Overview

ID MAG02927
Name PJD3_bin.16
Sample SMP0069
Taxonomy
Kingdom Bacteria
Phylum Bdellovibrionota
Class Bacteriovoracia
Order Bacteriovoracales
Family Bacteriovoracaceae
Genus Halobacteriovorax_A
Species
Assembly information
Completeness (%) 99.82
Contamination (%) 0.87
GC content (%) 33.0
N50 (bp) 97,745
Genome size (bp) 3,487,772

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2519

Gene name Description KEGG GOs EC E-value Score Sequence
PJD3_k127_1035581_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1259.0
PJD3_k127_1035581_1 Chloride channel K03281 - - 1.507e-317 979.0
PJD3_k127_1035581_10 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 334.0
PJD3_k127_1035581_11 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 341.0
PJD3_k127_1035581_12 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001764 268.0
PJD3_k127_1035581_13 RDD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001343 265.0
PJD3_k127_1035581_14 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002279 256.0
PJD3_k127_1035581_15 GAF domain K08968 - 1.8.4.14 0.0000000000000000000000000000000000000000000000000000000000001471 216.0
PJD3_k127_1035581_16 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000000000001255 204.0
PJD3_k127_1035581_18 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000000000000000003727 162.0
PJD3_k127_1035581_2 Tetratricopeptide repeat - - - 5.139e-301 949.0
PJD3_k127_1035581_3 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.42e-290 896.0
PJD3_k127_1035581_4 FHA domain - - - 4.66e-241 760.0
PJD3_k127_1035581_5 Tetratricopeptide repeat - - - 3.376e-199 630.0
PJD3_k127_1035581_7 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 374.0
PJD3_k127_1035581_8 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 353.0
PJD3_k127_1119644_0 hydrolase of the alpha beta-hydrolase fold K07019 - - 0.00000000000000000000000000000000000003679 144.0
PJD3_k127_1132379_1 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000005541 75.0
PJD3_k127_1191201_0 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 581.0
PJD3_k127_1191201_1 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 530.0
PJD3_k127_1191201_2 Glycosyl transferase, family 2 K16555,K16564 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004564 295.0
PJD3_k127_1191201_3 Glycosyl transferases group 1 K13004,K21011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009185 297.0
PJD3_k127_1191201_4 Bacterial sugar transferase K13012 - - 0.0000000000000000000000000000000000000000000000000000000000006468 215.0
PJD3_k127_1191201_5 - - - - 0.0000000000000000006535 100.0
PJD3_k127_1191201_6 polysaccharide biosynthetic process - - - 0.00000000000000007373 88.0
PJD3_k127_1283727_0 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0 1235.0
PJD3_k127_1283727_1 Belongs to the peptidase M16 family K07263 - - 0.0 1175.0
PJD3_k127_1283727_10 FHA domain - - - 1.514e-236 752.0
PJD3_k127_1283727_11 Na H antiporter K03315 - - 1.206e-224 706.0
PJD3_k127_1283727_12 Cell shape determining protein MreB Mrl K03569 - - 1.205e-209 653.0
PJD3_k127_1283727_13 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 606.0
PJD3_k127_1283727_14 Flp pilus assembly protein K12511 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009812 597.0
PJD3_k127_1283727_15 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009064 580.0
PJD3_k127_1283727_16 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 552.0
PJD3_k127_1283727_17 PFAM glycoside hydrolase, family 3 domain protein K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003346 548.0
PJD3_k127_1283727_19 Phosphorylase superfamily K01241 - 3.2.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003482 516.0
PJD3_k127_1283727_2 Heat shock 70 kDa protein K04043 - - 0.0 1127.0
PJD3_k127_1283727_20 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004776 512.0
PJD3_k127_1283727_21 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 492.0
PJD3_k127_1283727_22 LAO AO transport system ATPase K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 446.0
PJD3_k127_1283727_23 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 437.0
PJD3_k127_1283727_24 FHA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 421.0
PJD3_k127_1283727_25 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 410.0
PJD3_k127_1283727_26 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 401.0
PJD3_k127_1283727_27 Binding-protein-dependent transport system inner membrane component K02033,K15581 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 405.0
PJD3_k127_1283727_28 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 401.0
PJD3_k127_1283727_3 PFAM carboxyl transferase K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 5e-323 991.0
PJD3_k127_1283727_30 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 374.0
PJD3_k127_1283727_31 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 357.0
PJD3_k127_1283727_32 Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 351.0
PJD3_k127_1283727_33 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 328.0
PJD3_k127_1283727_34 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 318.0
PJD3_k127_1283727_35 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008692 314.0
PJD3_k127_1283727_36 protein serine/threonine phosphatase activity K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 313.0
PJD3_k127_1283727_37 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 310.0
PJD3_k127_1283727_38 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 328.0
PJD3_k127_1283727_39 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002156 279.0
PJD3_k127_1283727_4 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 1.741e-296 914.0
PJD3_k127_1283727_40 Biotin-requiring enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002235 276.0
PJD3_k127_1283727_41 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001496 273.0
PJD3_k127_1283727_43 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002634 267.0
PJD3_k127_1283727_45 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003034 257.0
PJD3_k127_1283727_46 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000493 259.0
PJD3_k127_1283727_47 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000015 252.0
PJD3_k127_1283727_48 biotin-[acetyl-CoA-carboxylase] ligase activity K03523,K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000356 247.0
PJD3_k127_1283727_49 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009556 256.0
PJD3_k127_1283727_5 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 1.836e-296 912.0
PJD3_k127_1283727_50 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000001068 233.0
PJD3_k127_1283727_51 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000001574 231.0
PJD3_k127_1283727_52 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000006731 229.0
PJD3_k127_1283727_53 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000003639 231.0
PJD3_k127_1283727_54 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000005079 226.0
PJD3_k127_1283727_55 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000003883 209.0
PJD3_k127_1283727_56 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000004636 205.0
PJD3_k127_1283727_57 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000002562 200.0
PJD3_k127_1283727_58 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01838 - 5.4.2.6 0.00000000000000000000000000000000000000000000000000000003463 203.0
PJD3_k127_1283727_59 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000004152 195.0
PJD3_k127_1283727_6 ABC-type branched-chain amino acid transport K07121 - - 2.416e-283 884.0
PJD3_k127_1283727_60 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000007006 187.0
PJD3_k127_1283727_61 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000000000001838 179.0
PJD3_k127_1283727_62 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000000000000000000002622 165.0
PJD3_k127_1283727_63 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000012 160.0
PJD3_k127_1283727_64 radical SAM domain protein - - - 0.000000000000000000000000000000000000000002743 170.0
PJD3_k127_1283727_65 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.0000000000000000000000000000000000002496 140.0
PJD3_k127_1283727_66 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000009384 139.0
PJD3_k127_1283727_67 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000000000001972 126.0
PJD3_k127_1283727_68 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000004353 135.0
PJD3_k127_1283727_69 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000004715 107.0
PJD3_k127_1283727_7 FHA domain - - - 6.078e-276 854.0
PJD3_k127_1283727_70 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000009841 106.0
PJD3_k127_1283727_71 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000004866 90.0
PJD3_k127_1283727_72 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000001759 73.0
PJD3_k127_1283727_73 - - - - 0.0000000000001419 78.0
PJD3_k127_1283727_74 COG1651 Protein-disulfide isomerase - - - 0.000000000008581 76.0
PJD3_k127_1283727_75 Alpha/beta hydrolase family K06889 - - 0.000000237 53.0
PJD3_k127_1283727_76 PFAM Radical SAM domain protein - - - 0.00002155 57.0
PJD3_k127_1283727_8 ABC1 family - - - 1.404e-262 824.0
PJD3_k127_1283727_9 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 9.135e-250 774.0
PJD3_k127_1340694_0 guanyl-nucleotide exchange factor activity K01176,K01179,K20276,K21429 - 3.2.1.1,3.2.1.4 0.0 2613.0
PJD3_k127_1340694_1 - - - - 0.0 1769.0
PJD3_k127_1340694_10 GTP cyclohydrolase N terminal - - - 1.433e-256 793.0
PJD3_k127_1340694_11 ABC transporter transmembrane region K18890 - - 4.903e-255 797.0
PJD3_k127_1340694_12 - - - - 1.282e-246 766.0
PJD3_k127_1340694_15 belongs to the aldehyde dehydrogenase family - - - 5.071e-221 694.0
PJD3_k127_1340694_16 Xanthine dehydrogenase K00106,K13482 - 1.17.1.4,1.17.3.2 1.361e-220 708.0
PJD3_k127_1340694_17 Protein of unknown function (DUF1688) - - - 2.178e-211 661.0
PJD3_k127_1340694_18 response regulator K02282 - - 7.346e-211 662.0
PJD3_k127_1340694_19 Belongs to the DegT DnrJ EryC1 family - - - 2.587e-206 645.0
PJD3_k127_1340694_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1560.0
PJD3_k127_1340694_20 RmuC family K09760 - - 8.583e-203 637.0
PJD3_k127_1340694_21 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 2.719e-198 626.0
PJD3_k127_1340694_22 Deoxyhypusine synthase K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008755 594.0
PJD3_k127_1340694_23 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 584.0
PJD3_k127_1340694_24 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 572.0
PJD3_k127_1340694_25 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 543.0
PJD3_k127_1340694_26 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 531.0
PJD3_k127_1340694_27 cellular protein modification process K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 500.0
PJD3_k127_1340694_28 CO dehydrogenase flavoprotein C-terminal domain K13481 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 466.0
PJD3_k127_1340694_29 thiolester hydrolase activity K02170,K07002 - 3.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 445.0
PJD3_k127_1340694_3 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1066.0
PJD3_k127_1340694_30 zn-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004733 432.0
PJD3_k127_1340694_32 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 411.0
PJD3_k127_1340694_33 PFAM Sodium sulphate symporter K14445 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 394.0
PJD3_k127_1340694_34 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 376.0
PJD3_k127_1340694_35 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 370.0
PJD3_k127_1340694_36 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 368.0
PJD3_k127_1340694_37 Iron-sulfur K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 370.0
PJD3_k127_1340694_38 spore germination K03298 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 360.0
PJD3_k127_1340694_39 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009614 356.0
PJD3_k127_1340694_4 ABC transporter transmembrane region K06147 - - 1.887e-317 979.0
PJD3_k127_1340694_40 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 343.0
PJD3_k127_1340694_41 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 336.0
PJD3_k127_1340694_42 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 330.0
PJD3_k127_1340694_43 Belongs to the uridine kinase family K00855,K00876 - 2.7.1.19,2.7.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 329.0
PJD3_k127_1340694_44 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007337 329.0
PJD3_k127_1340694_45 Domains in Na-Ca exchangers and integrin-beta4 K01406 - 3.4.24.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 350.0
PJD3_k127_1340694_46 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 310.0
PJD3_k127_1340694_47 NYN domain K06860 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007432 287.0
PJD3_k127_1340694_48 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001318 280.0
PJD3_k127_1340694_49 YceI-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009068 283.0
PJD3_k127_1340694_5 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 5.799e-313 964.0
PJD3_k127_1340694_50 Amino acid ABC transporter substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001755 263.0
PJD3_k127_1340694_51 glutathione oxidoreductase activity K03675 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0015036,GO:0015037,GO:0015038,GO:0016491,GO:0016667,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.000000000000000000000000000000000000000000000000000000000000000000000000004396 258.0
PJD3_k127_1340694_52 addiction module antidote protein HigA K07727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002991 254.0
PJD3_k127_1340694_53 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001356 245.0
PJD3_k127_1340694_54 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001462 250.0
PJD3_k127_1340694_55 Phospholipase/Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000002024 235.0
PJD3_k127_1340694_56 deoxyribonuclease I activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000002113 237.0
PJD3_k127_1340694_58 XdhC Rossmann domain K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000007179 228.0
PJD3_k127_1340694_59 Putative inner membrane exporter, YdcZ K09936 - - 0.00000000000000000000000000000000000000000000000000000000000001083 218.0
PJD3_k127_1340694_6 phospholipid glycerol acyltransferase K05939 - 2.3.1.40,6.2.1.20 3.42e-307 952.0
PJD3_k127_1340694_60 PFAM TM2 domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000001216 217.0
PJD3_k127_1340694_63 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.00000000000000000000000000000000000000000000000000000000006392 214.0
PJD3_k127_1340694_64 Protein of unknown function (DUF962) - - - 0.0000000000000000000000000000000000000000000000000000000003143 205.0
PJD3_k127_1340694_65 Cbs domain K07182 - - 0.000000000000000000000000000000000000000000000000000000007047 202.0
PJD3_k127_1340694_66 protein histidine kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000316 204.0
PJD3_k127_1340694_67 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969,K03574 - 2.7.7.18,3.6.1.55 0.0000000000000000000000000000000000000000000000000000001633 203.0
PJD3_k127_1340694_68 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000006494 198.0
PJD3_k127_1340694_69 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000005126 191.0
PJD3_k127_1340694_7 cytochrome C peroxidase - - - 4.845e-285 883.0
PJD3_k127_1340694_70 2OG-Fe(II) oxygenase superfamily K07336,K07394 - - 0.0000000000000000000000000000000000000000000000000000368 191.0
PJD3_k127_1340694_71 HAD superfamily, subfamily IIIB (Acid phosphatase) - - - 0.0000000000000000000000000000000000000000000000001078 180.0
PJD3_k127_1340694_72 DoxX K15977 - - 0.000000000000000000000000000000000000000000000001439 175.0
PJD3_k127_1340694_73 Export-related chaperone CsaA K06878 GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000005041 162.0
PJD3_k127_1340694_74 response regulator, receiver K03413 - - 0.0000000000000000000000000000000000000000004445 160.0
PJD3_k127_1340694_77 2OG-Fe(II) oxygenase K07394 - - 0.00000000000000000000000000000000000003892 150.0
PJD3_k127_1340694_78 addiction module antidote protein HigA K07727 - - 0.000000000000000000000000000000000000774 148.0
PJD3_k127_1340694_79 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A - - - 0.00000000000000000000000000000000318 134.0
PJD3_k127_1340694_8 PLD-like domain - - - 8.707e-282 878.0
PJD3_k127_1340694_80 - - - - 0.00000000000000000000000000000001105 128.0
PJD3_k127_1340694_81 protein heterodimerization activity - - - 0.00000000000000000000000000000002347 128.0
PJD3_k127_1340694_82 Fe-S-cluster oxidoreductase K06940 - - 0.0000000000000000000000000000001968 128.0
PJD3_k127_1340694_83 multidrug efflux family K06147 - - 0.000000000000000000000000000003177 137.0
PJD3_k127_1340694_89 Thrombospondin type 1 repeats - - - 0.00000000000000000000007317 112.0
PJD3_k127_1340694_9 methylmalonate-semialdehyde dehydrogenase K00140 - 1.2.1.18,1.2.1.27 2.11e-269 835.0
PJD3_k127_1340694_90 transposition K07497 - - 0.00000000000002689 85.0
PJD3_k127_1340694_92 Kazal type serine protease inhibitors - - - 0.000000001154 62.0
PJD3_k127_1340694_95 Glutathione-dependent formaldehyde-activating - - - 0.0000004119 54.0
PJD3_k127_1340694_99 nucleotide phosphatase activity, acting on free nucleotides K00943,K02013,K02017,K03574,K03752,K06928 - 2.7.4.9,2.7.7.77,3.6.1.15,3.6.1.55,3.6.3.29,3.6.3.34 0.00001163 56.0
PJD3_k127_1374058_1 - K07090 - - 0.0000000000000000000000000001256 124.0
PJD3_k127_1374058_2 sequence-specific DNA binding - - - 0.000000000000000000000000002451 115.0
PJD3_k127_1415176_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1691.0
PJD3_k127_1415176_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1323.0
PJD3_k127_1415176_10 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 1.954e-238 741.0
PJD3_k127_1415176_102 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000006124 79.0
PJD3_k127_1415176_11 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 1.482e-215 681.0
PJD3_k127_1415176_12 Belongs to the EPSP synthase family. MurA subfamily K00790 - 2.5.1.7 4.185e-213 667.0
PJD3_k127_1415176_13 chemotaxis protein - - - 2.982e-208 667.0
PJD3_k127_1415176_14 flagellar motor switch protein FliM K02416 - - 1.959e-202 632.0
PJD3_k127_1415176_15 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 1.454e-197 619.0
PJD3_k127_1415176_16 PFAM GTP-binding signal recognition particle SRP54 G- domain K02404 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000747 595.0
PJD3_k127_1415176_17 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 587.0
PJD3_k127_1415176_18 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 559.0
PJD3_k127_1415176_19 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 561.0
PJD3_k127_1415176_2 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1221.0
PJD3_k127_1415176_20 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 557.0
PJD3_k127_1415176_21 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008756 550.0
PJD3_k127_1415176_22 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009594 538.0
PJD3_k127_1415176_23 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 511.0
PJD3_k127_1415176_24 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 506.0
PJD3_k127_1415176_26 D-isomer specific 2-hydroxyacid dehydrogenase K00058,K16843 - 1.1.1.310,1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 491.0
PJD3_k127_1415176_27 - K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 501.0
PJD3_k127_1415176_29 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 482.0
PJD3_k127_1415176_3 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0 1067.0
PJD3_k127_1415176_30 Stage II sporulation D domain protein K06381 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 477.0
PJD3_k127_1415176_31 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 464.0
PJD3_k127_1415176_32 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 463.0
PJD3_k127_1415176_33 Virulence factor BrkB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003028 451.0
PJD3_k127_1415176_34 efflux transmembrane transporter activity K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 459.0
PJD3_k127_1415176_35 flagellar K02418 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 426.0
PJD3_k127_1415176_36 flagellar biosynthetic protein FliR K02421 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000065 418.0
PJD3_k127_1415176_37 Glutamine amidotransferases class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 414.0
PJD3_k127_1415176_38 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 413.0
PJD3_k127_1415176_39 GHKL domain K07709,K19694 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 417.0
PJD3_k127_1415176_4 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0 1002.0
PJD3_k127_1415176_40 Belongs to the ParA family K04562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 407.0
PJD3_k127_1415176_41 Plays a role in the flagellum-specific transport system K02419 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 399.0
PJD3_k127_1415176_42 TIGRFAM MazG family protein K02499,K04765 - 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 400.0
PJD3_k127_1415176_43 PFAM DSBA oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008527 398.0
PJD3_k127_1415176_44 PFAM oxidoreductase domain protein K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 396.0
PJD3_k127_1415176_45 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006687 392.0
PJD3_k127_1415176_46 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 376.0
PJD3_k127_1415176_48 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 350.0
PJD3_k127_1415176_49 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 344.0
PJD3_k127_1415176_50 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 341.0
PJD3_k127_1415176_51 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 328.0
PJD3_k127_1415176_52 MafB19-like deaminase K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009719 312.0
PJD3_k127_1415176_53 Putative zinc- or iron-chelating domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 310.0
PJD3_k127_1415176_54 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 308.0
PJD3_k127_1415176_56 Histidine kinase K07709,K13924 - 2.1.1.80,2.7.13.3,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 308.0
PJD3_k127_1415176_57 Dtw domain containing protein K05812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007179 295.0
PJD3_k127_1415176_58 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009381 289.0
PJD3_k127_1415176_59 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 282.0
PJD3_k127_1415176_6 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 5.166e-266 832.0
PJD3_k127_1415176_60 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001401 275.0
PJD3_k127_1415176_62 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000307 258.0
PJD3_k127_1415176_64 Scramblase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003421 263.0
PJD3_k127_1415176_66 PFAM Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000006 233.0
PJD3_k127_1415176_67 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000000000000000000000000000000000002979 230.0
PJD3_k127_1415176_68 PFAM outer membrane chaperone Skp (OmpH) K06142 - - 0.00000000000000000000000000000000000000000000000000000000000000008747 225.0
PJD3_k127_1415176_69 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000002585 230.0
PJD3_k127_1415176_7 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.09e-251 779.0
PJD3_k127_1415176_70 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000531 222.0
PJD3_k127_1415176_72 deaminated base DNA N-glycosylase activity K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000001708 227.0
PJD3_k127_1415176_73 PFAM regulatory protein TetR K09017 - - 0.0000000000000000000000000000000000000000000000000000000000001634 218.0
PJD3_k127_1415176_76 Flagellar motor switch protein FliN K02417 - - 0.000000000000000000000000000000000000000000000000000000000001151 210.0
PJD3_k127_1415176_78 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000000000000000000000000000000000000000000000005328 211.0
PJD3_k127_1415176_79 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000005659 207.0
PJD3_k127_1415176_8 SMART Elongator protein 3 MiaB NifB K18707 - 2.8.4.5 4.446e-245 760.0
PJD3_k127_1415176_80 - - - - 0.00000000000000000000000000000000000000000000000000001308 192.0
PJD3_k127_1415176_81 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000001103 184.0
PJD3_k127_1415176_82 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000007093 192.0
PJD3_k127_1415176_83 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.00000000000000000000000000000000000000000000000009508 179.0
PJD3_k127_1415176_85 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000000000000000000000006022 164.0
PJD3_k127_1415176_86 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.000000000000000000000000000000000000000000007231 171.0
PJD3_k127_1415176_87 protein transport across the cell outer membrane K02453,K02666 - - 0.000000000000000000000000000000000000000000009894 170.0
PJD3_k127_1415176_88 Peptidyl-prolyl cis-trans isomerase K01802,K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000004156 158.0
PJD3_k127_1415176_9 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 6.866e-244 756.0
PJD3_k127_1415176_90 Flagellar biosynthetic protein FliQ K02420,K03227 - - 0.00000000000000000000000000000000000000002667 153.0
PJD3_k127_1415176_91 ArsC family - - - 0.00000000000000000000000000000000000000003045 154.0
PJD3_k127_1415176_93 branched-chain-amino-acid transaminase activity K00826,K01665,K02619,K03342 - 2.6.1.42,2.6.1.85,4.1.3.38 0.0000000000000000000000000000000000003598 150.0
PJD3_k127_1415176_95 COG3209 Rhs family protein - - - 0.0000000000000000000000000000000008221 144.0
PJD3_k127_1444714_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1570.0
PJD3_k127_1444714_1 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.0 1353.0
PJD3_k127_1444714_10 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 558.0
PJD3_k127_1444714_11 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 539.0
PJD3_k127_1444714_12 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 477.0
PJD3_k127_1444714_13 peptidyl-prolyl cis-trans isomerase activity K03769,K03771 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0022607,GO:0030288,GO:0030313,GO:0031647,GO:0031975,GO:0033218,GO:0036211,GO:0042277,GO:0042597,GO:0043163,GO:0043165,GO:0043170,GO:0043412,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0044764,GO:0045229,GO:0050821,GO:0051082,GO:0051084,GO:0051085,GO:0051704,GO:0060274,GO:0061024,GO:0061077,GO:0065007,GO:0065008,GO:0071704,GO:0071709,GO:0071840,GO:0140096,GO:1901564 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 434.0
PJD3_k127_1444714_14 peptidyl-prolyl isomerase K03769,K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 428.0
PJD3_k127_1444714_15 Alg9-like mannosyltransferase family K05286 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 384.0
PJD3_k127_1444714_16 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006024 355.0
PJD3_k127_1444714_17 PFAM UBA THIF-type NAD FAD binding protein K22132 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344 343.0
PJD3_k127_1444714_18 rRNA methyltransferase K03437 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 330.0
PJD3_k127_1444714_19 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 328.0
PJD3_k127_1444714_2 HemY protein K20543 - - 0.0 1135.0
PJD3_k127_1444714_20 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 327.0
PJD3_k127_1444714_21 sequence-specific DNA binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008209 295.0
PJD3_k127_1444714_22 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001993 270.0
PJD3_k127_1444714_23 PFAM NADH-ubiquinone plastoquinone oxidoreductase, chain 6 K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001347 268.0
PJD3_k127_1444714_24 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001665 257.0
PJD3_k127_1444714_25 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000000002455 223.0
PJD3_k127_1444714_27 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000005729 219.0
PJD3_k127_1444714_28 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000001658 224.0
PJD3_k127_1444714_29 Aldose 1-epimerase K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000001177 209.0
PJD3_k127_1444714_3 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 2.023e-294 907.0
PJD3_k127_1444714_30 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000000000000000000001748 163.0
PJD3_k127_1444714_31 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000001059 162.0
PJD3_k127_1444714_32 - - - - 0.00000000000000000000000000000004427 130.0
PJD3_k127_1444714_35 - - - - 0.00000000000000000000183 97.0
PJD3_k127_1444714_36 - - - - 0.0000000000000092 77.0
PJD3_k127_1444714_38 - - - - 0.000003537 50.0
PJD3_k127_1444714_39 - - - - 0.000004425 49.0
PJD3_k127_1444714_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 1.134e-251 782.0
PJD3_k127_1444714_40 - - - - 0.000007112 48.0
PJD3_k127_1444714_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 8.09e-240 743.0
PJD3_k127_1444714_6 Utp--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 3.417e-216 678.0
PJD3_k127_1444714_7 PFAM ATP-binding region, ATPase domain protein K02482 - 2.7.13.3 5.557e-216 681.0
PJD3_k127_1444714_8 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 3.436e-200 668.0
PJD3_k127_1444714_9 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 580.0
PJD3_k127_1445968_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1544.0
PJD3_k127_1445968_10 PFAM PfkB domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 544.0
PJD3_k127_1445968_11 MatE K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006989 550.0
PJD3_k127_1445968_12 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 496.0
PJD3_k127_1445968_13 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 497.0
PJD3_k127_1445968_14 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 481.0
PJD3_k127_1445968_15 lipoprotein localization to outer membrane K02004,K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 427.0
PJD3_k127_1445968_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 422.0
PJD3_k127_1445968_2 Belongs to the enoyl-CoA hydratase isomerase family K01782,K01825 - 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 0.0 1201.0
PJD3_k127_1445968_20 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 385.0
PJD3_k127_1445968_22 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007985 377.0
PJD3_k127_1445968_24 Metallo-beta-lactamase superfamily protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 348.0
PJD3_k127_1445968_25 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 342.0
PJD3_k127_1445968_26 Belongs to the methyltransferase superfamily K06969,K12297 - 2.1.1.173,2.1.1.191,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 342.0
PJD3_k127_1445968_28 Belongs to the UPF0061 (SELO) family K08997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 308.0
PJD3_k127_1445968_30 Aminotransferase class-III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001068 308.0
PJD3_k127_1445968_31 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002544 301.0
PJD3_k127_1445968_32 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001384 266.0
PJD3_k127_1445968_33 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000005508 259.0
PJD3_k127_1445968_35 Belongs to the UPF0246 family K09861 - - 0.0000000000000000000000000000000000000000000000000000000000000001008 230.0
PJD3_k127_1445968_36 Protein of unknown function, DUF481 K07283 - - 0.000000000000000000000000000000000000000000000000000000000000004883 225.0
PJD3_k127_1445968_37 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.000000000000000000000000000000000000000000000000000000000000007481 224.0
PJD3_k127_1445968_38 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000001133 220.0
PJD3_k127_1445968_4 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 1.674e-312 960.0
PJD3_k127_1445968_40 TIGRFAM YD repeat protein - - - 0.0000000000000000000000000000000000000000000000000000009583 196.0
PJD3_k127_1445968_41 Conserved hypothetical protein 95 - - - 0.0000000000000000000000000000000000000000000000001441 184.0
PJD3_k127_1445968_44 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.0000000000000000000000000000000000000000001591 162.0
PJD3_k127_1445968_45 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000009578 162.0
PJD3_k127_1445968_46 replication factor c K02341,K02343 - 2.7.7.7 0.000000000000000000000000000000000000000008363 163.0
PJD3_k127_1445968_47 transporter component K07112 - - 0.00000000000000000000000000000000000000001806 156.0
PJD3_k127_1445968_48 phosphorelay signal transduction system K03413 - - 0.0000000000000000000000000000000000000001975 152.0
PJD3_k127_1445968_49 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000706 158.0
PJD3_k127_1445968_5 PFAM tRNA synthetase class II (D K and N) K01893 - 6.1.1.22 5.804e-268 829.0
PJD3_k127_1445968_50 Transporter Component K07112 - - 0.000000000000000000000000000000000000001378 151.0
PJD3_k127_1445968_51 Bacterial extracellular solute-binding proteins, family 3 - - - 0.000000000000000000000000000000000000003601 155.0
PJD3_k127_1445968_52 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000004533 145.0
PJD3_k127_1445968_53 PFAM RNA recognition motif - - - 0.000000000000000000000000000000001146 132.0
PJD3_k127_1445968_56 Pfam:DUF46 - - - 0.0000000000000000000000004819 111.0
PJD3_k127_1445968_57 Rhodanese Homology Domain - - - 0.00000000000000000000002576 103.0
PJD3_k127_1445968_59 acetyltransferase - - - 0.00000000000000000000273 106.0
PJD3_k127_1445968_6 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 6.64e-245 760.0
PJD3_k127_1445968_60 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000006341 98.0
PJD3_k127_1445968_63 Family of unknown function (DUF5329) - - - 0.0000000000000002182 83.0
PJD3_k127_1445968_65 membrane transporter protein K07090 - - 0.00000001383 64.0
PJD3_k127_1445968_7 Belongs to the DEAD box helicase family K03732 - 3.6.4.13 1.513e-241 764.0
PJD3_k127_1445968_8 Belongs to the peptidase S8 family - - - 7.323e-195 617.0
PJD3_k127_1445968_9 PFAM PSP1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 581.0
PJD3_k127_144859_1 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1557.0
PJD3_k127_144859_10 PFAM H transporting two-sector ATPase alpha beta subunit central region K02412 - 3.6.3.14 2.204e-261 809.0
PJD3_k127_144859_11 Belongs to the class-II aminoacyl-tRNA synthetase family K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0016874,GO:0016875,GO:0046983,GO:0140098,GO:0140101 6.1.1.14 1.433e-259 803.0
PJD3_k127_144859_12 two component, sigma54 specific, transcriptional regulator, Fis family - - - 7.56e-254 792.0
PJD3_k127_144859_13 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 6.914e-248 773.0
PJD3_k127_144859_14 HD domain K06885 - - 2.045e-243 756.0
PJD3_k127_144859_15 Flagellar hook protein FlgE K02390 - - 1.333e-242 752.0
PJD3_k127_144859_16 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 2.3e-241 750.0
PJD3_k127_144859_17 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 5.602e-229 711.0
PJD3_k127_144859_18 phosphorelay sensor kinase activity K01768 - 4.6.1.1 5.098e-221 689.0
PJD3_k127_144859_19 flagellar motor switch protein FliG K02410 - - 3.404e-205 640.0
PJD3_k127_144859_2 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.0 1126.0
PJD3_k127_144859_21 Mur ligase, middle domain K02558 - 6.3.2.45 1.423e-197 626.0
PJD3_k127_144859_22 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 9.004e-194 608.0
PJD3_k127_144859_23 peptidyl-prolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 585.0
PJD3_k127_144859_25 PFAM sigma-54 factor interaction domain-containing protein K10943 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 518.0
PJD3_k127_144859_26 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009062 524.0
PJD3_k127_144859_27 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008235 501.0
PJD3_k127_144859_28 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008905 483.0
PJD3_k127_144859_29 Belongs to the DEAD box helicase family K05591 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 482.0
PJD3_k127_144859_3 protein trimerization K02453 - - 0.0 1113.0
PJD3_k127_144859_30 PFAM TrkA-N domain protein K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 434.0
PJD3_k127_144859_31 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 435.0
PJD3_k127_144859_32 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008268 423.0
PJD3_k127_144859_33 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 407.0
PJD3_k127_144859_34 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 402.0
PJD3_k127_144859_35 PFAM permease YjgP YjgQ family protein K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 389.0
PJD3_k127_144859_36 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 375.0
PJD3_k127_144859_37 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009122 361.0
PJD3_k127_144859_38 Flagellar assembly protein FliH K02411 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 352.0
PJD3_k127_144859_39 SMART helix-turn-helix domain protein K15539 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007022 331.0
PJD3_k127_144859_4 Collagenase K08303 - - 0.0 1084.0
PJD3_k127_144859_40 Mediates zinc uptake. May also transport other divalent cations K07238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 318.0
PJD3_k127_144859_42 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006778 312.0
PJD3_k127_144859_44 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008126 295.0
PJD3_k127_144859_45 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 293.0
PJD3_k127_144859_46 ATP-dependent DNA helicase (RecQ) K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 294.0
PJD3_k127_144859_48 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002162 269.0
PJD3_k127_144859_49 Belongs to the flagella basal body rod proteins family K02388 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001394 266.0
PJD3_k127_144859_5 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1070.0
PJD3_k127_144859_50 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000111 268.0
PJD3_k127_144859_51 Ferritin-like domain K04047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001628 250.0
PJD3_k127_144859_52 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008975 245.0
PJD3_k127_144859_54 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.00000000000000000000000000000000000000000000000000000000000000000005916 232.0
PJD3_k127_144859_55 Putative flagellar - - - 0.0000000000000000000000000000000000000000000000000000000000000000003806 230.0
PJD3_k127_144859_56 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000001003 235.0
PJD3_k127_144859_57 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001054 230.0
PJD3_k127_144859_58 PFAM MgtE intracellular - - - 0.0000000000000000000000000000000000000000000000000000000000000002251 224.0
PJD3_k127_144859_6 The M ring may be actively involved in energy transduction K02409 - - 6.549e-312 960.0
PJD3_k127_144859_60 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000009958 213.0
PJD3_k127_144859_61 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000392 203.0
PJD3_k127_144859_62 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000000005615 216.0
PJD3_k127_144859_63 transmembrane signaling receptor activity - - - 0.00000000000000000000000000000000000000000000000000000162 202.0
PJD3_k127_144859_64 Flagellar hook-basal body complex protein FliE K02408 - - 0.000000000000000000000000000000000000000000000003543 174.0
PJD3_k127_144859_66 Protein of unknown function (DUF1456) - - - 0.00000000000000000000000000000000000001907 144.0
PJD3_k127_144859_67 Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins K07400 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010106,GO:0010467,GO:0015976,GO:0016043,GO:0016226,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0031163,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042592,GO:0042594,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0050896,GO:0051186,GO:0051536,GO:0051539,GO:0051540,GO:0051604,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071496,GO:0071704,GO:0071840,GO:0097428,GO:0098771,GO:1901564 - 0.00000000000000000000000000000000000009242 143.0
PJD3_k127_144859_68 Domain of unknown function (DUF1993) - - - 0.000000000000000000000000000000000000104 148.0
PJD3_k127_144859_7 Putative Flp pilus-assembly TadE/G-like - - - 6.542e-298 938.0
PJD3_k127_144859_70 4Fe-4S single cluster domain of Ferredoxin I K05337 - - 0.00000000000000000000000000000000004969 134.0
PJD3_k127_144859_71 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.000000000000000000000000000000002823 133.0
PJD3_k127_144859_72 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K06191 - - 0.000000000000000000000000000000005964 129.0
PJD3_k127_144859_73 domain, Protein - - - 0.0000000000000000000000000000001247 145.0
PJD3_k127_144859_75 - - - - 0.000000000000000000000000000001457 129.0
PJD3_k127_144859_76 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000004592 136.0
PJD3_k127_144859_77 Tetratricopeptide repeat - - - 0.0000000000000000000000000001452 130.0
PJD3_k127_144859_78 Membrane - - - 0.0000000000000000000000000007713 121.0
PJD3_k127_144859_8 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 4.534e-292 904.0
PJD3_k127_144859_81 RHS Repeat - - - 0.0000000000000000000001677 115.0
PJD3_k127_144859_82 Biopolymer transport protein - - - 0.0000000000000000000001895 103.0
PJD3_k127_144859_83 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000108 94.0
PJD3_k127_144859_84 RNA recognition motif K03655,K05592 - 3.6.4.12,3.6.4.13 0.000000000000003525 82.0
PJD3_k127_144859_85 LysR family - - - 0.00000000000003273 82.0
PJD3_k127_144859_86 endonuclease containing a URI domain K07461 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.00000000002068 67.0
PJD3_k127_144859_87 DNA-binding protein VF530 - - - 0.000000001578 58.0
PJD3_k127_144859_9 PFAM Cation transporter K03498 - - 4.188e-268 835.0
PJD3_k127_144859_91 Histidine kinase - - - 0.0003521 51.0
PJD3_k127_1489803_0 Oligopeptide/dipeptide transporter, C-terminal region K02031,K02032 - - 0.0 1045.0
PJD3_k127_1489803_1 hydrolase of the alpha beta-hydrolase fold K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007018 433.0
PJD3_k127_1489803_2 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 317.0
PJD3_k127_1489803_3 Belongs to the peptidase M48B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001809 271.0
PJD3_k127_1489803_5 FAD binding domain of DNA photolyase K01669 - 4.1.99.3 0.000000000000002902 75.0
PJD3_k127_1489803_6 Trypsin-like peptidase domain - - - 0.00000000000003901 72.0
PJD3_k127_1516077_0 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.0 1011.0
PJD3_k127_1516077_1 ABC transporter transmembrane region K06147,K18889 - - 1.772e-285 886.0
PJD3_k127_1516077_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005528 258.0
PJD3_k127_1516077_12 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002223 239.0
PJD3_k127_1516077_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000002308 224.0
PJD3_k127_1516077_14 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000001349 214.0
PJD3_k127_1516077_15 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000001143 202.0
PJD3_k127_1516077_16 WbqC-like protein family - - - 0.000000000000000000000000000000000000000000001043 174.0
PJD3_k127_1516077_17 Cytidylyltransferase K00983 - 2.7.7.43 0.00000000000000000000000000000000000000000007003 168.0
PJD3_k127_1516077_18 arabinose-5-phosphate isomerase activity K01627,K06041 - 2.5.1.55,5.3.1.13 0.0000000000000000000000000000000000000000001425 164.0
PJD3_k127_1516077_2 Iron-sulfur cluster-binding domain - - - 9.868e-258 796.0
PJD3_k127_1516077_20 Glycosyl transferase, family 2 - - - 0.00000000000000003567 81.0
PJD3_k127_1516077_21 pseudaminic acid biosynthesis-associated protein PseG K15897 - 3.6.1.57 0.0000000007929 70.0
PJD3_k127_1516077_3 Polysaccharide biosynthesis protein K17716 - 5.1.3.2 1.043e-218 680.0
PJD3_k127_1516077_4 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 610.0
PJD3_k127_1516077_5 NeuB family K01654,K15898 - 2.5.1.56,2.5.1.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 445.0
PJD3_k127_1516077_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 362.0
PJD3_k127_1516077_9 beta-fructofuranosidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001769 274.0
PJD3_k127_1569055_0 Met-zincin - - - 0.0 1397.0
PJD3_k127_1569055_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1194.0
PJD3_k127_1569055_10 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005665 587.0
PJD3_k127_1569055_11 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008448 526.0
PJD3_k127_1569055_12 Aminotransferase class-III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 517.0
PJD3_k127_1569055_13 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 510.0
PJD3_k127_1569055_16 PFAM Cobyrinic acid ac-diamide synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009343 416.0
PJD3_k127_1569055_17 4Fe-4S single cluster domain of Ferredoxin I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 413.0
PJD3_k127_1569055_18 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase K19200 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 415.0
PJD3_k127_1569055_19 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 388.0
PJD3_k127_1569055_2 Aminotransferase class-III K03918 - 2.6.1.36 0.0 1154.0
PJD3_k127_1569055_20 Endonuclease Exonuclease Phosphatase K01117 - 3.1.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008195 383.0
PJD3_k127_1569055_21 carboxypeptidase K14054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007304 376.0
PJD3_k127_1569055_22 3-oxoacid CoA-transferase K01028 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 372.0
PJD3_k127_1569055_23 peptidylprolyl isomerase, FKBP-type K03772 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 352.0
PJD3_k127_1569055_24 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 349.0
PJD3_k127_1569055_25 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01029 - 2.8.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009514 337.0
PJD3_k127_1569055_26 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 323.0
PJD3_k127_1569055_27 RHS Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 325.0
PJD3_k127_1569055_28 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 321.0
PJD3_k127_1569055_29 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 312.0
PJD3_k127_1569055_3 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1056.0
PJD3_k127_1569055_30 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008756 299.0
PJD3_k127_1569055_31 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000337 253.0
PJD3_k127_1569055_32 Regulator of cysteine desulfurase activity K02426 - - 0.000000000000000000000000000000000000000000000000000000000000000000003669 236.0
PJD3_k127_1569055_33 - - - - 0.0000000000000000000000000000000000000000000000000000000000000009761 227.0
PJD3_k127_1569055_34 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000000000000000000000000004968 215.0
PJD3_k127_1569055_36 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000000002506 164.0
PJD3_k127_1569055_37 Glutamine amidotransferase class-I - - - 0.00000000000000000000000000000000000001851 150.0
PJD3_k127_1569055_43 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000003041 67.0
PJD3_k127_1569055_45 Putative Flp pilus-assembly TadE/G-like - - - 0.0003517 55.0
PJD3_k127_1569055_5 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 1.235e-269 852.0
PJD3_k127_1569055_6 Participates in both transcription termination and antitermination K02600 - - 3.752e-254 789.0
PJD3_k127_1569055_7 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) - - - 4.264e-236 739.0
PJD3_k127_1569055_8 Transcriptional regulatory protein, C terminal - - - 4.609e-234 728.0
PJD3_k127_1569055_9 ErfK ybiS ycfS ynhG family protein - - - 2.359e-201 637.0
PJD3_k127_1722759_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0 1677.0
PJD3_k127_1722759_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1634.0
PJD3_k127_1722759_10 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005034 581.0
PJD3_k127_1722759_11 PFAM peptidase M3A and M3B, thimet oligopeptidase F K08602 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007895 587.0
PJD3_k127_1722759_12 Protein of unknown function (DUF3373) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 567.0
PJD3_k127_1722759_13 Efflux ABC transporter, permease ATP-binding protein K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051 554.0
PJD3_k127_1722759_14 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 518.0
PJD3_k127_1722759_15 Belongs to the ABC transporter superfamily K02031,K12371 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 499.0
PJD3_k127_1722759_16 N-terminal TM domain of oligopeptide transport permease C K02034,K12370 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 497.0
PJD3_k127_1722759_17 Coproporphyrinogen III oxidase K00228 - 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 489.0
PJD3_k127_1722759_18 Belongs to the ABC transporter superfamily K02032,K10823,K12372 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 486.0
PJD3_k127_1722759_19 FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006916 467.0
PJD3_k127_1722759_2 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835,K01840 - 5.4.2.2,5.4.2.8 4.733e-310 957.0
PJD3_k127_1722759_20 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 430.0
PJD3_k127_1722759_21 Aminotransferase K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006304 391.0
PJD3_k127_1722759_22 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 422.0
PJD3_k127_1722759_24 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 370.0
PJD3_k127_1722759_25 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 361.0
PJD3_k127_1722759_26 YadA-like membrane anchor domain K12342 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 379.0
PJD3_k127_1722759_27 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 349.0
PJD3_k127_1722759_28 Scaffold protein Nfu/NifU N terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 340.0
PJD3_k127_1722759_29 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007006 344.0
PJD3_k127_1722759_3 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K12368 - - 2.367e-299 925.0
PJD3_k127_1722759_30 MltA-interacting MipA family protein K07274 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006659 336.0
PJD3_k127_1722759_31 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009966 346.0
PJD3_k127_1722759_32 Acid phosphatase homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 335.0
PJD3_k127_1722759_33 Domain of unknown function (DUF3943) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 327.0
PJD3_k127_1722759_34 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009579 327.0
PJD3_k127_1722759_35 Outer membrane efflux protein K15725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 323.0
PJD3_k127_1722759_36 Sulfite exporter TauE/SafE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000839 304.0
PJD3_k127_1722759_38 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006246 270.0
PJD3_k127_1722759_39 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001311 249.0
PJD3_k127_1722759_4 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 8.514e-234 726.0
PJD3_k127_1722759_40 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001015 243.0
PJD3_k127_1722759_41 COG0451 Nucleoside-diphosphate-sugar epimerases K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000354 241.0
PJD3_k127_1722759_43 metalloendopeptidase activity K03799 - - 0.00000000000000000000000000000000000000000000000000000000000004681 221.0
PJD3_k127_1722759_44 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000003762 222.0
PJD3_k127_1722759_45 Uncharacterized protein family (UPF0051) K09014 - - 0.000000000000000000000000000000000000000000000000000000000000842 210.0
PJD3_k127_1722759_48 cytochrome p450 - - - 0.00000000000000000000000000000000000000000000000000006503 203.0
PJD3_k127_1722759_49 SWIB/MDM2 domain - - - 0.00000000000000000000000000000000000000000000000006011 179.0
PJD3_k127_1722759_5 ErfK ybiS ycfS ynhG family protein - - - 7.889e-229 719.0
PJD3_k127_1722759_50 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000006961 176.0
PJD3_k127_1722759_51 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000001004 173.0
PJD3_k127_1722759_52 hydrolases or acyltransferases, alpha beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000001314 180.0
PJD3_k127_1722759_53 electron transfer activity K03616,K05337 - - 0.0000000000000000000000000000000000000000000002311 168.0
PJD3_k127_1722759_54 Putative FMN-binding domain K07734 - - 0.0000000000000000000000000000000000000000001883 166.0
PJD3_k127_1722759_55 Psort location CytoplasmicMembrane, score K00995 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.8.5 0.0000000000000000000000000000000000000000007724 164.0
PJD3_k127_1722759_56 PFAM Bacterial transferase hexapeptide (three repeats) - - - 0.000000000000000000000000000000000000000001048 164.0
PJD3_k127_1722759_57 of the RND superfamily K07003 - - 0.000000000000000000000000000000000000004488 167.0
PJD3_k127_1722759_58 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000007722 154.0
PJD3_k127_1722759_59 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000000000000001624 152.0
PJD3_k127_1722759_6 FeS assembly protein SufD K09015 - - 3.206e-194 612.0
PJD3_k127_1722759_60 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000626 153.0
PJD3_k127_1722759_62 Glutaredoxin - - - 0.00000000000000000000000000000000247 132.0
PJD3_k127_1722759_64 Acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000009993 129.0
PJD3_k127_1722759_65 methyltransferase - - - 0.0000000000000000000000000009402 125.0
PJD3_k127_1722759_67 - - - - 0.00000000000000000001301 96.0
PJD3_k127_1722759_69 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.00000000000000006981 90.0
PJD3_k127_1722759_7 lytic transglycosylase activity K08307,K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 619.0
PJD3_k127_1722759_71 Bacterial regulatory proteins, tetR family - - - 0.000000000000000326 86.0
PJD3_k127_1722759_73 Winged helix-turn-helix transcription repressor, HrcA DNA-binding - - - 0.0000000001797 67.0
PJD3_k127_1722759_74 GHKL domain - - - 0.00000001786 66.0
PJD3_k127_1722759_75 domain, Protein K15125 - - 0.00000002403 68.0
PJD3_k127_1722759_76 The GLUG motif - - - 0.00000009077 66.0
PJD3_k127_1722759_78 cheY-homologous receiver domain - - - 0.0000139 52.0
PJD3_k127_1722759_79 COG1538 Outer membrane protein - - - 0.00001471 57.0
PJD3_k127_1722759_8 PFAM binding-protein-dependent transport systems inner membrane component K02033,K12369 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 591.0
PJD3_k127_1722759_80 - - - - 0.00002294 51.0
PJD3_k127_1722759_81 Pectate lyase - - - 0.0003485 55.0
PJD3_k127_1722759_9 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005748 595.0
PJD3_k127_2016685_0 Alpha-tubulin suppressor and related RCC1 domain-containing - - - 0.0 1196.0
PJD3_k127_2016685_1 PFAM ABC transporter related K06020 - 3.6.3.25 0.0 1008.0
PJD3_k127_2016685_10 PFAM metal-dependent phosphohydrolase, HD sub domain K01524,K07016 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 528.0
PJD3_k127_2016685_11 TIGRFAM Mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 518.0
PJD3_k127_2016685_12 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 475.0
PJD3_k127_2016685_13 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003499 457.0
PJD3_k127_2016685_14 carboxylic acid catabolic process K01776,K02549,K19802 GO:0008150,GO:0040007 4.2.1.113,5.1.1.20,5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 456.0
PJD3_k127_2016685_15 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 419.0
PJD3_k127_2016685_16 TIGRFAM phosphate ABC transporter K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 421.0
PJD3_k127_2016685_17 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000328 406.0
PJD3_k127_2016685_18 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 394.0
PJD3_k127_2016685_19 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 375.0
PJD3_k127_2016685_2 Adenosine/AMP deaminase - - - 3.655e-293 906.0
PJD3_k127_2016685_20 PFAM response regulator receiver K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 349.0
PJD3_k127_2016685_21 Collagen-binding surface adhesin SpaP (antigen I II family) K07337 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 325.0
PJD3_k127_2016685_22 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 330.0
PJD3_k127_2016685_24 PFAM glycosyl transferase family 9 K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 321.0
PJD3_k127_2016685_25 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 301.0
PJD3_k127_2016685_28 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001035 277.0
PJD3_k127_2016685_29 Sporulation related domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006826 275.0
PJD3_k127_2016685_3 peptidyl-tyrosine sulfation - - - 7.637e-258 802.0
PJD3_k127_2016685_31 type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis K02283,K03196,K12083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000706 256.0
PJD3_k127_2016685_33 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000006301 222.0
PJD3_k127_2016685_35 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000000000000000003789 192.0
PJD3_k127_2016685_36 Putative inner membrane exporter, YdcZ K09936 - - 0.000000000000000000000000000000000000000000000000000006068 192.0
PJD3_k127_2016685_4 histidine kinase HAMP region domain protein K07636 - 2.7.13.3 1.691e-220 698.0
PJD3_k127_2016685_42 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.00000000000001396 81.0
PJD3_k127_2016685_5 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 584.0
PJD3_k127_2016685_6 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 579.0
PJD3_k127_2016685_7 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 575.0
PJD3_k127_2016685_8 Lysin motif K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 550.0
PJD3_k127_2016685_9 protein transport across the cell outer membrane K02453,K12282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 542.0
PJD3_k127_2356559_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1488.0
PJD3_k127_2356559_1 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.0 1353.0
PJD3_k127_2356559_10 Pyruvate ferredoxin oxidoreductase and related K00174 - 1.2.7.11,1.2.7.3 1.657e-217 691.0
PJD3_k127_2356559_11 Subtilase family - - - 6.471e-208 654.0
PJD3_k127_2356559_13 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 3.136e-197 616.0
PJD3_k127_2356559_14 conserved protein UCP016719 - - - 1.795e-194 612.0
PJD3_k127_2356559_15 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 585.0
PJD3_k127_2356559_16 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 580.0
PJD3_k127_2356559_17 GH3 auxin-responsive promoter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007866 569.0
PJD3_k127_2356559_18 Subtilase family K14645 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 555.0
PJD3_k127_2356559_19 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 563.0
PJD3_k127_2356559_2 Belongs to the glutamate synthase family K22083 - 2.1.1.21 1.918e-273 847.0
PJD3_k127_2356559_20 Major facilitator Superfamily K08225 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007522 539.0
PJD3_k127_2356559_21 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 542.0
PJD3_k127_2356559_23 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 505.0
PJD3_k127_2356559_24 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 501.0
PJD3_k127_2356559_25 desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006858 504.0
PJD3_k127_2356559_26 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 496.0
PJD3_k127_2356559_27 PFAM phosphoesterase, PA-phosphatase related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 483.0
PJD3_k127_2356559_28 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 477.0
PJD3_k127_2356559_3 lysine 2,3-aminomutase K01843 - 5.4.3.2 2.525e-273 843.0
PJD3_k127_2356559_31 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009323 460.0
PJD3_k127_2356559_32 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 475.0
PJD3_k127_2356559_33 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 417.0
PJD3_k127_2356559_34 COGs COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 401.0
PJD3_k127_2356559_35 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007281 389.0
PJD3_k127_2356559_36 COG5285 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin K00477 - 1.14.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009321 380.0
PJD3_k127_2356559_37 Periplasmic binding protein domain K10439 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000375 380.0
PJD3_k127_2356559_38 succinylglutamate desuccinylase K06987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 355.0
PJD3_k127_2356559_39 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007771 328.0
PJD3_k127_2356559_4 PFAM sodium alanine symporter K03310 - - 2.93e-261 811.0
PJD3_k127_2356559_40 D-isomer specific 2-hydroxyacid dehydrogenase K00015,K15893 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009852 329.0
PJD3_k127_2356559_41 protein conserved in bacteria K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 319.0
PJD3_k127_2356559_43 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 291.0
PJD3_k127_2356559_44 Thiopurine S-methyltransferase (TPMT) K00569 - 2.1.1.67 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004514 283.0
PJD3_k127_2356559_45 Domain of unknown function (DUF4105) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003611 298.0
PJD3_k127_2356559_46 Nucleotide-binding protein implicated in inhibition of septum formation K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004007 268.0
PJD3_k127_2356559_47 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008936 243.0
PJD3_k127_2356559_48 Belongs to the peptidase S1B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000003671 244.0
PJD3_k127_2356559_5 Penicillin amidase K01434,K07116 - 3.5.1.11,3.5.1.97 1.476e-260 820.0
PJD3_k127_2356559_51 RNA pseudouridylate synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000001189 212.0
PJD3_k127_2356559_53 - - - - 0.0000000000000000000000000000000000000000000000000000000002458 209.0
PJD3_k127_2356559_54 Bacterial extracellular solute-binding proteins, family 3 - - - 0.000000000000000000000000000000000000000000000000000000005023 207.0
PJD3_k127_2356559_55 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18589 - 1.5.1.3 0.000000000000000000000000000000000000000000000000000003684 194.0
PJD3_k127_2356559_57 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000746 184.0
PJD3_k127_2356559_6 PFAM MMPL family K07003 - - 3.129e-257 813.0
PJD3_k127_2356559_62 Putative DNA-binding domain - - - 0.0000000000000000000000000000000000004295 149.0
PJD3_k127_2356559_63 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000112 141.0
PJD3_k127_2356559_64 protein tyrosine phosphatase activity K01104,K19302 - 3.1.3.48,3.6.1.27 0.00000000000000000000000000000005161 132.0
PJD3_k127_2356559_65 electron transfer activity K03616,K05337 - - 0.0000000000000000000000000000005738 123.0
PJD3_k127_2356559_66 - - - - 0.00000000000000000000000000002054 121.0
PJD3_k127_2356559_67 ABC-type amino acid transport signal transduction systems, periplasmic component domain K02030 - - 0.0000000000000000000000000002596 123.0
PJD3_k127_2356559_68 Thermolysin metallopeptidase, alpha-helical domain K01400 - 3.4.24.28 0.00000000000000000000000002987 125.0
PJD3_k127_2356559_69 - - - - 0.00000000000000000000000009201 109.0
PJD3_k127_2356559_7 Glucose / Sorbosone dehydrogenase - - - 3.532e-244 762.0
PJD3_k127_2356559_70 - - - - 0.0000000000000000000000001616 120.0
PJD3_k127_2356559_71 Rubrerythrin - - - 0.0000000000000000000000119 107.0
PJD3_k127_2356559_72 phosphorelay signal transduction system K02490,K10126 - - 0.00000000000000000001644 95.0
PJD3_k127_2356559_74 Psort location Periplasmic, score K09807 - - 0.00000000000003874 81.0
PJD3_k127_2356559_8 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 1.202e-230 724.0
PJD3_k127_2356559_9 Belongs to the aspartokinase family K00928 - 2.7.2.4 1.235e-218 686.0
PJD3_k127_2654104_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1794.0
PJD3_k127_2654104_1 Penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.0 1296.0
PJD3_k127_2654104_100 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000000000000000000000000003081 234.0
PJD3_k127_2654104_101 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000000000000000000000000000000000000001825 233.0
PJD3_k127_2654104_103 PFAM flagellar protein FliS K02422 - - 0.0000000000000000000000000000000000000000000000000000000000000000007279 229.0
PJD3_k127_2654104_104 shikimate 3-dehydrogenase (NADP+) activity K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000009382 226.0
PJD3_k127_2654104_107 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000003368 222.0
PJD3_k127_2654104_108 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000000000000000002801 207.0
PJD3_k127_2654104_11 PFAM glycosyl transferase family 9 - - - 1.852e-239 751.0
PJD3_k127_2654104_110 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000004019 207.0
PJD3_k127_2654104_111 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000001432 207.0
PJD3_k127_2654104_113 bacterial-type flagellum organization K02279,K02386 - - 0.0000000000000000000000000000000000000000000000000000008214 202.0
PJD3_k127_2654104_117 actin binding - - - 0.0000000000000000000000000000000000000000000000000001049 204.0
PJD3_k127_2654104_118 Iron-sulphur cluster biosynthesis - - - 0.00000000000000000000000000000000000000000000000001471 181.0
PJD3_k127_2654104_12 Belongs to the MurCDEF family K01924 - 6.3.2.8 3.692e-238 742.0
PJD3_k127_2654104_120 PFAM Aminoglycoside phosphotransferase K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000003343 183.0
PJD3_k127_2654104_121 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000000000000003309 168.0
PJD3_k127_2654104_124 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000002225 158.0
PJD3_k127_2654104_125 histone H2A K63-linked ubiquitination - - - 0.0000000000000000000000000000000000000000544 161.0
PJD3_k127_2654104_128 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000002501 158.0
PJD3_k127_2654104_129 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.00000000000000000000000000000000005871 135.0
PJD3_k127_2654104_13 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 1.019e-235 735.0
PJD3_k127_2654104_130 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.0000000000000000000000000000000001062 138.0
PJD3_k127_2654104_131 bacterial-type flagellum organization K02398 GO:0000988,GO:0000989,GO:0003674,GO:0008150,GO:0009889,GO:0009892,GO:0010556,GO:0010605,GO:0016989,GO:0019219,GO:0019222,GO:0030162,GO:0031323,GO:0031324,GO:0031326,GO:0032268,GO:0032269,GO:0045861,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.00000000000000000000000000000003541 128.0
PJD3_k127_2654104_133 Endonuclease Exonuclease Phosphatase - - - 0.000000000000000000000000006318 119.0
PJD3_k127_2654104_137 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000000006194 94.0
PJD3_k127_2654104_14 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 4.968e-233 724.0
PJD3_k127_2654104_143 PFAM permease YjgP YjgQ family protein K11720 - - 0.00000002364 56.0
PJD3_k127_2654104_144 indolepyruvate ferredoxin oxidoreductase activity - - - 0.0000000255 57.0
PJD3_k127_2654104_15 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 3.109e-231 724.0
PJD3_k127_2654104_16 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821,K07250 - 2.6.1.11,2.6.1.17,2.6.1.19,2.6.1.22 2.824e-229 717.0
PJD3_k127_2654104_17 PFAM Amidohydrolase 2 - - - 1.47e-228 711.0
PJD3_k127_2654104_18 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 5.612e-223 702.0
PJD3_k127_2654104_19 acyl-coa dehydrogenase K00249 - 1.3.8.7 7.395e-222 692.0
PJD3_k127_2654104_2 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 8.763e-314 970.0
PJD3_k127_2654104_20 twitching motility protein K02669 - - 1.702e-215 672.0
PJD3_k127_2654104_21 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 3.291e-213 676.0
PJD3_k127_2654104_22 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 2.563e-212 674.0
PJD3_k127_2654104_23 - - - - 3.169e-212 669.0
PJD3_k127_2654104_24 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 7.896e-211 671.0
PJD3_k127_2654104_25 Type II secretion system K02653 - - 8.821e-206 645.0
PJD3_k127_2654104_26 May be involved in recombinational repair of damaged DNA K03631 - - 8.912e-205 650.0
PJD3_k127_2654104_27 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 8.587e-204 647.0
PJD3_k127_2654104_29 Oxygen tolerance - - - 8.588e-200 636.0
PJD3_k127_2654104_3 PFAM Type II secretion system protein E K02652 - - 9.939e-313 963.0
PJD3_k127_2654104_30 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 2.294e-197 619.0
PJD3_k127_2654104_31 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 602.0
PJD3_k127_2654104_32 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 572.0
PJD3_k127_2654104_33 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 586.0
PJD3_k127_2654104_34 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 561.0
PJD3_k127_2654104_35 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 558.0
PJD3_k127_2654104_36 electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 557.0
PJD3_k127_2654104_37 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 552.0
PJD3_k127_2654104_38 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 550.0
PJD3_k127_2654104_39 Belongs to the bacterial flagellin family K02397 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 534.0
PJD3_k127_2654104_4 CHASE2 domain K07636 - 2.7.13.3 1.712e-308 954.0
PJD3_k127_2654104_40 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 533.0
PJD3_k127_2654104_41 ATPase associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 530.0
PJD3_k127_2654104_42 N-succinyltransferase beta subunit K00673 - 2.3.1.109 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 526.0
PJD3_k127_2654104_43 AP endonuclease family 2 K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000535 520.0
PJD3_k127_2654104_44 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 518.0
PJD3_k127_2654104_45 penicillin-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 512.0
PJD3_k127_2654104_46 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004731,GO:0006082,GO:0006139,GO:0006144,GO:0006168,GO:0006520,GO:0006555,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009112,GO:0009113,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0017061,GO:0017144,GO:0018130,GO:0019438,GO:0019509,GO:0019752,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007558 494.0
PJD3_k127_2654104_47 Belongs to the flagella basal body rod proteins family K02392 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 481.0
PJD3_k127_2654104_48 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 469.0
PJD3_k127_2654104_49 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 466.0
PJD3_k127_2654104_5 two component, sigma54 specific, transcriptional regulator, Fis family - - - 7.052e-294 905.0
PJD3_k127_2654104_50 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 458.0
PJD3_k127_2654104_51 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000656 454.0
PJD3_k127_2654104_53 Belongs to the GcvT family K06980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 461.0
PJD3_k127_2654104_54 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006751 451.0
PJD3_k127_2654104_55 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 456.0
PJD3_k127_2654104_56 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 445.0
PJD3_k127_2654104_58 Belongs to the flagella basal body rod proteins family K02391,K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000872 424.0
PJD3_k127_2654104_59 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 416.0
PJD3_k127_2654104_6 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 3.323e-278 857.0
PJD3_k127_2654104_60 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 419.0
PJD3_k127_2654104_61 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 420.0
PJD3_k127_2654104_62 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 391.0
PJD3_k127_2654104_64 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 376.0
PJD3_k127_2654104_65 TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 370.0
PJD3_k127_2654104_66 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 364.0
PJD3_k127_2654104_67 PFAM Lytic transglycosylase catalytic K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 384.0
PJD3_k127_2654104_69 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 363.0
PJD3_k127_2654104_7 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 1.281e-262 830.0
PJD3_k127_2654104_70 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 360.0
PJD3_k127_2654104_71 Belongs to the uridine kinase family K00855,K00876 - 2.7.1.19,2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 353.0
PJD3_k127_2654104_72 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 367.0
PJD3_k127_2654104_74 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 329.0
PJD3_k127_2654104_76 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 327.0
PJD3_k127_2654104_79 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 325.0
PJD3_k127_2654104_8 Succinylglutamic semialdehyde dehydrogenase K06447 - 1.2.1.71 3.314e-255 794.0
PJD3_k127_2654104_80 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 317.0
PJD3_k127_2654104_81 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008989 309.0
PJD3_k127_2654104_82 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 301.0
PJD3_k127_2654104_83 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005491 299.0
PJD3_k127_2654104_84 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 295.0
PJD3_k127_2654104_85 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 293.0
PJD3_k127_2654104_86 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 289.0
PJD3_k127_2654104_87 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000421 292.0
PJD3_k127_2654104_88 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 289.0
PJD3_k127_2654104_89 TonB C terminal K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 292.0
PJD3_k127_2654104_9 TIGRFAM Flagellar hook-associated protein, FlgK K02396 - - 1.7e-251 782.0
PJD3_k127_2654104_90 Protein of unknown function DUF115 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 286.0
PJD3_k127_2654104_93 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000001766 269.0
PJD3_k127_2654104_95 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000006315 255.0
PJD3_k127_2654104_96 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009072 251.0
PJD3_k127_2654104_98 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001283 240.0
PJD3_k127_2725458_0 Glycosyltransferase 36 associated - - - 1.981e-270 859.0
PJD3_k127_2725458_1 Transcriptional regulator K03717 GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000005951 207.0
PJD3_k127_2728623_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1414.0
PJD3_k127_2728623_1 LysM domain - - - 0.0 1032.0
PJD3_k127_2728623_10 Pfam Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 428.0
PJD3_k127_2728623_11 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006072 408.0
PJD3_k127_2728623_12 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005899 398.0
PJD3_k127_2728623_13 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 376.0
PJD3_k127_2728623_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 341.0
PJD3_k127_2728623_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000396 336.0
PJD3_k127_2728623_17 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 332.0
PJD3_k127_2728623_2 PFAM MMPL family K07003 - - 5e-323 1004.0
PJD3_k127_2728623_20 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 317.0
PJD3_k127_2728623_21 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 295.0
PJD3_k127_2728623_22 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003289 280.0
PJD3_k127_2728623_23 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000001035 261.0
PJD3_k127_2728623_24 Serine hydrolase (FSH1) K06999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008409 258.0
PJD3_k127_2728623_25 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000004381 251.0
PJD3_k127_2728623_26 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000005392 250.0
PJD3_k127_2728623_27 Pentapeptide repeats (9 copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002029 242.0
PJD3_k127_2728623_28 PFAM FecR protein - - - 0.00000000000000000000000000000000000000000000000000000000000000003179 231.0
PJD3_k127_2728623_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 1.665e-237 735.0
PJD3_k127_2728623_30 lipid A biosynthetic process - - - 0.00000000000000000000000000000000000000000000000002789 182.0
PJD3_k127_2728623_32 Collagen-binding surface adhesin SpaP (antigen I II family) K07337 - - 0.000000000000000000000000000000004586 128.0
PJD3_k127_2728623_33 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000004036 130.0
PJD3_k127_2728623_38 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000001551 68.0
PJD3_k127_2728623_39 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000006978 48.0
PJD3_k127_2728623_5 PFAM peptidase M48 Ste24p K06013 - 3.4.24.84 9.77e-208 653.0
PJD3_k127_2728623_6 Domain of unknown function (DUF368) K08974 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 498.0
PJD3_k127_2728623_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 440.0
PJD3_k127_2728623_9 Protein of unknown function (DUF2797) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 428.0
PJD3_k127_2748776_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1933.0
PJD3_k127_2748776_1 single-stranded-DNA-specific exonuclease RecJ K07462 - - 1.412e-297 921.0
PJD3_k127_2748776_11 PFAM TRAP dicarboxylate transporter- DctP subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 513.0
PJD3_k127_2748776_12 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007745 511.0
PJD3_k127_2748776_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007478 490.0
PJD3_k127_2748776_14 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 464.0
PJD3_k127_2748776_16 Lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 462.0
PJD3_k127_2748776_17 EXOIII K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 443.0
PJD3_k127_2748776_18 PFAM FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 438.0
PJD3_k127_2748776_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 9.74e-278 856.0
PJD3_k127_2748776_20 transport system involved in gliding motility, auxiliary K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 422.0
PJD3_k127_2748776_21 Endonuclease I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 389.0
PJD3_k127_2748776_23 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004241 372.0
PJD3_k127_2748776_25 Nucleoside-binding outer membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007166 348.0
PJD3_k127_2748776_26 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 344.0
PJD3_k127_2748776_27 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 325.0
PJD3_k127_2748776_28 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 329.0
PJD3_k127_2748776_3 membrane organization K07126,K07277 - - 3.824e-272 865.0
PJD3_k127_2748776_30 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009536 318.0
PJD3_k127_2748776_31 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007056 315.0
PJD3_k127_2748776_33 PilZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006261 259.0
PJD3_k127_2748776_34 amino acid transport K07493 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000252 260.0
PJD3_k127_2748776_35 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000005028 233.0
PJD3_k127_2748776_38 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000000003318 212.0
PJD3_k127_2748776_4 e3 binding domain K00658 - 2.3.1.61 1.584e-231 727.0
PJD3_k127_2748776_42 Belongs to the UPF0260 family K09160 - - 0.000000000000000000000000000000000000000000000000006281 184.0
PJD3_k127_2748776_43 ATP-independent chaperone mediated protein folding - - - 0.0000000000000000000000000000000000000000000000008666 179.0
PJD3_k127_2748776_48 GGDEF domain K11527 - 2.7.13.3 0.0000000000000000000000000000000000000008786 151.0
PJD3_k127_2748776_5 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 1.072e-222 694.0
PJD3_k127_2748776_54 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.0000000000000000000000000000001196 133.0
PJD3_k127_2748776_55 acid phosphatase activity - - - 0.0000000000000000000000000000005156 134.0
PJD3_k127_2748776_57 Maf-like protein K06287 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.00000000000000000000000000007805 124.0
PJD3_k127_2748776_6 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 5.686e-217 678.0
PJD3_k127_2748776_60 DUF167 K09131 - - 0.00000000000000000004177 94.0
PJD3_k127_2748776_62 ABC-2 family transporter protein K01992 - - 0.0000000000000003051 88.0
PJD3_k127_2748776_64 Protein of unknown function (DUF1176) - - - 0.00000000002477 70.0
PJD3_k127_2748776_65 - - - - 0.0000004024 52.0
PJD3_k127_2748776_7 AAA ATPase, central domain protein K07478 - - 5.166e-202 636.0
PJD3_k127_2748776_8 PFAM phosphoesterase, RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 541.0
PJD3_k127_2748776_9 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 544.0
PJD3_k127_2797445_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1497.0
PJD3_k127_2797445_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1409.0
PJD3_k127_2797445_10 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 6.775e-212 668.0
PJD3_k127_2797445_11 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 7.975e-212 661.0
PJD3_k127_2797445_12 - - - - 1.526e-208 659.0
PJD3_k127_2797445_13 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 3.686e-199 626.0
PJD3_k127_2797445_14 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 1.409e-198 630.0
PJD3_k127_2797445_15 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 596.0
PJD3_k127_2797445_16 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 598.0
PJD3_k127_2797445_17 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005014 580.0
PJD3_k127_2797445_18 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009093 535.0
PJD3_k127_2797445_19 PFAM NAD-dependent epimerase dehydratase K01709 - 4.2.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 507.0
PJD3_k127_2797445_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 6.063e-292 899.0
PJD3_k127_2797445_20 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008929 498.0
PJD3_k127_2797445_21 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009316 505.0
PJD3_k127_2797445_22 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006876 486.0
PJD3_k127_2797445_23 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 487.0
PJD3_k127_2797445_25 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 466.0
PJD3_k127_2797445_26 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 463.0
PJD3_k127_2797445_27 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604,K10011 - 1.1.1.305,2.1.2.13,2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 417.0
PJD3_k127_2797445_28 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase K03606 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 402.0
PJD3_k127_2797445_29 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 392.0
PJD3_k127_2797445_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.912e-281 868.0
PJD3_k127_2797445_30 PFAM Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 393.0
PJD3_k127_2797445_31 DUF based on E. rectale Gene description (DUF3880) K06320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008353 387.0
PJD3_k127_2797445_32 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 363.0
PJD3_k127_2797445_33 PFAM permease YjgP YjgQ family protein K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007175 352.0
PJD3_k127_2797445_34 rRNA methyltransferase activity K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004362 347.0
PJD3_k127_2797445_35 Glycosyltransferase family 10 (fucosyltransferase) C-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 302.0
PJD3_k127_2797445_36 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 289.0
PJD3_k127_2797445_37 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000439 273.0
PJD3_k127_2797445_38 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000603 274.0
PJD3_k127_2797445_39 O-antigen ligase like membrane protein K02847 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001395 260.0
PJD3_k127_2797445_4 Histidine ammonia-lyase K01745 - 4.3.1.3 1.465e-278 861.0
PJD3_k127_2797445_40 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000004067 252.0
PJD3_k127_2797445_41 Transketolase K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000212 231.0
PJD3_k127_2797445_42 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000005374 216.0
PJD3_k127_2797445_43 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000000000000000000000000000077 205.0
PJD3_k127_2797445_44 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000005684 204.0
PJD3_k127_2797445_45 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000000000000009574 200.0
PJD3_k127_2797445_46 Glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000001034 211.0
PJD3_k127_2797445_47 ATP synthesis coupled proton transport K02109 - - 0.000000000000000000000000000000000000000000000000000009534 193.0
PJD3_k127_2797445_48 Nucleotidyl transferase K00978 - 2.7.7.33 0.0000000000000000000000000000000000000000000000000009453 192.0
PJD3_k127_2797445_49 ATP synthesis coupled proton transport K02109,K03100,K20444 - 3.4.21.89 0.000000000000000000000000000000000000000000000000001809 187.0
PJD3_k127_2797445_5 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1.555e-271 847.0
PJD3_k127_2797445_50 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000002957 188.0
PJD3_k127_2797445_51 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000006165 174.0
PJD3_k127_2797445_52 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000000000000000000000000009154 162.0
PJD3_k127_2797445_53 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000005354 140.0
PJD3_k127_2797445_54 polysaccharide biosynthetic process - - - 0.00000000000000000000000000000004854 135.0
PJD3_k127_2797445_57 Ribosomal protein L34 K02914 - - 0.0000000000000001391 80.0
PJD3_k127_2797445_6 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 3.995e-262 820.0
PJD3_k127_2797445_7 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 3.075e-254 793.0
PJD3_k127_2797445_8 Belongs to the DegT DnrJ EryC1 family K12452 - 1.17.1.1 6.351e-224 700.0
PJD3_k127_2797445_9 Patatin-like phospholipase - - - 3.373e-220 687.0
PJD3_k127_3000363_1 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000002448 80.0
PJD3_k127_3138442_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 2126.0
PJD3_k127_3138442_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0 1059.0
PJD3_k127_3138442_10 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 8.92e-260 806.0
PJD3_k127_3138442_11 HAD superfamily (subfamily IG) hydrolase 5'-Nucleotidase - - - 5.079e-254 787.0
PJD3_k127_3138442_12 Domain of unknown function (DUF4105) - - - 3.925e-252 791.0
PJD3_k127_3138442_13 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 3.207e-245 760.0
PJD3_k127_3138442_14 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.692e-232 724.0
PJD3_k127_3138442_15 PFAM metal-dependent phosphohydrolase, HD sub domain K01524,K07016 - 3.6.1.11,3.6.1.40 1.015e-225 706.0
PJD3_k127_3138442_17 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 9.273e-207 650.0
PJD3_k127_3138442_18 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 1.009e-195 616.0
PJD3_k127_3138442_19 efflux transmembrane transporter activity K03287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006226 613.0
PJD3_k127_3138442_20 plasmid maintenance K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 584.0
PJD3_k127_3138442_21 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 531.0
PJD3_k127_3138442_22 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 527.0
PJD3_k127_3138442_24 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 495.0
PJD3_k127_3138442_25 curli production assembly transport component CsgG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 492.0
PJD3_k127_3138442_26 radical SAM domain protein K03716 - 4.1.99.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004488 481.0
PJD3_k127_3138442_28 Histone deacetylase K11418 - 3.5.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007814 445.0
PJD3_k127_3138442_29 aldo keto reductase K05275 - 1.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 443.0
PJD3_k127_3138442_3 PFAM cytochrome c biogenesis protein, transmembrane region K04084 - 1.8.1.8 1.4e-304 949.0
PJD3_k127_3138442_31 Catalyzes the conversion of dihydroorotate to orotate K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005877 432.0
PJD3_k127_3138442_32 PFAM metal-dependent phosphohydrolase, HD sub domain K01524,K02282,K07016,K20971 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 436.0
PJD3_k127_3138442_33 PFAM Ribosomal small subunit Rsm22 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006894 406.0
PJD3_k127_3138442_34 Transcriptional regulator, LysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 401.0
PJD3_k127_3138442_35 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 409.0
PJD3_k127_3138442_36 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 391.0
PJD3_k127_3138442_37 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 385.0
PJD3_k127_3138442_38 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 379.0
PJD3_k127_3138442_39 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007671 374.0
PJD3_k127_3138442_4 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 9.545e-295 910.0
PJD3_k127_3138442_40 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 377.0
PJD3_k127_3138442_42 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895 341.0
PJD3_k127_3138442_43 Domain of unknown function (DUF4340) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 339.0
PJD3_k127_3138442_44 Pirin K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 331.0
PJD3_k127_3138442_45 PFAM periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 332.0
PJD3_k127_3138442_47 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009061 319.0
PJD3_k127_3138442_48 GHKL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 318.0
PJD3_k127_3138442_49 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 304.0
PJD3_k127_3138442_5 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 2.671e-293 906.0
PJD3_k127_3138442_50 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 306.0
PJD3_k127_3138442_51 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 304.0
PJD3_k127_3138442_52 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004881 297.0
PJD3_k127_3138442_53 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002171 283.0
PJD3_k127_3138442_54 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000142 273.0
PJD3_k127_3138442_55 Belongs to the SfsA family K06206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002279 272.0
PJD3_k127_3138442_56 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000001688 265.0
PJD3_k127_3138442_57 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000001088 269.0
PJD3_k127_3138442_59 YceI-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002557 261.0
PJD3_k127_3138442_6 Uncharacterized ACR, YdiU/UPF0061 family - - - 1.18e-287 894.0
PJD3_k127_3138442_60 adenosylhomocysteine nucleosidase activity K01243,K03716 - 3.2.2.9,4.1.99.14 0.000000000000000000000000000000000000000000000000000000000000000000000001101 258.0
PJD3_k127_3138442_61 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002335 245.0
PJD3_k127_3138442_62 Uncharacterized conserved protein (DUF2183) - - - 0.00000000000000000000000000000000000000000000000000000000000000000005435 240.0
PJD3_k127_3138442_64 DNA-binding protein with PD1-like DNA-binding motif K06934 - - 0.000000000000000000000000000000000000000000000000000000000000003283 219.0
PJD3_k127_3138442_67 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000007951 215.0
PJD3_k127_3138442_68 2-hydroxychromene-2-carboxylate isomerase - - - 0.000000000000000000000000000000000000000000000000000000000001385 215.0
PJD3_k127_3138442_69 phosphinothricin N-acetyltransferase activity K09181 - - 0.0000000000000000000000000000000000000000000000000000002574 198.0
PJD3_k127_3138442_7 Belongs to the peptidase S8 family - - - 3.544e-281 872.0
PJD3_k127_3138442_72 YecM protein K09907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000002034 192.0
PJD3_k127_3138442_74 Protein of unknown function (DUF2489) - - - 0.00000000000000000000000000000000000000000000000002405 183.0
PJD3_k127_3138442_75 50S ribosomal protein L31 K02909 - - 0.0000000000000000000000000000000000000000001646 160.0
PJD3_k127_3138442_76 Protein of unknown function (DUF454) K09790 - - 0.000000000000000000000000000000000000000002987 160.0
PJD3_k127_3138442_77 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000000000000001063 145.0
PJD3_k127_3138442_79 iron ion homeostasis - - - 0.000000000000000000000000000000000004884 143.0
PJD3_k127_3138442_8 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 9.784e-275 856.0
PJD3_k127_3138442_83 Belongs to the UPF0250 family K09158 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000001736 119.0
PJD3_k127_3138442_84 Ribosomal protein L33 K02913 - - 0.0000000000000000000000000003927 114.0
PJD3_k127_3138442_85 Histidine kinase K07678 - 2.7.13.3 0.00000000000000000000000001508 112.0
PJD3_k127_3138442_86 Protein conserved in bacteria - - - 0.00000000000000000000000002823 110.0
PJD3_k127_3138442_87 protein serine/threonine phosphatase activity K20074 - 3.1.3.16 0.000000000000000000000002033 113.0
PJD3_k127_3138442_9 HD domain - - - 3.175e-261 809.0
PJD3_k127_3138442_94 Histidine kinase - - - 0.000000000313 69.0
PJD3_k127_3138442_95 Bacterial shufflon protein, N-terminal constant region - - - 0.000005857 59.0
PJD3_k127_3138442_98 lactoylglutathione lyase activity - - - 0.00006976 50.0
PJD3_k127_314788_0 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0 1632.0
PJD3_k127_314788_1 SMART helicase c2 K03722 - 3.6.4.12 0.0 1630.0
PJD3_k127_314788_10 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006828 548.0
PJD3_k127_314788_11 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00627,K00658 - 2.3.1.12,2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009683 553.0
PJD3_k127_314788_12 ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 557.0
PJD3_k127_314788_13 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 546.0
PJD3_k127_314788_14 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 533.0
PJD3_k127_314788_15 Belongs to the arginase family K01476 - 3.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007981 525.0
PJD3_k127_314788_16 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 516.0
PJD3_k127_314788_17 FecR protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 543.0
PJD3_k127_314788_18 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 521.0
PJD3_k127_314788_19 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 468.0
PJD3_k127_314788_2 Molecular chaperone. Has ATPase activity K04079 - - 0.0 1052.0
PJD3_k127_314788_20 Methyltransferase type 11 K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 465.0
PJD3_k127_314788_21 MatE K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005794 459.0
PJD3_k127_314788_22 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000049,GO:0000154,GO:0001510,GO:0002935,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016426,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070040,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:0140102,GO:1901360,GO:1901363 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007556 443.0
PJD3_k127_314788_23 Protein of unknown function (DUF2817) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 439.0
PJD3_k127_314788_24 inorganic diphosphatase activity K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 437.0
PJD3_k127_314788_25 NAD binding K00333,K13378 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 421.0
PJD3_k127_314788_26 TonB-dependent Receptor Plug K02014,K16092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 411.0
PJD3_k127_314788_27 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 390.0
PJD3_k127_314788_28 Spore Coat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 387.0
PJD3_k127_314788_29 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 367.0
PJD3_k127_314788_3 Outer membrane usher protein K07347 - - 1.89e-277 874.0
PJD3_k127_314788_30 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 366.0
PJD3_k127_314788_31 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 368.0
PJD3_k127_314788_33 radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 363.0
PJD3_k127_314788_34 deoxyribonuclease I activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008019 357.0
PJD3_k127_314788_35 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005814 354.0
PJD3_k127_314788_36 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009246 346.0
PJD3_k127_314788_37 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 337.0
PJD3_k127_314788_38 protein secretion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009478 349.0
PJD3_k127_314788_39 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 316.0
PJD3_k127_314788_4 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 9.763e-252 778.0
PJD3_k127_314788_40 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008907 312.0
PJD3_k127_314788_41 Putative zinc-binding metallo-peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006376 310.0
PJD3_k127_314788_42 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 303.0
PJD3_k127_314788_43 PFAM Asparaginase K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004956 290.0
PJD3_k127_314788_44 PFAM SEC-C motif domain protein K09858 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002371 261.0
PJD3_k127_314788_45 sigma factor antagonist activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005041 261.0
PJD3_k127_314788_46 Glycosyl transferase, family 2 K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001104 257.0
PJD3_k127_314788_47 nuclear chromosome segregation K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004109 264.0
PJD3_k127_314788_48 Pili and flagellar-assembly chaperone, PapD N-terminal domain K07346 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001529 254.0
PJD3_k127_314788_49 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001349 251.0
PJD3_k127_314788_5 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 9.245e-251 777.0
PJD3_k127_314788_50 Chaperone of endosialidase K21449 - - 0.00000000000000000000000000000000000000000000000000000000000000000002713 268.0
PJD3_k127_314788_51 Mazg nucleotide pyrophosphohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000003943 227.0
PJD3_k127_314788_52 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.0000000000000000000000000000000000000000000000000000000000000007814 220.0
PJD3_k127_314788_53 Fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000001294 216.0
PJD3_k127_314788_54 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000000000000000000001356 208.0
PJD3_k127_314788_57 Belongs to the anti-sigma-factor antagonist family - - - 0.000000000000000000000000000000000000000000000000000001972 194.0
PJD3_k127_314788_58 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000001651 194.0
PJD3_k127_314788_59 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.3.2.6 0.0000000000000000000000000000000000000000000000000001017 194.0
PJD3_k127_314788_6 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 1.148e-237 737.0
PJD3_k127_314788_62 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000000000000000000000000000000000000002225 182.0
PJD3_k127_314788_63 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000001618 180.0
PJD3_k127_314788_64 O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000001256 187.0
PJD3_k127_314788_65 PFAM metal-dependent phosphohydrolase, HD sub domain K01524,K07016 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000009595 179.0
PJD3_k127_314788_67 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.00000000000000000000000000000000000000002133 162.0
PJD3_k127_314788_7 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 4.468e-208 655.0
PJD3_k127_314788_70 - - - - 0.0000000000000000000000000000000000000000731 153.0
PJD3_k127_314788_71 Belongs to the BolA IbaG family - - - 0.0000000000000000000000000000000000000006244 150.0
PJD3_k127_314788_72 - - - - 0.00000000000000000000000000000000000002192 148.0
PJD3_k127_314788_74 Diphthamide synthase - - - 0.00000000000000000000000000000001018 135.0
PJD3_k127_314788_75 Protein conserved in bacteria K05952 - - 0.000000000000000000000000000007971 119.0
PJD3_k127_314788_79 Chaperone of endosialidase - - - 0.000000000000000000000859 111.0
PJD3_k127_314788_8 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 593.0
PJD3_k127_314788_81 Glycosyl transferase family 4 K02851 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0016740,GO:0016772,GO:0016780,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914 2.7.8.33,2.7.8.35 0.0000000000000000008083 99.0
PJD3_k127_314788_83 PFAM glycosyl transferase group 1 - - - 0.000000000000000008268 96.0
PJD3_k127_314788_84 energy transducer activity K03832,K07126 - - 0.0000000000000001933 85.0
PJD3_k127_314788_85 Transposase - - - 0.0000000000000004077 78.0
PJD3_k127_314788_86 Protein of unknown function, DUF393 - - - 0.00000000000003804 77.0
PJD3_k127_314788_88 cell wall surface anchor family protein K13735 - - 0.00000000007936 76.0
PJD3_k127_314788_9 YadA-like membrane anchor domain K12342 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 583.0
PJD3_k127_314788_90 Glycosyl transferases group 1 K13668 - 2.4.1.346 0.0000002254 62.0
PJD3_k127_314788_91 protein secretion K01218 - 3.2.1.78 0.0000006387 65.0
PJD3_k127_3274826_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 2160.0
PJD3_k127_3274826_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1467.0
PJD3_k127_3274826_10 TIGRFAM phosphonate ABC transporter, inner membrane subunit K02042 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 592.0
PJD3_k127_3274826_12 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 579.0
PJD3_k127_3274826_13 PFAM C-5 cytosine-specific DNA methylase K00558 - 2.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000655 578.0
PJD3_k127_3274826_14 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 574.0
PJD3_k127_3274826_15 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 581.0
PJD3_k127_3274826_16 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 560.0
PJD3_k127_3274826_18 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 525.0
PJD3_k127_3274826_19 Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl onto the lipoyl domains of lipoate-dependent enzymes K03800 - 6.3.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 500.0
PJD3_k127_3274826_2 Serine protein kinase K07180 - - 0.0 1316.0
PJD3_k127_3274826_21 aminopeptidase activity K05994 - 3.4.11.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006158 477.0
PJD3_k127_3274826_22 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006601 467.0
PJD3_k127_3274826_23 sulfurtransferase activity K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 467.0
PJD3_k127_3274826_24 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009378 452.0
PJD3_k127_3274826_25 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 408.0
PJD3_k127_3274826_26 MgtC family K07507 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 387.0
PJD3_k127_3274826_27 protein phosphatase 2C domain protein K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 381.0
PJD3_k127_3274826_28 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 356.0
PJD3_k127_3274826_3 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0 1147.0
PJD3_k127_3274826_30 Chemotaxis phosphatase CheX K03409 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 348.0
PJD3_k127_3274826_32 Histidine kinase K07716,K20974 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009562 334.0
PJD3_k127_3274826_33 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 325.0
PJD3_k127_3274826_34 Putative heavy-metal-binding K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004802 325.0
PJD3_k127_3274826_38 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000002038 257.0
PJD3_k127_3274826_39 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008007 252.0
PJD3_k127_3274826_4 PFAM SpoVR family protein K06415 - - 3.085e-292 900.0
PJD3_k127_3274826_41 Hsp20/alpha crystallin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006409 257.0
PJD3_k127_3274826_42 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000000006408 228.0
PJD3_k127_3274826_43 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000000000007208 198.0
PJD3_k127_3274826_44 FecR protein - - - 0.000000000000000000000000000000000000000003864 175.0
PJD3_k127_3274826_45 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000005815 151.0
PJD3_k127_3274826_46 Recombinase K06400 - - 0.0000000000000000000000000000000000000005836 167.0
PJD3_k127_3274826_5 ABC transporter transmembrane region K06147,K18890 - - 8.748e-271 844.0
PJD3_k127_3274826_6 ABC transporter transmembrane region K06147,K18889 - - 1.551e-243 763.0
PJD3_k127_3274826_7 Histidine kinase HAMP - - - 7.252e-227 714.0
PJD3_k127_3274826_8 Belongs to the UPF0229 family K09786 - - 7.718e-226 701.0
PJD3_k127_3274826_9 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00856,K00892,K03338 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008906,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.20,2.7.1.73,2.7.1.92 5.49e-218 683.0
PJD3_k127_330715_1 - - - - 0.0 1326.0
PJD3_k127_330715_10 acetyl-CoA hydrolase transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 606.0
PJD3_k127_330715_11 TIGRFAM fructose-1,6-bisphosphatase, class II K02446 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006717 592.0
PJD3_k127_330715_12 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009205 592.0
PJD3_k127_330715_13 PFAM MscS Mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004903 572.0
PJD3_k127_330715_14 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 552.0
PJD3_k127_330715_15 mevalonate kinase activity K00869,K00938 - 2.7.1.36,2.7.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 549.0
PJD3_k127_330715_16 transcription factor binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 556.0
PJD3_k127_330715_18 phosphoserine phosphatase SerB K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 529.0
PJD3_k127_330715_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695,K03696 - - 0.0 1256.0
PJD3_k127_330715_20 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 496.0
PJD3_k127_330715_21 PFAM glycoside hydrolase, family 3 domain protein K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 478.0
PJD3_k127_330715_22 mevalonate kinase activity K00054,K00869,K01641 - 1.1.1.88,2.3.3.10,2.7.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 461.0
PJD3_k127_330715_24 PFAM Band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 430.0
PJD3_k127_330715_25 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008426 405.0
PJD3_k127_330715_26 peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 404.0
PJD3_k127_330715_27 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K22110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 394.0
PJD3_k127_330715_28 decarboxylase K01597 - 4.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 381.0
PJD3_k127_330715_3 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin K14645 - - 0.0 1034.0
PJD3_k127_330715_30 Membrane-bound serine protease (ClpP class) K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 361.0
PJD3_k127_330715_31 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 347.0
PJD3_k127_330715_32 RNA methylase K07444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 334.0
PJD3_k127_330715_33 Domain of unknown function (DUF4423) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007605 317.0
PJD3_k127_330715_35 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 299.0
PJD3_k127_330715_36 NmrA-like family K19267 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 291.0
PJD3_k127_330715_37 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 286.0
PJD3_k127_330715_39 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003738 284.0
PJD3_k127_330715_40 Enoyl-CoA hydratase K20765 - 3.7.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000001006 273.0
PJD3_k127_330715_41 two component, sigma54 specific, transcriptional regulator, Fis family K08476 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003819 276.0
PJD3_k127_330715_42 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001797 240.0
PJD3_k127_330715_43 Leucine rich repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000001005 232.0
PJD3_k127_330715_44 cyclic nucleotide-binding K03321,K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000009641 225.0
PJD3_k127_330715_45 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000001303 231.0
PJD3_k127_330715_46 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000000000000005788 194.0
PJD3_k127_330715_47 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000004562 178.0
PJD3_k127_330715_48 cyclic nucleotide binding K10914 - - 0.00000000000000000000000000000000000000000000001284 174.0
PJD3_k127_330715_49 - - - - 0.00000000000000000000000000000000000000000000005656 175.0
PJD3_k127_330715_5 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 1.521e-230 719.0
PJD3_k127_330715_52 - - - - 0.0000000000000000000000000000000001883 135.0
PJD3_k127_330715_55 Transposase - - - 0.0000000000000004077 78.0
PJD3_k127_330715_58 Histidine kinase - - - 0.00000003244 66.0
PJD3_k127_330715_7 PFAM peptidase U32 K08303 - - 3.651e-198 623.0
PJD3_k127_330715_8 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 9.237e-196 619.0
PJD3_k127_330715_9 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 601.0
PJD3_k127_333768_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 498.0
PJD3_k127_333768_1 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.000000000000649 68.0
PJD3_k127_333768_2 Belongs to the ABC transporter superfamily K02010,K02017,K15497 - 3.6.3.29,3.6.3.30,3.6.3.55 0.000000006336 59.0
PJD3_k127_3340067_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000693 574.0
PJD3_k127_3340067_1 Protein kinase, ABC1 domain-containing - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 496.0
PJD3_k127_3340067_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 432.0
PJD3_k127_3340067_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000764 269.0
PJD3_k127_3340067_5 Lysine methyltransferase - - - 0.0000000000000000000000000000000000000000002759 167.0
PJD3_k127_3340067_6 Thioesterase superfamily - - - 0.000000000000000000000000000000001932 134.0
PJD3_k127_3340067_7 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000005112 87.0
PJD3_k127_3340067_9 - - - - 0.000001995 50.0
PJD3_k127_336026_0 malic protein domain protein K00029 - 1.1.1.40 0.0 1296.0
PJD3_k127_336026_1 Sodium:solute symporter family K03307 - - 1.749e-222 698.0
PJD3_k127_336026_2 Trypsin-like peptidase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 511.0
PJD3_k127_336026_3 LysR substrate binding domain K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 473.0
PJD3_k127_336026_4 DUF218 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009409 308.0
PJD3_k127_336026_5 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000000000000000000000000001087 222.0
PJD3_k127_3606916_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1795.0
PJD3_k127_3606916_1 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.0 1354.0
PJD3_k127_3606916_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 502.0
PJD3_k127_3606916_11 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 486.0
PJD3_k127_3606916_12 Belongs to the DegT DnrJ EryC1 family K19715 - 2.6.1.109 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000421 497.0
PJD3_k127_3606916_13 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs K05541 GO:0000049,GO:0000166,GO:0002943,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010181,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0032553,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 478.0
PJD3_k127_3606916_14 PFAM tRNA synthetase, class II (D, K and N) K04568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 451.0
PJD3_k127_3606916_15 PFAM Carbamoyltransferase K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 456.0
PJD3_k127_3606916_16 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 442.0
PJD3_k127_3606916_17 two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 419.0
PJD3_k127_3606916_18 response to abiotic stimulus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 438.0
PJD3_k127_3606916_19 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13310 - 2.6.1.106 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007885 406.0
PJD3_k127_3606916_2 Endoribonuclease that initiates mRNA decay K18682 - - 3.005e-287 887.0
PJD3_k127_3606916_20 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 406.0
PJD3_k127_3606916_21 DNA photolyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 406.0
PJD3_k127_3606916_22 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 375.0
PJD3_k127_3606916_23 chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009529 372.0
PJD3_k127_3606916_24 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000435 370.0
PJD3_k127_3606916_25 radical SAM domain protein K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005682 341.0
PJD3_k127_3606916_26 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 339.0
PJD3_k127_3606916_28 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 317.0
PJD3_k127_3606916_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.647e-279 862.0
PJD3_k127_3606916_30 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006565 308.0
PJD3_k127_3606916_31 PFAM Transketolase domain protein K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000034 292.0
PJD3_k127_3606916_33 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 296.0
PJD3_k127_3606916_34 amidinotransferase K00613 - 2.1.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002988 286.0
PJD3_k127_3606916_35 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001834 274.0
PJD3_k127_3606916_36 radical SAM domain protein K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002051 277.0
PJD3_k127_3606916_37 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001436 264.0
PJD3_k127_3606916_39 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008187 267.0
PJD3_k127_3606916_4 COG2931, RTX toxins and related Ca2 -binding proteins - - - 2.665e-243 793.0
PJD3_k127_3606916_40 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000001875 248.0
PJD3_k127_3606916_41 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002588 254.0
PJD3_k127_3606916_42 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000531 257.0
PJD3_k127_3606916_43 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000002181 246.0
PJD3_k127_3606916_44 - - - - 0.0000000000000000000000000000000000000000000000000000000000003366 213.0
PJD3_k127_3606916_45 transferase activity, transferring glycosyl groups K09691 - - 0.000000000000000000000000000000000000000000000000000000000001019 228.0
PJD3_k127_3606916_46 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000002242 215.0
PJD3_k127_3606916_47 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000001082 220.0
PJD3_k127_3606916_48 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000001433 211.0
PJD3_k127_3606916_49 family 3 K02030 - - 0.0000000000000000000000000000000000000000000000000000002045 201.0
PJD3_k127_3606916_5 PFAM CBS domain K03699 - - 1.909e-230 719.0
PJD3_k127_3606916_50 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000001958 201.0
PJD3_k127_3606916_51 Alcohol dehydrogenase GroES-like domain K00008,K00148,K18369 - 1.1.1.14,1.2.1.46 0.0000000000000000000000000000000000000000000000000001237 198.0
PJD3_k127_3606916_52 Belongs to the MIP aquaporin (TC 1.A.8) family K09874 GO:0003674,GO:0005215,GO:0005372,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006833,GO:0008150,GO:0015250,GO:0015267,GO:0015318,GO:0015840,GO:0016020,GO:0016021,GO:0019755,GO:0022803,GO:0022838,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042044,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000002053 192.0
PJD3_k127_3606916_53 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000000000000000000000000000007798 201.0
PJD3_k127_3606916_54 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000001431 166.0
PJD3_k127_3606916_55 radical SAM domain protein K03639 - 4.1.99.22 0.000000000000000000000000000000000000000001159 169.0
PJD3_k127_3606916_57 transferase activity, transferring glycosyl groups K09691 - - 0.0000000000000000000000000000000000000001326 167.0
PJD3_k127_3606916_58 domain, Protein K15125 - - 0.0000000000000000000000000000000000000005671 153.0
PJD3_k127_3606916_6 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 4.147e-228 707.0
PJD3_k127_3606916_60 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000009017 145.0
PJD3_k127_3606916_61 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000002118 147.0
PJD3_k127_3606916_62 transferase activity, transferring glycosyl groups K09691 - - 0.00000000000000000000000000000002698 140.0
PJD3_k127_3606916_67 Ferredoxin K04755 - - 0.00000000000000000007853 93.0
PJD3_k127_3606916_68 GDP-mannose mannosyl hydrolase activity K03574 - 3.6.1.55 0.000000000000000002779 90.0
PJD3_k127_3606916_69 Beta-eliminating lyase - - - 0.00000000000000006648 93.0
PJD3_k127_3606916_70 4Fe-4S single cluster domain - - - 0.0000000000000002259 91.0
PJD3_k127_3606916_71 lipolytic protein G-D-S-L family - - - 0.0000000000000002414 92.0
PJD3_k127_3606916_72 general secretion pathway protein K02456,K02459,K12285 - - 0.000000000000007625 87.0
PJD3_k127_3606916_74 Dolichol-phosphate mannosyltransferase K00721 GO:0000030,GO:0003674,GO:0003824,GO:0004169,GO:0004582,GO:0005488,GO:0005537,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006139,GO:0006464,GO:0006486,GO:0006493,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006720,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016093,GO:0016740,GO:0016757,GO:0016758,GO:0019348,GO:0019538,GO:0019637,GO:0019673,GO:0030246,GO:0031501,GO:0031984,GO:0032991,GO:0033185,GO:0034641,GO:0034645,GO:0035268,GO:0035269,GO:0036094,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0043170,GO:0043178,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046483,GO:0046486,GO:0046488,GO:0048029,GO:0055086,GO:0070085,GO:0071704,GO:0090407,GO:0097502,GO:0098827,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1902494,GO:1903509,GO:1990234 2.4.1.83 0.0000000000001282 79.0
PJD3_k127_3606916_76 Glycosyltransferase like family 2 - - - 0.00000001047 64.0
PJD3_k127_3606916_8 PFAM Metal-dependent phosphohydrolase, HD - - - 8.339e-200 627.0
PJD3_k127_3606916_9 transglycosylase K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 614.0
PJD3_k127_3657305_0 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 0.0 1172.0
PJD3_k127_3657305_1 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity - - - 0.0 1067.0
PJD3_k127_3657305_10 Chemotaxis sensory transducer K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009847 547.0
PJD3_k127_3657305_11 Histidine Phosphotransfer domain K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 492.0
PJD3_k127_3657305_12 Nadh flavin oxidoreductase nadh oxidase K10680 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 462.0
PJD3_k127_3657305_13 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 450.0
PJD3_k127_3657305_14 Binding-protein-dependent transport system inner membrane component K10110,K15772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 436.0
PJD3_k127_3657305_15 Belongs to the ABC transporter superfamily K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 421.0
PJD3_k127_3657305_16 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000944 405.0
PJD3_k127_3657305_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 372.0
PJD3_k127_3657305_18 LamB porin K02024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004838 345.0
PJD3_k127_3657305_19 Carboxylesterase family K03929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 337.0
PJD3_k127_3657305_2 Sugar ABC transporter permease K10109,K15770,K15771 - - 0.0 1043.0
PJD3_k127_3657305_20 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001642 291.0
PJD3_k127_3657305_21 Dolichol kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001305 276.0
PJD3_k127_3657305_22 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001609 286.0
PJD3_k127_3657305_23 Staphylococcal nuclease homologue K01174 - 3.1.31.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006862 271.0
PJD3_k127_3657305_24 SOS response associated peptidase (SRAP) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001862 266.0
PJD3_k127_3657305_25 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000022 265.0
PJD3_k127_3657305_26 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000001156 243.0
PJD3_k127_3657305_28 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000003116 233.0
PJD3_k127_3657305_29 PFAM MCP methyltransferase, CheR-type K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000169 230.0
PJD3_k127_3657305_3 Domain of unknown function (DUF3372) K01200 - 3.2.1.41 6.302e-308 966.0
PJD3_k127_3657305_30 Biogenesis protein K09792 - - 0.00000000000000000000000000000000000000000000000000000000000000645 223.0
PJD3_k127_3657305_33 MaoC like domain - - - 0.0000000000000000000000000000000000000000000000008141 184.0
PJD3_k127_3657305_34 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000007296 182.0
PJD3_k127_3657305_35 Bacterial-like globin - - - 0.0000000000000000000000000000000000000000000000681 172.0
PJD3_k127_3657305_36 FMN-binding domain protein - - - 0.00000000000000000000000000000000000000000004293 166.0
PJD3_k127_3657305_37 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000001647 166.0
PJD3_k127_3657305_38 Response regulator receiver - - - 0.000000000000000000000000000000000004536 141.0
PJD3_k127_3657305_39 Histidine kinase - - - 0.00000000000000000000000000000000001093 139.0
PJD3_k127_3657305_4 Penicillin amidase K01434 - 3.5.1.11 7.825e-263 831.0
PJD3_k127_3657305_40 PFAM RNA recognition motif - - - 0.00000000000000000000000000000000004008 136.0
PJD3_k127_3657305_41 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000001498 128.0
PJD3_k127_3657305_43 Putative quorum-sensing-regulated virulence factor K09954 - - 0.000000000000000000000000000005774 119.0
PJD3_k127_3657305_44 Transcriptional regulator - - - 0.0000000000000000000000000003686 119.0
PJD3_k127_3657305_45 Protein of unknown function (DUF2846) - - - 0.0000000000000000000000000009809 119.0
PJD3_k127_3657305_46 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000003739 111.0
PJD3_k127_3657305_47 - - - - 0.00000000000000005566 87.0
PJD3_k127_3657305_48 - - - - 0.00000000000006507 74.0
PJD3_k127_3657305_49 - - - - 0.000000000000893 72.0
PJD3_k127_3657305_5 Histidine kinase - - - 1.227e-229 732.0
PJD3_k127_3657305_50 - - - - 0.000009414 53.0
PJD3_k127_3657305_52 isochorismatase - - - 0.0007086 50.0
PJD3_k127_3657305_53 FMN_bind - - - 0.0007132 48.0
PJD3_k127_3657305_6 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 9.863e-211 673.0
PJD3_k127_3657305_7 PFAM Sulfate transporter family K03321 - - 9.979e-208 658.0
PJD3_k127_3657305_8 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 3.325e-202 662.0
PJD3_k127_3657305_9 PFAM alpha amylase, catalytic region K01176 - 3.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007912 579.0
PJD3_k127_3769275_0 PAS fold K07709,K19694 - 2.7.13.3 5.083e-260 813.0
PJD3_k127_3769275_1 Belongs to the 5'-nucleotidase family K01119 - 3.1.3.6,3.1.4.16 2.66e-221 697.0
PJD3_k127_3769275_10 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 394.0
PJD3_k127_3769275_11 Elongator protein 3, MiaB family, Radical SAM K06937 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 399.0
PJD3_k127_3769275_12 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008795 310.0
PJD3_k127_3769275_13 protein trimerization - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003808 283.0
PJD3_k127_3769275_14 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007352 260.0
PJD3_k127_3769275_15 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000538 258.0
PJD3_k127_3769275_16 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001311 241.0
PJD3_k127_3769275_17 Enoyl-(Acyl carrier protein) reductase K00034,K03366 - 1.1.1.304,1.1.1.47,1.1.1.76 0.0000000000000000000000000000000000000000000000000000000000000000001207 238.0
PJD3_k127_3769275_18 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000004537 236.0
PJD3_k127_3769275_19 Metal-dependent hydrolase K07043 - - 0.0000000000000000000000000000000000000000000000000000000000002221 215.0
PJD3_k127_3769275_2 tail collar domain protein - - - 7.46e-221 718.0
PJD3_k127_3769275_20 Sigma 54 modulation protein / S30EA ribosomal protein K05808 GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000000001004 150.0
PJD3_k127_3769275_21 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000006206 139.0
PJD3_k127_3769275_23 Pre-toxin TG - - - 0.000000000000000000001587 111.0
PJD3_k127_3769275_24 Iron-sulfur cluster-binding domain - - - 0.000000000000000000002222 106.0
PJD3_k127_3769275_25 Cupin-like domain - - - 0.00000000000000000000274 105.0
PJD3_k127_3769275_26 Cupin-like domain K10277 - 1.14.11.27 0.000000000000000000003037 104.0
PJD3_k127_3769275_27 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000001823 100.0
PJD3_k127_3769275_28 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity K02372,K16363 - 3.5.1.108,4.2.1.59 0.00000000000000000007552 95.0
PJD3_k127_3769275_29 - - - - 0.0000000000002096 81.0
PJD3_k127_3769275_3 Vitamin K-dependent gamma-carboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008052 606.0
PJD3_k127_3769275_30 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00059 - 1.1.1.100 0.00000000001181 74.0
PJD3_k127_3769275_31 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0000000000414 73.0
PJD3_k127_3769275_32 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000007631 61.0
PJD3_k127_3769275_33 protein secretion K08651 - 3.4.21.66 0.000001778 63.0
PJD3_k127_3769275_34 Uncharacterised nucleotidyltransferase - - - 0.000002183 59.0
PJD3_k127_3769275_35 Phosphopantetheine attachment site - - - 0.000003105 54.0
PJD3_k127_3769275_36 Helix-turn-helix domain - - - 0.000003517 51.0
PJD3_k127_3769275_37 Belongs to the peptidase C2 family - - - 0.000008362 59.0
PJD3_k127_3769275_38 Patched family K07003 - - 0.00001329 58.0
PJD3_k127_3769275_4 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 525.0
PJD3_k127_3769275_41 alpha-L-arabinofuranosidase - - - 0.0001089 57.0
PJD3_k127_3769275_42 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.0001194 53.0
PJD3_k127_3769275_43 signal peptide processing K13280 - 3.4.21.89 0.0002345 49.0
PJD3_k127_3769275_44 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0006644 51.0
PJD3_k127_3769275_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000743 496.0
PJD3_k127_3769275_6 GHMP kinases N terminal domain K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007035 484.0
PJD3_k127_3769275_7 COG1770 Protease II K01354 - 3.4.21.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007379 495.0
PJD3_k127_3769275_8 Belongs to the peptidase S1B family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 398.0
PJD3_k127_3769275_9 Thymidine kinase K00857 - 2.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 394.0
PJD3_k127_4177669_0 Asparagine synthase K01953 - 6.3.5.4 6.12e-291 898.0
PJD3_k127_4177669_1 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 462.0
PJD3_k127_4177669_10 inositol 2-dehydrogenase activity K00067 - 1.1.1.133 0.000000000000000000000000000000001177 142.0
PJD3_k127_4177669_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 312.0
PJD3_k127_4177669_3 Ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 308.0
PJD3_k127_4177669_4 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004746 312.0
PJD3_k127_4177669_5 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 285.0
PJD3_k127_4177669_6 SMART Transcription regulator, AsnC-type K03718,K03719 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000421 257.0
PJD3_k127_4177669_8 O-methyltransferase K00588 - 2.1.1.104 0.0000000000000000000000000000000000000000000000000000000000000001975 226.0
PJD3_k127_4177669_9 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000005214 220.0
PJD3_k127_4246632_0 atpase related to the helicase subunit of the holliday junction resolvase - - - 3.454e-232 752.0
PJD3_k127_4246632_1 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 367.0
PJD3_k127_4246632_3 Haemolysin-III related K11068 - - 0.000000000000000000000000000000000000000000000000000000004521 204.0
PJD3_k127_4246632_4 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000001985 133.0
PJD3_k127_4246632_5 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.000000000000000000948 88.0
PJD3_k127_4246632_6 - - - - 0.00000000000001174 87.0
PJD3_k127_4454335_0 Belongs to the heme-copper respiratory oxidase family K00404,K15862 - 1.9.3.1 0.0 1179.0
PJD3_k127_4454335_1 N-terminal domain of cytochrome oxidase-cbb3, FixP K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 350.0
PJD3_k127_4454335_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000058 214.0
PJD3_k127_44551_0 Belongs to the 'phage' integrase family K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005703 270.0
PJD3_k127_44551_1 Belongs to the 'phage' integrase family K04763 - - 0.00000000000000000006548 91.0
PJD3_k127_44551_2 - - - - 0.00000001049 63.0
PJD3_k127_44551_3 - - - - 0.0000006161 56.0
PJD3_k127_4494206_0 metal-dependent phosphohydrolase HD region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 550.0
PJD3_k127_4494206_1 Gram-negative porin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 514.0
PJD3_k127_4494206_10 antisigma factor binding K04749,K06378 - - 0.0000000000000000000000000000000000000000000000000000000002145 205.0
PJD3_k127_4494206_2 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 445.0
PJD3_k127_4494206_3 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 330.0
PJD3_k127_4494206_4 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005481 330.0
PJD3_k127_4494206_5 SAM-dependent RNA methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 314.0
PJD3_k127_4494206_6 PFAM Cache - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001165 244.0
PJD3_k127_4494206_7 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000001664 237.0
PJD3_k127_4494206_8 ribosome binding K02860 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000001835 229.0
PJD3_k127_4494206_9 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000003373 210.0
PJD3_k127_4618124_0 Methionine synthase B12-binding module cap domain protein K00548 - 2.1.1.13 0.0 1971.0
PJD3_k127_4618124_1 helicase domain protein - - - 0.0 1635.0
PJD3_k127_4618124_10 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 3.203e-265 819.0
PJD3_k127_4618124_11 repeat-containing protein - - - 1.785e-251 789.0
PJD3_k127_4618124_12 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 2.735e-246 771.0
PJD3_k127_4618124_13 Cys Met metabolism K01739,K01758 - 2.5.1.48,4.4.1.1 1.603e-225 701.0
PJD3_k127_4618124_14 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 4.805e-218 686.0
PJD3_k127_4618124_15 Cupin domain - - - 6.148e-207 651.0
PJD3_k127_4618124_16 Glutamate-cysteine ligase K01919 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 600.0
PJD3_k127_4618124_17 Binding-protein-dependent transport systems inner membrane component K13895 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 594.0
PJD3_k127_4618124_18 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006651 602.0
PJD3_k127_4618124_19 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 606.0
PJD3_k127_4618124_2 helicase superfamily c-terminal domain K17675 - 3.6.4.13 0.0 1392.0
PJD3_k127_4618124_20 PFAM binding-protein-dependent transport systems inner membrane component K13894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 583.0
PJD3_k127_4618124_21 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 579.0
PJD3_k127_4618124_22 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000991 573.0
PJD3_k127_4618124_23 PFAM Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 559.0
PJD3_k127_4618124_24 Belongs to the methyltransferase superfamily K07444,K12297 - 2.1.1.173,2.1.1.264 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 557.0
PJD3_k127_4618124_25 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033,K15585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 535.0
PJD3_k127_4618124_26 ATP:ADP antiporter activity K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008292 539.0
PJD3_k127_4618124_27 Nitronate monooxygenase K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004512 527.0
PJD3_k127_4618124_28 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008036 528.0
PJD3_k127_4618124_29 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 524.0
PJD3_k127_4618124_3 Peptidase family M3 K01284 - 3.4.15.5 0.0 1138.0
PJD3_k127_4618124_30 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005424 518.0
PJD3_k127_4618124_32 PAS sensor protein K03406,K03776 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 514.0
PJD3_k127_4618124_33 transferase activity, transferring glycosyl groups K00713,K06338 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 473.0
PJD3_k127_4618124_34 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 467.0
PJD3_k127_4618124_36 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 457.0
PJD3_k127_4618124_37 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 458.0
PJD3_k127_4618124_38 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 438.0
PJD3_k127_4618124_39 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843,K02849 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008611 434.0
PJD3_k127_4618124_4 acyl-coa dehydrogenase K09456,K20035 - - 0.0 1042.0
PJD3_k127_4618124_40 Aldose 1-epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002931 424.0
PJD3_k127_4618124_41 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 419.0
PJD3_k127_4618124_42 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 415.0
PJD3_k127_4618124_43 Protein of unknown function (DUF455) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009548 407.0
PJD3_k127_4618124_44 Adventurous gliding motility protein R - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 392.0
PJD3_k127_4618124_45 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 377.0
PJD3_k127_4618124_46 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 371.0
PJD3_k127_4618124_47 PFAM peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 365.0
PJD3_k127_4618124_49 inositol monophosphate 1-phosphatase activity K01082,K01092 - 3.1.3.25,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006169 359.0
PJD3_k127_4618124_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0 1013.0
PJD3_k127_4618124_50 metal-dependent phosphohydrolase, HD sub domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 352.0
PJD3_k127_4618124_51 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 345.0
PJD3_k127_4618124_52 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 340.0
PJD3_k127_4618124_53 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 335.0
PJD3_k127_4618124_54 Helix-turn-helix diphteria tox regulatory element - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 323.0
PJD3_k127_4618124_55 COG0003 Oxyanion-translocating ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007912 326.0
PJD3_k127_4618124_57 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 317.0
PJD3_k127_4618124_59 Sodium/hydrogen exchanger family K11105 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006582 306.0
PJD3_k127_4618124_6 Bacterial extracellular solute-binding proteins, family 5 Middle K13893 - - 0.0 1000.0
PJD3_k127_4618124_60 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12976,K22110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006311 291.0
PJD3_k127_4618124_61 PFAM Endonuclease Exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001465 274.0
PJD3_k127_4618124_64 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001006 258.0
PJD3_k127_4618124_65 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004478 243.0
PJD3_k127_4618124_67 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000002442 228.0
PJD3_k127_4618124_68 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000003322 234.0
PJD3_k127_4618124_7 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 8.498e-287 892.0
PJD3_k127_4618124_71 regulator - - - 0.0000000000000000000000000000000000000000000000000000000001894 204.0
PJD3_k127_4618124_72 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000004226 204.0
PJD3_k127_4618124_73 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000005158 199.0
PJD3_k127_4618124_76 - - - - 0.0000000000000000000000000000000000000000000000000003655 188.0
PJD3_k127_4618124_77 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000001016 195.0
PJD3_k127_4618124_78 ATPase activity K02013,K16786,K16787 - 3.6.3.34 0.0000000000000000000000000000000000000000000000005453 183.0
PJD3_k127_4618124_79 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000003258 152.0
PJD3_k127_4618124_8 extracellular solute-binding protein, family 5 K02035,K13893 - - 1.703e-284 882.0
PJD3_k127_4618124_83 GDP-mannose mannosyl hydrolase activity K01515,K03574,K08310,K19965 - 3.6.1.13,3.6.1.55,3.6.1.67 0.00000000000000000000000000000000006321 137.0
PJD3_k127_4618124_87 Sodium/hydrogen exchanger family K11105 - - 0.00000000000000000000001303 102.0
PJD3_k127_4618124_9 Belongs to the cysteine synthase cystathionine beta- synthase family K01697 - 4.2.1.22 2.476e-275 849.0
PJD3_k127_4654726_0 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 1.05e-297 932.0
PJD3_k127_4654726_1 Belongs to the heme-copper respiratory oxidase family K00404,K15862 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007276 267.0
PJD3_k127_4654726_2 AMP binding K09118,K13693 - 2.4.1.266 0.000000000000000000000000000000000000002144 151.0
PJD3_k127_4654726_3 PFAM Cyclic nucleotide-binding K10914 - - 0.000000000000000000000000000000000000005646 146.0
PJD3_k127_4654726_4 cyclic nucleotide binding K10914 - - 0.00000000000000000000000000000000006379 136.0
PJD3_k127_4654726_5 cytochrome oxidase maturation protein cbb3-type - - - 0.0000000000000000001547 91.0
PJD3_k127_4702021_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0 5851.0
PJD3_k127_4702021_10 Serine Threonine protein kinase K12132 - 2.7.11.1 1.621e-279 872.0
PJD3_k127_4702021_100 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000009335 237.0
PJD3_k127_4702021_103 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000000000000000000000005828 228.0
PJD3_k127_4702021_105 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891,K15546 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000000000000005046 220.0
PJD3_k127_4702021_106 amino acid transport K02030 - - 0.000000000000000000000000000000000000000000000000000000000000005505 225.0
PJD3_k127_4702021_107 TIGRFAM para-aminobenzoate synthase, subunit I K01665,K03342 - 2.6.1.85,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000001482 227.0
PJD3_k127_4702021_108 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus K04760 - - 0.000000000000000000000000000000000000000000000000000000000000162 215.0
PJD3_k127_4702021_109 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000001753 213.0
PJD3_k127_4702021_11 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 1.41e-265 822.0
PJD3_k127_4702021_110 Telomere recombination K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000001898 214.0
PJD3_k127_4702021_111 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000000000000000000000000000000000005324 209.0
PJD3_k127_4702021_112 Sigma 54 modulation protein / S30EA ribosomal protein K05808 - - 0.000000000000000000000000000000000000000000000000000000000008471 209.0
PJD3_k127_4702021_113 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000004431 210.0
PJD3_k127_4702021_114 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000000000000007746 208.0
PJD3_k127_4702021_115 protein import - - - 0.000000000000000000000000000000000000000000000000000000005222 207.0
PJD3_k127_4702021_116 lipopolysaccharide transmembrane transporter activity K07058 - - 0.000000000000000000000000000000000000000000000000000000006022 210.0
PJD3_k127_4702021_117 RDD family - - - 0.000000000000000000000000000000000000000000000000000000007215 204.0
PJD3_k127_4702021_119 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000009498 197.0
PJD3_k127_4702021_120 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000000000000000000000000000000000000001136 202.0
PJD3_k127_4702021_121 cell cycle K05589,K12065,K13052 - - 0.0000000000000000000000000000000000000000000000000000003125 205.0
PJD3_k127_4702021_125 Protein of unknown function (DUF1275) - - - 0.0000000000000000000000000000000000000000000000002389 184.0
PJD3_k127_4702021_126 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000004043 202.0
PJD3_k127_4702021_127 bis(5'-adenosyl)-triphosphatase activity - - - 0.000000000000000000000000000000000000000000000004478 174.0
PJD3_k127_4702021_128 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000006196 169.0
PJD3_k127_4702021_13 HD domain K06885 - - 2.622e-259 804.0
PJD3_k127_4702021_130 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000007803 171.0
PJD3_k127_4702021_131 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000005865 160.0
PJD3_k127_4702021_132 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000004905 168.0
PJD3_k127_4702021_134 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus - - - 0.00000000000000000000000000000000000000001383 158.0
PJD3_k127_4702021_135 - - - - 0.00000000000000000000000000000000000000002074 156.0
PJD3_k127_4702021_138 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000001687 150.0
PJD3_k127_4702021_139 Translation initiation factor SUI1 K03113 - - 0.0000000000000000000000000000000000000003237 151.0
PJD3_k127_4702021_14 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 7.531e-252 779.0
PJD3_k127_4702021_141 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000002672 147.0
PJD3_k127_4702021_142 PFAM glycosyl transferase family 9 - - - 0.000000000000000000000000000000000001496 142.0
PJD3_k127_4702021_143 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000000000000000046 134.0
PJD3_k127_4702021_144 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000007799 134.0
PJD3_k127_4702021_145 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000129 141.0
PJD3_k127_4702021_146 Glycosyltransferase, group 1 family protein K12995 - 2.4.1.348 0.00000000000000000000000000000003785 139.0
PJD3_k127_4702021_148 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.0000000000000000000000000002464 114.0
PJD3_k127_4702021_15 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 7.119e-251 779.0
PJD3_k127_4702021_150 Resolvase, N terminal domain - - - 0.00000000000000000000000000226 117.0
PJD3_k127_4702021_151 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000002949 107.0
PJD3_k127_4702021_153 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000014 95.0
PJD3_k127_4702021_155 Glycosyltransferase Family 4 - - - 0.00000000000000000116 98.0
PJD3_k127_4702021_157 Methionine biosynthesis protein MetW - - - 0.0000000000000001921 88.0
PJD3_k127_4702021_158 Glycosyl transferases group 1 K12989 - - 0.0000000000000002398 91.0
PJD3_k127_4702021_16 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 8.114e-238 738.0
PJD3_k127_4702021_160 - - - - 0.000000000000002484 78.0
PJD3_k127_4702021_163 - - - - 0.00000000002944 69.0
PJD3_k127_4702021_164 Glycosyl transferase 4-like domain - - - 0.00000002427 66.0
PJD3_k127_4702021_165 polysaccharide export K01991 - - 0.000002669 56.0
PJD3_k127_4702021_167 Psort location CytoplasmicMembrane, score - - - 0.00001939 57.0
PJD3_k127_4702021_17 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 2.231e-235 731.0
PJD3_k127_4702021_170 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.00005226 54.0
PJD3_k127_4702021_18 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 2.089e-230 719.0
PJD3_k127_4702021_19 RimK-like ATPgrasp N-terminal domain - - - 8.138e-230 721.0
PJD3_k127_4702021_2 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1245.0
PJD3_k127_4702021_20 PFAM acyl-CoA dehydrogenase domain protein K00253 - 1.3.8.4 1.815e-228 710.0
PJD3_k127_4702021_21 acyl-coa dehydrogenase K00248 - 1.3.8.1 5.527e-228 708.0
PJD3_k127_4702021_22 Belongs to the peptidase S41A family K03797 - 3.4.21.102 2.804e-215 676.0
PJD3_k127_4702021_23 Histidine kinase-like ATPases K03407 - 2.7.13.3 7.641e-211 681.0
PJD3_k127_4702021_24 Belongs to the thiolase family K00626 - 2.3.1.9 2.23e-209 655.0
PJD3_k127_4702021_25 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 4.8e-209 657.0
PJD3_k127_4702021_27 Na dependent nucleoside transporter K03317 - - 4.456e-205 644.0
PJD3_k127_4702021_28 acyl-coa dehydrogenase - - - 8.499e-203 635.0
PJD3_k127_4702021_29 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 6.165e-201 627.0
PJD3_k127_4702021_3 PLD-like domain - - - 0.0 1085.0
PJD3_k127_4702021_30 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 2.094e-197 619.0
PJD3_k127_4702021_31 EXOIII K03763 - 2.7.7.7 6.359e-197 622.0
PJD3_k127_4702021_32 PFAM DAHP synthetase I KDSA K01626,K03856,K04516,K13853 - 2.5.1.54,5.4.99.5 1.262e-195 615.0
PJD3_k127_4702021_33 cyclic nucleotide binding K10914 - - 6.013e-195 611.0
PJD3_k127_4702021_34 Sigma-54 interaction domain K02584,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 613.0
PJD3_k127_4702021_35 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 601.0
PJD3_k127_4702021_36 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104 589.0
PJD3_k127_4702021_37 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 584.0
PJD3_k127_4702021_38 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 565.0
PJD3_k127_4702021_39 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 562.0
PJD3_k127_4702021_4 UvrD-like helicase C-terminal domain - - - 0.0 1079.0
PJD3_k127_4702021_40 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 562.0
PJD3_k127_4702021_41 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 543.0
PJD3_k127_4702021_42 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004948 533.0
PJD3_k127_4702021_43 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007836 539.0
PJD3_k127_4702021_44 PFAM permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 531.0
PJD3_k127_4702021_45 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 527.0
PJD3_k127_4702021_46 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 526.0
PJD3_k127_4702021_47 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000538 518.0
PJD3_k127_4702021_48 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 517.0
PJD3_k127_4702021_49 signal peptide peptidase K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 488.0
PJD3_k127_4702021_5 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1004.0
PJD3_k127_4702021_50 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 482.0
PJD3_k127_4702021_52 PFAM OmpA MotB domain protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 467.0
PJD3_k127_4702021_53 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 461.0
PJD3_k127_4702021_54 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009982 441.0
PJD3_k127_4702021_55 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 439.0
PJD3_k127_4702021_56 Predicted membrane protein (DUF2232) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 437.0
PJD3_k127_4702021_57 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 430.0
PJD3_k127_4702021_58 PFAM ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006711 417.0
PJD3_k127_4702021_59 PFAM MotA TolQ ExbB proton channel K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 415.0
PJD3_k127_4702021_6 ABC transporter K06158 - - 4.533e-317 974.0
PJD3_k127_4702021_61 Domain of unknown function (DUF4339) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 406.0
PJD3_k127_4702021_62 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 405.0
PJD3_k127_4702021_63 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 401.0
PJD3_k127_4702021_65 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 394.0
PJD3_k127_4702021_67 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 391.0
PJD3_k127_4702021_68 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 378.0
PJD3_k127_4702021_7 DNA polymerase type-B family K02336 - 2.7.7.7 1.304e-312 974.0
PJD3_k127_4702021_74 MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 340.0
PJD3_k127_4702021_76 Binds together with S18 to 16S ribosomal RNA K01754,K02963,K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009566 335.0
PJD3_k127_4702021_77 RNA pseudouridylate synthase K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 335.0
PJD3_k127_4702021_78 TIGRFAM channel protein, hemolysin III family K11068 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 327.0
PJD3_k127_4702021_79 Prephenate dehydrogenase K00210 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007771 328.0
PJD3_k127_4702021_8 ribonuclease Rne Rng family K08301 - - 1.742e-312 960.0
PJD3_k127_4702021_80 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 323.0
PJD3_k127_4702021_81 DNA-directed DNA polymerase activity K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 319.0
PJD3_k127_4702021_82 LysM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000588 308.0
PJD3_k127_4702021_83 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005966 304.0
PJD3_k127_4702021_85 Histidine kinase K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 298.0
PJD3_k127_4702021_87 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001064 282.0
PJD3_k127_4702021_88 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006032 275.0
PJD3_k127_4702021_89 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006522 270.0
PJD3_k127_4702021_9 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.05e-301 935.0
PJD3_k127_4702021_90 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009334 271.0
PJD3_k127_4702021_91 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001133 269.0
PJD3_k127_4702021_92 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004092 283.0
PJD3_k127_4702021_93 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001241 268.0
PJD3_k127_4702021_94 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001543 267.0
PJD3_k127_4702021_95 Peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000002458 258.0
PJD3_k127_4702021_96 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001165 267.0
PJD3_k127_4702021_97 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000002264 258.0
PJD3_k127_4702021_98 TonB family K03646,K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000302 258.0
PJD3_k127_4702021_99 peptidase K21471 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004991 259.0
PJD3_k127_470969_0 glycosyltransferase 36 associated K00702,K13688 - 2.4.1.20 0.0 1446.0
PJD3_k127_470969_1 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000006905 127.0
PJD3_k127_470969_2 Short C-terminal domain K08982 - - 0.0000000000000000000002259 98.0
PJD3_k127_470969_3 Belongs to the ompA family - - - 0.0000000000000000001245 102.0
PJD3_k127_470969_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000001962 90.0
PJD3_k127_470969_5 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000007073 80.0
PJD3_k127_470969_6 Belongs to the UPF0337 (CsbD) family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00002975 49.0
PJD3_k127_4749232_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2540.0
PJD3_k127_4749232_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2530.0
PJD3_k127_4749232_10 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000006179 180.0
PJD3_k127_4749232_11 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000004715 107.0
PJD3_k127_4749232_12 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000004611 87.0
PJD3_k127_4749232_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1168.0
PJD3_k127_4749232_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005709 406.0
PJD3_k127_4749232_4 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 332.0
PJD3_k127_4749232_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001925 278.0
PJD3_k127_4749232_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009127 261.0
PJD3_k127_4749232_7 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003782 239.0
PJD3_k127_4749232_8 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000000000001463 239.0
PJD3_k127_4749232_9 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000005053 195.0
PJD3_k127_4811313_1 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1770.0
PJD3_k127_4811313_10 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0 1058.0
PJD3_k127_4811313_100 General secretion pathway protein C K02452 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007287 385.0
PJD3_k127_4811313_101 NADPH-dependent FMN reductase K00299,K11811 - 1.5.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 362.0
PJD3_k127_4811313_102 PFAM response regulator receiver K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 359.0
PJD3_k127_4811313_103 PFAM metal-dependent phosphohydrolase, HD sub domain K01524,K07016 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 370.0
PJD3_k127_4811313_104 transcriptional regulator, MerR family K22491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006394 363.0
PJD3_k127_4811313_105 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000594 357.0
PJD3_k127_4811313_106 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 355.0
PJD3_k127_4811313_107 glycolate biosynthetic process K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 350.0
PJD3_k127_4811313_109 Glutamyl-tRNAGlu reductase, N-terminal domain K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 347.0
PJD3_k127_4811313_11 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0 1000.0
PJD3_k127_4811313_110 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000377 342.0
PJD3_k127_4811313_111 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 341.0
PJD3_k127_4811313_112 S1/P1 Nuclease K05986 - 3.1.30.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 340.0
PJD3_k127_4811313_113 PFAM ATPase associated with various cellular activities, AAA_3 K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000808 342.0
PJD3_k127_4811313_114 YbbR-like protein - GO:0008150,GO:0031279,GO:0031281,GO:0043085,GO:0044093,GO:0045761,GO:0045762,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 341.0
PJD3_k127_4811313_115 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009996 335.0
PJD3_k127_4811313_117 glycerophosphodiester phosphodiesterase activity K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 336.0
PJD3_k127_4811313_118 Benzoate membrane transport protein K05782 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 339.0
PJD3_k127_4811313_119 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 330.0
PJD3_k127_4811313_12 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 1.28e-301 933.0
PJD3_k127_4811313_120 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 333.0
PJD3_k127_4811313_121 PFAM DSBA oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 327.0
PJD3_k127_4811313_122 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 327.0
PJD3_k127_4811313_125 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 325.0
PJD3_k127_4811313_126 Protein of unknown function (DUF3050) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 317.0
PJD3_k127_4811313_127 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 321.0
PJD3_k127_4811313_128 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 306.0
PJD3_k127_4811313_13 Arginyl-tRNA synthetase K01887 - 6.1.1.19 2.376e-296 918.0
PJD3_k127_4811313_130 PFAM metal-dependent phosphohydrolase, HD sub domain K01524,K07016 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 315.0
PJD3_k127_4811313_131 epimerase dehydratase K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004868 309.0
PJD3_k127_4811313_132 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 302.0
PJD3_k127_4811313_133 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006103 303.0
PJD3_k127_4811313_134 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 298.0
PJD3_k127_4811313_135 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007293 308.0
PJD3_k127_4811313_137 PFAM multiple antibiotic resistance (MarC)-related protein K05595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 292.0
PJD3_k127_4811313_139 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008889 289.0
PJD3_k127_4811313_14 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 1.39e-273 846.0
PJD3_k127_4811313_140 Nitroreductase family K10679 - 1.5.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 287.0
PJD3_k127_4811313_141 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004111 277.0
PJD3_k127_4811313_143 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006707 280.0
PJD3_k127_4811313_144 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008195 274.0
PJD3_k127_4811313_145 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001797 276.0
PJD3_k127_4811313_146 signal-transduction protein containing cAMP-binding and CBS domains K00031,K02342,K14446 - 1.1.1.42,1.3.1.85,2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001582 279.0
PJD3_k127_4811313_147 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002441 273.0
PJD3_k127_4811313_148 deoxyribonuclease I activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004552 274.0
PJD3_k127_4811313_149 Domain of unknown function (DUF1768) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000791 271.0
PJD3_k127_4811313_15 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 1.764e-265 822.0
PJD3_k127_4811313_151 Histidine kinase K07679,K21025 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003001 272.0
PJD3_k127_4811313_152 deoxyribonuclease I activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001097 270.0
PJD3_k127_4811313_154 acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000000000000000000001293 258.0
PJD3_k127_4811313_156 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004301 256.0
PJD3_k127_4811313_157 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000003002 256.0
PJD3_k127_4811313_158 Prokaryotic N-terminal methylation motif K02457 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006414 248.0
PJD3_k127_4811313_159 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001736 255.0
PJD3_k127_4811313_16 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 3.356e-263 814.0
PJD3_k127_4811313_160 Thioesterase superfamily K10806 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001467 240.0
PJD3_k127_4811313_161 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008313 238.0
PJD3_k127_4811313_162 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000001002 259.0
PJD3_k127_4811313_163 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000000000000003962 238.0
PJD3_k127_4811313_164 general secretion pathway protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000000000000000006466 237.0
PJD3_k127_4811313_165 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000001139 242.0
PJD3_k127_4811313_167 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000000000000000000000000000000000000000002849 229.0
PJD3_k127_4811313_168 Protein of unknown function (DUF3015) - - - 0.000000000000000000000000000000000000000000000000000000000000000006908 227.0
PJD3_k127_4811313_169 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.0000000000000000000000000000000000000000000000000000000000000007597 223.0
PJD3_k127_4811313_17 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 2.365e-262 819.0
PJD3_k127_4811313_170 Protein conserved in bacteria - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0044425,GO:0044459,GO:0044464,GO:0071575,GO:0071944,GO:0098552 - 0.0000000000000000000000000000000000000000000000000000000000000008455 225.0
PJD3_k127_4811313_171 Bacterial protein of unknown function (YtfJ_HI0045) K07109 - - 0.000000000000000000000000000000000000000000000000000000000000002454 221.0
PJD3_k127_4811313_173 general secretion pathway protein K02246,K02457,K02458 - - 0.0000000000000000000000000000000000000000000000000000000000002543 215.0
PJD3_k127_4811313_174 - - - - 0.0000000000000000000000000000000000000000000000000000000000003005 220.0
PJD3_k127_4811313_176 Single Cache domain 2 K03406 - - 0.000000000000000000000000000000000000000000000000000000000007374 209.0
PJD3_k127_4811313_177 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000000007723 209.0
PJD3_k127_4811313_18 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 2.113e-260 807.0
PJD3_k127_4811313_180 - - - - 0.000000000000000000000000000000000000000000000000000000000168 209.0
PJD3_k127_4811313_181 - - - - 0.0000000000000000000000000000000000000000000000000000000002933 207.0
PJD3_k127_4811313_182 EVE domain - - - 0.0000000000000000000000000000000000000000000000000000000007365 204.0
PJD3_k127_4811313_183 PFAM Fatty acid hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000397 207.0
PJD3_k127_4811313_185 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000006239 197.0
PJD3_k127_4811313_186 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000009917 199.0
PJD3_k127_4811313_187 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000000000000000003881 196.0
PJD3_k127_4811313_188 Histidine kinase K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000004148 205.0
PJD3_k127_4811313_189 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000008464 194.0
PJD3_k127_4811313_19 PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic K01886 - 6.1.1.18 6.511e-259 808.0
PJD3_k127_4811313_190 Bacterial-like globin K06886 - - 0.000000000000000000000000000000000000000000000000000001048 196.0
PJD3_k127_4811313_191 palmitoyl-(protein) hydrolase activity K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000001367 200.0
PJD3_k127_4811313_192 MerC mercury resistance protein - - - 0.000000000000000000000000000000000000000000000000000004228 193.0
PJD3_k127_4811313_193 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000003184 197.0
PJD3_k127_4811313_194 Ankyrin repeat K06867,K21440 - - 0.00000000000000000000000000000000000000000000000000009401 195.0
PJD3_k127_4811313_196 Thioredoxin K03671 - - 0.00000000000000000000000000000000000000000000000001859 183.0
PJD3_k127_4811313_197 - K07071 - - 0.0000000000000000000000000000000000000000000000001478 180.0
PJD3_k127_4811313_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1361.0
PJD3_k127_4811313_20 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 4.761e-252 781.0
PJD3_k127_4811313_200 CTP:tRNA cytidylyltransferase activity K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000003292 179.0
PJD3_k127_4811313_201 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000005816 173.0
PJD3_k127_4811313_205 Transcriptional regulator - - - 0.000000000000000000000000000000000000000002447 160.0
PJD3_k127_4811313_206 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000001127 169.0
PJD3_k127_4811313_207 cytochrome - - - 0.0000000000000000000000000000000000000000222 154.0
PJD3_k127_4811313_208 Response regulator, receiver K02482 - 2.7.13.3 0.00000000000000000000000000000000000000002599 155.0
PJD3_k127_4811313_21 Uncharacterized protein family (UPF0051) K09014 - - 1.383e-247 767.0
PJD3_k127_4811313_211 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000002518 151.0
PJD3_k127_4811313_212 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000001133 149.0
PJD3_k127_4811313_213 Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - 0.0000000000000000000000000000000000000178 146.0
PJD3_k127_4811313_215 OsmC-like protein - - - 0.00000000000000000000000000000000000004296 147.0
PJD3_k127_4811313_216 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000002175 141.0
PJD3_k127_4811313_217 PFAM DTW domain containing protein K05812 - - 0.00000000000000000000000000000000000302 145.0
PJD3_k127_4811313_219 Belongs to the UPF0109 family K06960 - - 0.00000000000000000000000000000000001579 136.0
PJD3_k127_4811313_22 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 4.021e-247 769.0
PJD3_k127_4811313_221 Bacterial protein of unknown function (DUF898) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000004456 146.0
PJD3_k127_4811313_222 TatD related DNase K03424 - - 0.000000000000000000000000000000006331 136.0
PJD3_k127_4811313_223 regulation of translation K05808 GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.00000000000000000000000000000001802 127.0
PJD3_k127_4811313_224 Domain of unknown function (DUF309) K09763 - - 0.000000000000000000000000000001288 126.0
PJD3_k127_4811313_225 (Hpt) domain - - - 0.000000000000000000000000000002219 122.0
PJD3_k127_4811313_226 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000438 123.0
PJD3_k127_4811313_227 ABC-type amino acid transport signal transduction systems, periplasmic component domain K02030 - - 0.000000000000000000000000000004901 128.0
PJD3_k127_4811313_228 transcriptional regulator K13643 - - 0.00000000000000000000000000003316 123.0
PJD3_k127_4811313_229 THIamine pyrophosphokinase K00949 - 2.7.6.2 0.00000000000000000000000000005262 123.0
PJD3_k127_4811313_23 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 2.145e-242 767.0
PJD3_k127_4811313_230 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000002543 109.0
PJD3_k127_4811313_233 Peptidase family M48 - - - 0.0000000000000000000002898 108.0
PJD3_k127_4811313_236 2 iron, 2 sulfur cluster binding K02192 - - 0.00000000000000000001208 93.0
PJD3_k127_4811313_237 helix_turn_helix, mercury resistance - - - 0.00000000000000000001361 96.0
PJD3_k127_4811313_24 - - - - 5.364e-235 734.0
PJD3_k127_4811313_241 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 GO:0003674,GO:0005215 - 0.000000000000006982 76.0
PJD3_k127_4811313_244 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.0000000054 63.0
PJD3_k127_4811313_246 - - - - 0.0000001658 62.0
PJD3_k127_4811313_247 - - - - 0.00001672 54.0
PJD3_k127_4811313_25 PFAM Aminotransferase class-III K01845 - 5.4.3.8 9.626e-231 718.0
PJD3_k127_4811313_27 Histidine kinase - - - 3.74e-222 699.0
PJD3_k127_4811313_28 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 4.764e-222 694.0
PJD3_k127_4811313_29 type 4 fimbrial biogenesis protein PilM K02461 - - 1.395e-215 680.0
PJD3_k127_4811313_3 Type II and III secretion system protein K02453 - - 0.0 1251.0
PJD3_k127_4811313_30 Type II secretion system K02455,K02653 - - 1.182e-213 668.0
PJD3_k127_4811313_31 ASPIC and UnbV - - - 1.455e-206 657.0
PJD3_k127_4811313_32 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 2.741e-206 647.0
PJD3_k127_4811313_33 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 5.496e-205 646.0
PJD3_k127_4811313_34 Peptidase family M28 K05994 - 3.4.11.10 1.357e-203 638.0
PJD3_k127_4811313_35 Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides K00088 - 1.1.1.205 1.891e-200 629.0
PJD3_k127_4811313_36 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 1.286e-199 630.0
PJD3_k127_4811313_37 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 6.546e-197 627.0
PJD3_k127_4811313_38 sodium-dependent phosphate transmembrane transporter activity K03324,K03466 - - 9.926e-195 622.0
PJD3_k127_4811313_39 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 608.0
PJD3_k127_4811313_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1189.0
PJD3_k127_4811313_40 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 593.0
PJD3_k127_4811313_41 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006587 594.0
PJD3_k127_4811313_42 Type II secretion system (T2SS), protein K K02460 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000716 594.0
PJD3_k127_4811313_43 Sodium/hydrogen exchanger family K11105 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006005 594.0
PJD3_k127_4811313_44 PFAM NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008811 580.0
PJD3_k127_4811313_46 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 568.0
PJD3_k127_4811313_47 Bacterial periplasmic substrate-binding proteins K09969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 568.0
PJD3_k127_4811313_48 Belongs to the heat shock protein 70 family K04046 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 572.0
PJD3_k127_4811313_49 PFAM metal-dependent phosphohydrolase, HD sub domain K01524,K07016 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000712 573.0
PJD3_k127_4811313_5 Catalyzes the ferrous insertion into protoporphyrin IX - - - 0.0 1170.0
PJD3_k127_4811313_50 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006586 618.0
PJD3_k127_4811313_51 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 549.0
PJD3_k127_4811313_52 RNA pseudouridylate synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 552.0
PJD3_k127_4811313_53 Domain of unknown function (DUF4105) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 558.0
PJD3_k127_4811313_54 PFAM Type II secretion system protein E K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 542.0
PJD3_k127_4811313_55 PFAM Alcohol dehydrogenase zinc-binding domain protein K19745 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 535.0
PJD3_k127_4811313_56 dipeptidyl-peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009921 542.0
PJD3_k127_4811313_57 Stage II sporulation D domain protein K06381 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008142 529.0
PJD3_k127_4811313_58 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 517.0
PJD3_k127_4811313_59 PQQ-like domain K17713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 512.0
PJD3_k127_4811313_6 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470,K02622 - 5.99.1.3 0.0 1169.0
PJD3_k127_4811313_60 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000821 512.0
PJD3_k127_4811313_61 Transcriptional regulator, LysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 499.0
PJD3_k127_4811313_62 PFAM S-adenosylmethionine decarboxylase K01611 - 4.1.1.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 497.0
PJD3_k127_4811313_63 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K02029,K10002 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 496.0
PJD3_k127_4811313_64 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008265 492.0
PJD3_k127_4811313_65 Hemerythrin HHE cation binding domain K03406,K07216 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 499.0
PJD3_k127_4811313_66 Binding-protein-dependent transport system inner membrane component K09970 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 492.0
PJD3_k127_4811313_67 PFAM metal-dependent phosphohydrolase, HD sub domain K01524,K07016 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 492.0
PJD3_k127_4811313_68 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008284 492.0
PJD3_k127_4811313_69 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009057 488.0
PJD3_k127_4811313_7 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.0 1146.0
PJD3_k127_4811313_70 Belongs to the 'phage' integrase family K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 484.0
PJD3_k127_4811313_71 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 481.0
PJD3_k127_4811313_72 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004375 464.0
PJD3_k127_4811313_73 Belongs to the GPAT DAPAT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 470.0
PJD3_k127_4811313_74 Aminotransferase class-V K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 467.0
PJD3_k127_4811313_75 Zinc carboxypeptidase K14054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005066 466.0
PJD3_k127_4811313_76 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 459.0
PJD3_k127_4811313_77 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 436.0
PJD3_k127_4811313_79 Uncharacterised ACR, YagE family COG1723 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 424.0
PJD3_k127_4811313_8 Bacterial regulatory protein, Fis family - - - 0.0 1084.0
PJD3_k127_4811313_80 lytic transglycosylase activity K08309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 429.0
PJD3_k127_4811313_81 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 422.0
PJD3_k127_4811313_82 Belongs to the peptidase M48B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 421.0
PJD3_k127_4811313_84 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 411.0
PJD3_k127_4811313_85 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 413.0
PJD3_k127_4811313_86 PFAM ABC transporter related K02028,K09972 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 406.0
PJD3_k127_4811313_87 PFAM MotA TolQ ExbB proton channel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 405.0
PJD3_k127_4811313_88 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 409.0
PJD3_k127_4811313_89 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 396.0
PJD3_k127_4811313_9 PFAM Type II secretion system protein E K02454 - - 0.0 1058.0
PJD3_k127_4811313_90 membrane-bound metal-dependent hydrolase K07038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 399.0
PJD3_k127_4811313_91 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 393.0
PJD3_k127_4811313_93 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 393.0
PJD3_k127_4811313_94 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 393.0
PJD3_k127_4811313_95 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 387.0
PJD3_k127_4811313_96 Rhomboid-type serine protease that catalyzes intramembrane proteolysis K02441 GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019219,GO:0019222,GO:0019538,GO:0031224,GO:0031226,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080090,GO:0097159,GO:0140096,GO:1901363,GO:1901564,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009385 387.0
PJD3_k127_4811313_97 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 383.0
PJD3_k127_4811313_98 oxidoreductase activity K12515 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 383.0
PJD3_k127_4811313_99 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 380.0
PJD3_k127_4836077_0 FtsX-like permease family K02004 - - 2.596e-286 901.0
PJD3_k127_4836077_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 8.309e-274 860.0
PJD3_k127_4836077_11 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005236 368.0
PJD3_k127_4836077_12 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007634 252.0
PJD3_k127_4836077_13 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000000000000000000000001656 241.0
PJD3_k127_4836077_14 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000000000000000000000000000000001522 238.0
PJD3_k127_4836077_15 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000003223 220.0
PJD3_k127_4836077_17 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000005544 211.0
PJD3_k127_4836077_18 - - - - 0.00000000000000000000000000000000000000000000000000003379 195.0
PJD3_k127_4836077_19 Putative member of DMT superfamily (DUF486) K09922 - - 0.0000000000000000000000000000000000000000000000000005252 186.0
PJD3_k127_4836077_2 Lytic transglycosylase catalytic K08307 - - 4.938e-264 818.0
PJD3_k127_4836077_20 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000002885 158.0
PJD3_k127_4836077_21 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000000000001125 155.0
PJD3_k127_4836077_22 Putative modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000006354 151.0
PJD3_k127_4836077_23 DNA-binding protein VF530 - GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363 - 0.000000000000000000000001417 104.0
PJD3_k127_4836077_24 Metal-sensitive transcriptional repressor K21600 - - 0.00000000000000000000002742 102.0
PJD3_k127_4836077_26 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation - - - 0.000000000000001296 87.0
PJD3_k127_4836077_27 mercury ion transmembrane transporter activity K07213,K08364 - - 0.00000000002571 67.0
PJD3_k127_4836077_3 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 577.0
PJD3_k127_4836077_4 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 574.0
PJD3_k127_4836077_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006034 484.0
PJD3_k127_4836077_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 471.0
PJD3_k127_4836077_8 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007369 428.0
PJD3_k127_4863883_0 Ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 1.857e-287 893.0
PJD3_k127_4863883_1 PFAM Cytochrome c oxidase, subunit I K04561 - 1.7.2.5 4.571e-213 668.0
PJD3_k127_4863883_10 Radical_SAM C-terminal domain K07139 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464,GO:0048037,GO:0051536,GO:0051539,GO:0051540 - 0.000000000000000000000000000000000000000000000000000000000000000000000000004751 262.0
PJD3_k127_4863883_11 - - - - 0.00000000000000000000000000000000000000000000000000000001402 212.0
PJD3_k127_4863883_12 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000000000000004786 212.0
PJD3_k127_4863883_13 cytochrome c K02305 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000001833 171.0
PJD3_k127_4863883_14 Nitric oxide reductase K02164 - - 0.00000000000000000000000000000000000000000156 162.0
PJD3_k127_4863883_15 4Fe-4S single cluster domain K04068 - 1.97.1.4 0.0000000000000000000000000000000000000002305 155.0
PJD3_k127_4863883_16 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000001395 158.0
PJD3_k127_4863883_17 synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000131 146.0
PJD3_k127_4863883_18 NnrS protein K07234 - - 0.0000000000000000000000000000006042 136.0
PJD3_k127_4863883_19 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000008366 111.0
PJD3_k127_4863883_2 Cytosol aminopeptidase family, catalytic domain K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 578.0
PJD3_k127_4863883_20 response regulator - - - 0.000000000000000000005338 98.0
PJD3_k127_4863883_21 YceI-like domain - - - 0.0000000000000001077 86.0
PJD3_k127_4863883_22 Concanavalin A-like lectin/glucanases superfamily - - - 0.000000000000001407 85.0
PJD3_k127_4863883_23 Belongs to the heme-copper respiratory oxidase family - - - 0.000000000001107 80.0
PJD3_k127_4863883_24 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000001953 73.0
PJD3_k127_4863883_25 XRE family transcriptional regulator - - - 0.0000001884 58.0
PJD3_k127_4863883_26 NnrS protein K07234 - - 0.0000004417 62.0
PJD3_k127_4863883_3 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 424.0
PJD3_k127_4863883_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000686 414.0
PJD3_k127_4863883_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 351.0
PJD3_k127_4863883_6 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 310.0
PJD3_k127_4863883_7 Glycosyl transferase family, helical bundle domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 302.0
PJD3_k127_4863883_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 301.0
PJD3_k127_4863883_9 NorD protein K02448 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003013 287.0
PJD3_k127_4880472_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1303.0
PJD3_k127_4880472_1 PrkA AAA domain protein - - - 0.0 1221.0
PJD3_k127_4880472_10 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 477.0
PJD3_k127_4880472_11 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 439.0
PJD3_k127_4880472_12 Acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 417.0
PJD3_k127_4880472_13 YicC domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 402.0
PJD3_k127_4880472_14 Nitrogen assimilation regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 398.0
PJD3_k127_4880472_15 GH3 auxin-responsive promoter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 359.0
PJD3_k127_4880472_16 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052 345.0
PJD3_k127_4880472_19 hydrolases of the HAD superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 306.0
PJD3_k127_4880472_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 9.894e-250 773.0
PJD3_k127_4880472_20 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 297.0
PJD3_k127_4880472_21 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006165 284.0
PJD3_k127_4880472_23 Quinol cytochrome c oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000163 267.0
PJD3_k127_4880472_27 chelatase, subunit chli K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000003447 235.0
PJD3_k127_4880472_28 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000000000000000000000000000000000000006741 242.0
PJD3_k127_4880472_29 - - - - 0.000000000000000000000000000000000000000000000000000000000009122 216.0
PJD3_k127_4880472_3 Oxidoreductase K00184 - - 6.511e-239 770.0
PJD3_k127_4880472_30 PFAM Class III cytochrome C family - - - 0.000000000000000000000000000000000000000000000000000000002051 205.0
PJD3_k127_4880472_31 Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000002813 205.0
PJD3_k127_4880472_32 Glutamyl-tRNAGlu reductase, N-terminal domain K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000154 203.0
PJD3_k127_4880472_33 nucleotide catabolic process - - - 0.000000000000000000000000000000000000000000000009133 184.0
PJD3_k127_4880472_35 PFAM Amidohydrolase 2 K01686 - 4.2.1.8 0.000000000000000000000000000000000000000000001244 177.0
PJD3_k127_4880472_36 COG1648 Siroheme synthase (precorrin-2 oxidase ferrochelatase domain) K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000001808 157.0
PJD3_k127_4880472_37 Rhodanese Homology Domain K01069 - 3.1.2.6 0.000000000000000000000000000000000000006402 148.0
PJD3_k127_4880472_38 COG3000 Sterol desaturase - - - 0.00000000000000000000000000000000000001426 153.0
PJD3_k127_4880472_4 ASPIC and UnbV - - - 1.663e-237 765.0
PJD3_k127_4880472_40 cytochrome C - - - 0.00000000000000000000000000000000316 134.0
PJD3_k127_4880472_41 Quinol cytochrome c oxidoreductase membrane protein - - - 0.000000000000000000000000000000006906 133.0
PJD3_k127_4880472_43 PFAM Bacterial transferase hexapeptide (three repeats) - - - 0.00000000000000000000000000004519 124.0
PJD3_k127_4880472_44 DoxX - - - 0.00000000000000000001057 97.0
PJD3_k127_4880472_45 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 - 1.4.1.4 0.00000000000000005428 93.0
PJD3_k127_4880472_46 - - - - 0.000000000005955 77.0
PJD3_k127_4880472_48 COGs COG1033 exporter of the RND superfamily protein K07003 - - 0.000002698 61.0
PJD3_k127_4880472_5 Polysulphide reductase, NrfD K00185 - - 8.493e-217 680.0
PJD3_k127_4880472_6 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 8.34e-213 663.0
PJD3_k127_4880472_7 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 1.356e-209 655.0
PJD3_k127_4880472_8 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005696 530.0
PJD3_k127_4880472_9 NAD dependent epimerase/dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 526.0
PJD3_k127_4903799_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1172.0
PJD3_k127_4903799_10 Peptidase U62 modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006642 466.0
PJD3_k127_4903799_11 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005007 452.0
PJD3_k127_4903799_12 2-nitropropane dioxygenase K02371 - 1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009351 438.0
PJD3_k127_4903799_13 Belongs to the peptidase S1B family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 434.0
PJD3_k127_4903799_14 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 434.0
PJD3_k127_4903799_16 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 293.0
PJD3_k127_4903799_17 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00316 - 1.5.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001795 276.0
PJD3_k127_4903799_18 DTW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001032 267.0
PJD3_k127_4903799_19 PFAM FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002961 277.0
PJD3_k127_4903799_2 RNA binding S1 domain protein K06959 - - 0.0 1106.0
PJD3_k127_4903799_20 Belongs to the peptidase S1B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001221 257.0
PJD3_k127_4903799_21 S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001206 253.0
PJD3_k127_4903799_22 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941,K18974 - 2.5.1.15,2.7.6.3 0.000000000000000000000000000000000000000000000000000000001613 211.0
PJD3_k127_4903799_23 MepB protein - - - 0.00000000000000000000000000000000000000000006689 164.0
PJD3_k127_4903799_24 Protein of unknown function (DUF1304) K08987 - - 0.0000000000000000000000000000000000000001653 153.0
PJD3_k127_4903799_25 lactoylglutathione lyase activity K00077,K06162 - 1.1.1.169,3.6.1.63 0.0000000000000000000000000000000002208 136.0
PJD3_k127_4903799_26 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000009087 134.0
PJD3_k127_4903799_27 Belongs to the peptidase S24 family K03503 - - 0.0000000000000000000000000000000009626 135.0
PJD3_k127_4903799_3 Acyl-CoA dehydrogenase, C-terminal domain - - - 4.5e-314 968.0
PJD3_k127_4903799_4 PFAM Na Pi-cotransporter K03324 - - 1.867e-263 821.0
PJD3_k127_4903799_5 Peptidase U62 modulator of DNA gyrase K03568 - - 4.69e-230 719.0
PJD3_k127_4903799_6 prolyl oligopeptidase K01322 - 3.4.21.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 582.0
PJD3_k127_4903799_7 PFAM metal-dependent phosphohydrolase, HD sub domain K01524,K07016 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 511.0
PJD3_k127_4903799_8 PFAM UMUC domain protein DNA-repair protein K02346,K03502 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 494.0
PJD3_k127_4903799_9 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004708 509.0
PJD3_k127_5112642_0 Nitrite reductase K15864 - 1.7.2.1,1.7.99.1 1.33e-247 776.0
PJD3_k127_5112642_1 PFAM Pyridoxal-dependent decarboxylase K01580 - 4.1.1.15 2.037e-223 706.0
PJD3_k127_5112642_10 Cytochrome c7 and related cytochrome c - - - 0.0000000000002331 74.0
PJD3_k127_5112642_11 Cytochrome c K08738 - - 0.000000212 57.0
PJD3_k127_5112642_2 Cytochrome D1 heme domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 551.0
PJD3_k127_5112642_3 biosynthesis protein E - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007884 407.0
PJD3_k127_5112642_4 Cytochrome D1 heme domain K19345 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 347.0
PJD3_k127_5112642_5 Catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1 K02303 - 2.1.1.107 0.000000000000000000000000000000000000000000000000000000000000000000000000006108 260.0
PJD3_k127_5112642_6 transcriptional regulator AsnC family - - - 0.00000000000000000000000000000000000000000001029 167.0
PJD3_k127_5112642_7 heme biosynthesis protein - - - 0.00000000000000000000000000000000318 134.0
PJD3_k127_5112642_8 transcriptional - - - 0.00000000000000000000000000000003028 130.0
PJD3_k127_5112642_9 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000001787 123.0
PJD3_k127_5451390_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1535.0
PJD3_k127_5451390_1 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0 1255.0
PJD3_k127_5451390_10 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004793 469.0
PJD3_k127_5451390_11 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 467.0
PJD3_k127_5451390_12 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 433.0
PJD3_k127_5451390_13 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 381.0
PJD3_k127_5451390_14 Hsp33 protein K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 383.0
PJD3_k127_5451390_15 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 373.0
PJD3_k127_5451390_17 Flavin reductase like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 357.0
PJD3_k127_5451390_19 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 312.0
PJD3_k127_5451390_2 Belongs to the helicase family. UvrD subfamily K16898 - 3.6.4.12 0.0 1057.0
PJD3_k127_5451390_20 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007903 295.0
PJD3_k127_5451390_21 Etoposide-induced protein 2.4 (EI24) K06203 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009827 266.0
PJD3_k127_5451390_24 Phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000008269 234.0
PJD3_k127_5451390_25 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000000000001324 208.0
PJD3_k127_5451390_26 Domain of unknown function (DUF309) K09763 - - 0.0000000000000000000000000000000000000000000000000000000005279 203.0
PJD3_k127_5451390_27 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000001282 202.0
PJD3_k127_5451390_28 phosphatidylethanolamine metabolic process K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000008536 204.0
PJD3_k127_5451390_29 tRNA threonylcarbamoyladenosine modification K01409,K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0030312,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0071944,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.000000000000000000000000000000000000000000000000000001231 198.0
PJD3_k127_5451390_3 PFAM cell divisionFtsK SpoIIIE K03466 - - 1.214e-272 861.0
PJD3_k127_5451390_4 SMART PDZ DHR GLGF domain protein K11749 - - 1.48e-230 723.0
PJD3_k127_5451390_5 Homogentisate 12-dioxygenase K00451 - 1.13.11.5 1.087e-223 695.0
PJD3_k127_5451390_6 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 1.754e-221 692.0
PJD3_k127_5451390_7 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 1.172e-214 669.0
PJD3_k127_5451390_8 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 553.0
PJD3_k127_5451390_9 Belongs to the helicase family. UvrD subfamily K03657,K07465,K10742 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004671 569.0
PJD3_k127_5452854_0 Phosphoadenosine phosphosulfate reductase family K19170 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 599.0
PJD3_k127_5452854_1 endonuclease III K07457 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 407.0
PJD3_k127_5452854_2 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001024 302.0
PJD3_k127_5452854_3 (ABC) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000001267 253.0
PJD3_k127_5452854_4 Uncharacterized conserved protein (DUF2196) - - - 0.0000000000000000000000000000007419 121.0
PJD3_k127_5452854_5 PFAM HEPN domain protein - - - 0.0000000000008865 73.0
PJD3_k127_5452854_6 DNA polymerase beta domain protein region - - - 0.00008977 49.0
PJD3_k127_568894_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1618.0
PJD3_k127_568894_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 3.01e-287 888.0
PJD3_k127_568894_11 ABC 3 transport family K02075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 356.0
PJD3_k127_568894_12 Carbamoyltransferase C-terminus K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 342.0
PJD3_k127_568894_13 sequence-specific DNA binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 321.0
PJD3_k127_568894_14 phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 325.0
PJD3_k127_568894_15 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 309.0
PJD3_k127_568894_17 Belongs to the bacterial solute-binding protein 9 family K02077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005081 276.0
PJD3_k127_568894_18 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008502 275.0
PJD3_k127_568894_19 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.00000000000000000000000000000000000000000000000000000000000000000000001569 249.0
PJD3_k127_568894_2 GMC oxidoreductase K03333 - 1.1.3.6 2.135e-270 839.0
PJD3_k127_568894_20 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000006951 242.0
PJD3_k127_568894_22 establishment of competence for transformation K02238 - - 0.0000000000000000000000000000000000000000000000000000000007346 213.0
PJD3_k127_568894_23 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000001171 213.0
PJD3_k127_568894_24 Iron-regulated membrane protein K09939 - - 0.00000000000000000000000000000000000000000000000003405 183.0
PJD3_k127_568894_25 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000008691 194.0
PJD3_k127_568894_26 Peptidyl-prolyl cis-trans K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000001855 175.0
PJD3_k127_568894_27 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000003215 188.0
PJD3_k127_568894_28 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000001248 180.0
PJD3_k127_568894_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 574.0
PJD3_k127_568894_31 topology modulation protein - - - 0.00000000000000000000000000000000001466 141.0
PJD3_k127_568894_33 Acyltransferase - - - 0.000000000000000000000000000000001654 143.0
PJD3_k127_568894_34 SnoaL-like domain K06893 - - 0.000000000000000000000000000005073 124.0
PJD3_k127_568894_36 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03673 - - 0.00000000000000000001367 104.0
PJD3_k127_568894_37 acetyltransferase - - - 0.00005727 54.0
PJD3_k127_568894_4 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase K04034 - 1.21.98.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 570.0
PJD3_k127_568894_5 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 505.0
PJD3_k127_568894_6 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 464.0
PJD3_k127_568894_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556 413.0
PJD3_k127_568894_8 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006851 402.0
PJD3_k127_568894_9 A G-specific adenine glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 401.0
PJD3_k127_606689_0 Fibrinogen-related domains (FReDs) - - - 0.0 1662.0
PJD3_k127_606689_1 Peptidase M1 membrane alanine aminopeptidase K01256,K08776 - 3.4.11.2 0.0 1249.0
PJD3_k127_606689_10 acetyltransferase - - - 2.139e-199 625.0
PJD3_k127_606689_11 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 607.0
PJD3_k127_606689_12 Peptidase M16 inactive domain K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 557.0
PJD3_k127_606689_13 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 497.0
PJD3_k127_606689_14 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006508 505.0
PJD3_k127_606689_15 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 488.0
PJD3_k127_606689_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 462.0
PJD3_k127_606689_17 FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008006 442.0
PJD3_k127_606689_18 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 441.0
PJD3_k127_606689_19 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 417.0
PJD3_k127_606689_2 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.0 1234.0
PJD3_k127_606689_20 Phospholipase A1 K01058 - 3.1.1.32,3.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 407.0
PJD3_k127_606689_21 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007212 378.0
PJD3_k127_606689_22 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006983 363.0
PJD3_k127_606689_23 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 351.0
PJD3_k127_606689_24 phosphatidate phosphatase activity K09474,K19302 - 3.1.3.2,3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 344.0
PJD3_k127_606689_27 Eukaryotic integral membrane protein (DUF1751) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 317.0
PJD3_k127_606689_28 HAD superfamily, subfamily IIIB (Acid phosphatase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 306.0
PJD3_k127_606689_3 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0 1012.0
PJD3_k127_606689_30 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.0000000000000000000000000000000000000000000000000000000000000000003884 231.0
PJD3_k127_606689_31 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000001955 229.0
PJD3_k127_606689_32 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002053 235.0
PJD3_k127_606689_33 Chaperone of endosialidase K21449 - - 0.0000000000000000000000000000000000000000000000000000000000000001271 237.0
PJD3_k127_606689_36 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000001368 135.0
PJD3_k127_606689_37 - - - - 0.0000000000000000000000000000000003577 139.0
PJD3_k127_606689_38 AAA domain K00845 - 2.7.1.2 0.00000000000000000000007297 105.0
PJD3_k127_606689_40 PKD domain - - - 0.0000003589 57.0
PJD3_k127_606689_5 Putative Na+/H+ antiporter - - - 1.162e-240 748.0
PJD3_k127_606689_6 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 2.14e-240 746.0
PJD3_k127_606689_7 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 8.582e-220 685.0
PJD3_k127_606689_8 Calcineurin-like phosphoesterase - - - 9.119e-220 683.0
PJD3_k127_606689_9 PFAM ketose-bisphosphate aldolase, class-II K01624 - 4.1.2.13 6.605e-204 636.0
PJD3_k127_6067132_0 HemY domain protein K20276 - - 0.0 4100.0
PJD3_k127_6067132_1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179,K04090 - 1.2.7.8 0.0 1677.0
PJD3_k127_6067132_10 PFAM ABC transporter related K15738 - - 3.315e-299 930.0
PJD3_k127_6067132_100 enoyl-CoA hydratase isomerase family protein K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 340.0
PJD3_k127_6067132_101 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 338.0
PJD3_k127_6067132_102 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 329.0
PJD3_k127_6067132_105 FAD binding domain K05797 - 1.17.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005412 337.0
PJD3_k127_6067132_106 protein import - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007615 322.0
PJD3_k127_6067132_107 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 333.0
PJD3_k127_6067132_108 alpha/beta hydrolase fold K01563,K22318 - 3.8.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 318.0
PJD3_k127_6067132_109 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 309.0
PJD3_k127_6067132_11 TIGRFAM acetoacetyl-CoA synthase K01907 - 6.2.1.16 4.108e-299 928.0
PJD3_k127_6067132_110 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 316.0
PJD3_k127_6067132_111 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 318.0
PJD3_k127_6067132_112 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 308.0
PJD3_k127_6067132_113 PFAM CheC domain protein K03409 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008934 303.0
PJD3_k127_6067132_114 Belongs to the RimK family K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004415 308.0
PJD3_k127_6067132_116 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 299.0
PJD3_k127_6067132_117 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 301.0
PJD3_k127_6067132_118 PFAM Transcription factor CarD K07736 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 282.0
PJD3_k127_6067132_119 Belongs to the arginase family K01479 - 3.5.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000149 289.0
PJD3_k127_6067132_12 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 3.145e-291 910.0
PJD3_k127_6067132_120 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 281.0
PJD3_k127_6067132_121 rRNA processing K06968 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.186 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003948 287.0
PJD3_k127_6067132_122 MotA/TolQ/ExbB proton channel family K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000126 282.0
PJD3_k127_6067132_123 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008124 279.0
PJD3_k127_6067132_124 chorismate binding enzyme K02552 - 5.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000373 284.0
PJD3_k127_6067132_125 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000431 259.0
PJD3_k127_6067132_126 3-hydroxyacyl-CoA dehydrogenase K00074,K17735 - 1.1.1.108,1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000167 256.0
PJD3_k127_6067132_128 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000000005561 250.0
PJD3_k127_6067132_129 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.000000000000000000000000000000000000000000000000000000000000000000000000649 251.0
PJD3_k127_6067132_13 tRNA synthetases class I (K) K04566 - 6.1.1.6 1.065e-287 892.0
PJD3_k127_6067132_130 Belongs to the peptidase S1B family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000124 255.0
PJD3_k127_6067132_131 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002536 245.0
PJD3_k127_6067132_134 regulation of RNA biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006064 249.0
PJD3_k127_6067132_135 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000008407 247.0
PJD3_k127_6067132_136 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001653 248.0
PJD3_k127_6067132_137 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000000000363 241.0
PJD3_k127_6067132_138 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000002512 242.0
PJD3_k127_6067132_139 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000000000000000000000000000000000000000000000004132 256.0
PJD3_k127_6067132_14 FAD dependent oxidoreductase K07137 - - 6.714e-282 871.0
PJD3_k127_6067132_140 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.0000000000000000000000000000000000000000000000000000000000000000002738 233.0
PJD3_k127_6067132_141 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000001309 227.0
PJD3_k127_6067132_142 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000000000000000000000000005622 218.0
PJD3_k127_6067132_143 Protein of unknown function (DUF2452) - - - 0.000000000000000000000000000000000000000000000000000000000001073 213.0
PJD3_k127_6067132_144 protein maturation K13628,K15724 - - 0.00000000000000000000000000000000000000000000000000000000003258 207.0
PJD3_k127_6067132_145 Belongs to the P-Pant transferase superfamily K02362,K06133 - 6.3.2.14 0.0000000000000000000000000000000000000000000000000000000001212 208.0
PJD3_k127_6067132_146 Protein of unknown function (DUF523) - - - 0.0000000000000000000000000000000000000000000000000000000008022 203.0
PJD3_k127_6067132_147 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000000000001253 203.0
PJD3_k127_6067132_148 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000006645 212.0
PJD3_k127_6067132_149 EthD domain - - - 0.000000000000000000000000000000000000000000000000000000008057 198.0
PJD3_k127_6067132_15 Peptidase, M61 - - - 2.945e-270 842.0
PJD3_k127_6067132_150 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.00000000000000000000000000000000000000000000000000000001693 205.0
PJD3_k127_6067132_151 phosphorelay signal transduction system K07720 - - 0.0000000000000000000000000000000000000000000000000000003825 195.0
PJD3_k127_6067132_155 IMP dehydrogenase activity K04767 - - 0.00000000000000000000000000000000000000000000000000000762 192.0
PJD3_k127_6067132_156 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000000000000004315 189.0
PJD3_k127_6067132_16 Flavin containing amine oxidoreductase - - - 9.082e-267 826.0
PJD3_k127_6067132_167 IMP dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000001756 171.0
PJD3_k127_6067132_17 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 7.817e-259 808.0
PJD3_k127_6067132_170 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356,K03503 - 3.4.21.88 0.0000000000000000000000000000000000000000001125 167.0
PJD3_k127_6067132_172 menaquinone biosynthetic process K02549 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.2.1.113 0.00000000000000000000000000000000000000005337 165.0
PJD3_k127_6067132_173 Protein conserved in bacteria K11022 - - 0.000000000000000000000000000000000000001804 149.0
PJD3_k127_6067132_174 Domain of unknown function (DUF4423) - - - 0.000000000000000000000000000000000000004097 156.0
PJD3_k127_6067132_176 Phosphopantetheine attachment site - - - 0.0000000000000000000000000000000000000556 143.0
PJD3_k127_6067132_177 YceI-like domain - - - 0.0000000000000000000000000000000000001873 147.0
PJD3_k127_6067132_18 belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 2.769e-255 793.0
PJD3_k127_6067132_180 CoA carboxylase activity K01965,K02160 - 6.4.1.3 0.000000000000000000000000000000002647 134.0
PJD3_k127_6067132_182 Transcriptional regulator K16137 - - 0.0000000000000000000000000000005983 129.0
PJD3_k127_6067132_183 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000002816 130.0
PJD3_k127_6067132_186 CBS domain K04767,K07168,K07182 - - 0.000000000000000000000000001917 119.0
PJD3_k127_6067132_189 phosphorelay signal transduction system - - - 0.0000000000000000000000001132 110.0
PJD3_k127_6067132_19 - - - - 2.831e-246 775.0
PJD3_k127_6067132_194 guanyl-nucleotide exchange factor activity - - - 0.00000000000000004426 98.0
PJD3_k127_6067132_195 Bacterial extracellular solute-binding proteins, family 3 - - - 0.0000000000000000542 89.0
PJD3_k127_6067132_197 PhoQ Sensor - - - 0.00000000000001312 87.0
PJD3_k127_6067132_198 Bacterial regulatory proteins, tetR family K16137 - - 0.00000000000006296 79.0
PJD3_k127_6067132_20 ResB-like family - - - 5.508e-243 761.0
PJD3_k127_6067132_203 - - - - 0.000000006051 66.0
PJD3_k127_6067132_204 Bacterial regulatory proteins, tetR family K09017 - - 0.00000005386 62.0
PJD3_k127_6067132_207 protein conserved in bacteria - - - 0.000008384 54.0
PJD3_k127_6067132_21 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 2.813e-240 743.0
PJD3_k127_6067132_22 PFAM AMP-dependent synthetase and ligase K22319 - 6.1.3.1 8.048e-239 748.0
PJD3_k127_6067132_24 Phosphatase K07093 - - 3.936e-233 738.0
PJD3_k127_6067132_25 Flp pilus assembly protein, ATPase CpaF K02283 - - 5.183e-232 719.0
PJD3_k127_6067132_26 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 9.358e-232 722.0
PJD3_k127_6067132_27 Cytochrome C assembly protein - - - 2.329e-230 722.0
PJD3_k127_6067132_28 carboxylase K01965,K01968,K13777 - 6.4.1.3,6.4.1.4,6.4.1.5 4.44e-230 720.0
PJD3_k127_6067132_29 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 2.356e-229 715.0
PJD3_k127_6067132_3 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1205.0
PJD3_k127_6067132_30 - - - - 4.298e-228 741.0
PJD3_k127_6067132_32 PFAM FAD dependent oxidoreductase K09835,K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31,5.2.1.13 5.95e-222 695.0
PJD3_k127_6067132_33 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 8.929e-219 682.0
PJD3_k127_6067132_35 Belongs to the peptidase M24B family K01262 - 3.4.11.9 4.511e-217 681.0
PJD3_k127_6067132_36 helicase superfamily c-terminal domain - - - 7.629e-212 666.0
PJD3_k127_6067132_38 dioxygenase K00457 - 1.13.11.27 5.788e-202 631.0
PJD3_k127_6067132_39 Belongs to the thiolase family K00626 - 2.3.1.9 4.07e-200 629.0
PJD3_k127_6067132_4 - - - - 0.0 1153.0
PJD3_k127_6067132_40 nuclear chromosome segregation - - - 8.817e-195 652.0
PJD3_k127_6067132_42 Zn_pept K05996 - 3.4.17.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007085 608.0
PJD3_k127_6067132_43 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 599.0
PJD3_k127_6067132_44 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 601.0
PJD3_k127_6067132_45 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007368 586.0
PJD3_k127_6067132_46 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 579.0
PJD3_k127_6067132_47 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007251 567.0
PJD3_k127_6067132_49 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 576.0
PJD3_k127_6067132_5 PFAM UvrD REP helicase K03656,K03657 - 3.6.4.12 0.0 1123.0
PJD3_k127_6067132_51 hydro-lyase, Fe-S type, tartrate fumarate subfamily, alpha subunit K01677 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 554.0
PJD3_k127_6067132_52 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000599 553.0
PJD3_k127_6067132_54 Esterase-like activity of phytase K03929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 531.0
PJD3_k127_6067132_55 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005558 532.0
PJD3_k127_6067132_56 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K22317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 520.0
PJD3_k127_6067132_57 Belongs to the CinA family K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 515.0
PJD3_k127_6067132_58 AMP-binding enzyme K01911 - 6.2.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006972 516.0
PJD3_k127_6067132_59 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008428 500.0
PJD3_k127_6067132_6 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1050.0
PJD3_k127_6067132_61 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 488.0
PJD3_k127_6067132_62 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009126 490.0
PJD3_k127_6067132_63 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 490.0
PJD3_k127_6067132_64 Histidine kinase K07717,K15011 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 490.0
PJD3_k127_6067132_65 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 481.0
PJD3_k127_6067132_66 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 477.0
PJD3_k127_6067132_67 Belongs to the peptidase M48B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004293 479.0
PJD3_k127_6067132_68 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 479.0
PJD3_k127_6067132_69 PFAM aminotransferase class I and II K14267,K14287 - 2.6.1.17,2.6.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 469.0
PJD3_k127_6067132_7 Glutamine synthetase, catalytic region K01915 - 6.3.1.2 1.709e-308 960.0
PJD3_k127_6067132_70 fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000615 466.0
PJD3_k127_6067132_71 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 465.0
PJD3_k127_6067132_72 chromosome segregation K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 462.0
PJD3_k127_6067132_74 DNA-binding transcription factor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 444.0
PJD3_k127_6067132_75 Belongs to the FPP GGPP synthase family K00805,K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.30,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005752 442.0
PJD3_k127_6067132_76 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 420.0
PJD3_k127_6067132_77 - K00241 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 417.0
PJD3_k127_6067132_78 SprT-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007158 424.0
PJD3_k127_6067132_79 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008854 417.0
PJD3_k127_6067132_8 carboxylase K01969,K13778 - 6.4.1.4,6.4.1.5 1.785e-307 948.0
PJD3_k127_6067132_80 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 413.0
PJD3_k127_6067132_81 3-Beta hydroxysteroid dehydrogenase isomerase K21271,K22320 - 1.1.1.394,1.1.1.412 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 415.0
PJD3_k127_6067132_82 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 402.0
PJD3_k127_6067132_85 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004746 398.0
PJD3_k127_6067132_86 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 396.0
PJD3_k127_6067132_87 Alpha/beta hydrolase family K01048 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007456 398.0
PJD3_k127_6067132_88 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074,K15016 - 1.1.1.157,1.1.1.35,4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 396.0
PJD3_k127_6067132_89 Enoyl-CoA hydratase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 394.0
PJD3_k127_6067132_9 Endonuclease/Exonuclease/phosphatase family K07004 - - 5.516e-306 959.0
PJD3_k127_6067132_90 Histidine kinase K07678 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 423.0
PJD3_k127_6067132_91 Trypsin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008583 383.0
PJD3_k127_6067132_93 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008888 377.0
PJD3_k127_6067132_94 TIGRFAM hydro-lyase, Fe-S type, tartrate fumarate subfamily, beta subunit K01676,K01678 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 361.0
PJD3_k127_6067132_95 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 364.0
PJD3_k127_6067132_96 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007016 357.0
PJD3_k127_6067132_97 PFAM Cyclic nucleotide-binding K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 344.0
PJD3_k127_6067132_98 Domain of unknown function (DUF4360) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009648 343.0
PJD3_k127_6067132_99 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005192 347.0
PJD3_k127_61037_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1249.0
PJD3_k127_61037_10 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 6.406e-196 617.0
PJD3_k127_61037_11 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 541.0
PJD3_k127_61037_12 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 529.0
PJD3_k127_61037_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 509.0
PJD3_k127_61037_14 NLP P60 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 464.0
PJD3_k127_61037_15 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005281 422.0
PJD3_k127_61037_17 PFAM metal-dependent phosphohydrolase, HD sub domain K01524,K07016 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 415.0
PJD3_k127_61037_18 PFAM chemotaxis sensory transducer K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 423.0
PJD3_k127_61037_19 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007681 407.0
PJD3_k127_61037_2 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0 1139.0
PJD3_k127_61037_20 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 398.0
PJD3_k127_61037_21 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386,K20011 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 373.0
PJD3_k127_61037_22 Putative aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 370.0
PJD3_k127_61037_24 Bacterial extracellular solute-binding proteins, family 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 329.0
PJD3_k127_61037_25 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 292.0
PJD3_k127_61037_26 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001246 277.0
PJD3_k127_61037_27 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006624 274.0
PJD3_k127_61037_3 Methyl-accepting chemotaxis protein K03406,K05875 - - 0.0 1013.0
PJD3_k127_61037_31 Phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001312 254.0
PJD3_k127_61037_33 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000009689 240.0
PJD3_k127_61037_34 Methyltransferase K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000000000000000001088 218.0
PJD3_k127_61037_37 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000000000000000000000000000043 206.0
PJD3_k127_61037_38 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000000000000002556 185.0
PJD3_k127_61037_39 amino acid transport K02030 - - 0.00000000000000000000000000000000000000007377 160.0
PJD3_k127_61037_4 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 3.168e-280 865.0
PJD3_k127_61037_41 PFAM FxsA cytoplasmic membrane protein K07113 - - 0.00000000000000000000000000000000001674 140.0
PJD3_k127_61037_42 Glutathione S-transferase, N-terminal domain - - - 0.0000000000000000000000000000000004779 138.0
PJD3_k127_61037_45 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.000000000000000000000000000006822 128.0
PJD3_k127_61037_46 Bacterial regulatory protein, Fis family K13599 - - 0.00000000000000000007288 95.0
PJD3_k127_61037_47 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000001598 100.0
PJD3_k127_61037_49 DNA-binding transcription factor activity K21886,K21903 - - 0.0000000000001261 74.0
PJD3_k127_61037_5 SMART Nucleotide binding protein, PINc K07175 - - 9.3e-258 797.0
PJD3_k127_61037_50 Histidine kinase A domain protein - - - 0.0000000001049 74.0
PJD3_k127_61037_51 SWI complex, BAF60b domains - - - 0.0000000001445 65.0
PJD3_k127_61037_6 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 2.509e-252 781.0
PJD3_k127_61037_7 Haem-binding uptake, Tiki superfamily, ChaN - - - 4.395e-237 743.0
PJD3_k127_61037_8 Protein of unknown function (DUF3373) - - - 5.711e-219 687.0
PJD3_k127_61037_9 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 2.131e-213 668.0
PJD3_k127_61898_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1450.0
PJD3_k127_61898_1 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 3e-323 997.0
PJD3_k127_61898_10 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.0000000000000000000000000000000000000000000000000000000000000002752 222.0
PJD3_k127_61898_11 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000003586 189.0
PJD3_k127_61898_12 Pfam Response regulator receiver - - - 0.00000000000000000000000000000000000000000000005899 184.0
PJD3_k127_61898_13 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.000000000000000000000000000000000000000005907 164.0
PJD3_k127_61898_15 TIGRFAM geranylgeranyl reductase K21401 - 1.3.99.38 0.00000000000000000000000000000002533 140.0
PJD3_k127_61898_17 ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000002852 132.0
PJD3_k127_61898_19 Transcriptional regulatory protein, C terminal - - - 0.00007738 50.0
PJD3_k127_61898_2 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 9.065e-317 982.0
PJD3_k127_61898_3 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01464,K01465 - 3.5.2.2,3.5.2.3 2.251e-214 672.0
PJD3_k127_61898_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 4.152e-212 664.0
PJD3_k127_61898_5 chalcone and stilbene synthase domain protein - - - 4.012e-201 629.0
PJD3_k127_61898_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 6.554e-194 614.0
PJD3_k127_61898_7 growth of symbiont in host cell K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 586.0
PJD3_k127_61898_8 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 556.0
PJD3_k127_61898_9 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002186 267.0
PJD3_k127_6319775_0 Belongs to the enoyl-CoA hydratase isomerase family. MenB subfamily K01661 - 4.1.3.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006675 600.0
PJD3_k127_6319775_1 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005289 550.0
PJD3_k127_6319775_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 462.0
PJD3_k127_6319775_3 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007351 430.0
PJD3_k127_6319775_4 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 418.0
PJD3_k127_6319775_5 Belongs to the ABC transporter superfamily K02010,K02017,K15497 - 3.6.3.29,3.6.3.30,3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 408.0
PJD3_k127_6319775_6 MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 308.0
PJD3_k127_6319775_7 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000001837 246.0
PJD3_k127_6319775_8 Aminoacyl-tRNA editing domain K19055 - - 0.0000000000000000000000000000000000000000000000000000003556 197.0
PJD3_k127_6509148_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1018.0
PJD3_k127_6509148_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000007255 170.0
PJD3_k127_6527406_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 4.427e-308 950.0
PJD3_k127_6527406_10 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007852 484.0
PJD3_k127_6527406_11 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 451.0
PJD3_k127_6527406_12 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 407.0
PJD3_k127_6527406_13 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008204 402.0
PJD3_k127_6527406_14 Belongs to the peptidase S1B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000681 378.0
PJD3_k127_6527406_15 Iron-containing redox enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006886 332.0
PJD3_k127_6527406_16 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 331.0
PJD3_k127_6527406_17 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 306.0
PJD3_k127_6527406_18 PFAM AMP-dependent synthetase and ligase K01911 GO:0003674,GO:0003824,GO:0008150,GO:0008756,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0040007 6.2.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009129 310.0
PJD3_k127_6527406_2 AMP-binding enzyme K00666 - - 2.142e-235 743.0
PJD3_k127_6527406_20 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002885 244.0
PJD3_k127_6527406_22 Belongs to the bacterial histone-like protein family K05788 - - 0.0000000000000000000000000000000000000000000000000000002281 195.0
PJD3_k127_6527406_23 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.00000000000000000000000000000000000000000000001444 173.0
PJD3_k127_6527406_25 4-phosphoerythronate dehydrogenase activity - - - 0.00000000000000000000000000000008901 135.0
PJD3_k127_6527406_27 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.000000000000000000003564 94.0
PJD3_k127_6527406_29 RHS Repeat - - - 0.0000000000001021 75.0
PJD3_k127_6527406_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 7.712e-223 694.0
PJD3_k127_6527406_4 - - - - 2.001e-201 638.0
PJD3_k127_6527406_5 PFAM AMP-dependent synthetase and ligase - - - 2.483e-198 631.0
PJD3_k127_6527406_6 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 614.0
PJD3_k127_6527406_7 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 576.0
PJD3_k127_6527406_8 carboxylase K01965,K01968,K13777 - 6.4.1.3,6.4.1.4,6.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 566.0
PJD3_k127_6527406_9 PFAM carboxyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 548.0
PJD3_k127_697922_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1455.0
PJD3_k127_697922_1 elongation factor Tu domain 2 protein K06207 - - 0.0 1060.0
PJD3_k127_697922_10 depolymerase K05973 - 3.1.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 371.0
PJD3_k127_697922_11 PFAM ABC transporter K01990,K09689,K09691 - 3.6.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 366.0
PJD3_k127_697922_12 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 355.0
PJD3_k127_697922_13 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000477 287.0
PJD3_k127_697922_14 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002472 274.0
PJD3_k127_697922_15 Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002537 270.0
PJD3_k127_697922_16 FHA Domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000006264 234.0
PJD3_k127_697922_17 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000001003 232.0
PJD3_k127_697922_18 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000149 222.0
PJD3_k127_697922_2 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 3.038e-298 924.0
PJD3_k127_697922_22 IMP dehydrogenase activity K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000001983 113.0
PJD3_k127_697922_24 Pfam Response regulator receiver - - - 0.000000000000000311 91.0
PJD3_k127_697922_25 PFAM ABC-2 type transporter K01992,K09690 - - 0.0000000000000223 82.0
PJD3_k127_697922_27 recombinase activity - - - 0.00001094 48.0
PJD3_k127_697922_3 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 3.561e-287 891.0
PJD3_k127_697922_4 ABC transporter K06158 - - 1.426e-285 886.0
PJD3_k127_697922_5 PFAM aminoacyl-tRNA synthetase class Ib K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005322 538.0
PJD3_k127_697922_6 nuclear chromosome segregation K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009984 542.0
PJD3_k127_697922_7 Esterase-like activity of phytase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006399 407.0
PJD3_k127_697922_8 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 406.0
PJD3_k127_697922_9 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 377.0
PJD3_k127_746536_0 Cytochrome c - - - 0.0 1643.0
PJD3_k127_746536_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1460.0
PJD3_k127_746536_10 COG3209 Rhs family protein - - - 1.321e-300 927.0
PJD3_k127_746536_11 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 6.645e-299 930.0
PJD3_k127_746536_12 Bacterial extracellular solute-binding proteins, family 5 Middle K13893 - - 9.179e-292 905.0
PJD3_k127_746536_13 pfam abc1 K03688 - - 1.217e-275 857.0
PJD3_k127_746536_14 Type II and III secretion system protein K02666 - - 1.691e-269 840.0
PJD3_k127_746536_15 Bacterial type II and III secretion system protein K02280 - - 1.723e-248 774.0
PJD3_k127_746536_16 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 1.305e-228 715.0
PJD3_k127_746536_17 - - - - 7.279e-225 701.0
PJD3_k127_746536_18 Cytochrome b(C-terminal)/b6/petD - - - 1.014e-216 674.0
PJD3_k127_746536_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1456.0
PJD3_k127_746536_20 Thiolase, C-terminal domain K07508 - 2.3.1.16 3.837e-209 654.0
PJD3_k127_746536_21 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 6.129e-196 615.0
PJD3_k127_746536_22 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 610.0
PJD3_k127_746536_23 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 596.0
PJD3_k127_746536_24 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 554.0
PJD3_k127_746536_25 dTDP-4-dehydrorhamnose reductase activity K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 550.0
PJD3_k127_746536_26 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006989 550.0
PJD3_k127_746536_27 PFAM Cytochrome b b6 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 538.0
PJD3_k127_746536_28 Cytochrome c oxidase subunit K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005178 534.0
PJD3_k127_746536_29 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 522.0
PJD3_k127_746536_3 PFAM Type II secretion system protein E K02283,K03609 - - 0.0 1243.0
PJD3_k127_746536_30 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 504.0
PJD3_k127_746536_31 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004583 494.0
PJD3_k127_746536_32 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007343 486.0
PJD3_k127_746536_33 flp pilus assembly protein K12510 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000573 469.0
PJD3_k127_746536_34 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006414 474.0
PJD3_k127_746536_35 flp pilus assembly protein CpaB K02279 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 449.0
PJD3_k127_746536_36 maltose O-acetyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 429.0
PJD3_k127_746536_37 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 421.0
PJD3_k127_746536_38 Cytochrome oxidase assembly protein K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 397.0
PJD3_k127_746536_39 Cytochrome c oxidase, subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 387.0
PJD3_k127_746536_4 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0 1221.0
PJD3_k127_746536_40 SCO1 SenC K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 376.0
PJD3_k127_746536_41 deoxyhypusine monooxygenase activity K00590 - 2.1.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 379.0
PJD3_k127_746536_42 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 363.0
PJD3_k127_746536_43 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 353.0
PJD3_k127_746536_44 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 345.0
PJD3_k127_746536_45 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 334.0
PJD3_k127_746536_46 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009513 321.0
PJD3_k127_746536_47 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 314.0
PJD3_k127_746536_48 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 307.0
PJD3_k127_746536_5 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.0 1123.0
PJD3_k127_746536_50 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000968 287.0
PJD3_k127_746536_51 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001662 280.0
PJD3_k127_746536_53 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006649 271.0
PJD3_k127_746536_54 Type IV leader peptidase family K02278 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000008053 255.0
PJD3_k127_746536_55 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001652 249.0
PJD3_k127_746536_59 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000003067 248.0
PJD3_k127_746536_6 Surface antigen K07277 - - 0.0 1094.0
PJD3_k127_746536_60 ABC-type transport system involved in multi-copper enzyme maturation, permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003865 248.0
PJD3_k127_746536_61 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004702 241.0
PJD3_k127_746536_62 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000001475 242.0
PJD3_k127_746536_63 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000005788 244.0
PJD3_k127_746536_65 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000004717 235.0
PJD3_k127_746536_66 Protein of unknown function (DUF420) K08976 - - 0.00000000000000000000000000000000000000000000000000000000000000001501 228.0
PJD3_k127_746536_68 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02409,K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000001915 222.0
PJD3_k127_746536_69 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000002235 220.0
PJD3_k127_746536_7 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0 1088.0
PJD3_k127_746536_70 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000000000000000000000000003798 211.0
PJD3_k127_746536_72 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000553 190.0
PJD3_k127_746536_78 - - - - 0.000000000000000000000000000000000000008217 147.0
PJD3_k127_746536_79 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000123 152.0
PJD3_k127_746536_8 TamB, inner membrane protein subunit of TAM complex K09800 - - 6.253e-317 1014.0
PJD3_k127_746536_80 Pfam:N_methyl_2 K02650 GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 - 0.000000000000000000000000000000000001329 144.0
PJD3_k127_746536_82 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000000000000007597 131.0
PJD3_k127_746536_85 regulation of DNA repair K03565,K19002 - 2.4.1.337 0.000000000000000000000003399 108.0
PJD3_k127_746536_87 Flp Fap pilin component K02651 - - 0.0000000000000000006171 87.0
PJD3_k127_746536_9 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.183e-301 947.0
PJD3_k127_746536_96 - - - - 0.0001278 45.0
PJD3_k127_746537_0 Phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0 1256.0
PJD3_k127_746537_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 7.435e-207 648.0
PJD3_k127_746537_2 YadA-like membrane anchor domain K12342 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 556.0
PJD3_k127_746537_5 Domain of unknown function (DUF4416) - - - 0.0001393 44.0
PJD3_k127_79110_0 Phage regulatory protein - - - 0.000000000000000000000000000004623 123.0
PJD3_k127_79110_1 Predicted membrane protein (DUF2157) - - - 0.0000000000000000000001268 110.0
PJD3_k127_79110_2 Resolvase, N terminal domain - - - 0.000000000000002859 78.0
PJD3_k127_79110_3 GDYXXLXY protein - - - 0.000000009717 64.0
PJD3_k127_79110_4 - - - - 0.00001719 46.0
PJD3_k127_800564_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 1.84e-310 957.0
PJD3_k127_800564_1 FAD binding domain of DNA photolyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 518.0
PJD3_k127_800564_10 PFAM alpha beta hydrolase fold K01259 - 3.4.11.5 0.000000000000004388 85.0
PJD3_k127_800564_11 response to hydrogen peroxide - - - 0.00001739 51.0
PJD3_k127_800564_2 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 435.0
PJD3_k127_800564_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000982 427.0
PJD3_k127_800564_4 S1 domain K00243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 312.0
PJD3_k127_800564_5 - - - - 0.0000000000000000000000000000000000000000000000000003957 197.0
PJD3_k127_800564_7 - - - - 0.000000000000000000000000000000000000001 157.0
PJD3_k127_800564_8 Bacterial regulatory proteins, tetR family K16137 - - 0.000000000000000000000000000000005627 133.0
PJD3_k127_800564_9 Removes 5-oxoproline from various penultimate amino acid residues except L-proline K01304 GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:1901564 3.4.19.3 0.00000000000000000000003389 106.0
PJD3_k127_802063_0 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 502.0
PJD3_k127_802063_1 oxidoreductase FAD NAD(P)-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004019 382.0
PJD3_k127_802063_10 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000008362 199.0
PJD3_k127_802063_11 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000009966 182.0
PJD3_k127_802063_12 Transcriptional regulator K13771 - - 0.000000000000000000000000000000000000000004691 158.0
PJD3_k127_802063_13 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.000000000000000000000000000006485 126.0
PJD3_k127_802063_14 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000004068 120.0
PJD3_k127_802063_15 COG4319 Ketosteroid isomerase homolog - - - 0.000000000000000000000002044 109.0
PJD3_k127_802063_17 AAA domain - - - 0.0000000000005744 72.0
PJD3_k127_802063_2 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004564 384.0
PJD3_k127_802063_3 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 308.0
PJD3_k127_802063_4 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002674 293.0
PJD3_k127_802063_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001093 278.0
PJD3_k127_802063_6 Domain of unknown function (DUF4423) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003882 266.0
PJD3_k127_802063_7 Pyoverdine/dityrosine biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000003995 242.0
PJD3_k127_802063_9 Bacterial-like globin - - - 0.0000000000000000000000000000000000000000000000000000000001024 205.0
PJD3_k127_802099_1 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0 1659.0
PJD3_k127_802099_10 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007527 494.0
PJD3_k127_802099_12 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity K14540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 462.0
PJD3_k127_802099_13 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007518 424.0
PJD3_k127_802099_14 RNA-metabolising metallo-beta-lactamase K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 412.0
PJD3_k127_802099_15 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 404.0
PJD3_k127_802099_16 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 388.0
PJD3_k127_802099_18 Glycosyltransferase family 28 N-terminal domain K16444 - 2.4.1.310 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 376.0
PJD3_k127_802099_19 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 379.0
PJD3_k127_802099_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1525.0
PJD3_k127_802099_20 Pseudouridine synthase K06175 - 5.4.99.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 353.0
PJD3_k127_802099_21 Cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 364.0
PJD3_k127_802099_22 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 349.0
PJD3_k127_802099_23 chemotaxis K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 353.0
PJD3_k127_802099_24 BtpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 339.0
PJD3_k127_802099_26 Fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 331.0
PJD3_k127_802099_27 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 334.0
PJD3_k127_802099_28 metalloendopeptidase activity K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009682 321.0
PJD3_k127_802099_29 ATP cone domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 315.0
PJD3_k127_802099_3 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 8.157e-321 986.0
PJD3_k127_802099_30 metalloendopeptidase activity K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007168 308.0
PJD3_k127_802099_31 Esterase PHB depolymerase K03932 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 310.0
PJD3_k127_802099_32 Belongs to the GST superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 299.0
PJD3_k127_802099_33 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 322.0
PJD3_k127_802099_34 transferase hexapeptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 293.0
PJD3_k127_802099_35 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 282.0
PJD3_k127_802099_36 manganese ion transmembrane transporter activity - GO:0000041,GO:0003674,GO:0005215,GO:0005384,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006828,GO:0008150,GO:0008324,GO:0010035,GO:0010038,GO:0010042,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0042221,GO:0044464,GO:0046873,GO:0046915,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071421,GO:0071944,GO:0098655,GO:0098660,GO:0098662 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001422 269.0
PJD3_k127_802099_37 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001933 270.0
PJD3_k127_802099_38 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004255 260.0
PJD3_k127_802099_39 Cytochrome b/b6/petB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000478 266.0
PJD3_k127_802099_4 Type III restriction protein res subunit K19789 - - 2.79e-293 908.0
PJD3_k127_802099_40 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008352 269.0
PJD3_k127_802099_41 Glutathione peroxidase K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000006428 256.0
PJD3_k127_802099_42 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002668 243.0
PJD3_k127_802099_43 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002994 258.0
PJD3_k127_802099_44 cytochrome K17230 - - 0.00000000000000000000000000000000000000000000000000000000000000000000681 237.0
PJD3_k127_802099_45 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000001866 242.0
PJD3_k127_802099_46 DoxX-like family - - - 0.000000000000000000000000000000000000000000000000000000000000005558 233.0
PJD3_k127_802099_49 Domain of unknown function (DUF4010) - - - 0.00000000000000000000000000000000000000000000000000000000000002015 224.0
PJD3_k127_802099_5 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 2.106e-269 834.0
PJD3_k127_802099_50 Metallopeptidase family M24 - - - 0.0000000000000000000000000000000000000000000000000000000000005286 217.0
PJD3_k127_802099_51 Alkylphosphonate utilization operon protein PhnA K06193 - - 0.000000000000000000000000000000000000000000000000000000000005425 209.0
PJD3_k127_802099_52 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000001003 207.0
PJD3_k127_802099_54 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000003681 200.0
PJD3_k127_802099_55 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00847,K01193 - 2.7.1.4,3.2.1.26 0.000000000000000000000000000000000000000000000000000006998 199.0
PJD3_k127_802099_56 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000001357 196.0
PJD3_k127_802099_58 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000001446 181.0
PJD3_k127_802099_59 Glycine-zipper domain - - - 0.000000000000000000000000000000000000000000001672 168.0
PJD3_k127_802099_6 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 5.36e-196 617.0
PJD3_k127_802099_60 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000003334 158.0
PJD3_k127_802099_61 Protein of unknown function, DUF - - - 0.00000000000000000000000000000000000000003707 156.0
PJD3_k127_802099_62 diguanylate cyclase activity K02000,K04767,K05847,K07168,K09137 - 3.6.3.32 0.000000000000000000000000000000000000002323 152.0
PJD3_k127_802099_63 L-valine transmembrane transporter activity - - - 0.0000000000000000000000000000000000002 150.0
PJD3_k127_802099_64 Protein of unknown function (DUF2288) - - - 0.000000000000000000000000000000000001086 141.0
PJD3_k127_802099_65 Uncharacterised protein family (UPF0093) - - - 0.0000000000000000000000000000000001546 138.0
PJD3_k127_802099_66 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000001568 145.0
PJD3_k127_802099_67 Bacterial periplasmic substrate-binding proteins K02030 - - 0.000000000000000000000000000000002313 137.0
PJD3_k127_802099_68 electron transfer activity - - - 0.00000000000000000000000000000001592 132.0
PJD3_k127_802099_69 response regulator K20971 - - 0.00000000000000000000000000000004027 144.0
PJD3_k127_802099_70 integral membrane protein - - - 0.000000000000000000000000000000203 128.0
PJD3_k127_802099_72 Histidine kinase-like ATPases - - - 0.0000000000000000000000000001963 129.0
PJD3_k127_802099_73 Protein of unknown function (DUF2089) - - - 0.0000000000000000000000000004343 119.0
PJD3_k127_802099_74 response regulator K03413 - - 0.0000000000000000000000000007939 117.0
PJD3_k127_802099_75 PFAM metallophosphoesterase K07313 - 3.1.3.16 0.00000000000000000000000007831 114.0
PJD3_k127_802099_76 Peptidase propeptide and YPEB domain - - - 0.000000000000000000000000143 110.0
PJD3_k127_802099_77 PFAM Dopa 4,5-dioxygenase family K10253 - - 0.000000000000000000000000144 109.0
PJD3_k127_802099_78 Haem-NO-binding - - - 0.0000000000000000000000003655 111.0
PJD3_k127_802099_79 Protein of unknown function (DUF1232) - - - 0.000000000000000000000001886 106.0
PJD3_k127_802099_80 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.000000000000000000000006925 113.0
PJD3_k127_802099_81 TetR Family - - - 0.00000000000000000001209 100.0
PJD3_k127_802099_82 arsenate reductase K00537 - 1.20.4.1 0.00000000000000000001554 95.0
PJD3_k127_802099_83 cheY-homologous receiver domain K03413 - - 0.00000000000000000006145 98.0
PJD3_k127_802099_84 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion K02564 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006040,GO:0008150,GO:0008152,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901135 3.5.99.6 0.0000000000000000003574 95.0
PJD3_k127_802099_85 - - - - 0.0000000000000000003774 89.0
PJD3_k127_802099_86 6-phosphogluconolactonase activity - - - 0.0000000000000000005727 94.0
PJD3_k127_802099_89 GlcNAc-PI de-N-acetylase - - - 0.0000000000000003502 89.0
PJD3_k127_802099_9 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006379 494.0
PJD3_k127_802099_90 - - - - 0.000000000000006383 79.0
PJD3_k127_802099_91 Branched-chain amino acid transport protein (AzlD) - - - 0.00000000000006612 76.0
PJD3_k127_802099_93 BEST Arabidopsis thaliana protein match is K20283 - - 0.000000005002 71.0
PJD3_k127_802099_95 Histidine kinase K03407 - 2.7.13.3 0.0000002698 61.0
PJD3_k127_802099_96 epimerase - - - 0.0000684 53.0
PJD3_k127_802099_97 Protein of unknown function (DUF4019) - - - 0.00009502 54.0
PJD3_k127_802099_99 IrrE N-terminal-like domain - - - 0.0002146 51.0
PJD3_k127_817696_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein K00239,K00244 - 1.3.5.1,1.3.5.4 0.0 1151.0
PJD3_k127_817696_1 SMART Elongator protein 3 MiaB NifB - - - 0.0 1090.0
PJD3_k127_817696_10 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 6.432e-201 631.0
PJD3_k127_817696_101 Protein of unknown function (DUF3617) - - - 0.0003058 49.0
PJD3_k127_817696_11 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004487 605.0
PJD3_k127_817696_12 CobQ CobB MinD ParA nucleotide binding K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 592.0
PJD3_k127_817696_13 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 576.0
PJD3_k127_817696_14 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 573.0
PJD3_k127_817696_15 Prokaryotic N-terminal methylation motif K02456,K02457,K02458,K02459,K02655,K10926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 563.0
PJD3_k127_817696_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 529.0
PJD3_k127_817696_17 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 507.0
PJD3_k127_817696_18 Thiol disulfide interchange protein dsbA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 507.0
PJD3_k127_817696_19 Receptor K16087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000366 505.0
PJD3_k127_817696_2 Pyruvate phosphate dikinase K01007,K21787 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016999,GO:0017000,GO:0017144,GO:0044237,GO:0044249 2.7.9.2 0.0 1037.0
PJD3_k127_817696_20 Domain of unknown function (DUF4105) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009683 502.0
PJD3_k127_817696_22 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 457.0
PJD3_k127_817696_23 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 479.0
PJD3_k127_817696_24 drug resistance transporter, Bcr CflA K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 451.0
PJD3_k127_817696_25 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 435.0
PJD3_k127_817696_26 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 386.0
PJD3_k127_817696_28 PFAM Sodium calcium exchanger membrane region K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007518 375.0
PJD3_k127_817696_29 TIGRFAM hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 370.0
PJD3_k127_817696_3 ABC transporter - - - 1.287e-302 932.0
PJD3_k127_817696_30 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 367.0
PJD3_k127_817696_31 Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA K00564,K11391 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052916,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.172,2.1.1.174 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 371.0
PJD3_k127_817696_32 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 358.0
PJD3_k127_817696_33 Trypsin-like serine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 357.0
PJD3_k127_817696_35 succinate dehydrogenase K00241 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 324.0
PJD3_k127_817696_36 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006039 312.0
PJD3_k127_817696_37 Acetyltransferase (GNAT) family K06976 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007383 315.0
PJD3_k127_817696_39 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004103 309.0
PJD3_k127_817696_40 Methyltransferase K06968 - 2.1.1.186 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 293.0
PJD3_k127_817696_41 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 290.0
PJD3_k127_817696_42 Dolichol kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003388 278.0
PJD3_k127_817696_43 Phosphomannose isomerase type I K01809 - 5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002487 280.0
PJD3_k127_817696_45 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003313 274.0
PJD3_k127_817696_46 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000002387 267.0
PJD3_k127_817696_47 LysM domain protein K07261 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002386 262.0
PJD3_k127_817696_48 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004208 258.0
PJD3_k127_817696_49 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003243 259.0
PJD3_k127_817696_5 PFAM Sodium sulphate symporter K03319,K11106 - - 3.046e-251 781.0
PJD3_k127_817696_50 Protein of unknown function (DUF3015) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004401 252.0
PJD3_k127_817696_51 HNH nucleases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003656 244.0
PJD3_k127_817696_52 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004977 245.0
PJD3_k127_817696_54 protein methyltransferase activity K11434,K20421 - 2.1.1.303,2.1.1.319 0.000000000000000000000000000000000000000000000000000000000000000004151 233.0
PJD3_k127_817696_55 Acyl-ACP thioesterase - - - 0.00000000000000000000000000000000000000000000000000000000000008595 222.0
PJD3_k127_817696_59 metalloendopeptidase activity K03799 - - 0.0000000000000000000000000000000000000000000000000000000001203 211.0
PJD3_k127_817696_6 Pyridine nucleotide-disulphide oxidoreductase K03387 - - 3.21e-231 725.0
PJD3_k127_817696_60 Multi-copper polyphenol oxidoreductase laccase - - - 0.0000000000000000000000000000000000000000000000000000000002334 208.0
PJD3_k127_817696_61 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000007537 213.0
PJD3_k127_817696_62 - - - - 0.0000000000000000000000000000000000000000000000000000002419 207.0
PJD3_k127_817696_65 NADPH-quinone reductase (modulator of drug activity B) - - - 0.00000000000000000000000000000000000000000000000000006072 192.0
PJD3_k127_817696_66 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000001419 190.0
PJD3_k127_817696_67 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000005429 174.0
PJD3_k127_817696_68 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000002039 179.0
PJD3_k127_817696_69 Belongs to the DsbB family K03611 - - 0.000000000000000000000000000000000000000000002983 168.0
PJD3_k127_817696_7 Acts as a magnesium transporter K06213 - - 1.402e-222 698.0
PJD3_k127_817696_70 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.000000000000000000000000000000000000000000005083 165.0
PJD3_k127_817696_71 histone H2A-K13 ubiquitination K01338,K07157 - 3.4.21.53 0.0000000000000000000000000000000000000000001021 168.0
PJD3_k127_817696_72 - - - - 0.000000000000000000000000000000000000000002223 162.0
PJD3_k127_817696_73 PFAM Class I peptide chain release factor K15034 - - 0.000000000000000000000000000000000000000002381 158.0
PJD3_k127_817696_74 MAPEG family - - - 0.000000000000000000000000000000000000000005342 158.0
PJD3_k127_817696_75 PFAM CBS domain containing protein K04767 - - 0.0000000000000000000000000000000000000001318 154.0
PJD3_k127_817696_76 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000002116 138.0
PJD3_k127_817696_78 Domain of unknown function (DUF4442) - - - 0.00000000000000000000000000000006706 130.0
PJD3_k127_817696_8 Carbamoyltransferase C-terminus K00612 - - 1.694e-219 696.0
PJD3_k127_817696_81 tRNA (adenine(22)-N(1))-methyltransferase K06967 - 2.1.1.217 0.000000000000000000000000001985 119.0
PJD3_k127_817696_82 enzyme-directed rRNA 2'-O-methylation K15333 - 2.1.1.34 0.000000000000000000000000002824 120.0
PJD3_k127_817696_88 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000838 96.0
PJD3_k127_817696_89 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000008879 93.0
PJD3_k127_817696_9 Flavin containing amine oxidoreductase - - - 1.709e-207 658.0
PJD3_k127_817696_90 Thioredoxin-like - - - 0.00000000000000001649 88.0
PJD3_k127_817696_92 protein conserved in bacteria K09975 - - 0.000000000000001192 84.0
PJD3_k127_817696_95 - - - - 0.000000000000002353 81.0
PJD3_k127_826054_0 domain protein - - - 0.0 1419.0
PJD3_k127_826054_1 Protein of unknown function, DUF255 K06888 - - 0.0 1098.0
PJD3_k127_826054_10 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000000000000000000000000000000001171 226.0
PJD3_k127_826054_11 Domain of unknown function (DUF4416) - - - 0.00000000000000000000000000000000000000000004301 166.0
PJD3_k127_826054_13 methyltransferase activity - - - 0.0000000009958 67.0
PJD3_k127_826054_2 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003193 595.0
PJD3_k127_826054_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 546.0
PJD3_k127_826054_5 PFAM L-carnitine dehydratase bile acid-inducible protein F K01796 - 5.1.99.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 429.0
PJD3_k127_826054_6 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005158 342.0
PJD3_k127_826054_7 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 290.0
PJD3_k127_826054_8 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007222 247.0
PJD3_k127_826054_9 D-alanyl-D-alanine carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000001051 232.0