD2_k127_1919903_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 366.0
PJD2_k127_1919903_3 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000002967 231.0
PJD2_k127_1919903_4 - - - - 0.000000000000000000000000000000000006008 138.0
PJD2_k127_1924593_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 410.0
PJD2_k127_1924593_1 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000000000002141 208.0
PJD2_k127_1929834_0 TamB, inner membrane protein subunit of TAM complex - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008284 302.0
PJD2_k127_1931327_0 COG1233 Phytoene dehydrogenase and related K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 2.055e-205 650.0
PJD2_k127_1931327_1 Squalene phytoene synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 389.0
PJD2_k127_1931327_2 TIGRFAM isopentenyl-diphosphate delta-isomerase, type 1 K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000000000000000000349 214.0
PJD2_k127_1931327_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000003451 162.0
PJD2_k127_1931327_4 Fatty acid hydroxylase K15746 - 1.14.15.24 0.000000000000000000000274 96.0
PJD2_k127_194257_0 Uroporphyrin-iii c tetrapyrrole (Corrin porphyrin) methyltransferase K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579 316.0
PJD2_k127_194257_1 Etoposide-induced protein 2.4 (EI24) K06203 - - 0.00000000000000000003645 91.0
PJD2_k127_194257_2 - - - - 0.0000000000000000003916 87.0
PJD2_k127_1956400_0 OstA-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 427.0
PJD2_k127_1956400_1 COG1055 Na H antiporter NhaD and related arsenite - - - 0.00000000000000000000000000000000000000000000000005426 180.0
PJD2_k127_1956883_0 TamB, inner membrane protein subunit of TAM complex - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008955 385.0
PJD2_k127_1967610_0 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005861 271.0
PJD2_k127_1967610_1 Lipopolysaccharide-assembly, LptC-related - - - 0.0000000000000000000000000002395 118.0
PJD2_k127_1968992_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 1.87e-312 962.0
PJD2_k127_197313_0 P-loop ATPase protein family - - - 8.979e-233 728.0
PJD2_k127_197313_1 B12 binding domain K11942 - 5.4.99.13 0.00000000000000000000000000000000001265 137.0
PJD2_k127_197313_2 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) - - - 0.00000000000000000000000002631 108.0
PJD2_k127_1983173_0 Ion transport protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 369.0
PJD2_k127_1983173_1 Glucose / Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006234 267.0
PJD2_k127_1983173_2 Tricorn protease C1 domain - - - 0.000000000000000000000000000000000000000005701 156.0
PJD2_k127_1990104_0 Bacterial PH domain K08981 - - 0.000000000000000000000000000000000000000000000000000000000000000001269 240.0
PJD2_k127_1990104_1 Bacterial PH domain K09167 - - 0.000001105 51.0
PJD2_k127_1991033_0 Papain family cysteine protease - - - 0.00000000000000000000000000000000000000000001627 166.0
PJD2_k127_1991033_1 - - - - 0.0001251 53.0
PJD2_k127_200131_0 peptidase M24 K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 289.0
PJD2_k127_200131_1 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005548 253.0
PJD2_k127_200131_2 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000001972 172.0
PJD2_k127_200131_4 PD-(D/E)XK nuclease superfamily - - - 0.0001614 44.0
PJD2_k127_20043_0 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000001393 170.0
PJD2_k127_201552_0 PFAM Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008248 406.0
PJD2_k127_201552_1 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004434 250.0
PJD2_k127_201552_2 cellular response to DNA damage stimulus K07340 - - 0.0000000000000000000000000000000000000000005867 161.0
PJD2_k127_201552_3 PFAM Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000001261 58.0
PJD2_k127_2028020_0 PFAM Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001 261.0
PJD2_k127_2028020_1 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007982 254.0
PJD2_k127_2028020_2 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000000000000000000000000000002126 196.0
PJD2_k127_2040654_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 510.0
PJD2_k127_2040654_1 Belongs to the SEDS family K03588 - - 0.00000000000000000000000214 104.0
PJD2_k127_2075878_0 PKD domain containing protein - - - 1.428e-202 647.0
PJD2_k127_2075878_1 Belongs to the UPF0145 family - - - 0.000000000000000000000000000000000000699 140.0
PJD2_k127_2089221_0 amidohydrolase - - - 7.365e-201 631.0
PJD2_k127_2089221_1 Sporulation related domain - - - 0.00000000000000000000000000000000000000000008038 164.0
PJD2_k127_2089221_2 Belongs to the aldehyde dehydrogenase family K22187 - - 0.00000000000001198 75.0
PJD2_k127_2090369_0 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 309.0
PJD2_k127_2090369_1 SPTR Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000195 131.0
PJD2_k127_2097885_0 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 400.0
PJD2_k127_211194_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 1.625e-228 712.0
PJD2_k127_211194_1 heme binding K03046,K08642 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004222 351.0
PJD2_k127_2118982_0 Multidrug transporter MatE K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 475.0
PJD2_k127_2118982_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004744 366.0
PJD2_k127_2118982_2 L,D-transpeptidase catalytic domain - - - 0.0000000000002309 71.0
PJD2_k127_2133449_0 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 451.0
PJD2_k127_2133449_1 - - - - 0.0000000000000000000000000000000000000000000000000006612 187.0
PJD2_k127_2144449_0 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 562.0
PJD2_k127_2144449_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000006602 140.0
PJD2_k127_2144449_2 Metallo-peptidase family M12 - - - 0.0000000000000000002424 91.0
PJD2_k127_2168495_0 Pfam SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 537.0
PJD2_k127_2168495_1 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003147 454.0
PJD2_k127_2168495_2 PFAM LysE type translocator - - - 0.0000000000000000000008417 96.0
PJD2_k127_2184288_0 signal transduction protein with a C-terminal ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000117 194.0
PJD2_k127_2184288_1 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000001073 135.0
PJD2_k127_2192034_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 434.0
PJD2_k127_2192034_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009008 425.0
PJD2_k127_2192034_2 Dahp synthetase i kdsa K04516 - 5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 309.0
PJD2_k127_2194775_0 PFAM Tetratricopeptide - - - 1.001e-261 826.0
PJD2_k127_2222671_0 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000004898 233.0
PJD2_k127_2222671_1 cellulase activity - - - 0.000000002209 70.0
PJD2_k127_2223188_0 hemolysin activation secretion protein - - - 5.113e-236 741.0
PJD2_k127_2223188_1 beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 302.0
PJD2_k127_2224103_0 SdiA-regulated - - - 0.000000000000000000000000000000000000000000008512 173.0
PJD2_k127_2224103_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000002057 81.0
PJD2_k127_2227835_0 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000353 204.0
PJD2_k127_2227835_1 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000006411 199.0
PJD2_k127_2229002_0 2-methylthioadenine synthetase K18707 - 2.8.4.5 1.028e-217 680.0
PJD2_k127_2229002_1 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005062 272.0
PJD2_k127_2229002_2 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000549 217.0
PJD2_k127_2229002_3 Domain of unknown function (DUF4258) - - - 0.000000000000000000000000121 110.0
PJD2_k127_2239211_0 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000000000000000000000132 231.0
PJD2_k127_2239211_1 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000009005 81.0
PJD2_k127_2239211_2 Fibronectin type 3 domain K21571 - - 0.0000000005633 67.0
PJD2_k127_224680_0 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 423.0
PJD2_k127_224680_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006496 305.0
PJD2_k127_224680_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000009323 191.0
PJD2_k127_224680_3 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.00000000000000002882 81.0
PJD2_k127_2253748_0 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 542.0
PJD2_k127_2253748_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 372.0
PJD2_k127_2253748_2 deoxynucleoside kinase - - - 0.000000000000000000000000000000003199 129.0
PJD2_k127_2253748_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000006985 116.0
PJD2_k127_2253748_4 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000006486 87.0
PJD2_k127_2255439_0 Prolyl oligopeptidase family - - - 1.03e-306 948.0
PJD2_k127_2255439_1 sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003991 264.0
PJD2_k127_2265343_0 Phosphate starvation-inducible protein PhoH K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 548.0
PJD2_k127_2265343_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 469.0
PJD2_k127_2265343_2 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 450.0
PJD2_k127_2265343_3 PFAM TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003495 221.0
PJD2_k127_2269986_0 acyl-CoA reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 432.0
PJD2_k127_2269986_1 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003347 231.0
PJD2_k127_2269986_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000008862 123.0
PJD2_k127_227379_0 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 371.0
PJD2_k127_227379_1 - - - - 0.00000000000000000000000000001643 127.0
PJD2_k127_227379_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000005831 69.0
PJD2_k127_2310391_0 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 295.0
PJD2_k127_2310391_1 TIGRFAM methylmalonate-semialdehyde dehydrogenase K00140,K22187 - 1.2.1.18,1.2.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007053 281.0
PJD2_k127_2312175_0 GAF domain-containing protein K08968 - 1.8.4.14 0.000000000000000002124 87.0
PJD2_k127_2312175_1 Beta-galactosidase - - - 0.00000005133 63.0
PJD2_k127_232270_0 Belongs to the ComB family K05979 - 3.1.3.71 0.000000000000000000000000000000000000000000000000000000000000001193 222.0
PJD2_k127_232270_1 Cell division protein - - - 0.000000000000000000000000000000000000000000000000000000000001405 212.0
PJD2_k127_232270_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000003 87.0
PJD2_k127_2326758_0 SNF2 family N-terminal domain K08282 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 312.0
PJD2_k127_2326758_1 Transposase IS200 like - - - 0.00000000000000000000000000000000000000000000001895 177.0
PJD2_k127_2326758_2 Belongs to the ComB family K05979 - 3.1.3.71 0.00000000000000000000000000000000000001568 145.0
PJD2_k127_232893_0 TonB dependent receptor K16091 - - 6.295e-223 697.0
PJD2_k127_233564_0 TIGRFAM hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000001477 218.0
PJD2_k127_233564_1 Raf kinase inhibitor-like protein K06910 - - 0.00000000000000000000000000000000000000000000000000001873 192.0
PJD2_k127_233564_2 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000007545 60.0
PJD2_k127_233564_3 - - - - 0.00000005617 56.0
PJD2_k127_2349015_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269 488.0
PJD2_k127_2349608_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335,K18331 - 1.12.1.3,1.6.5.3 1.612e-226 704.0
PJD2_k127_2349608_1 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 3.396e-201 630.0
PJD2_k127_2349608_2 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 575.0
PJD2_k127_2349608_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000064 539.0
PJD2_k127_2349608_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 306.0
PJD2_k127_2349608_5 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000001225 239.0
PJD2_k127_2349608_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000000000001686 175.0
PJD2_k127_2349608_7 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000001002 145.0
PJD2_k127_2353564_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004636 295.0
PJD2_k127_2353564_1 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000003721 207.0
PJD2_k127_2354861_0 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 529.0
PJD2_k127_2354861_1 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 531.0
PJD2_k127_2354861_2 dTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 332.0
PJD2_k127_2354861_3 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000000000008016 218.0
PJD2_k127_2354861_4 serine-type exopeptidase activity K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 0.00001098 48.0
PJD2_k127_2361492_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000524 174.0
PJD2_k127_2361492_1 - - - - 0.00000000000000000000000000000000000001896 149.0
PJD2_k127_2361492_2 domain, Protein - - - 0.000000000000000646 90.0
PJD2_k127_2361492_3 - - - - 0.0000000004444 65.0
PJD2_k127_2367842_0 OPT oligopeptide transporter protein - - - 4.023e-281 873.0
PJD2_k127_2367842_1 POT family K03305 - - 0.00000000000000000000000000000000000000000000000000000001116 199.0
PJD2_k127_2367923_0 Major Facilitator K16211 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000736 572.0
PJD2_k127_2367923_1 Belongs to the glycosyl hydrolase 13 family K21575 GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016798,GO:0031216,GO:0044464,GO:0071944 3.2.1.135 0.0000000000000000001551 91.0
PJD2_k127_237363_0 Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001839 267.0
PJD2_k127_2381622_0 PFAM tRNA synthetases class I (E and Q), catalytic domain K01886 - 6.1.1.18 4.621e-200 627.0
PJD2_k127_2381622_1 peptidase activity, acting on L-amino acid peptides K01337,K13735,K20276 - 3.4.21.50 0.00000000005278 66.0
PJD2_k127_2387820_0 Peptidase M16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 385.0
PJD2_k127_2387820_1 Peptidase M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 306.0
PJD2_k127_2402008_0 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000246 166.0
PJD2_k127_2402008_1 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000001057 154.0
PJD2_k127_2402008_2 GH3 auxin-responsive promoter - - - 0.00000000000000000000000000000000000000005356 154.0
PJD2_k127_2405650_0 Heavy-metal-associated domain - - - 0.00000000000000000000000000000000000000000004584 166.0
PJD2_k127_2405650_1 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000009046 146.0
PJD2_k127_2405650_2 Heavy-metal-associated domain K08364 - - 0.00000000000000000000004314 105.0
PJD2_k127_2419782_0 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 9.818e-280 864.0
PJD2_k127_2419782_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 436.0
PJD2_k127_2434121_0 COGs COG0389 Nucleotidyltransferase DNA polymerase involved in DNA repair K03502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 357.0
PJD2_k127_2452412_0 Oligoendopeptidase F K08602 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 482.0
PJD2_k127_2452412_1 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000295 143.0
PJD2_k127_2471078_0 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000001768 193.0
PJD2_k127_2471078_1 Predicted periplasmic lipoprotein (DUF2279) - - - 0.000000000000000000000000000000000000000000392 160.0
PJD2_k127_2471078_2 Fe-S oxidoreductase - - - 0.000000000000000001085 87.0
PJD2_k127_2478594_0 CHAD domain - - - 0.0000000000000000000000000008157 124.0
PJD2_k127_2478594_1 PFAM Uncharacterised protein family UPF0029, Impact, N-terminal - - - 0.000000000000006982 76.0
PJD2_k127_2478594_2 Domain of unknown function (DU1801) - - - 0.0000000000001321 70.0
PJD2_k127_248812_0 Serine dehydratase K01752 - 4.3.1.17 1.104e-230 722.0
PJD2_k127_248812_1 phosphorylase K00757 - 2.4.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 476.0
PJD2_k127_248812_3 Peptidyl-prolyl cis-trans K03772 - 5.2.1.8 0.000000000000000000000000000002815 125.0
PJD2_k127_2488962_0 - - - - 0.00008546 51.0
PJD2_k127_2493973_0 aldehyde oxidase and xanthine dehydrogenase a b hammerhead K13482 - 1.17.1.4 2.071e-215 676.0
PJD2_k127_2493973_1 Xanthine and CO dehydrogenase maturation factor XdhC CoxF family-like protein K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008796 378.0
PJD2_k127_2493973_2 peptidase M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000005207 224.0
PJD2_k127_2493973_3 Cupin domain - - - 0.0000000000000000000000000000000000000000001804 161.0
PJD2_k127_2493973_4 TIGRFAM Nicotinamide mononucleotide transporter PnuC K03811 - - 0.00000000001409 65.0
PJD2_k127_2494976_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 556.0
PJD2_k127_2494976_1 transporter - - - 0.000000000000000000000000000000000000000000392 160.0
PJD2_k127_2504667_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 587.0
PJD2_k127_2504667_1 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016049,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030154,GO:0030312,GO:0030313,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003565 376.0
PJD2_k127_2511458_2 amidohydrolase - - - 0.0007058 43.0
PJD2_k127_2512772_0 COG2373 Large extracellular alpha-helical protein - - - 0.000000000000000000000000000007962 122.0
PJD2_k127_2512772_2 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00001723 51.0
PJD2_k127_2515310_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 562.0
PJD2_k127_2515310_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005362 462.0
PJD2_k127_2515310_2 COGs COG0663 Carbonic anhydrase acetyltransferase isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001105 279.0
PJD2_k127_253295_0 PFAM peptidase T2 asparaginase 2 K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 437.0
PJD2_k127_253295_1 Participates in the control of copper homeostasis K06201 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009526 273.0
PJD2_k127_2539106_0 Histidine ammonia-lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000003194 231.0
PJD2_k127_2539106_1 Purine-nucleoside phosphorylase K03784 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000003747 206.0
PJD2_k127_2540843_0 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 549.0
PJD2_k127_2540843_1 esterase K01070 - 3.1.2.12 0.00000000000000000000000000000000000000000002597 165.0
PJD2_k127_254382_0 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 593.0
PJD2_k127_254382_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000006427 201.0
PJD2_k127_2544053_0 PFAM pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000004044 218.0
PJD2_k127_2544053_1 Lamin Tail Domain - - - 0.000000000000000000000000000000000000000000000000000000001496 206.0
PJD2_k127_2544053_2 gas vesicle protein - - - 0.0000000000000008029 79.0
PJD2_k127_2555125_0 - - - - 0.0000000000000000000000002512 111.0
PJD2_k127_2555125_1 glucose-1-phosphate thymidylyltransferase - - - 0.0000000000001598 76.0
PJD2_k127_2556085_0 AsmA-like C-terminal region K07289 - - 0.000000000000000000000000000000000000000000609 166.0
PJD2_k127_2556085_1 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000000000000000000007559 103.0
PJD2_k127_2563462_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 1.954e-238 741.0
PJD2_k127_2563462_1 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000002697 226.0
PJD2_k127_2563462_2 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000000000000000001182 216.0
PJD2_k127_2581293_0 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 1.314e-200 632.0
PJD2_k127_2581293_1 ErfK YbiS YcfS YnhG family protein - - - 0.0000000000000000000000000000000000000000000000000006307 186.0
PJD2_k127_2581293_2 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000002786 91.0
PJD2_k127_2596667_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K00615 - 2.2.1.1 0.0 1170.0
PJD2_k127_2596667_1 Phenazine biosynthesis-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 322.0
PJD2_k127_2596667_2 Protein of unknown function, DUF393 - - - 0.00000000000000000000000000000000000000009053 155.0
PJD2_k127_259804_0 choline dehydrogenase activity - - - 1.228e-278 864.0
PJD2_k127_2602603_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003916 583.0
PJD2_k127_2608041_0 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 381.0
PJD2_k127_2608041_1 Dahp synthetase i kdsa K04516 - 5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000002836 237.0
PJD2_k127_2615528_0 Biotin-lipoyl like K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 497.0
PJD2_k127_2615528_1 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000099 477.0
PJD2_k127_2615528_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008726 253.0
PJD2_k127_2615681_0 Macrocin-O-methyltransferase (TylF) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001586 282.0
PJD2_k127_2615681_1 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000001141 199.0
PJD2_k127_2617061_0 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 3.901e-196 618.0
PJD2_k127_2617061_1 COGs COG0767 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007224 386.0
PJD2_k127_2622301_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000701 515.0
PJD2_k127_2622301_1 Alpha-2-macroglobulin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 509.0
PJD2_k127_2622301_2 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004154 383.0
PJD2_k127_2622301_3 Domain of unknown function (DUF4114) - - - 0.00000000004718 72.0
PJD2_k127_2623706_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 384.0
PJD2_k127_2623706_1 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000000000002274 200.0
PJD2_k127_2623706_2 - - - - 0.00000000000000000000000000002817 120.0
PJD2_k127_262925_0 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004021 369.0
PJD2_k127_262925_1 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000003459 160.0
PJD2_k127_2641085_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000379 240.0
PJD2_k127_2641085_1 Glycosyl hydrolases family 16 - - - 0.000000009802 61.0
PJD2_k127_2657196_0 Rhs element Vgr protein - - - 0.000000000000000000000000000000000000000000000000000000000000000008851 230.0
PJD2_k127_2657196_1 LysM domain - - - 0.000000000000000000000000000000000000000000000000000144 193.0
PJD2_k127_2657196_2 T4-like virus tail tube protein gp19 - - - 0.0000000000000000004492 87.0
PJD2_k127_2657196_3 - - - - 0.0001109 46.0
PJD2_k127_265919_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 447.0
PJD2_k127_265919_1 Amidinotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 299.0
PJD2_k127_265919_2 - - - - 0.0000000000000000008751 100.0
PJD2_k127_2665092_0 - - - - 0.00000000000000000003869 98.0
PJD2_k127_2665092_1 TonB-dependent receptor - - - 0.000000000000005151 75.0
PJD2_k127_2665092_2 - - - - 0.0000000000001536 76.0
PJD2_k127_2665092_3 - - - - 0.000004518 54.0
PJD2_k127_2665956_0 Polyphosphate nucleotide phosphotransferase, PPK2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004982 353.0
PJD2_k127_2665956_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000002569 237.0
PJD2_k127_2665956_2 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000001549 70.0
PJD2_k127_2665956_3 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000004625 66.0
PJD2_k127_2667660_0 Oxidoreductase FAD-binding domain K02613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 409.0
PJD2_k127_2667660_1 PFAM pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008098 268.0
PJD2_k127_2667660_2 Transcriptional regulator, TetR family - - - 0.00000000000000000000000000000000000000000000000000000000000001308 221.0
PJD2_k127_2667660_3 Phenylacetate-CoA oxygenase, PaaG subunit K02609 - 1.14.13.149 0.0000000003234 61.0
PJD2_k127_2667660_4 - - - - 0.00000002596 62.0
PJD2_k127_2667660_5 Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 K02613 - - 0.00000009445 53.0
PJD2_k127_2668746_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007381 378.0
PJD2_k127_2668746_1 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.00000000000000000000000000000000000000000000000000005016 189.0
PJD2_k127_269746_0 COGs COG0491 Zn-dependent hydrolase including glyoxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 334.0
PJD2_k127_269746_1 Rhodanese Homology Domain - - - 0.00000000000000000000000004584 111.0
PJD2_k127_269746_2 Sulfurtransferase - - - 0.00001158 48.0
PJD2_k127_2700286_0 PFAM GIY-YIG catalytic domain K07461 - - 0.00000000000000000000002872 102.0
PJD2_k127_2722099_0 Peptidase family S58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 580.0
PJD2_k127_2722099_1 transcriptional regulator - - - 0.000001772 52.0
PJD2_k127_2724774_0 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000009301 261.0
PJD2_k127_2724774_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000001707 221.0
PJD2_k127_2724774_2 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family K02503 - - 0.000000000000000000000000000000000000000000000000000000002725 202.0
PJD2_k127_2724774_3 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000071 129.0
PJD2_k127_2724774_4 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000008522 78.0
PJD2_k127_2730086_0 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000000000000000000000000000000000000000000000000000000000004632 233.0
PJD2_k127_2730086_1 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.0000000000000000000000000000000000000128 146.0
PJD2_k127_2730086_2 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000006177 91.0
PJD2_k127_2746732_0 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007433 589.0
PJD2_k127_2746732_1 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 496.0
PJD2_k127_2746732_2 ABC transporter K06147 - - 0.00000000000000000000000000000000000000000000009612 170.0
PJD2_k127_275797_0 Saccharopine dehydrogenase K00290,K00293 - 1.5.1.10,1.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 334.0
PJD2_k127_275797_1 translation initiation factor activity K00694 - 2.4.1.12 0.000000000008688 76.0
PJD2_k127_2759709_0 Hep Hag repeat protein - - - 0.000006367 59.0
PJD2_k127_2759842_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 607.0
PJD2_k127_2759842_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000005819 203.0
PJD2_k127_2762123_0 Protein of unknown function (DUF3667) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000208 244.0
PJD2_k127_2762123_1 self proteolysis - - - 0.0000000000000000000000000000004201 130.0
PJD2_k127_2762123_2 Histidine kinase - - - 0.000000000000000000000000000004446 122.0
PJD2_k127_2762123_3 self proteolysis - - - 0.00002135 48.0
PJD2_k127_2771546_0 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006284 269.0
PJD2_k127_2771546_1 C-terminal domain of CHU protein family - - - 0.0000000265 61.0
PJD2_k127_2772094_0 COGs COG1914 Mn2 and Fe2 transporter of the NRAMP family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006635 414.0
PJD2_k127_2772094_1 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000002414 158.0
PJD2_k127_2775141_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.498e-243 757.0
PJD2_k127_2775141_1 - - - - 0.00000000000000000002984 92.0
PJD2_k127_2775141_2 Septum formation initiator - - - 0.000000000000000001618 88.0
PJD2_k127_2789542_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 1.745e-206 649.0
PJD2_k127_2789542_1 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001332 281.0
PJD2_k127_2789542_2 Permease, YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001092 249.0
PJD2_k127_2793467_0 Beta-lactamase class C and other penicillin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008957 440.0
PJD2_k127_2793467_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 415.0
PJD2_k127_2797119_0 ABC-type Na efflux pump, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 490.0
PJD2_k127_2797119_1 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 456.0
PJD2_k127_2800335_0 Metallo-beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 308.0
PJD2_k127_2800335_1 Belongs to the SEDS family K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000001377 222.0
PJD2_k127_2808602_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007414 590.0
PJD2_k127_2808602_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 388.0
PJD2_k127_2808602_2 Diacylglycerol kinase - - - 0.000000001858 61.0
PJD2_k127_281785_0 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 420.0
PJD2_k127_281785_1 Amino acid permease - - - 0.000000000000000000000000000003706 123.0
PJD2_k127_2820830_0 Elongator protein 3, MiaB family, Radical SAM - - - 4.998e-248 769.0
PJD2_k127_2820830_1 Belongs to the arginase family K01480 - 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 533.0
PJD2_k127_2820830_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 381.0
PJD2_k127_2820830_3 Fatty acid desaturase K00508 - 1.14.19.3 0.00000000000000000000000000000000000000000004217 161.0
PJD2_k127_2820830_5 CHRD domain - - - 0.0000000007242 66.0
PJD2_k127_2822209_0 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 486.0
PJD2_k127_2822209_1 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000001283 226.0
PJD2_k127_2828142_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000754 186.0
PJD2_k127_2828142_1 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000001156 178.0
PJD2_k127_2829496_0 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000003383 196.0
PJD2_k127_2829496_1 - - - - 0.00000000000000000000000000000000000000000000000000003658 190.0
PJD2_k127_2829496_2 Belongs to the MtfA family K09933 - - 0.000000000000000000000000000000000000000000000001084 184.0
PJD2_k127_2829786_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 539.0
PJD2_k127_2829786_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000000000138 201.0
PJD2_k127_2829786_2 lacI family - - - 0.00000000000000000000000000000000000000002582 154.0
PJD2_k127_2829786_3 Paraquat-inducible protein A K03808 - - 0.0000001779 59.0
PJD2_k127_2833074_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1156.0
PJD2_k127_2833074_1 Redoxin - - - 0.000000000000000000000000000000000137 137.0
PJD2_k127_2847749_0 PFAM fumarylacetoacetate (FAA) hydrolase K16171 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009023 549.0
PJD2_k127_2847749_1 flavin reductase - - - 0.0000000000000000000000000000000000000000000000000000000000002534 213.0
PJD2_k127_2847749_2 polysaccharide deacetylase K01179 - 3.2.1.4 0.00000000000000000004362 93.0
PJD2_k127_2849417_0 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007234 327.0
PJD2_k127_2849417_1 GSCFA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 302.0
PJD2_k127_2849417_2 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P) K00849 GO:0005975,GO:0005996,GO:0006012,GO:0008150,GO:0008152,GO:0019318,GO:0044238,GO:0044281,GO:0071704 2.7.1.6 0.000000000008746 65.0
PJD2_k127_2860420_0 Outer membrane protein beta-barrel family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 547.0
PJD2_k127_2861003_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006515 530.0
PJD2_k127_2861003_1 Putative esterase - - - 0.0000000000000000000000000000000004341 132.0
PJD2_k127_2861033_0 Bacterial regulatory proteins, deoR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 388.0
PJD2_k127_2861033_2 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000001218 108.0
PJD2_k127_2863864_0 - - - - 0.000000000000000000000002357 115.0
PJD2_k127_2863864_1 - - - - 0.00000000000000006696 85.0
PJD2_k127_2864334_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 7.511e-258 809.0
PJD2_k127_2864334_1 ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000005407 227.0
PJD2_k127_2868742_0 Sortilin, neurotensin receptor 3, - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 426.0
PJD2_k127_2868742_1 Peptidase S46 - - - 0.000000000000000000004 97.0
PJD2_k127_28717_0 Cys/Met metabolism PLP-dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 582.0
PJD2_k127_28717_1 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 511.0
PJD2_k127_28717_2 outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005932 281.0
PJD2_k127_2875057_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 1.186e-276 860.0
PJD2_k127_2875057_1 Peptidase M14, carboxypeptidase A - - - 7.111e-251 786.0
PJD2_k127_2875057_2 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000000003713 116.0
PJD2_k127_2884320_0 Phage integrase, N-terminal SAM-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 449.0
PJD2_k127_2884320_1 PFAM TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 377.0
PJD2_k127_2884320_2 Single-stranded DNA-binding protein K03111 - - 0.000000000000000000000000000000000002254 141.0
PJD2_k127_2892185_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006875 329.0
PJD2_k127_2892185_1 Thiazole biosynthesis protein ThiG K02371 - 1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 307.0
PJD2_k127_2894267_0 C-terminal region of band_7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 373.0
PJD2_k127_2894267_1 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.000000000000000000000000000000000001081 143.0
PJD2_k127_2911038_0 Belongs to the GPI family K01810 - 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 552.0
PJD2_k127_2911038_1 Threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 299.0
PJD2_k127_291113_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1101.0
PJD2_k127_2911318_1 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.0000000000000000000000000000000000000002843 153.0
PJD2_k127_2911972_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 383.0
PJD2_k127_2911972_1 S-adenosyl-l-methionine hydroxide adenosyltransferase - - - 0.0000000000000000000000000000000000000000000000005761 176.0
PJD2_k127_2911972_2 PFAM Cold-shock protein, DNA-binding - - - 0.000000000000000000000000000000000000000001327 162.0
PJD2_k127_2911972_3 RNA recognition motif - - - 0.00000000000000000000002488 101.0
PJD2_k127_2912306_0 Aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004421 419.0
PJD2_k127_2912306_1 Protein of unknown function (DUF3365) - - - 0.00000000000000000000265 97.0
PJD2_k127_291381_0 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008655 278.0
PJD2_k127_291381_1 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000001513 153.0
PJD2_k127_2942930_0 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003082 271.0
PJD2_k127_2942930_1 chlorophyll binding - - - 0.000000000000000000000014 111.0
PJD2_k127_2944661_0 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005856 394.0
PJD2_k127_2961911_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000448 264.0
PJD2_k127_2961911_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000006942 190.0
PJD2_k127_296391_0 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II K01835 - 5.4.2.2 4.228e-214 671.0
PJD2_k127_2968771_0 Fatty acid hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 382.0
PJD2_k127_2968771_1 - - - - 0.0002654 48.0
PJD2_k127_2975820_0 ATP-grasp in the biosynthetic pathway with Ter operon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 292.0
PJD2_k127_2975820_1 TraB family K09973 - - 0.000000000000000000000000000000000000000000000000000000000000000008433 235.0
PJD2_k127_2982971_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 391.0
PJD2_k127_2982971_1 TIGRFAM Nicotinamide mononucleotide transporter PnuC K03811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003429 280.0
PJD2_k127_2982971_2 ATPase kinase involved in NAD metabolism - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006773 248.0
PJD2_k127_2991564_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 427.0
PJD2_k127_2991564_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007532 330.0
PJD2_k127_2991564_2 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000007259 89.0
PJD2_k127_2996443_0 Metal-dependent hydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006276 445.0
PJD2_k127_2996443_1 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000009143 80.0
PJD2_k127_2998751_0 Motility related/secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 302.0
PJD2_k127_3005857_0 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 468.0
PJD2_k127_3005857_1 alanine dehydrogenase K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006586 320.0
PJD2_k127_3005857_2 ABC transporter K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000002806 211.0
PJD2_k127_3005857_3 transcriptional regulator (AraC family) - - - 0.0000001536 53.0
PJD2_k127_3023185_0 PKD domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001322 273.0
PJD2_k127_3025873_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000615 152.0
PJD2_k127_3025873_1 phosphorelay signal transduction system - - - 0.00000000000000000000000000007657 118.0
PJD2_k127_3025873_2 PAS domain - - - 0.000000000000000000000001009 106.0
PJD2_k127_3025873_3 GGDEF domain K21025 - - 0.000000000000000001547 87.0
PJD2_k127_303876_0 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002633 271.0
PJD2_k127_303876_1 methyltransferase - - - 0.00000000000000005882 89.0
PJD2_k127_303876_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000009198 85.0
PJD2_k127_3044176_0 TonB dependent receptor K16089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 451.0
PJD2_k127_3044176_1 HmuY protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006543 284.0
PJD2_k127_305018_0 PFAM Beta-propeller repeat - - - 0.00000000000000000000000000000000000005266 155.0
PJD2_k127_3067203_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 368.0
PJD2_k127_3067203_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 332.0
PJD2_k127_307356_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 325.0
PJD2_k127_307356_1 TonB dependent receptor K16087 - - 0.0000000000000000000000000000000000000000000000000000000000000003707 226.0
PJD2_k127_307356_2 Haem-binding domain - - - 0.0000000000000000000000000000000000000000000000000001299 190.0
PJD2_k127_3077650_0 Belongs to the UPF0312 family - - - 0.00002552 51.0
PJD2_k127_3077650_1 tRNA_anti-like - - - 0.00007396 53.0
PJD2_k127_3104321_0 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006984 249.0
PJD2_k127_3108018_0 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 393.0
PJD2_k127_3108018_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000005806 130.0
PJD2_k127_313083_0 Sigma-54 interaction domain K03405 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 560.0
PJD2_k127_313083_1 - - - - 0.00000000000000000000000000000000368 134.0
PJD2_k127_3138188_0 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 341.0
PJD2_k127_3138188_1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001351 267.0
PJD2_k127_3138473_0 protein CHP03519, membrane, Bacteroidetes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 384.0
PJD2_k127_3138473_1 PFAM PKD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000009871 235.0
PJD2_k127_3138473_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000008277 187.0
PJD2_k127_3138473_3 Catalase K03781 - 1.11.1.6 0.000000000000000001767 86.0
PJD2_k127_3142759_0 COG4464 Capsular polysaccharide biosynthesis protein K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000009681 267.0
PJD2_k127_3142759_1 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008307 248.0
PJD2_k127_3142759_2 Transposase IS200 like - - - 0.00000000000001583 73.0
PJD2_k127_3142759_3 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000002871 70.0
PJD2_k127_3142759_4 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000009271 69.0
PJD2_k127_314666_0 FAD-dependent dehydrogenase K07137 - - 0.00000000000000000000000000000000000000000000000000000000000000000008488 234.0
PJD2_k127_314666_1 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000155 219.0
PJD2_k127_314666_2 5'-nucleotidase K01081 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000006348 207.0
PJD2_k127_314666_3 FAD-dependent dehydrogenase K07137 - - 0.0000000000000002523 79.0
PJD2_k127_3146752_0 glucose-1-phosphate adenylyltransferase K00975 - 2.7.7.27 2.221e-208 655.0
PJD2_k127_3146752_1 Major Facilitator K16211 - - 0.00000000000000000000000000000000000000000000000000000000009405 204.0
PJD2_k127_3146752_2 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000001626 110.0
PJD2_k127_3201852_0 Oligoendopeptidase F K08602 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 391.0
PJD2_k127_3201852_1 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000000000000001182 221.0
PJD2_k127_3201852_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000009029 218.0
PJD2_k127_3201852_3 Domain of unknown function (DUF4287) - - - 0.00000000000000000000000000000000000000000000000000000002076 201.0
PJD2_k127_3201852_4 Glyoxalase-like domain K06996 - - 0.0000000000000000000000000000000000000002485 153.0
PJD2_k127_3201852_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000005167 120.0
PJD2_k127_3203355_0 fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 505.0
PJD2_k127_3203355_1 catechol 1,2-dioxygenase K03381 - 1.13.11.1 0.0008554 47.0
PJD2_k127_3204060_0 PFAM YicC-like family, N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 436.0
PJD2_k127_3204060_1 glucosamine N-acyltransferase K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 401.0
PJD2_k127_3204060_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000004178 230.0
PJD2_k127_3204060_3 GldH lipoprotein - GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000003847 160.0
PJD2_k127_3224884_0 Pkd domain containing protein - - - 0.000000000000000000000000000000000000002217 162.0
PJD2_k127_3228065_0 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000001643 214.0
PJD2_k127_3228065_1 Gaf domain - - - 0.000000000000000000000000000000000000000000000000000000001078 216.0
PJD2_k127_3228065_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000008785 101.0
PJD2_k127_3228986_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 1.736e-245 766.0
PJD2_k127_3229301_0 Carbohydrate family 9 binding domain-like - - - 2.569e-209 668.0
PJD2_k127_3229301_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 408.0
PJD2_k127_3229301_2 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 381.0
PJD2_k127_3229301_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000007955 182.0
PJD2_k127_3233968_0 COG0308 Aminopeptidase N - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 500.0
PJD2_k127_3258136_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 541.0
PJD2_k127_3258136_1 Dodecin K09165 - - 0.000000000000000000000000001466 112.0
PJD2_k127_3258136_3 Two component transcriptional regulator, LytTR family K02477 - - 0.0000000000000000009006 88.0
PJD2_k127_3264901_0 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762,K13421 - 2.4.2.10,4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005407 310.0
PJD2_k127_3264901_1 Belongs to the Nudix hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000008681 236.0
PJD2_k127_3264901_2 protein possibly involved in aromatic compounds catabolism K19222 - 3.1.2.28 0.000000000000000000000000000000000000000000000000004433 183.0
PJD2_k127_3265075_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 7.643e-215 674.0
PJD2_k127_3267910_0 Heat shock protein Hsp90 K04079 - - 9.884e-305 944.0
PJD2_k127_3267910_1 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 409.0
PJD2_k127_3267910_2 NTPase K06928 - 3.6.1.15 0.000000000000000000002998 104.0
PJD2_k127_3278769_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 410.0
PJD2_k127_3278769_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000007086 263.0
PJD2_k127_3287680_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 403.0
PJD2_k127_32912_0 protein conserved in bacteria (DUF2329) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 524.0
PJD2_k127_32912_1 protein conserved in bacteria (DUF2329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 406.0
PJD2_k127_3295238_0 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003205 320.0
PJD2_k127_3295238_1 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000004135 242.0
PJD2_k127_3295238_2 23S rRNA-intervening sequence protein - - - 0.000000001622 61.0
PJD2_k127_3326529_0 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000001262 236.0
PJD2_k127_3328262_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000006071 237.0
PJD2_k127_3328262_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family K07264 - 2.4.2.43 0.00000000000000000000000466 105.0
PJD2_k127_3330961_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 3.917e-284 883.0
PJD2_k127_3330961_1 Belongs to the GarS family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 469.0
PJD2_k127_3340460_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 535.0
PJD2_k127_3340460_1 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000077 230.0
PJD2_k127_3347752_0 Acetyltransferase (GNAT) domain K02348 - - 0.000000000000000000000000000000000000000000000000000000000003138 211.0
PJD2_k127_3347752_1 Peptidase, M28 - - - 0.000000000000000000000000000000000000000000004353 165.0
PJD2_k127_3347752_2 Outer membrane protein beta-barrel domain - - - 0.0000000000000001867 83.0
PJD2_k127_3348008_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 368.0
PJD2_k127_3348008_1 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 321.0
PJD2_k127_3350549_0 Domain of unknown function (DUF5103) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009404 382.0
PJD2_k127_3350549_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.0000000000005705 70.0
PJD2_k127_3351023_0 Bacterial membrane protein YfhO - - - 7.481e-242 769.0
PJD2_k127_3351023_1 Glycosyltransferase Family 4 - - - 0.0000000001188 66.0
PJD2_k127_3355956_0 PFAM Phosphoribosyl transferase domain K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000004237 252.0
PJD2_k127_3355956_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000002673 183.0
PJD2_k127_3356086_0 Aldehyde dehydrogenase family K10217 - 1.2.1.32,1.2.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 391.0
PJD2_k127_3356086_1 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000002643 239.0
PJD2_k127_3356086_2 Endoribonuclease L-PSP K15067 - 3.5.99.5 0.00000000000000000000000000000000000000000000000000000003232 199.0
PJD2_k127_335846_0 CHAT domain - - - 2.988e-218 698.0
PJD2_k127_335846_1 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000001526 231.0
PJD2_k127_3361728_0 Cytochrome C oxidase, cbb3-type, subunit III K19713 - 1.8.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 441.0
PJD2_k127_3361728_1 PFAM YeeE YedE family (DUF395) K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000181 282.0
PJD2_k127_3361728_2 COGs COG0737 5'-nucleotidase 2' 3'-cyclic phosphodiesterase and related esterase K01081,K11751 - 3.1.3.5,3.6.1.45 0.00000111 51.0
PJD2_k127_3363241_0 alpha beta K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 301.0
PJD2_k127_3363241_1 Acyl carrier protein phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000004188 228.0
PJD2_k127_3363241_2 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000001185 218.0
PJD2_k127_3363241_3 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000003962 203.0
PJD2_k127_3363241_4 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000007682 199.0
PJD2_k127_3363263_0 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 508.0
PJD2_k127_3363263_1 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001398 274.0
PJD2_k127_3363263_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005762 270.0
PJD2_k127_3363263_3 Peptidyl-prolyl cis-trans isomerase K01802,K03774,K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000001954 231.0
PJD2_k127_3363263_4 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.0000000000000000000000000000000000002777 141.0
PJD2_k127_3372844_0 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 333.0
PJD2_k127_3376718_0 Belongs to the glycosyl hydrolase 13 family K21575 - 3.2.1.135 0.000000000000000000000000000000000000000000000000000000000000000000000000000001601 267.0
PJD2_k127_3376718_1 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000008177 248.0
PJD2_k127_3376718_2 - - - - 0.000000000000000000000000000000000000000000000000000000000003139 215.0
PJD2_k127_3376718_3 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000001008 154.0
PJD2_k127_3383366_0 TonB-dependent receptor plug domain - - - 8e-244 783.0
PJD2_k127_3383366_1 Phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006891 299.0
PJD2_k127_339386_0 alcohol dehydrogenase K19714 - 1.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 491.0
PJD2_k127_339386_1 sterol desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 426.0
PJD2_k127_339386_2 Cytidylyltransferase K00979,K19714 - 1.1.3.48,2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 353.0
PJD2_k127_339386_3 membrane protein (DUF2306) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001702 235.0
PJD2_k127_339386_4 YARHG - - - 0.000000000000000000000000000000000000000000000000001817 192.0
PJD2_k127_339386_5 Putative prokaryotic signal transducing protein - - - 0.000000000000000002875 86.0
PJD2_k127_339974_0 AMP-dependent synthetase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 573.0
PJD2_k127_339974_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000009688 179.0
PJD2_k127_3402844_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 389.0
PJD2_k127_3420055_0 domain, Protein - - - 0.0000000000000008871 89.0
PJD2_k127_3420055_1 amine dehydrogenase activity - - - 0.00001123 50.0
PJD2_k127_3447567_0 PFAM Bacterial Fmu (Sun) eukaryotic nucleolar NOL1 Nop2p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 381.0
PJD2_k127_3447567_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000001232 94.0
PJD2_k127_3448473_0 Thymidylate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000002859 213.0
PJD2_k127_3448473_1 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000000000003875 183.0
PJD2_k127_3448473_2 transport, permease protein K01992 - - 0.0000000000000326 74.0
PJD2_k127_3456575_0 Nucleotidyl transferase K15669 - 2.7.7.71 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 349.0
PJD2_k127_3456575_1 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 291.0
PJD2_k127_3460649_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 523.0
PJD2_k127_3460649_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005655 383.0
PJD2_k127_3460649_2 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000002869 230.0
PJD2_k127_3460649_3 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000004486 190.0
PJD2_k127_3465851_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 443.0
PJD2_k127_3465851_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 441.0
PJD2_k127_3465851_10 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000007659 145.0
PJD2_k127_3465851_11 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000000000000000001718 95.0
PJD2_k127_3465851_12 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000006489 53.0
PJD2_k127_3465851_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 344.0
PJD2_k127_3465851_3 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001419 261.0
PJD2_k127_3465851_4 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000002041 236.0
PJD2_k127_3465851_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000003197 229.0
PJD2_k127_3465851_6 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000003993 201.0
PJD2_k127_3465851_7 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000001329 174.0
PJD2_k127_3465851_8 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000006983 154.0
PJD2_k127_3465851_9 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000002217 150.0
PJD2_k127_3484743_0 PFAM amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005065 609.0
PJD2_k127_3484743_1 - - - - 0.000000002118 62.0
PJD2_k127_3490645_0 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 533.0
PJD2_k127_3490645_1 Aminotransferase class-III K15372 - 2.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 424.0
PJD2_k127_3499428_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 423.0
PJD2_k127_3499428_1 unfolded protein binding K06142 - - 0.00000000000000015 82.0
PJD2_k127_350459_0 Dehydrogenase K00102,K00104 - 1.1.2.4,1.1.3.15 2.159e-215 676.0
PJD2_k127_3507875_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006757 374.0
PJD2_k127_3507875_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000005929 146.0
PJD2_k127_3507981_0 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 9.345e-208 653.0
PJD2_k127_3507981_1 PFAM Peptidase family M20 M25 M40 K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 497.0
PJD2_k127_3507981_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 349.0
PJD2_k127_3507981_3 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 321.0
PJD2_k127_3507981_4 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.000000000000000000000000000006069 119.0
PJD2_k127_350884_0 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016049,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030154,GO:0030312,GO:0030313,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007914 391.0
PJD2_k127_350884_1 - - - - 0.0000000000000001107 86.0
PJD2_k127_3513571_0 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000001741 149.0
PJD2_k127_3513571_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000002376 81.0
PJD2_k127_3516468_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007305 567.0
PJD2_k127_3516468_1 Domain of unknown function (DUF892) - - - 0.000000000000000000000000000000000000007235 152.0
PJD2_k127_3516468_2 - - - - 0.000601 43.0
PJD2_k127_3518573_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 409.0
PJD2_k127_3518573_1 COG2373 Large extracellular alpha-helical protein - - - 0.0000000000000000000000000008598 120.0
PJD2_k127_353640_0 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000001374 236.0
PJD2_k127_353640_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000004067 231.0
PJD2_k127_353640_2 acyl-CoA dehydrogenase - - - 0.00000000007609 63.0
PJD2_k127_3547499_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 390.0
PJD2_k127_3550561_0 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 546.0
PJD2_k127_3554886_0 TonB-dependent receptor K02014 - - 2.488e-208 668.0
PJD2_k127_3554886_1 TonB dependent receptor K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001282 278.0
PJD2_k127_3559238_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207 424.0
PJD2_k127_3559238_1 Protein of unknown function (DUF3810) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 376.0
PJD2_k127_3559238_2 Deoxycytidine triphosphate deaminase K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004666 349.0
PJD2_k127_3559238_3 acr, cog1399 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002816 276.0
PJD2_k127_3559238_4 D-alanyl-D-alanine carboxypeptidase - - - 0.0000000000000000000000000000000000000000001836 168.0
PJD2_k127_3559238_5 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000002229 108.0
PJD2_k127_3562331_0 TonB-dependent Receptor Plug Domain - - - 3.194e-195 627.0
PJD2_k127_3562331_1 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000004554 211.0
PJD2_k127_356306_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 547.0
PJD2_k127_356306_1 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000001347 218.0
PJD2_k127_35646_0 Glycosyl hydrolase family 20, domain 2 K12373 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 468.0
PJD2_k127_35654_0 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008991 347.0
PJD2_k127_35654_1 NlpC/P60 family - - - 0.0000000000000000000000000000000000000000000007385 172.0
PJD2_k127_3585518_0 ATPase (AAA - - - 2.977e-196 619.0
PJD2_k127_3585518_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006819 546.0
PJD2_k127_3594664_0 Outer membrane protein beta-barrel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 539.0
PJD2_k127_3594664_1 Glycine cleavage H-protein K02437 - - 0.00000000000000000000000000000000004438 137.0
PJD2_k127_3594664_2 Outer membrane protein beta-barrel family - - - 0.0000001111 55.0
PJD2_k127_3611959_0 COG2373 Large extracellular alpha-helical protein - - - 0.0 1330.0
PJD2_k127_3618236_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 547.0
PJD2_k127_3618236_1 N-acetylglucosamine kinase - - - 0.00000000000000000000000000000000000000000000000000000001301 202.0
PJD2_k127_3642055_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 430.0
PJD2_k127_3642055_1 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 370.0
PJD2_k127_3642055_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 329.0
PJD2_k127_3642055_3 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 305.0
PJD2_k127_3642055_4 HAD-hyrolase-like K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007542 302.0
PJD2_k127_3642055_5 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000003165 179.0
PJD2_k127_3664231_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 9.241e-207 650.0
PJD2_k127_366464_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 1.525e-226 706.0
PJD2_k127_366464_1 mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 546.0
PJD2_k127_366464_2 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 438.0
PJD2_k127_366464_3 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000697 347.0
PJD2_k127_366464_4 Endoribonuclease L-PSP - - - 0.00000000000000000000000000256 115.0
PJD2_k127_3664741_0 Belongs to the cysteine synthase cystathionine beta- synthase family K01697,K01738,K12339 - 2.5.1.47,4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 467.0
PJD2_k127_3664741_1 Glucose Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 344.0
PJD2_k127_3672946_0 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 437.0
PJD2_k127_3683095_0 transport system involved in gliding motility, auxiliary component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 321.0
PJD2_k127_3686594_0 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 387.0
PJD2_k127_3686594_1 Belongs to the SEDS family K05837 - - 0.0000000000000000000000000000000000000000000000003412 177.0
PJD2_k127_3688230_0 - - - - 0.00000000000000000000000000000000153 134.0
PJD2_k127_3688230_1 Endonuclease Exonuclease Phosphatase - - - 0.0000000000000000000001823 110.0
PJD2_k127_36996_0 CarboxypepD_reg-like domain - - - 2.045e-321 1002.0
PJD2_k127_36996_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 3.092e-231 724.0
PJD2_k127_36996_2 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000001429 225.0
PJD2_k127_36996_3 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000001197 169.0
PJD2_k127_36996_4 Inner membrane protein CreD K06143 - - 0.000000000000001267 79.0
PJD2_k127_36996_5 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.00005159 46.0
PJD2_k127_3716677_0 Isocitrate isopropylmalate dehydrogenase K00031,K00052 - 1.1.1.42,1.1.1.85 3.145e-194 608.0
PJD2_k127_3716677_1 protein affecting Mg2 Co2 transport K06195 - - 0.00000000000000007747 81.0
PJD2_k127_373197_0 PFAM Peptidase family M20 M25 M40 K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 402.0
PJD2_k127_373197_1 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000465 356.0
PJD2_k127_373197_2 PFAM polysaccharide biosynthesis protein K03328 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 344.0
PJD2_k127_373688_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266,K17722 - 1.3.1.1,1.4.1.13,1.4.1.14 1.641e-209 656.0
PJD2_k127_3742452_0 Carbohydrate family 9 binding domain-like - - - 3.649e-253 796.0
PJD2_k127_3742452_1 - - - - 0.000000005857 58.0
PJD2_k127_3742686_0 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000000000001748 193.0
PJD2_k127_3742686_1 Damage-inducible protein DinB - - - 0.00000000000000000000000000000000000000000000000004451 180.0
PJD2_k127_3753557_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.974e-304 939.0
PJD2_k127_3753557_1 - - - - 0.000000000000000000000000000000000000001053 151.0
PJD2_k127_3753557_2 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 0.00000000001628 65.0
PJD2_k127_3753557_3 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000209 54.0
PJD2_k127_3757195_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 545.0
PJD2_k127_3757195_1 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000002676 174.0
PJD2_k127_3757195_2 ATP-independent chaperone mediated protein folding - - - 0.00000000000000000002323 97.0
PJD2_k127_3757195_3 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.0000000000000000002448 89.0
PJD2_k127_3761728_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 519.0
PJD2_k127_3761728_1 PFAM PspC domain K03973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 329.0
PJD2_k127_377030_0 DoxX family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004031 410.0
PJD2_k127_377030_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005583 353.0
PJD2_k127_377030_2 Domain of Unknown Function (DUF1599) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000538 258.0
PJD2_k127_377030_3 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.00000000000000000000000000000003042 127.0
PJD2_k127_3771655_0 DNA photolyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 460.0
PJD2_k127_3771655_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 371.0
PJD2_k127_3771655_2 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.0000000000000001179 81.0
PJD2_k127_3782528_0 glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 396.0
PJD2_k127_3807345_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 354.0
PJD2_k127_3807345_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000001192 256.0
PJD2_k127_3807345_3 PKD domain containing protein - - - 0.000000000000000009884 83.0
PJD2_k127_3829909_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006083 463.0
PJD2_k127_3829909_1 Pkd domain containing protein - - - 0.00000002355 62.0
PJD2_k127_3835594_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005063 265.0
PJD2_k127_3835594_1 Acyl-coA-binding protein - - - 0.000000000000000000000000000005384 120.0
PJD2_k127_3835594_2 Glycosyltransferase Family 4 - - - 0.00008055 46.0
PJD2_k127_386855_0 Peptidase S16 lon domain protein K01338,K07157 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005137 300.0
PJD2_k127_386855_1 involved in cell wall biogenesis K12984 - - 0.0000000000000000000000000000000000000000000000000000000000008016 219.0
PJD2_k127_386945_0 PFAM AhpC TSA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008737 295.0
PJD2_k127_386945_1 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000001875 118.0
PJD2_k127_388522_0 Tetratricopeptide repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 363.0
PJD2_k127_3888791_0 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 601.0
PJD2_k127_3888791_1 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 295.0
PJD2_k127_3888791_2 2'-5' RNA ligase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000043 259.0
PJD2_k127_3888791_3 Belongs to the peptidase S24 family K03503 - - 0.00000002817 55.0
PJD2_k127_3903182_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 4.385e-218 682.0
PJD2_k127_3903182_1 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 1.275e-200 634.0
PJD2_k127_3903182_2 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000002378 243.0
PJD2_k127_3903182_3 Protein of unknown function (DUF1569) - - - 0.000000000000000000000000000000000000002175 152.0
PJD2_k127_390504_0 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000009887 252.0
PJD2_k127_390504_1 Putative FMN-binding domain K07734 - - 0.00000000000000000000000000000000000000000000000000000000003155 212.0
PJD2_k127_390504_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000292 177.0
PJD2_k127_3908361_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006417 575.0
PJD2_k127_3908361_1 Domain of unknown function (DUF4010) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 376.0
PJD2_k127_3908361_2 Sortilin, neurotensin receptor 3, - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005672 261.0
PJD2_k127_3916133_0 Peptidase family C25 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006918 409.0
PJD2_k127_3930806_0 PFAM TonB-dependent Receptor Plug K02014,K16089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 588.0
PJD2_k127_3930806_1 - - - - 0.000004704 52.0
PJD2_k127_3945881_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 1.385e-258 802.0
PJD2_k127_3945881_1 - - - - 0.000000000000000000000000000000000000000000000000002202 188.0
PJD2_k127_3946789_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005418 529.0
PJD2_k127_3946789_1 belongs to the carbohydrate kinase PfkB family K00917,K16370 - 2.7.1.11,2.7.1.144 0.000000000000000000000000000000000000000000000000000000000001614 213.0
PJD2_k127_3946789_2 Bacterial sugar transferase - - - 0.0000000000000000000000000002836 118.0
PJD2_k127_3946789_3 - - - - 0.000000001481 60.0
PJD2_k127_3947047_0 Bacterial extracellular solute-binding protein K10117 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 368.0
PJD2_k127_3947047_1 Binding-protein-dependent transport system inner membrane component K10118 - - 0.000000000000000000000000000000000000000000002876 167.0
PJD2_k127_3947587_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 416.0
PJD2_k127_3947587_1 Oxidoreductase FAD-binding domain K00523,K05784 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001044 254.0
PJD2_k127_3947587_2 Lipocalin-like domain K03098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002139 247.0
PJD2_k127_3951287_0 Pkd domain containing protein - - - 0.000000000000000000000000000000000006089 156.0
PJD2_k127_3964779_0 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 374.0
PJD2_k127_3964779_1 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 364.0
PJD2_k127_3964779_2 amidohydrolase - - - 0.00000003252 56.0
PJD2_k127_3967524_0 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 453.0
PJD2_k127_3967524_1 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 447.0
PJD2_k127_3967524_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000074 258.0
PJD2_k127_3967524_3 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001751 228.0
PJD2_k127_3967524_4 Colicin V production protein K03558 - - 0.0000000000000000000000000000000000000000000002172 173.0
PJD2_k127_3967524_5 PFAM Yqey-like protein K09117 - - 0.00000000000000000000000000000000003023 136.0
PJD2_k127_3971395_0 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003614 252.0
PJD2_k127_3971395_1 Maltogenic Amylase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000002582 194.0
PJD2_k127_397818_0 Radical SAM K11784 - 1.21.98.1 1.171e-221 689.0
PJD2_k127_40010_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 498.0
PJD2_k127_40010_1 - - - - 0.0000000000008182 74.0
PJD2_k127_4003524_0 of the RND superfamily K07003 - - 3.848e-309 965.0
PJD2_k127_4003524_1 TonB-linked outer membrane protein, SusC RagA family - - - 1.128e-218 703.0
PJD2_k127_4003524_2 Two component regulator propeller domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000005377 218.0
PJD2_k127_4013931_0 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009562 598.0
PJD2_k127_4013931_1 PFAM Sulfate transporter family - - - 0.000000005114 58.0
PJD2_k127_4019703_0 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000002724 181.0
PJD2_k127_4019703_1 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000797 170.0
PJD2_k127_4019703_2 - - - - 0.000000000000000008313 88.0
PJD2_k127_4020514_0 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 347.0
PJD2_k127_4020514_1 GAF domain-containing protein K08968 - 1.8.4.14 0.000000000000000000000000000000000000000000000000000000000000000000000000003719 255.0
PJD2_k127_4020514_2 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.00000000000000000000002284 102.0
PJD2_k127_4027049_0 Amidohydrolase family K01466 - 3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000007354 256.0
PJD2_k127_4027049_1 Urate oxidase N-terminal - - - 0.0000000000000000000000000000000000000000000000000000004254 197.0
PJD2_k127_403363_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 454.0
PJD2_k127_403363_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000002957 250.0
PJD2_k127_4038105_0 - - - - 0.000000000000000000000000000000000004529 138.0
PJD2_k127_4042084_0 peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 363.0
PJD2_k127_4042991_0 - - - - 0.00000000000000000001106 105.0
PJD2_k127_404373_0 Calx-beta domain - - - 0.000000000000000000000000000000000000000000000000000004316 206.0
PJD2_k127_4057495_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 4.936e-250 779.0
PJD2_k127_4057495_1 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003289 270.0
PJD2_k127_4057495_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000002075 222.0
PJD2_k127_4059219_0 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 613.0
PJD2_k127_4059219_1 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 472.0
PJD2_k127_4059219_2 BlaR1 peptidase M56 - - - 0.0000005783 57.0
PJD2_k127_4066583_0 ABC-type transport system involved in lipoprotein release permease component K09808,K09815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 408.0
PJD2_k127_4066583_1 ABC transporter K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000008985 195.0
PJD2_k127_4066583_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000000000000003471 181.0
PJD2_k127_4079255_0 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004573 519.0
PJD2_k127_4079255_1 Aspartyl protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004764 384.0
PJD2_k127_4084780_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 1.137e-198 628.0
PJD2_k127_4084780_1 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 421.0
PJD2_k127_4084780_2 Domain of unknown function (DUF1905) - - - 0.0000000000000000000000000000002466 125.0
PJD2_k127_4084780_3 - - - - 0.00000000001037 72.0
PJD2_k127_4094865_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 496.0
PJD2_k127_4094865_1 PFAM Acetyltransferase (GNAT) family K03790 - 2.3.1.128 0.00000000000000000005627 91.0
PJD2_k127_4096940_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 532.0
PJD2_k127_4096940_1 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.000000000000000000000000000001152 127.0
PJD2_k127_4098228_0 Gaf domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 358.0
PJD2_k127_4110558_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 2.383e-201 636.0
PJD2_k127_4110558_1 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.000000000000000000000001448 103.0
PJD2_k127_4132209_0 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003028 364.0
PJD2_k127_4132209_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000001252 260.0
PJD2_k127_4136079_0 Belongs to the UbiD family K03182 - 4.1.1.98 7.036e-196 616.0
PJD2_k127_4139709_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 2.573e-225 699.0
PJD2_k127_4139709_1 lipid catabolic process - GO:0003674,GO:0003824,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016787,GO:0033554,GO:0050896,GO:0051716 - 0.00000000000000000000000000000000000000000000000000000000000001066 226.0
PJD2_k127_4141865_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009602 387.0
PJD2_k127_4145843_0 Bacterial protein of unknown function (DUF853) K06915 - - 1.768e-238 746.0
PJD2_k127_4145843_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007833 533.0
PJD2_k127_4145843_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007954 452.0
PJD2_k127_4146181_0 KR domain K13775 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 394.0
PJD2_k127_4146181_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000002448 155.0
PJD2_k127_4151511_0 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007586 570.0
PJD2_k127_4162469_0 Organic solvent tolerance protein OstA - - - 2.738e-276 871.0
PJD2_k127_4175881_0 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 1.071e-214 689.0
PJD2_k127_4179444_0 Belongs to the glycosyl hydrolase 13 family K21575 GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016798,GO:0031216,GO:0044464,GO:0071944 3.2.1.135 9.394e-207 655.0
PJD2_k127_4179444_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000004664 253.0
PJD2_k127_418544_0 chelatase, subunit chli K07391 - - 7.777e-269 835.0
PJD2_k127_418544_1 PFAM Peptidase M1 membrane alanine aminopeptidase K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 559.0
PJD2_k127_418544_3 cell adhesion involved in biofilm formation - - - 0.0002146 49.0
PJD2_k127_4189793_0 DNA polymerase K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 376.0
PJD2_k127_4192025_0 Fibronectin type III domain protein - - - 9.208e-233 733.0
PJD2_k127_419675_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 406.0
PJD2_k127_419675_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000002403 169.0
PJD2_k127_419675_2 Methyltransferase domain - - - 0.00000000000000000000000004851 113.0
PJD2_k127_4200127_0 - - - - 0.0000000000000000000006325 100.0
PJD2_k127_4200127_1 - - - - 0.000000000000000002399 94.0
PJD2_k127_4200755_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009728 370.0
PJD2_k127_4200755_1 PFAM RagB SusD domain protein K21572 - - 0.00000000000000000000000000000000000000000000000000003047 193.0
PJD2_k127_4213228_0 metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003796 570.0
PJD2_k127_4218506_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 459.0
PJD2_k127_4221958_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 399.0
PJD2_k127_4221958_1 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000002647 166.0
PJD2_k127_4221958_2 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000000001255 123.0
PJD2_k127_4230652_0 ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005168 380.0
PJD2_k127_4230652_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000007394 138.0
PJD2_k127_4236502_0 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 514.0
PJD2_k127_4237317_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005859 428.0
PJD2_k127_4237317_1 TPR repeat-containing protein - - - 0.00003759 52.0
PJD2_k127_4238123_0 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 561.0
PJD2_k127_4238276_0 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005964 565.0
PJD2_k127_4238276_1 Luciferase-like monooxygenase - - - 0.00000000000000004103 81.0
PJD2_k127_4238976_0 Peptidase family C25 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000871 604.0
PJD2_k127_4248169_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 342.0
PJD2_k127_4248169_1 Phosphoglycerate mutase family - - - 0.0000000000000000000006592 103.0
PJD2_k127_4248169_2 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.0000000006061 59.0
PJD2_k127_4249102_0 Amidophosphoribosyltransferase K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 389.0
PJD2_k127_4249102_1 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000000000000000000000000000000000000009786 210.0
PJD2_k127_4259136_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2541.0
PJD2_k127_4262178_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 1.246e-271 844.0
PJD2_k127_4262178_1 Gliding motility protein, GldB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001952 288.0
PJD2_k127_4262333_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 362.0
PJD2_k127_4262333_1 Caspase domain - - - 0.0000000000000000000000000000000000000000000000000003474 198.0
PJD2_k127_4262333_2 ABC-2 family transporter protein - - - 0.00000000000000000000000000000000000000003885 154.0
PJD2_k127_4262440_0 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001151 260.0
PJD2_k127_4262440_1 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000005273 254.0
PJD2_k127_4262440_2 - - - - 0.000000000000000000000000000007585 124.0
PJD2_k127_4262440_3 Histidine kinase - - - 0.000000000000000000007799 95.0
PJD2_k127_4278716_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 3.081e-204 641.0
PJD2_k127_4278716_1 hydrolase, family 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 548.0
PJD2_k127_4287962_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 1.588e-195 619.0
PJD2_k127_4287962_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009538 355.0
PJD2_k127_4287962_2 Glutathione peroxidase K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000003886 256.0
PJD2_k127_4287962_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000322 242.0
PJD2_k127_4287962_4 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000000000004265 233.0
PJD2_k127_4287962_5 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000000000000003371 141.0
PJD2_k127_4287962_6 - - - - 0.00000000000000000000000308 104.0
PJD2_k127_4287962_7 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000001147 67.0
PJD2_k127_4288246_0 Erythromycin esterase K06880 - - 6.484e-231 720.0
PJD2_k127_4288246_1 PFAM Aminotransferase class I and II K00812,K14260 - 2.6.1.1,2.6.1.2,2.6.1.66 1.409e-203 641.0
PJD2_k127_4288246_2 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000001062 186.0
PJD2_k127_4288246_3 L,D-transpeptidase catalytic domain - - - 0.0000002405 54.0
PJD2_k127_4288246_4 Protein of unknown function (DUF1573) - - - 0.0000002775 53.0
PJD2_k127_4288409_0 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 476.0
PJD2_k127_4288409_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000002691 72.0
PJD2_k127_42911_0 TonB-dependent Receptor Plug K21573 - - 1.27e-309 974.0
PJD2_k127_42911_1 Belongs to the glycosyl hydrolase 13 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 565.0
PJD2_k127_42911_2 Nudix hydrolase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000909 336.0
PJD2_k127_4291111_0 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 377.0
PJD2_k127_4291111_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000008088 138.0
PJD2_k127_4302151_0 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004367 457.0
PJD2_k127_4302151_1 COGs COG2270 Permease of the major facilitator superfamily K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 306.0
PJD2_k127_4302151_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002883 246.0
PJD2_k127_4309665_0 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000006882 228.0
PJD2_k127_4309665_1 domain protein K05889,K12132,K17713 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0008152,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0016491,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0055114,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 1.1.2.6,2.7.11.1 0.000000005642 69.0
PJD2_k127_4317102_0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K21310 - 2.1.1.334 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 310.0
PJD2_k127_4317524_0 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 370.0
PJD2_k127_4317524_1 Protein of unknown function (DUF3095) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002441 273.0
PJD2_k127_4320914_0 AP endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005192 591.0
PJD2_k127_4320914_1 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004315 293.0
PJD2_k127_4320914_2 Cytochrome c, class I K08738 - - 0.000000000000000000000000000000000001782 142.0
PJD2_k127_4320914_3 Protein of unknown function (DUF1761) - - - 0.0000000000000000005258 92.0
PJD2_k127_4320914_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0001056 46.0
PJD2_k127_4326640_0 Methionine synthase K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 526.0
PJD2_k127_4326640_1 Bacterial Ig-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 468.0
PJD2_k127_4326640_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 338.0
PJD2_k127_4326640_3 B12 binding domain K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 321.0
PJD2_k127_4326640_4 Belongs to the helicase family. UvrD subfamily K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 295.0
PJD2_k127_4327344_0 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000332 243.0
PJD2_k127_4327344_1 Domain of unknown function (DUF4292) - - - 0.000000000000000000000000000000000000000000000000000000000000001016 227.0
PJD2_k127_4327344_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.000000000000000000000000000000000000000000000000000000008789 201.0
PJD2_k127_4327344_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000009142 200.0
PJD2_k127_4330236_0 Intracellular protease, PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009161 275.0
PJD2_k127_4330236_1 - - - - 0.00000000000000003682 86.0
PJD2_k127_4330622_0 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 546.0
PJD2_k127_4330622_1 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.000000000000000000000000000000001435 132.0
PJD2_k127_4330622_2 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 0.0000000000000000000000000000001188 128.0
PJD2_k127_4332816_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 536.0
PJD2_k127_4332816_1 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 351.0
PJD2_k127_4332816_2 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008046 285.0
PJD2_k127_4340522_0 GTP-binding protein TypA K06207 - - 0.0 1073.0
PJD2_k127_4340522_1 pathogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002188 270.0
PJD2_k127_4340522_2 Serine aminopeptidase, S33 - - - 0.000000000000000000004151 94.0
PJD2_k127_4340522_3 Glycosyl transferases group 1 - - - 0.000000000000002031 81.0
PJD2_k127_434592_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001469 291.0
PJD2_k127_4350316_0 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000003782 214.0
PJD2_k127_4350316_1 translation release factor activity - - - 0.000000000000000000000000002701 113.0
PJD2_k127_4351238_0 PFAM Shikimate dehydrogenase substrate binding K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003289 270.0
PJD2_k127_4351238_1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.0000000000000000000000000000000000000000000000000000000000001284 213.0
PJD2_k127_4351238_2 Thioesterase-like superfamily - - - 0.000000000000000000000000000000000000000000000000002438 186.0
PJD2_k127_4353053_0 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 353.0
PJD2_k127_4353053_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000001501 231.0
PJD2_k127_4354831_0 metallophosphoesterase - - - 0.0 1071.0
PJD2_k127_4354831_1 metallophosphoesterase - - - 0.0000000000004551 72.0
PJD2_k127_4355403_0 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 591.0
PJD2_k127_4355403_1 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 407.0
PJD2_k127_4355403_2 Belongs to the MurCDEF family K03802 - 6.3.2.29,6.3.2.30 0.00000000000000000000000000000000000000000000000002987 179.0
PJD2_k127_4358894_0 Peptidase family M48 - - - 0.000000000000004737 76.0
PJD2_k127_4362037_0 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009273 432.0
PJD2_k127_4362037_1 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000006018 199.0
PJD2_k127_4362037_2 NmrA-like family - - - 0.00000005061 55.0
PJD2_k127_4363000_0 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001049 276.0
PJD2_k127_4363000_1 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000005156 183.0
PJD2_k127_4363000_2 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000073 109.0
PJD2_k127_4363678_0 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006677 568.0
PJD2_k127_4363678_1 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K13566 - 3.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 351.0
PJD2_k127_4363678_2 Peptidase family S41 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007941 301.0
PJD2_k127_4363678_3 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000000000000001368 166.0
PJD2_k127_4363678_4 - - - - 0.00000000000000000000000009633 109.0
PJD2_k127_4371782_0 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 290.0
PJD2_k127_4375654_0 Glycosyl transferase 4-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002481 254.0
PJD2_k127_4375654_1 COG0367 Asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000707 235.0
PJD2_k127_4383558_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.52e-258 807.0
PJD2_k127_4383558_1 PFAM Glycosyl transferase family 2 - - - 0.00002656 46.0
PJD2_k127_4389908_0 alpha-2-macroglobulin domain protein K06894 - - 1.851e-221 696.0
PJD2_k127_4389908_1 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000000000000000000000000000000000000000002856 165.0
PJD2_k127_4392392_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 9.807e-233 724.0
PJD2_k127_4392392_1 - - - - 0.0000006038 58.0
PJD2_k127_4392952_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 517.0
PJD2_k127_4392952_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000851 363.0
PJD2_k127_4393310_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 9.731e-291 903.0
PJD2_k127_4393310_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 1.006e-205 651.0
PJD2_k127_4393310_2 serine-type endopeptidase activity K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000124 213.0
PJD2_k127_4393310_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000003805 164.0
PJD2_k127_4393310_4 Domain of unknown function (DUF4369) - - - 0.000000000005811 68.0
PJD2_k127_4397268_0 Carbamoyl-phosphate synthase K01955 - 6.3.5.5 0.0 1067.0
PJD2_k127_4397268_1 Peptidase, M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 512.0
PJD2_k127_4397268_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007752 256.0
PJD2_k127_4405607_0 Hexapeptide repeat of succinyl-transferase K02617,K08279 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 295.0
PJD2_k127_4405607_1 - - - - 0.000000000000002371 82.0
PJD2_k127_4412241_0 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 348.0
PJD2_k127_4412241_1 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000001143 121.0
PJD2_k127_4421257_0 PFAM sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 466.0
PJD2_k127_4421257_1 - - - - 0.00000000000000000000000000000000000131 142.0
PJD2_k127_4421786_0 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412 355.0
PJD2_k127_4421786_1 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000001089 76.0
PJD2_k127_4438860_0 SprB repeat - - - 0.00000003521 64.0
PJD2_k127_4439215_0 Cystathionine beta-synthase K01697 - 4.2.1.22 0.000000000000000000000000000000000000000000000003116 175.0
PJD2_k127_4439215_1 - - - - 0.00000000000000000000000000000000000000008154 157.0
PJD2_k127_4439215_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000007239 126.0
PJD2_k127_4439215_3 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000003682 48.0
PJD2_k127_4440491_0 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000197 229.0
PJD2_k127_4440491_1 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000001007 190.0
PJD2_k127_4450868_0 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 425.0
PJD2_k127_4450868_1 Asparaginase K13051 - 3.4.19.5 0.000000000000000000000000000000000000000000000002308 176.0
PJD2_k127_4450868_2 Outer membrane chaperone Skp K06142 - - 0.000000000000000000000003201 109.0
PJD2_k127_4454104_0 TIGRFAM ComEC Rec2-related protein K02238 - - 0.0000000000000000000000001984 113.0
PJD2_k127_4471322_0 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008532 337.0
PJD2_k127_4471339_0 Sortilin, neurotensin receptor 3, - - - 4.006e-221 688.0
PJD2_k127_4479769_0 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 505.0
PJD2_k127_4479769_1 Glutathione synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002754 263.0
PJD2_k127_4484201_0 Formiminotransferase domain, N-terminal subdomain K00603,K13990 - 2.1.2.5,4.3.1.4 7.489e-233 728.0
PJD2_k127_4484201_1 Belongs to the arginase family K01479,K12255 - 3.5.3.7,3.5.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004456 499.0
PJD2_k127_4484201_2 COG0457 FOG TPR repeat - - - 0.00000000000000001761 85.0
PJD2_k127_4485479_0 Peptidase family C25 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 423.0
PJD2_k127_4485479_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005755 292.0
PJD2_k127_4487275_0 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 487.0
PJD2_k127_4487275_1 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.000000000003621 71.0
PJD2_k127_4501367_0 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 427.0
PJD2_k127_4501367_1 N-acetylglucosamine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 305.0
PJD2_k127_4501367_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000384 239.0
PJD2_k127_4514636_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 3.573e-206 646.0
PJD2_k127_4514636_1 PFAM NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.0000000000000000000000000000000000003124 141.0
PJD2_k127_4517222_0 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 3.332e-208 652.0
PJD2_k127_4517222_1 COG1228 Imidazolonepropionase and related K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 560.0
PJD2_k127_4517222_2 COGs COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I - - - 0.00000000000000000000000000000000000000000000000000002321 190.0
PJD2_k127_4517222_3 - - - - 0.0000000000000000000000007482 111.0
PJD2_k127_4517222_4 PFAM sodium hydrogen exchanger - - - 0.0000000000000000003015 91.0
PJD2_k127_452802_0 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008033 384.0
PJD2_k127_452802_1 O-Antigen ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 317.0
PJD2_k127_452967_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 3.134e-201 632.0
PJD2_k127_452967_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 321.0
PJD2_k127_452967_2 COG1512 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001521 253.0
PJD2_k127_452967_3 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000003212 199.0
PJD2_k127_452967_4 TPM domain - - - 0.0000000000000000000000000000000000000000000006771 169.0
PJD2_k127_452967_5 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000000000001694 134.0
PJD2_k127_452967_6 Tetratricopeptide repeat - - - 0.000000000000000000006024 96.0
PJD2_k127_452967_7 Fibronectin type III domain protein K21571 - - 0.000001689 53.0
PJD2_k127_4530409_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 379.0
PJD2_k127_4530409_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 334.0
PJD2_k127_4530409_2 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.0000000000000000000000007042 107.0
PJD2_k127_4531971_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 2.082e-195 620.0
PJD2_k127_4532353_0 transport, permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003635 317.0
PJD2_k127_4532353_1 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000007068 179.0
PJD2_k127_4534788_0 ABC transporter K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000611 317.0
PJD2_k127_4534788_1 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000003855 191.0
PJD2_k127_4536965_0 Belongs to the DapA family K01714,K21062 - 3.5.4.22,4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 419.0
PJD2_k127_4536965_1 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.00000000000000000000000000000001973 134.0
PJD2_k127_4536965_2 PFAM Aldehyde dehydrogenase K13877 - 1.2.1.26 0.00000000000000000000001575 102.0
PJD2_k127_4537428_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 526.0
PJD2_k127_4537428_1 Thioredoxin reductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000003681 145.0
PJD2_k127_4538063_0 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 494.0
PJD2_k127_4538063_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 364.0
PJD2_k127_4538063_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000371 283.0
PJD2_k127_4538063_3 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005167 252.0
PJD2_k127_4538063_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001524 241.0
PJD2_k127_4538063_5 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000001054 238.0
PJD2_k127_4543910_0 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000001266 238.0
PJD2_k127_4543910_1 ribonuclease BN K07058 - - 0.000000000000000000000000000000000002276 142.0
PJD2_k127_4543910_2 PFAM AhpC TSA family - - - 0.000000000000000000000000000000005083 130.0
PJD2_k127_4546680_0 Outer membrane protein beta-barrel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 375.0
PJD2_k127_4548176_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 4.627e-271 841.0
PJD2_k127_4548176_1 deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 288.0
PJD2_k127_4548176_2 secreted Zn-dependent protease - - - 0.000000000000000000000000000005274 127.0
PJD2_k127_4549641_0 B-1 B cell differentiation - - - 0.000000000000001217 87.0
PJD2_k127_4566802_0 extracellular matrix structural constituent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 398.0
PJD2_k127_4566802_1 tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000001818 164.0
PJD2_k127_4566802_2 Domain of unknown function (DUF4157) - - - 0.00009573 49.0
PJD2_k127_4582787_0 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 453.0
PJD2_k127_4582787_1 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001802 280.0
PJD2_k127_4588243_0 PUA domain containing protein K06969 - 2.1.1.191 9.824e-198 621.0
PJD2_k127_4588243_1 transcriptional regulator K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 434.0
PJD2_k127_4588243_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000005368 164.0
PJD2_k127_4589058_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005852 557.0
PJD2_k127_4589058_1 PKD domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003653 268.0
PJD2_k127_4589058_2 Gliding motility protein - - - 0.000000172 64.0
PJD2_k127_4589343_0 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000003238 169.0
PJD2_k127_4592707_0 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 316.0
PJD2_k127_4592707_1 Electron transfer flavoprotein K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 287.0
PJD2_k127_4595653_0 ABC transporter K18890 - - 1.74e-254 796.0
PJD2_k127_4595653_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 436.0
PJD2_k127_4595653_2 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000000000000000000000009487 193.0
PJD2_k127_4595653_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000005144 93.0
PJD2_k127_4596289_1 C-terminal domain of CHU protein family - - - 0.00000000000002412 86.0
PJD2_k127_4598943_0 Two component transcriptional regulator, LytTR family K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 397.0
PJD2_k127_4598943_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000124 271.0
PJD2_k127_4598943_2 Peptidase, M28 - - - 0.000000000000000000000000000000000000000000000000000009334 197.0
PJD2_k127_4602202_0 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 3.917e-196 622.0
PJD2_k127_4602202_1 Limonene-1,2-epoxide hydrolase catalytic domain - - - 0.00000000005993 64.0
PJD2_k127_4603710_0 Histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 542.0
PJD2_k127_4604307_0 decarboxylase K01585 - 4.1.1.19 7.544e-279 859.0
PJD2_k127_4611035_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 447.0
PJD2_k127_4611035_1 HmuY protein - - - 0.0000000000000001835 80.0
PJD2_k127_4612445_0 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000535 375.0
PJD2_k127_4612445_1 regulation of DNA-templated transcription, elongation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 344.0
PJD2_k127_4612445_2 Domain of unknown function (DUF4399) - - - 0.0000000000000000000000000000000000000000000008743 170.0
PJD2_k127_4620970_0 Protein of unknown function (DUF3494) - - - 0.000000000000000005625 96.0
PJD2_k127_4627227_0 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008061 300.0
PJD2_k127_4627227_1 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004806 233.0
PJD2_k127_4627227_2 Clp protease adaptor protein ClpS K06891 - - 0.000000000000000000000008898 100.0
PJD2_k127_4628986_0 Carboxypeptidase regulatory-like domain - - - 6.274e-194 619.0
PJD2_k127_4628986_1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 468.0
PJD2_k127_4628986_2 DsrE/DsrF-like family - - - 0.000000000000000000000000000000000000000000000000003833 185.0
PJD2_k127_4631416_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 384.0
PJD2_k127_4631416_1 Wd-40 repeat - - - 0.0003986 51.0
PJD2_k127_4633685_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 292.0
PJD2_k127_4633685_1 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004007 268.0
PJD2_k127_4634515_0 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000000000000000000000000000000001734 256.0
PJD2_k127_4634515_1 PFAM Rhomboid family - - - 0.0000000000000000000000000000000000000000000006862 171.0
PJD2_k127_4635618_0 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000005164 251.0
PJD2_k127_4654781_0 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000001714 191.0
PJD2_k127_4654781_1 Methyltransferase domain - - - 0.00000000000000007487 90.0
PJD2_k127_4654901_0 PKD domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005426 574.0
PJD2_k127_4654901_1 Ndr family - - - 0.00000000000000003237 82.0
PJD2_k127_4673903_0 POT family K03305 - - 7.836e-242 758.0
PJD2_k127_4673903_1 POT family K03305 - - 1.275e-196 619.0
PJD2_k127_4673903_2 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 360.0
PJD2_k127_4687156_0 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 3.489e-202 638.0
PJD2_k127_4687156_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009663 295.0
PJD2_k127_4687156_2 PFAM Biopolymer transport protein ExbD TolR - - - 0.000000000000000000000000000000000000000000000000000000000000006862 222.0
PJD2_k127_4687156_3 PFAM Biopolymer transport protein ExbD TolR - - - 0.000000000000000000000000000009164 121.0
PJD2_k127_4688505_0 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 578.0
PJD2_k127_4688505_1 Protein conserved in bacteria K01446 - - 0.000000000000000000000000000000000000000004093 160.0
PJD2_k127_4693587_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 481.0
PJD2_k127_4693587_1 chaperone-mediated protein folding K20543 - - 0.00000000000000000007099 94.0
PJD2_k127_4695358_0 ABC transporter transmembrane region K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 575.0
PJD2_k127_4695358_1 Glycosyl transferases group 1 - - - 0.0001499 45.0
PJD2_k127_4696807_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 394.0
PJD2_k127_4696807_1 COGs COG3263 NhaP-type Na H and K H antiporter with a unique C-terminal domain K11105 - - 0.000000000000000000007998 93.0
PJD2_k127_4698933_0 Penicillin binding protein transpeptidase domain K17838 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 386.0
PJD2_k127_4702986_0 PFAM Polysulphide reductase, NrfD K00185 - - 2.051e-224 697.0
PJD2_k127_4702986_1 Oxidoreductase K00184 - - 0.00000000000000000000000000000000000000000000000000000006704 199.0
PJD2_k127_4714592_0 DNA mismatch repair protein MutS - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 382.0
PJD2_k127_4714592_1 Pkd domain - - - 0.00004603 55.0
PJD2_k127_4720556_0 Multidrug resistance protein K11741 - - 0.000000000000000000000000000000000000000009012 155.0
PJD2_k127_4720556_1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000002201 93.0
PJD2_k127_4720556_2 Glycosyl hydrolase family 47 - - - 0.00000000000000002725 81.0
PJD2_k127_4732392_0 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005687 347.0
PJD2_k127_4732392_1 Forms part of the polypeptide exit tunnel K02926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001221 250.0
PJD2_k127_4732392_2 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000001189 198.0
PJD2_k127_4747194_0 COGs COG0488 ATPase components of ABC transporter with duplicated ATPase domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008697 256.0
PJD2_k127_4747194_1 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000001374 152.0
PJD2_k127_474737_0 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006591 301.0
PJD2_k127_474737_1 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000003937 166.0
PJD2_k127_474737_2 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000006826 104.0
PJD2_k127_474737_3 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000004478 63.0
PJD2_k127_4754075_0 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005276 312.0
PJD2_k127_4754075_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000001374 251.0
PJD2_k127_4754075_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000004799 244.0
PJD2_k127_4754075_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000002193 231.0
PJD2_k127_4757567_0 Pregnancy-associated plasma protein-A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 441.0
PJD2_k127_4757567_1 seryl-tRNA synthetase K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009484 393.0
PJD2_k127_4757567_2 Fatty acid desaturase K00496 - 1.14.15.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 394.0
PJD2_k127_4758478_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 392.0
PJD2_k127_4758478_1 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000000000001383 156.0
PJD2_k127_4758478_3 - - - - 0.000000000001937 69.0
PJD2_k127_4796244_0 COG3279 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000009693 87.0
PJD2_k127_4796244_1 Belongs to the peptidase S8 family - - - 0.000000000002914 74.0
PJD2_k127_4812488_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.608e-201 629.0
PJD2_k127_4819205_0 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 606.0
PJD2_k127_4819205_1 Belongs to the HpcH HpaI aldolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 535.0
PJD2_k127_4819205_2 Saccharopine dehydrogenase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 449.0
PJD2_k127_4819205_3 ubiE/COQ5 methyltransferase family K15256 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007828 383.0
PJD2_k127_4819205_4 PFAM Scaffold protein Nfu NifU N terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 347.0
PJD2_k127_4819205_5 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009621 339.0
PJD2_k127_4819205_6 ArsC family K00537 - 1.20.4.1 0.0000000000000000000000000000000000000000000000007446 179.0
PJD2_k127_4819205_7 - - - - 0.0000000000000000000000000000000006868 142.0
PJD2_k127_4819205_8 4Fe-4S dicluster domain K00184 - - 0.0000003824 52.0
PJD2_k127_4835678_0 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000000000000000000006597 93.0
PJD2_k127_4835678_1 - - - - 0.0000000000000007399 86.0
PJD2_k127_4835678_2 Protein of unknown function (DUF3095) - - - 0.000000000000002748 76.0
PJD2_k127_4835678_3 BON domain - - - 0.0001225 49.0
PJD2_k127_4837500_0 Belongs to the peptidase M16 family K07263 - - 3.033e-195 629.0
PJD2_k127_4837500_1 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K03790 - 2.3.1.128 0.000000000000000000000000000000000000000000000000000000001755 213.0
PJD2_k127_4837500_3 Belongs to the peptidase M16 family K07263 - - 0.000000002027 61.0
PJD2_k127_4843370_0 Peptidase family M1 domain - - - 3.672e-248 774.0
PJD2_k127_4843457_0 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) K03545 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 612.0
PJD2_k127_4843457_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000001181 235.0
PJD2_k127_4843457_2 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000003071 144.0
PJD2_k127_4843457_3 - - - - 0.000601 43.0
PJD2_k127_4844676_0 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 419.0
PJD2_k127_4845835_0 Penicillin-binding Protein K05367 - 2.4.1.129 0.0 1041.0
PJD2_k127_4850639_0 Domain of unknown function (DUF4294) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006323 252.0
PJD2_k127_4850639_1 PFAM Cytochrome c assembly protein K02198 - - 0.0000000000000000000000000003291 119.0
PJD2_k127_4850639_2 GlcNAc-PI de-N-acetylase K01463 - - 0.0000000000000002815 78.0
PJD2_k127_4852585_0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01921 - 6.3.2.4 1.859e-216 683.0
PJD2_k127_4852585_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006098 336.0
PJD2_k127_4852585_2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000006466 242.0
PJD2_k127_4853813_0 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 322.0
PJD2_k127_4853813_1 NADPH:quinone reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000001669 246.0
PJD2_k127_4853813_2 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.00000000000000000000000000000000000000000000000000000000000000000004218 239.0
PJD2_k127_4868535_0 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 5.343e-206 648.0
PJD2_k127_4869544_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1325.0
PJD2_k127_4869544_1 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004282 252.0
PJD2_k127_4869544_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000007817 148.0
PJD2_k127_4869544_3 ATP synthase K02114 - - 0.00000000000000000000000000000003296 127.0
PJD2_k127_4869544_4 ATP-binding region, ATPase domain protein - - - 0.00000000248 62.0
PJD2_k127_4871190_0 Peptidase family M1 domain K01256 - 3.4.11.2 4.661e-271 861.0
PJD2_k127_4871190_1 Protein involved in cellulose biosynthesis - - - 0.000000000000000000000000000000000001905 145.0
PJD2_k127_4879526_0 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 485.0
PJD2_k127_4879526_1 succinate dehydrogenase K00241 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 293.0
PJD2_k127_4879526_2 - - - - 0.000000000000001004 77.0
PJD2_k127_4891149_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 501.0
PJD2_k127_4891149_1 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 340.0
PJD2_k127_4891149_2 Transcriptional regulatory protein, C terminal K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 299.0
PJD2_k127_4893380_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 525.0
PJD2_k127_490014_0 alginic acid biosynthetic process - - - 0.000000000000000007467 98.0
PJD2_k127_4903453_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000001177 209.0
PJD2_k127_4903453_1 Bacterial SH3 domain homologues - - - 0.00000000000000000000000000000000000000000000000000000003106 199.0
PJD2_k127_4903453_2 hyperosmotic response K04065 - - 0.000000000008294 65.0
PJD2_k127_4911056_0 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009845 531.0
PJD2_k127_4911584_0 alpha-2-macroglobulin domain protein K06894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004386 535.0
PJD2_k127_4920877_0 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 606.0
PJD2_k127_4920877_1 PFAM Pregnancy-associated plasma protein-A - - - 0.000000000000000000000000000000000000000000000000000000000517 210.0
PJD2_k127_4921337_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1714.0
PJD2_k127_4921366_0 Nucleoside K03289,K11537 - - 3.073e-199 627.0
PJD2_k127_4921366_1 DNA polymerase III alpha subunit K02337 - 2.7.7.7 3.472e-196 620.0
PJD2_k127_4921366_2 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003803 592.0
PJD2_k127_4921366_3 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000000000003052 209.0
PJD2_k127_4929410_0 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 327.0
PJD2_k127_4929410_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 311.0
PJD2_k127_4937144_0 Tyrosine recombinase XerC K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 295.0
PJD2_k127_4937144_1 transport - - - 0.000000009908 63.0
PJD2_k127_4940406_0 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 479.0
PJD2_k127_4940406_1 Tetratricopeptide repeat - - - 0.000000006986 68.0
PJD2_k127_4950805_0 ABC transporter K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004811 571.0
PJD2_k127_4950805_1 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000001729 150.0
PJD2_k127_4958789_0 Putative porin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001374 258.0
PJD2_k127_4958789_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000005919 235.0
PJD2_k127_4967023_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 506.0
PJD2_k127_4967023_1 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001633 279.0
PJD2_k127_4968646_0 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000004442 255.0
PJD2_k127_4968646_1 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.0000000000000000000000000000000000000003798 153.0
PJD2_k127_4968646_2 - - - - 0.0000007232 58.0
PJD2_k127_4971983_0 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007875 496.0
PJD2_k127_4971983_1 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000269 207.0
PJD2_k127_4985810_0 PFAM Integral membrane protein DUF95 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 415.0
PJD2_k127_4985810_1 pfam rdd - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001223 259.0
PJD2_k127_4995421_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 518.0
PJD2_k127_5004500_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 471.0
PJD2_k127_5007501_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0 1089.0
PJD2_k127_5007501_1 Serine aminopeptidase, S33 K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 442.0
PJD2_k127_5007501_2 peptidase K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 443.0
PJD2_k127_5007501_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 327.0
PJD2_k127_5007501_4 Hydrolase with alpha beta fold protein K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000561 274.0
PJD2_k127_5007501_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000003346 226.0
PJD2_k127_5007501_6 Transport of potassium into the cell K03549 - - 0.00000000000000000000000000000000000000000000000000000003368 197.0
PJD2_k127_5018535_0 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 405.0
PJD2_k127_5018535_1 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 332.0
PJD2_k127_5018535_2 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 285.0
PJD2_k127_5018535_3 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000002157 251.0
PJD2_k127_5018535_4 Protein of unknown function (DUF1203) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006074 249.0
PJD2_k127_5018535_5 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000004072 158.0
PJD2_k127_5018535_6 Protein of unknown function (DUF998) - - - 0.000000000000000000002524 102.0
PJD2_k127_502221_0 GAF domain K03406 - - 0.0 1085.0
PJD2_k127_502299_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007572 468.0
PJD2_k127_502299_1 PQQ enzyme repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 327.0
PJD2_k127_5023509_0 PFAM Cytochrome c assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 352.0
PJD2_k127_5023509_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 316.0
PJD2_k127_5023509_2 PFAM Cytochrome c-type biogenesis protein CcmB K02194 - - 0.0000000000003947 70.0
PJD2_k127_5024608_0 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000951 582.0
PJD2_k127_5024608_1 Uncharacterized conserved protein (DUF2267) - - - 0.0000000000000000000000000000000000000000002812 162.0
PJD2_k127_5024608_2 - - - - 0.0000000000000000004286 93.0
PJD2_k127_5027615_0 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 528.0
PJD2_k127_5029315_0 Protein of unknown function (DUF2723) - - - 3.39e-284 884.0
PJD2_k127_5029315_1 S-adenosyl-l-methionine hydroxide adenosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 291.0
PJD2_k127_5046345_0 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000001465 199.0
PJD2_k127_5046345_1 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.0000000000000000000000000000000000009994 144.0
PJD2_k127_5046345_2 - - - - 0.0000000000284 66.0
PJD2_k127_5047677_0 COG2366 Protein related to penicillin acylase K01434 - 3.5.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 599.0
PJD2_k127_5047677_1 Peptidase family M48 K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 351.0
PJD2_k127_5047677_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 308.0
PJD2_k127_5047677_3 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005907 258.0
PJD2_k127_5047804_0 N-acetyl-alpha-D-glucosaminyl L-malate synthase K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007059 377.0
PJD2_k127_5047804_1 Peptidase, M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001874 293.0
PJD2_k127_5050741_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 415.0
PJD2_k127_5050741_1 PFAM Coenzyme A transferase K01029,K01032 - 2.8.3.5,2.8.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 367.0
PJD2_k127_5050741_2 PFAM Coenzyme A transferase K01027,K01028,K01031,K01034 - 2.8.3.5,2.8.3.6,2.8.3.8,2.8.3.9 0.00000000000000000000000000000000000000000000000000000000000000001603 224.0
PJD2_k127_5050741_3 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000001528 187.0
PJD2_k127_5050741_4 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000005378 160.0
PJD2_k127_5073478_0 iron-sulfur cluster-binding protein K18929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009115 582.0
PJD2_k127_5073478_1 Protein of unknown function (DUF3109) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 319.0
PJD2_k127_5080288_0 COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001969 261.0
PJD2_k127_5080288_1 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P) K00849 - 2.7.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000002092 243.0
PJD2_k127_5086202_0 Mg2 transporter protein, CorA family protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 490.0
PJD2_k127_5086202_1 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004966 399.0
PJD2_k127_5086202_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009183 392.0
PJD2_k127_5086202_3 pfam nudix - - - 0.000000000000000000000000000000000000000000000000000000000000001364 221.0
PJD2_k127_5086202_4 Pfam Activator of Hsp90 ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000009376 214.0
PJD2_k127_5102312_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 540.0
PJD2_k127_5102312_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000001922 218.0
PJD2_k127_5102312_2 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000004496 141.0
PJD2_k127_5102312_3 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000000000000704 115.0
PJD2_k127_5102312_4 Domain of unknown function (DUF4295) - - - 0.0000000000000000000006325 96.0
PJD2_k127_5105497_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 313.0
PJD2_k127_5105497_1 Histidine kinase - - - 0.0000000000000000000000001181 107.0
PJD2_k127_5110050_0 TIGRFAM Peroxiredoxin, osmotically inducible protein C, subgroup K04063 - - 0.0000000000000000000000000000000000000000000001224 171.0
PJD2_k127_5110050_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000004537 72.0
PJD2_k127_5115814_0 Domain of unknown function (DUF1858) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001045 256.0
PJD2_k127_5115814_1 Belongs to the heme-copper respiratory oxidase family - - - 0.000000000000000000000000000000000000001378 151.0
PJD2_k127_5115814_2 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.000000000008253 65.0
PJD2_k127_5116842_0 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 474.0
PJD2_k127_5116842_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004408 351.0
PJD2_k127_5116842_2 Transglutaminase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 306.0
PJD2_k127_511972_0 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 521.0
PJD2_k127_5126309_0 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005221 434.0
PJD2_k127_5126309_1 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 323.0
PJD2_k127_5126309_2 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000005872 215.0
PJD2_k127_5126309_3 cytochrome complex assembly K02198,K02200,K04016,K04017,K04018 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0018193,GO:0018198,GO:0018378,GO:0019538,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098567,GO:1901564 - 0.0000000000000000000000000000000000000000000000001677 187.0
PJD2_k127_5129900_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009195 399.0
PJD2_k127_5129900_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000004697 170.0
PJD2_k127_5136093_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 1.042e-214 671.0
PJD2_k127_5136093_1 TamB, inner membrane protein subunit of TAM complex - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006437 622.0
PJD2_k127_5136093_2 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000001027 117.0
PJD2_k127_5139983_0 DNA mismatch repair protein MutT K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008983 485.0
PJD2_k127_5141180_0 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 474.0
PJD2_k127_5141180_1 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000001266 201.0
PJD2_k127_5141180_2 Cytochrome c - - - 0.000000000000001189 81.0
PJD2_k127_5141180_3 Beta-lactamase - - - 0.0000004232 51.0
PJD2_k127_5143179_0 CO dehydrogenase flavoprotein C-terminal domain K13481 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004369 505.0
PJD2_k127_5143179_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K13482 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 331.0
PJD2_k127_5143179_2 - - - - 0.00000000000002083 78.0
PJD2_k127_5147616_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 597.0
PJD2_k127_5147616_1 amidohydrolase K20810 - 3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000219 262.0
PJD2_k127_5149352_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 408.0
PJD2_k127_5149352_1 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 349.0
PJD2_k127_5149352_2 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001213 257.0
PJD2_k127_5149352_3 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000000000001734 89.0
PJD2_k127_5176800_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 556.0
PJD2_k127_5176800_1 Cell division protein K03589 - - 0.0000000000000000000000000000000000000000000000000000000000000000001407 237.0
PJD2_k127_5181273_0 Amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008225 613.0
PJD2_k127_5181273_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000004072 158.0
PJD2_k127_5184912_0 PFAM TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 557.0
PJD2_k127_5203172_0 Glucosamine-6-phosphate K02564 - 3.5.99.6 7.817e-228 709.0
PJD2_k127_5203172_1 Bax inhibitor 1 like - - - 0.00000000000000000000000000000000000000000000000000000000000000164 227.0
PJD2_k127_5203172_2 Permease - - - 0.00000000000000000000000214 104.0
PJD2_k127_5208546_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007824 327.0
PJD2_k127_5208546_1 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002907 304.0
PJD2_k127_5208546_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001253 225.0
PJD2_k127_5223613_0 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000607 417.0
PJD2_k127_5223613_1 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 342.0
PJD2_k127_5223613_2 GCN5-related N-acetyl-transferase K06975 - - 0.0000000000000000000000000000000000000006128 151.0
PJD2_k127_5224271_0 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005278 571.0
PJD2_k127_5224271_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0000000000000000000000001124 107.0
PJD2_k127_5235046_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 5.358e-242 751.0
PJD2_k127_5235046_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 367.0
PJD2_k127_5235046_2 NADH-quinone oxidoreductase, E subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000665 294.0
PJD2_k127_5235046_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005691 269.0
PJD2_k127_5235046_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335,K18331 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000000000000000000000000000006103 184.0
PJD2_k127_5235046_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000000001155 153.0
PJD2_k127_5235046_6 Domain of unknown function (DUF4440) - - - 0.00000000000001845 79.0
PJD2_k127_5235984_0 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005549 355.0
PJD2_k127_5235984_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000002254 57.0
PJD2_k127_5235984_2 Endonuclease I - - - 0.00000001338 64.0
PJD2_k127_5237631_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 358.0
PJD2_k127_5237631_1 protein with SCP PR1 domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 340.0
PJD2_k127_5237631_2 - - - - 0.0000001034 55.0
PJD2_k127_525375_0 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000002124 226.0
PJD2_k127_525375_1 RF-1 domain K15034 - - 0.000000000000000000000000000000000005287 140.0
PJD2_k127_525375_2 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000002486 81.0
PJD2_k127_525375_3 lipolytic protein G-D-S-L family - - - 0.000000005542 65.0
PJD2_k127_5260240_0 COGs COG1253 Hemolysins and related protein containing CBS domains K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 466.0
PJD2_k127_5260240_1 Phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000005251 216.0
PJD2_k127_5260240_2 PFAM sulfatase - - - 0.00000000000000006382 83.0
PJD2_k127_5274676_0 COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit K02621 - - 0.0 1237.0
PJD2_k127_5274676_1 - - - - 0.000000000000003447 76.0
PJD2_k127_527903_0 AAA ATPase central domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 434.0
PJD2_k127_527903_1 peptidase - - - 0.0000000000000000000000000000000005351 138.0
PJD2_k127_5305424_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 3.695e-245 781.0
PJD2_k127_5315417_0 Protease prsW family - - - 0.0000000000000000000000000000000000000000000000000000002326 209.0
PJD2_k127_5315417_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000007885 172.0
PJD2_k127_5315417_2 Transcriptional regulator - - - 0.00000000000002369 74.0
PJD2_k127_5315538_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000001767 198.0
PJD2_k127_5315538_1 D-alanyl-D-alanine carboxypeptidase - - - 0.0000000000000000000000000000000000000004443 159.0
PJD2_k127_5315538_2 hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000002675 145.0
PJD2_k127_5315538_3 Domain of unknown function (DUF4476) - - - 0.00000005182 66.0
PJD2_k127_5315957_0 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 3.521e-256 792.0
PJD2_k127_5315957_1 PFAM ZIP Zinc transporter K07238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 329.0
PJD2_k127_5315957_2 cyclic nucleotide binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008115 241.0
PJD2_k127_5315957_3 SPTR ATPase, P-type (Transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000002257 201.0
PJD2_k127_5317714_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 547.0
PJD2_k127_5317714_1 Peptidase family S41 - - - 0.000000000000000000000000000000000000000000001528 170.0
PJD2_k127_5321452_0 acyl-CoA dehydrogenase - - - 9.253e-260 805.0
PJD2_k127_5325409_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 535.0
PJD2_k127_5325409_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 379.0
PJD2_k127_5325409_2 Methyltransferase small domain K15460 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016430,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.223 0.00000000000000000000001596 102.0
PJD2_k127_5328329_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 347.0
PJD2_k127_5328329_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000001003 198.0
PJD2_k127_5328329_3 Winged helix DNA-binding domain - - - 0.0000000000000000000000001544 106.0
PJD2_k127_5335381_0 Glycosyl hydrolase-like 10 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 349.0
PJD2_k127_5335381_1 Cytochrome c - - - 0.000000000000000000000002956 106.0
PJD2_k127_5339121_0 Outer membrane protein SusF_SusE K21571 - - 0.00000000000000000000000000000000000000000000000000000000000000001315 234.0
PJD2_k127_5347549_0 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 400.0
PJD2_k127_5347549_1 Succinate dehydrogenase fumarate reductase Fe-S protein subunit K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 364.0
PJD2_k127_5347549_2 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003535 343.0
PJD2_k127_5354533_0 regulator of chromosome condensation, RCC1 - - - 0.0000000000000000000003382 108.0
PJD2_k127_5354533_1 G8 domain - - - 0.000000000000001733 89.0
PJD2_k127_5368420_0 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 577.0
PJD2_k127_5368420_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335,K18331 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008826 325.0
PJD2_k127_5373556_0 Transcriptional regulator, AraC family - - - 0.00000000000000000000000000000000000000000000000000003178 193.0
PJD2_k127_5373556_1 Heavy-metal-associated domain - - - 0.0000000000000000000000000000000000000001931 156.0
PJD2_k127_5373556_2 - - - - 0.000000000000000000000000000000000000002507 153.0
PJD2_k127_5380934_0 methionine sulfoxide reductase K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007256 296.0
PJD2_k127_5380934_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001273 254.0
PJD2_k127_5380934_2 Protein of unknown function (DUF1569) - - - 0.0000005244 56.0
PJD2_k127_5383085_0 PFAM Low affinity iron permease - - - 0.000000000000000000000000000000000000000000000000001034 187.0
PJD2_k127_5383085_1 Outer membrane protein beta-barrel family - - - 0.0000000000000000000000000000000003945 137.0
PJD2_k127_5383085_2 Domain of unknown function (DUF1905) - - - 0.00000000000000000000000000000001295 134.0
PJD2_k127_5392709_0 PFAM Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 336.0
PJD2_k127_5392709_1 - - - - 0.0000000000000000000000000000000000000000000000000000000001593 204.0
PJD2_k127_5396045_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 383.0
PJD2_k127_5396045_1 LysM domain K01449 - 3.5.1.28 0.00000000000000000000000000000000000001375 156.0
PJD2_k127_5396045_2 PFAM Bacterial Fmu (Sun) eukaryotic nucleolar NOL1 Nop2p - - - 0.00000000000000000000000000000000001606 140.0
PJD2_k127_5399344_0 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000749 240.0
PJD2_k127_5399344_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000000000000000000000003773 165.0
PJD2_k127_5405137_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 8.171e-222 693.0
PJD2_k127_5405137_1 SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000003482 120.0
PJD2_k127_5407458_0 Acyl-protein synthetase, LuxE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 388.0
PJD2_k127_5407458_1 Belongs to the thioredoxin family K03671 - - 0.000000000000000001203 90.0
PJD2_k127_5407458_3 recombinase activity - - - 0.00006045 46.0
PJD2_k127_5408416_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 1.143e-210 658.0
PJD2_k127_5408416_1 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 584.0
PJD2_k127_5408416_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 568.0
PJD2_k127_5408416_3 MerR family K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007961 246.0
PJD2_k127_5416852_0 HemY domain protein - - - 0.000000000000000000000000000000000000000000000002327 201.0
PJD2_k127_5416852_1 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000006118 166.0
PJD2_k127_5418257_0 Sulfate permease family K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 451.0
PJD2_k127_5418257_1 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000002765 93.0
PJD2_k127_5426933_0 PFAM Cache K08738 - - 0.00000000000000000000000000000000000000000000000000000000000001189 237.0
PJD2_k127_5426933_1 Single Cache domain 2 K07647 - 2.7.13.3 0.000000000000000000000000000000000000000002331 175.0
PJD2_k127_5426933_2 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.0000000001881 62.0
PJD2_k127_5426933_3 Transcriptional regulator, Crp Fnr family - - - 0.0000000003452 63.0
PJD2_k127_5428088_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 512.0
PJD2_k127_5428088_1 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000000000003926 232.0
PJD2_k127_542926_0 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004154 458.0
PJD2_k127_5436183_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1475.0
PJD2_k127_5436183_2 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - 0.000000000000000000000000000000009924 133.0
PJD2_k127_5437945_0 Transcriptional regulator, AraC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008237 369.0
PJD2_k127_5437945_1 Esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000008948 137.0
PJD2_k127_5458920_0 calcium- and calmodulin-responsive adenylate cyclase activity K01406 - 3.4.24.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 433.0
PJD2_k127_5458920_1 Ribonuclease H-like K09776 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006516 301.0
PJD2_k127_5458920_2 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000011 176.0
PJD2_k127_5458920_3 Belongs to the GbsR family - - - 0.00000000000000000000000000174 113.0
PJD2_k127_5468402_0 Oxidoreductase - - - 2.891e-255 792.0
PJD2_k127_5480492_0 PFAM Aminotransferase class I and II K14287 - 2.6.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 585.0
PJD2_k127_5480492_1 YjbR - - - 0.0000000000000000000000000000000000000000000000001367 178.0
PJD2_k127_5480492_2 peptidyl-tyrosine sulfation - - - 0.00000000000000000002207 99.0
PJD2_k127_5480492_3 Endoribonuclease L-PSP - - - 0.00000000000000000252 84.0
PJD2_k127_5482263_0 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004722 559.0
PJD2_k127_5482263_1 Peptidase family C25 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009068 283.0
PJD2_k127_5485483_0 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 306.0
PJD2_k127_5485483_1 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004399 266.0
PJD2_k127_5485483_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000008855 65.0
PJD2_k127_5491239_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 383.0
PJD2_k127_5491239_1 S53, subtilisin kexin sedolisin - - - 0.00000000001604 72.0
PJD2_k127_5498326_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 8.187e-308 953.0
PJD2_k127_5498326_1 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001789 263.0
PJD2_k127_5515235_0 Domain of unknown function (DUF5118) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 493.0
PJD2_k127_5517665_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 455.0
PJD2_k127_5524418_0 Peptidase family S41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006502 575.0
PJD2_k127_5524418_1 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000001564 235.0
PJD2_k127_5527762_0 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008086 457.0
PJD2_k127_5527762_1 PFAM Zinc carboxypeptidase - - - 0.00002443 47.0
PJD2_k127_554103_0 S1 P1 Nuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 413.0
PJD2_k127_554103_1 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000000265 181.0
PJD2_k127_554103_2 alpha-L-arabinofuranosidase - - - 0.000006591 53.0
PJD2_k127_5546635_0 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 360.0
PJD2_k127_5546635_1 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000466 270.0
PJD2_k127_5546635_2 Polysaccharide biosynthesis protein - - - 0.0000000000000000000002072 101.0
PJD2_k127_5550324_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 6.005e-222 690.0
PJD2_k127_5550324_1 Domain of unknown function (DUF4270) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 325.0
PJD2_k127_5550324_2 PFAM Starch synthase, catalytic domain K00703 - 2.4.1.21 0.000000000000000000000000000000387 123.0
PJD2_k127_555957_0 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 548.0
PJD2_k127_555957_1 PFAM Peptidase M22, glycoprotease K14742 - - 0.000000000000000000000000000000000000000000000000000000000002109 215.0
PJD2_k127_555957_2 endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000000000003458 189.0
PJD2_k127_555957_3 3-hydroxyacyl-CoA dehydrogenase K00074,K17735 - 1.1.1.108,1.1.1.157 0.000000000000000000000000000000000000000000000001431 180.0
PJD2_k127_555957_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000001038 155.0
PJD2_k127_555957_5 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000001242 105.0
PJD2_k127_5568082_0 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 328.0
PJD2_k127_5568082_1 Domain of unknown function (DUF5118) - - - 0.0000000000000000000000000000000000000401 149.0
PJD2_k127_5568082_2 - - - - 0.0000004144 53.0
PJD2_k127_5571736_0 glutamine synthetase K01915 - 6.3.1.2 0.0 1215.0
PJD2_k127_5571736_1 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000108 168.0
PJD2_k127_5571736_2 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end - - - 0.00000009001 62.0
PJD2_k127_5591418_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009677 479.0
PJD2_k127_5591418_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006011 264.0
PJD2_k127_5602299_0 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 400.0
PJD2_k127_5602299_1 PFAM EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 357.0
PJD2_k127_5602299_2 cyclopropane-fatty-acyl-phospholipid synthase K20444 - - 0.000000000000000000000000000000000000000000000000000000000000001995 227.0
PJD2_k127_5602299_3 peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.0000000000000000000000000000000000006069 144.0
PJD2_k127_5630627_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005398 501.0
PJD2_k127_5638740_0 Allantoicase repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 416.0
PJD2_k127_5638740_1 TIGRFAM allantoinase K01466 - 3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008724 335.0
PJD2_k127_5638740_2 OHCU decarboxylase K16840 - 4.1.1.97 0.000000000000000000000000000000000000000000000003682 177.0
PJD2_k127_5638740_3 Transthyretin K07127 - 3.5.2.17 0.0000000000000000000000000000000000002366 143.0
PJD2_k127_5638740_4 Belongs to the HpcH HpaI aldolase family - - - 0.00000000000000000000000000001148 119.0
PJD2_k127_5648150_0 Insulinase (Peptidase family M16) K07263 - - 3.456e-278 872.0
PJD2_k127_5648150_1 metallopeptidase activity - - - 0.00000000000000000000000000000000000191 157.0
PJD2_k127_5649586_0 Glycosyltransferase, group 2 family protein K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 329.0
PJD2_k127_5660694_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 577.0
PJD2_k127_5664620_0 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 605.0
PJD2_k127_5664620_1 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000009612 198.0
PJD2_k127_5670040_0 alanine dehydrogenase K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324 374.0
PJD2_k127_5670040_1 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000000000000000004299 173.0
PJD2_k127_569294_0 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000813 203.0
PJD2_k127_569294_1 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000006976 147.0
PJD2_k127_5695608_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006252 286.0
PJD2_k127_5695608_1 Glycosyltransferase like family 2 K17250 - 2.4.1.293 0.0000000000000000000000000000000000000000005139 166.0
PJD2_k127_5710235_0 - - - - 0.0000000000000000000000000000000000001914 142.0
PJD2_k127_5710235_1 Transcriptional regulator, AraC family - - - 0.0000000000000000000000000000001256 135.0
PJD2_k127_5710722_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006964 336.0
PJD2_k127_5711025_0 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001064 250.0
PJD2_k127_5711025_1 Belongs to the ompA family - - - 0.00000000000000000000000000000000009567 136.0
PJD2_k127_571927_0 Gliding motility-associated protein GldM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 324.0
PJD2_k127_571927_1 TIGRFAM gliding motility associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000933 301.0
PJD2_k127_5719905_0 Proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 7.438e-285 887.0
PJD2_k127_5719905_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 1.047e-230 722.0
PJD2_k127_5719905_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 593.0
PJD2_k127_5719905_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 547.0
PJD2_k127_5719905_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000003568 252.0
PJD2_k127_5719905_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000002803 231.0
PJD2_k127_5719905_6 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000003094 201.0
PJD2_k127_5719905_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000000000009449 173.0
PJD2_k127_5725844_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 507.0
PJD2_k127_5725844_1 membrane protein required for spore maturation in B.subtilis K06373 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 508.0
PJD2_k127_5726428_0 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007748 281.0
PJD2_k127_5726428_1 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000002161 143.0
PJD2_k127_5726428_2 PFAM Starch synthase, catalytic domain K00703 - 2.4.1.21 0.0000004932 51.0
PJD2_k127_574027_0 of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007434 380.0
PJD2_k127_574027_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000184 274.0
PJD2_k127_574027_2 - - - - 0.000000000000000000000000000000000004808 139.0
PJD2_k127_5753041_0 PhnA protein K06193 - - 0.0000000000000000000000000000000000000000000000000000000000000000003638 234.0
PJD2_k127_5753041_1 CYTH - - - 0.00000000000000000000000000000000000000000000000000000000000000005562 226.0
PJD2_k127_5753041_2 DinB family - - - 0.0000000000000000000000000000000000000000000000000000000001462 207.0
PJD2_k127_5753041_3 Protein of unknown function (DUF4256) - - - 0.0000000000000000000000000000000000000000000000000000000007594 202.0
PJD2_k127_5757998_0 Outer membrane protein transport protein, Ompp1 FadL TodX K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 519.0
PJD2_k127_5757998_1 PFAM lipolytic protein G-D-S-L family - - - 0.00000000003291 63.0
PJD2_k127_5759628_0 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005508 325.0
PJD2_k127_5765198_0 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 362.0
PJD2_k127_5765198_1 sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family - - - 0.000000000000001083 85.0
PJD2_k127_5767160_0 EcsC protein family - - - 0.00000000000000000000000000000000000000000000000000001304 196.0
PJD2_k127_5767160_1 EcsC protein family - - - 0.00000000000000000000002166 103.0
PJD2_k127_5767160_2 - - - - 0.00000000000000000006876 90.0
PJD2_k127_5767160_3 - - - - 0.000000000000009246 74.0
PJD2_k127_5778254_0 receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 466.0
PJD2_k127_5778254_1 PFAM Methyltransferase type 12 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 332.0
PJD2_k127_5778254_2 Glutamine cyclotransferase K00683 - 2.3.2.5 0.00000000000000000007511 89.0
PJD2_k127_5778254_3 - - - - 0.000000000000000007206 93.0
PJD2_k127_577855_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007415 436.0
PJD2_k127_577855_1 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000006803 172.0
PJD2_k127_577855_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000001318 91.0
PJD2_k127_577855_3 Domain of unknown function (DUF4266) - - - 0.00002182 49.0
PJD2_k127_5790631_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 339.0
PJD2_k127_5790631_1 PHP domain protein - - - 0.0000000000000000000000000000000000000000002861 167.0
PJD2_k127_5790631_2 PFAM nucleic acid binding, OB-fold, tRNA - - - 0.000000007501 65.0
PJD2_k127_5791649_0 PFAM PSP1 C-terminal conserved region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 500.0
PJD2_k127_5791649_1 PFAM glycoside hydrolase family 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001091 272.0
PJD2_k127_5799266_0 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 554.0
PJD2_k127_5799266_1 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000009719 166.0
PJD2_k127_5799266_2 META domain - - - 0.000000000000256 76.0
PJD2_k127_5802041_0 Protein of unknown function (DUF2851) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 452.0
PJD2_k127_5802041_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005799 251.0
PJD2_k127_5802041_2 PFAM OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000004 216.0
PJD2_k127_5802041_3 Maf-like protein K06287 - - 0.0000000000001253 70.0
PJD2_k127_5804686_0 Belongs to the aldehyde dehydrogenase family K10217 - 1.2.1.32,1.2.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 406.0
PJD2_k127_5806903_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006754 339.0
PJD2_k127_5806903_1 COGs COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 342.0
PJD2_k127_5812253_0 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 345.0
PJD2_k127_5812253_1 TIGRFAM gliding motility-associated lipoprotein GldD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000198 237.0
PJD2_k127_5812253_2 Predicted membrane protein (DUF2306) - - - 0.00001147 49.0
PJD2_k127_5822045_0 ribonuclease, Rne Rng family K08301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 449.0
PJD2_k127_5822045_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003751 282.0
PJD2_k127_5822045_2 Belongs to the bacterial histone-like protein family K03530 - - 0.000000000000000000000000000000000000000000000000000006085 193.0
PJD2_k127_5822045_3 - - - - 0.0000003779 53.0
PJD2_k127_5832191_0 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 1.604e-231 724.0
PJD2_k127_5832191_1 Papain family cysteine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 578.0
PJD2_k127_5832191_2 Domain of unknown function (DUF4442) - - - 0.00000000000000000000000000000000000000000000000000000000000001555 219.0
PJD2_k127_5832191_3 Protein of unknown function, DUF255 - - - 0.000000000000000000000000000000000000000000000000000000000167 207.0
PJD2_k127_5838357_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001106 243.0
PJD2_k127_5838357_1 - - - - 0.0000000000000000000000000000000000004681 151.0
PJD2_k127_5839523_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 424.0
PJD2_k127_5839523_1 YceI-like domain - - - 0.0000000000000000000486 104.0
PJD2_k127_5839523_2 YceI-like domain - - - 0.000000000000000001942 99.0
PJD2_k127_5840822_0 COGs COG2192 carbamoyl transferase NodU family K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008927 428.0
PJD2_k127_5840822_1 NAD-dependent epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002442 255.0
PJD2_k127_5844116_0 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 522.0
PJD2_k127_5844116_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 480.0
PJD2_k127_5850669_0 PQQ enzyme repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 530.0
PJD2_k127_5860319_0 ABC-type phosphate transport system periplasmic K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 318.0
PJD2_k127_5860319_1 PFAM Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000001755 213.0
PJD2_k127_5860319_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000149 100.0
PJD2_k127_5861475_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 4.441e-248 771.0
PJD2_k127_5861475_1 Major Facilitator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 352.0
PJD2_k127_5864780_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000002232 218.0
PJD2_k127_5864780_1 TIGRFAM mannose-6-phosphate isomerase, class I K01809 - 5.3.1.8 0.00000000000000000000000000000000000000000000000000003235 193.0
PJD2_k127_5864780_2 - - - - 0.000000000000000000000000000000000000000000000003032 179.0
PJD2_k127_5864780_3 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 0.00000000000000000000000481 102.0
PJD2_k127_5865715_0 gliding motility-associated lipoprotein GldJ - - - 4.961e-232 728.0
PJD2_k127_5865715_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 570.0
PJD2_k127_5865715_2 Protein of unknown function (DUF983) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004855 231.0
PJD2_k127_5865715_3 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000007775 184.0
PJD2_k127_5867395_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 544.0
PJD2_k127_5867395_1 Dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005246 359.0
PJD2_k127_5867395_2 NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 289.0
PJD2_k127_5867395_3 - - - - 0.0000000000000000000000000000001284 135.0
PJD2_k127_5867678_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 8.292e-257 797.0
PJD2_k127_5867678_1 DEAD DEAH box helicase K03724 - - 1.933e-239 749.0
PJD2_k127_5867678_2 leucine binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006613 359.0
PJD2_k127_5873286_0 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 410.0
PJD2_k127_5873286_1 - - - - 0.0000000000000000000000000000000000000000000000000000000001857 211.0
PJD2_k127_587692_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000315 213.0
PJD2_k127_587692_1 L,D-transpeptidase catalytic domain - - - 0.000000000000000002809 87.0
PJD2_k127_5882780_0 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 426.0
PJD2_k127_5882780_1 glycosyl transferase family 2 K07011 - - 0.000000000000000000005552 94.0
PJD2_k127_5883112_0 Oxidoreductase K00184 - - 3e-323 1005.0
PJD2_k127_5888480_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 2.04e-247 781.0
PJD2_k127_5888480_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 458.0
PJD2_k127_589578_0 Methylase involved in ubiquinone menaquinone biosynthesis K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 390.0
PJD2_k127_589578_1 membrane K15270 - - 0.000000000000000000000000000000000000000000000000000000000000689 221.0
PJD2_k127_589578_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000341 162.0
PJD2_k127_589578_3 PFAM Aminotransferase class I and II K14287 - 2.6.1.88 0.0000000000002497 70.0
PJD2_k127_5900834_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1158.0
PJD2_k127_5900834_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 488.0
PJD2_k127_5900834_2 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001042 289.0
PJD2_k127_5914185_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008337 568.0
PJD2_k127_5918824_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009968 409.0
PJD2_k127_5918824_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 359.0
PJD2_k127_5918824_2 Domain of unknown function (DUF5122) beta-propeller - - - 0.00000000000000001768 88.0
PJD2_k127_5926941_0 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 - 4.4.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 464.0
PJD2_k127_5926941_1 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 386.0
PJD2_k127_5932411_0 Motility related/secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 525.0
PJD2_k127_5935411_0 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 415.0
PJD2_k127_5935411_1 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006291 251.0
PJD2_k127_5935411_2 - - - - 0.0000000000000003878 81.0
PJD2_k127_5952899_0 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000000003908 223.0
PJD2_k127_5952899_1 Cytochrome c - - - 0.00000000000000000000000000002205 119.0
PJD2_k127_5954352_0 Peptidase family S41 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 578.0
PJD2_k127_5954352_1 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 446.0
PJD2_k127_5954352_2 COGs COG3279 Response regulator of the LytR AlgR family - - - 0.0000000000000000000000007286 109.0
PJD2_k127_5963089_0 PFAM Glycoside hydrolase, family 77 K00705 - 2.4.1.25 5.517e-283 888.0
PJD2_k127_5964769_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1090.0
PJD2_k127_5967360_0 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 492.0
PJD2_k127_5967360_1 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 323.0
PJD2_k127_5967360_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000007718 139.0
PJD2_k127_598181_0 glycosyltransferase 36 associated K00702,K13688 - 2.4.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 584.0
PJD2_k127_5994132_0 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 537.0
PJD2_k127_5994132_1 Domain of unknown function (DUF4836) - - - 0.0000000006978 70.0
PJD2_k127_5994994_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.181e-301 929.0
PJD2_k127_5994994_1 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000006855 155.0
PJD2_k127_5997640_0 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000000000000000000004981 221.0
PJD2_k127_5997640_1 domain, Protein - - - 0.0000000000000000000002388 97.0
PJD2_k127_5997640_2 PFAM sodium calcium exchanger membrane region K07301 - - 0.00000000003669 65.0
PJD2_k127_6002093_0 Peptidase family C25 - - - 3.477e-214 682.0
PJD2_k127_6013197_0 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000005469 229.0
PJD2_k127_6013197_1 - - - - 0.0003282 49.0
PJD2_k127_6013805_0 heat shock protein 70 K04043,K04044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 448.0
PJD2_k127_6013805_1 methyltransferase - - - 0.0000000003092 62.0
PJD2_k127_6014617_0 GMP synthase-glutamine amidotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 416.0
PJD2_k127_6014617_1 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000006967 109.0
PJD2_k127_6014617_2 Amidohydrolase family - - - 0.000001216 50.0
PJD2_k127_6017414_1 COG3209 Rhs family protein - - - 0.00000000002552 71.0
PJD2_k127_6018657_0 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 448.0
PJD2_k127_6019008_0 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 297.0
PJD2_k127_6019008_1 membrane - - - 0.00000000000000000000000000000000000006728 148.0
PJD2_k127_6023522_0 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 520.0
PJD2_k127_6023522_1 ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004349 434.0
PJD2_k127_6023522_2 PFAM GH3 auxin-responsive promoter - - - 0.000000000000000000000000000000000000002394 148.0
PJD2_k127_6023522_3 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.0000000000000005364 80.0
PJD2_k127_6031002_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 2.243e-231 725.0
PJD2_k127_6031002_1 TIGRFAM ComEC Rec2-related protein K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000334 231.0
PJD2_k127_6031002_2 drug metabolite-transporting permease - - - 0.0000000000000000000000000000000000000000000000000000000001939 208.0
PJD2_k127_6032121_0 Domain of unknown function (DUF4954) - - - 3.245e-277 865.0
PJD2_k127_6033462_0 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005962 418.0
PJD2_k127_6033462_1 - - - - 0.00000000000000000000000000000000005071 137.0
PJD2_k127_6033462_2 Proteolipid membrane potential modulator - - - 0.000316 44.0
PJD2_k127_6043348_0 COG2373 Large extracellular alpha-helical protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 397.0
PJD2_k127_6043348_1 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000009494 166.0
PJD2_k127_6046299_0 protein conserved in bacteria (DUF2179) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 341.0
PJD2_k127_6046299_1 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000634 225.0
PJD2_k127_6046299_2 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000002673 192.0
PJD2_k127_6048181_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 317.0
PJD2_k127_6048181_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 310.0
PJD2_k127_6051652_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 575.0
PJD2_k127_6051752_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004997 383.0
PJD2_k127_6051752_1 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.00000000000000000000000000000000000000000000000000008921 188.0
PJD2_k127_6057237_0 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000665 354.0
PJD2_k127_6057237_1 Glycosyl transferase, family 9 K02843 - - 0.00000000000000000000000001165 110.0
PJD2_k127_6077722_0 Peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000007244 191.0
PJD2_k127_6077722_1 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000000000139 172.0
PJD2_k127_6077722_2 Secretion protein - - - 0.00003106 49.0
PJD2_k127_6080764_0 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006944 274.0
PJD2_k127_6099873_0 Cytochrome C oxidase subunit I K02274 - 1.9.3.1 7.337e-314 966.0
PJD2_k127_6099873_1 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000006086 214.0
PJD2_k127_6099873_2 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000000006484 220.0
PJD2_k127_6099873_3 Cytochrome c K02305,K07152 - - 0.0000000000000000000000000000000000000002563 154.0
PJD2_k127_6127887_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000001376 196.0
PJD2_k127_6127887_1 Lamin Tail Domain - - - 0.00000000000000000000000000000000000000000000000001871 185.0
PJD2_k127_6138166_0 ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K17686 - 3.6.3.54 2.12e-196 624.0
PJD2_k127_6146912_0 Carboxypeptidase regulatory-like domain - - - 7.217e-227 721.0
PJD2_k127_6160859_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 5.383e-320 989.0
PJD2_k127_6160859_1 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000000000000002666 184.0
PJD2_k127_6171082_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 362.0
PJD2_k127_6171082_1 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001134 245.0
PJD2_k127_6171082_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.000000000000000000000000000000001565 132.0
PJD2_k127_618773_0 Glycosyl hydrolases family 2, TIM barrel domain K01190 - 3.2.1.23 2.668e-256 796.0
PJD2_k127_618773_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008845 478.0
PJD2_k127_618773_2 Glycosyl hydrolases family 2, TIM barrel domain K01190 - 3.2.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 383.0
PJD2_k127_618773_3 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008559 334.0
PJD2_k127_618773_4 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001793 267.0
PJD2_k127_618773_5 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000002439 218.0
PJD2_k127_618773_6 Glycosyl hydrolases family 2, TIM barrel domain K01190 - 3.2.1.23 0.0000000004846 59.0
PJD2_k127_618875_0 PFAM Glycosyl hydrolases family 25 K07273 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001884 251.0
PJD2_k127_618875_1 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000000000000000000000005218 183.0
PJD2_k127_6198003_0 Hypothetical methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002333 269.0
PJD2_k127_6198003_1 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008794,GO:0016491,GO:0030611,GO:0030613,GO:0030614,GO:0042221,GO:0046685,GO:0050896,GO:0055114 1.20.4.1 0.0000000000000000000000000000000000001229 143.0
PJD2_k127_6198927_0 homogentisate 12-dioxygenase K00451 - 1.13.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 568.0
PJD2_k127_6198927_2 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.000000000000000000000004965 101.0
PJD2_k127_6202667_0 PFAM PKD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 427.0
PJD2_k127_6202667_1 TonB-dependent receptor K02014,K16087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 379.0
PJD2_k127_6205863_0 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002674 331.0
PJD2_k127_6205863_1 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001512 254.0
PJD2_k127_6205863_2 SnoaL-like domain - - - 0.00000000000000000000000000000000000000009941 153.0
PJD2_k127_6211138_0 exo-alpha-(2->6)-sialidase activity K01387 - 3.4.24.3 0.00000000000000000000000000000000000000000000000000000000000000000001834 245.0
PJD2_k127_6219003_0 Acyl-transferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 376.0
PJD2_k127_6219003_1 PFAM thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002034 273.0
PJD2_k127_6225465_0 Outer membrane protein beta-barrel family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003482 416.0
PJD2_k127_6225465_1 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005479 356.0
PJD2_k127_6225465_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 317.0
PJD2_k127_6233284_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 1.252e-224 700.0
PJD2_k127_6233284_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000005284 89.0
PJD2_k127_6243647_0 N-acetylmuramoyl-L-alanine amidase K01447,K11066 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 334.0
PJD2_k127_6243647_1 Belongs to the DEAD box helicase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002857 257.0
PJD2_k127_6243647_2 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000000000000001829 220.0
PJD2_k127_624546_0 Asparaginase K13051 - 3.4.19.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 416.0
PJD2_k127_624546_1 TamB, inner membrane protein subunit of TAM complex - - - 0.0000000000000001197 83.0
PJD2_k127_6248824_0 RNA polymerase, sigma-54 factor K03092 - - 1.477e-237 742.0
PJD2_k127_6248824_1 SPTR Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 404.0
PJD2_k127_6248824_2 Belongs to the DegT DnrJ EryC1 family K19715 - 2.6.1.109 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 376.0
PJD2_k127_6248824_3 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000456 275.0
PJD2_k127_6248824_4 MBOAT, membrane-bound O-acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000109 203.0
PJD2_k127_6248824_5 Putative beta-lactamase-inhibitor-like, PepSY-like - - - 0.0000003013 60.0
PJD2_k127_6260790_0 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 430.0
PJD2_k127_6260790_1 alcohol dehydrogenase K19714 - 1.1.3.48 0.00000000000000000000000000000000000000000000019 168.0
PJD2_k127_6260790_2 Protein of unknown function (DUF2480) - - - 0.00000000000000000000000000001654 119.0
PJD2_k127_6260790_3 Mediates influx of magnesium ions K03284 - - 0.000000000000000002704 88.0
PJD2_k127_6269909_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 6.16e-234 735.0
PJD2_k127_6269909_1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile K01241 - 3.2.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 445.0
PJD2_k127_6286969_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 1.042e-261 813.0
PJD2_k127_6286969_1 Mandelate racemase muconate lactonizing enzyme K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008236 441.0
PJD2_k127_6286969_2 endonuclease exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 403.0
PJD2_k127_6286969_3 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 316.0
PJD2_k127_6286969_4 PFAM HhH-GPD superfamily base excision DNA repair protein K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 295.0
PJD2_k127_6286969_5 Rhomboid family K09650 - 3.4.21.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003332 276.0
PJD2_k127_6286969_6 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000001232 100.0
PJD2_k127_6289599_0 PFAM NAD dependent epimerase dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005919 561.0
PJD2_k127_6289599_1 2-dehydro-3-deoxyphosphooctonate aldolase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 404.0
PJD2_k127_6289599_2 Two component transcriptional regulator, LuxR family - - - 0.0000000000000699 71.0
PJD2_k127_6291248_0 NADH dehydrogenase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 467.0
PJD2_k127_6291248_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000004197 197.0
PJD2_k127_6293039_0 Carbamoyl-phosphate synthase K01955 - 6.3.5.5 8.942e-226 702.0
PJD2_k127_6293039_1 radical SAM domain protein - - - 0.000003179 53.0
PJD2_k127_6294854_0 SPTR Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07005 - - 0.00000000000000000000000000000000000000000000000001421 185.0
PJD2_k127_6294854_1 response to stress - - - 0.0000000000000000000000000000000000000000001033 168.0
PJD2_k127_6294854_2 COGs COG3467 flavin-nucleotide-binding protein K07005 - - 0.0000000000000000000000000000000002467 136.0
PJD2_k127_6294854_3 - - - - 0.000000000000000000004181 98.0
PJD2_k127_6305440_0 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008574 329.0
PJD2_k127_6305440_1 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004705 326.0
PJD2_k127_6305440_2 Pfam 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000008699 154.0
PJD2_k127_6306528_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 4.975e-224 707.0
PJD2_k127_6310504_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008723 279.0
PJD2_k127_6311104_0 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 467.0
PJD2_k127_6324655_0 S53, subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 454.0
PJD2_k127_6324655_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 428.0
PJD2_k127_6324984_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 326.0
PJD2_k127_6324984_1 PFAM Uncharacterised protein family UPF0029, Impact, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000001337 214.0
PJD2_k127_648083_0 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000471 204.0
PJD2_k127_648083_1 Outer membrane protein beta-barrel domain - - - 0.0000000003624 63.0
PJD2_k127_656598_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 582.0
PJD2_k127_659165_0 Zinc carboxypeptidase - - - 0.0 1127.0
PJD2_k127_659165_1 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001036 256.0
PJD2_k127_659165_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000002115 220.0
PJD2_k127_659165_3 single-stranded DNA-binding protein K03111 - - 0.00000000000000000000000000000000000000000000000000000000008895 207.0
PJD2_k127_660602_0 TonB dependent receptor K16087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 348.0
PJD2_k127_660602_1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007508 329.0
PJD2_k127_660602_3 PepSY-associated TM region K09939 - - 0.000000000000000000000000000000000000000000000000000000001658 206.0
PJD2_k127_662315_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 4.157e-214 668.0
PJD2_k127_662315_1 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 404.0
PJD2_k127_662315_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000001281 121.0
PJD2_k127_6682_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007115 486.0
PJD2_k127_670373_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000568 347.0
PJD2_k127_670373_1 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 324.0
PJD2_k127_670373_2 - - - - 0.0000000000000000000000006394 106.0
PJD2_k127_67552_0 Mate efflux family protein K03327 - - 0.00000000000000000000000000000000000000000000000000002799 194.0
PJD2_k127_67552_1 PFAM Peptidase, C-terminal, archaeal bacterial - - - 0.00001043 51.0
PJD2_k127_688884_0 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 537.0
PJD2_k127_688884_1 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001101 283.0
PJD2_k127_688884_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000005292 222.0
PJD2_k127_688884_3 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000009586 145.0
PJD2_k127_691788_0 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004046 592.0
PJD2_k127_695834_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 1.49e-209 659.0
PJD2_k127_695834_1 belongs to the thioredoxin family - - - 0.0000000000000000000000000006774 121.0
PJD2_k127_700463_0 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000001034 175.0
PJD2_k127_700463_1 PFAM NlpC P60 family - - - 0.000000000000000000000000000000000000000000001114 171.0
PJD2_k127_700463_2 membrane transporter protein K07090 - - 0.000000000000000000000000000002628 126.0
PJD2_k127_701361_0 Large extracellular alpha-helical protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 402.0
PJD2_k127_701361_1 - - - - 0.00000001929 56.0
PJD2_k127_701562_0 PFAM sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 373.0
PJD2_k127_706561_0 DNA polymerase K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 330.0
PJD2_k127_706561_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000001261 153.0
PJD2_k127_720974_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 532.0
PJD2_k127_720974_1 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003668 256.0
PJD2_k127_720974_2 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000000000000000002725 215.0
PJD2_k127_720974_3 TIGRFAM Gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.00000000000000000000000000000000000000000000000000000000000005219 216.0
PJD2_k127_724511_0 COGs COG4775 Outer membrane protein protective antigen OMA87 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 477.0
PJD2_k127_733591_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 539.0
PJD2_k127_733591_1 Belongs to the aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 291.0
PJD2_k127_741455_0 Belongs to the aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 1.37e-207 648.0
PJD2_k127_746514_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 462.0
PJD2_k127_746514_1 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000002524 177.0
PJD2_k127_746514_2 HSCB C-terminal oligomerisation domain K04082 - - 0.00000000000000000000000000000000000000000007278 165.0
PJD2_k127_746514_3 PFAM Phosphoesterase, HXTX - - - 0.000000000000000000000000000000000003432 143.0
PJD2_k127_746514_4 Sigma-70 region 2 - - - 0.00008456 46.0
PJD2_k127_750259_0 membrane protein involved in aromatic hydrocarbon degradation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 310.0
PJD2_k127_750259_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000007615 124.0
PJD2_k127_751941_0 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 409.0
PJD2_k127_751941_1 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 343.0
PJD2_k127_753762_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009138 272.0
PJD2_k127_753762_1 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000001204 214.0
PJD2_k127_763543_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1176.0
PJD2_k127_767396_0 Zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 386.0
PJD2_k127_767396_1 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 296.0
PJD2_k127_767396_2 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000001648 228.0
PJD2_k127_768438_0 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 297.0
PJD2_k127_768438_1 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000000004652 226.0
PJD2_k127_768438_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000003396 132.0
PJD2_k127_77179_0 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000009167 252.0
PJD2_k127_77179_1 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000001294 215.0
PJD2_k127_774442_0 Belongs to the SUA5 family K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000008811 255.0
PJD2_k127_774442_1 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000001022 219.0
PJD2_k127_774442_2 PFAM Glycosyl transferase, group 1 - - - 0.000000152 55.0
PJD2_k127_776715_0 Peptidase family M1 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 552.0
PJD2_k127_776715_1 Peptidase family M1 domain - - - 0.0000000000000221 74.0
PJD2_k127_780094_0 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005003 578.0
PJD2_k127_780094_1 - - - - 0.00000001397 59.0
PJD2_k127_793377_0 PFAM Zinc carboxypeptidase - - - 7.151e-291 912.0
PJD2_k127_793377_1 LmbE family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005623 284.0
PJD2_k127_796086_0 TonB-dependent receptor - - - 8.498e-254 801.0
PJD2_k127_817673_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 518.0
PJD2_k127_817673_1 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000001039 147.0
PJD2_k127_818611_0 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000001591 200.0
PJD2_k127_826711_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000004711 164.0
PJD2_k127_826711_1 Belongs to the peptidase M48B family - - - 0.00000000000000000000000000000000000000002124 165.0
PJD2_k127_826711_2 Late embryogenesis abundant protein - - - 0.00000000000000002591 88.0
PJD2_k127_82790_0 Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 289.0
PJD2_k127_82790_2 divalent heavy-metal cations transporter K07238 - - 0.0000000000006261 70.0
PJD2_k127_834397_0 competence protein COMEC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 397.0
PJD2_k127_834397_1 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000119 63.0
PJD2_k127_848408_0 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 1.8e-254 794.0
PJD2_k127_848408_1 Peptidase family M1 domain - - - 6.527e-206 658.0
PJD2_k127_848408_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000008131 77.0
PJD2_k127_848408_3 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.00000000001376 66.0
PJD2_k127_8496_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 9.552e-256 798.0
PJD2_k127_8496_1 Beta-eliminating lyase - - - 1.005e-243 759.0
PJD2_k127_8496_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 344.0
PJD2_k127_8496_3 - - - - 0.00000000000000000000000000000000000000008806 154.0
PJD2_k127_852013_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007347 324.0
PJD2_k127_852013_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000001672 216.0
PJD2_k127_86209_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1179.0
PJD2_k127_864196_0 FAD binding domain - - - 3.568e-199 631.0
PJD2_k127_867311_0 Putative porin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 502.0
PJD2_k127_867311_1 - - - - 0.0000000008037 64.0
PJD2_k127_875892_0 Phospholipase D. Active site motifs. K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004234 351.0
PJD2_k127_875892_1 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003808 263.0
PJD2_k127_875892_2 - - - - 0.000000000000004827 82.0
PJD2_k127_875892_3 - - - - 0.00000000000007797 73.0
PJD2_k127_885628_0 Putative auto-transporter adhesin, head GIN domain - - - 0.0000000000000000000000000000000000000000000006312 174.0
PJD2_k127_885628_1 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000006642 93.0
PJD2_k127_893519_0 alginic acid biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 422.0
PJD2_k127_893545_0 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 396.0
PJD2_k127_893545_1 GH3 auxin-responsive promoter - - - 0.000000000000000000000000000000000003495 138.0
PJD2_k127_893545_2 enoyl-CoA hydratase K13766 - 4.2.1.18 0.00000000000004815 72.0
PJD2_k127_893545_3 - - - - 0.00000004591 61.0
PJD2_k127_893545_4 - - - - 0.000003041 56.0
PJD2_k127_896612_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 531.0
PJD2_k127_896612_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 295.0
PJD2_k127_896612_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000001093 245.0
PJD2_k127_896612_3 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.000001606 50.0
PJD2_k127_902266_0 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 2.232e-194 617.0
PJD2_k127_902266_1 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000001934 246.0
PJD2_k127_902266_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000002995 76.0
PJD2_k127_903613_0 COG0308 Aminopeptidase N - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 494.0
PJD2_k127_903754_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1208.0
PJD2_k127_903754_1 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001071 271.0
PJD2_k127_913778_0 peptidase M42 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 443.0
PJD2_k127_913778_1 protein methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 415.0
PJD2_k127_9141_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 472.0
PJD2_k127_9141_2 - - - - 0.0000000000000000000000000000000000000000000000000005393 193.0
PJD2_k127_914352_0 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 293.0
PJD2_k127_914352_1 CarboxypepD_reg-like domain K02014,K16089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003579 240.0
PJD2_k127_923395_0 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 427.0
PJD2_k127_923395_1 1-aminocyclopropane-1-carboxylate deaminase K01505 - 3.5.99.7 0.0000000000000000000000000000000000000000000000000000000000000000000000001884 257.0
PJD2_k127_923395_2 peptidase S1 and S6 chymotrypsin Hap - - - 0.00000000000000000000000000005561 118.0
PJD2_k127_924217_0 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 4.961e-320 989.0
PJD2_k127_925169_0 Catalyzes the conversion of dihydroorotate to orotate K00226,K17723 - 1.3.1.1,1.3.98.1 2.743e-254 786.0
PJD2_k127_925169_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266,K17722 - 1.3.1.1,1.4.1.13,1.4.1.14 0.00000000001409 64.0
PJD2_k127_926374_0 RNA methyltransferase, RsmD K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006765 282.0
PJD2_k127_926374_1 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000000000009002 202.0
PJD2_k127_932226_0 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 359.0
PJD2_k127_932226_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000002392 103.0
PJD2_k127_933597_0 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 426.0
PJD2_k127_933597_1 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 295.0
PJD2_k127_933597_2 Domain of unknown function (DUF4271) - - - 0.00000000000000000000000000000000000004754 147.0
PJD2_k127_935462_0 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000384 374.0
PJD2_k127_935462_1 Oxidoreductase domain protein K16044 - 1.1.1.371 0.000000000000000000000000000000000000000000000000000000000000000000005374 239.0
PJD2_k127_944001_0 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 430.0
PJD2_k127_945134_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 403.0
PJD2_k127_945134_1 Signal transduction response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 366.0
PJD2_k127_945134_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 323.0
PJD2_k127_945134_3 NmrA-like family - - - 0.000000000000000000000000000000000007972 139.0
PJD2_k127_945134_4 Two component regulator propeller - - - 0.0000002369 57.0
PJD2_k127_948666_0 PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - 0.0000000000000000000000000000000000000000000000000000000000002332 223.0
PJD2_k127_948666_1 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000006336 143.0
PJD2_k127_95341_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1357.0
PJD2_k127_95341_1 CHRD domain - - - 0.00000000003904 68.0
PJD2_k127_955663_0 Aldehyde dehydrogenase family K00140,K22187 - 1.2.1.18,1.2.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 307.0
PJD2_k127_955663_1 Aminotransferase class-III K15372 - 2.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 297.0
PJD2_k127_955894_0 Endonuclease exonuclease phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 419.0
PJD2_k127_955894_1 TonB-dependent receptor - - - 0.00000000000000000000000002206 113.0
PJD2_k127_956983_0 COG2373 Large extracellular alpha-helical protein - - - 0.00000000000000000000000000000000000000000000000000001099 210.0
PJD2_k127_957140_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.939e-242 753.0
PJD2_k127_957140_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000002585 188.0
PJD2_k127_95885_0 polysaccharide deacetylase K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 605.0
PJD2_k127_960746_0 TonB-dependent receptor K16089 - - 1.864e-229 730.0
PJD2_k127_960746_1 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000001022 164.0
PJD2_k127_961940_0 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008671 469.0
PJD2_k127_961940_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000008457 162.0
PJD2_k127_966339_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003092 263.0
PJD2_k127_966339_1 Cytochrome c - - - 0.00000000000000000000000000003392 121.0
PJD2_k127_97009_0 Domain of unknown function (DUF5117) - - - 2e-323 1007.0
PJD2_k127_97009_1 Glycosyltransferase family 17 K00737 - 2.4.1.144 0.00000000000000000000000000000000000000000001293 173.0
PJD2_k127_976454_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 375.0
PJD2_k127_979268_0 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008055 515.0
PJD2_k127_979268_1 Orotidine 5''-phosphate decarboxylase K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 369.0
PJD2_k127_979268_2 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 312.0
PJD2_k127_983560_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008759 368.0
PJD2_k127_983560_1 peptidase K03427 - 2.1.1.72 0.00001888 50.0