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Overview

ID MAG02934
Name PJD3_bin.25
Sample SMP0069
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Flavobacteriales
Family Crocinitomicaceae
Genus UBA4466
Species
Assembly information
Completeness (%) 88.24
Contamination (%) 3.06
GC content (%) 39.0
N50 (bp) 7,252
Genome size (bp) 2,869,726

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2604

Gene name Description KEGG GOs EC E-value Score Sequence
PJD3_k127_1021658_0 PFAM Bacterial trigger factor protein (TF) K03545 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 524.0
PJD3_k127_1021658_1 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 463.0
PJD3_k127_1021658_2 ABC transporter K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000009813 229.0
PJD3_k127_1021658_3 Domain of unknown function (DUF3127) - - - 0.00000000000000000000000000000000000000000000000000000345 192.0
PJD3_k127_1021658_4 - - - - 0.00003569 48.0
PJD3_k127_1040442_0 acetyl-CoA hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005325 557.0
PJD3_k127_1040442_1 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 455.0
PJD3_k127_1045502_0 Bacterial DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1034.0
PJD3_k127_1045502_1 Esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 611.0
PJD3_k127_1045502_2 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 350.0
PJD3_k127_1047017_0 Glycosyl transferase family 21 K00786 - - 5.066e-266 831.0
PJD3_k127_1047017_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 334.0
PJD3_k127_1047017_10 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000000006509 126.0
PJD3_k127_1047017_12 Cytochrome c - - - 0.0000000000000004233 82.0
PJD3_k127_1047017_2 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 329.0
PJD3_k127_1047017_4 Pfam Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 306.0
PJD3_k127_1047017_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007187 293.0
PJD3_k127_1047017_6 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003916 272.0
PJD3_k127_1047017_7 Pyridine nucleotide-disulphide oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004531 248.0
PJD3_k127_1047017_8 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000009405 197.0
PJD3_k127_1047017_9 Reeler domain - - - 0.0000000000000000000000000000000000000000000000000002034 196.0
PJD3_k127_109807_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 389.0
PJD3_k127_109807_1 Glutamine synthetase type III N terminal K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004287 279.0
PJD3_k127_1102549_0 Protein of unknown function, DUF255 K06888 - - 9.147e-239 755.0
PJD3_k127_1102549_1 Membrane protein involved in D-alanine export K19294 - - 4.307e-223 704.0
PJD3_k127_1102549_2 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 507.0
PJD3_k127_1102549_3 LysM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 494.0
PJD3_k127_1102549_5 NAD(P)H-binding K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000423 176.0
PJD3_k127_1102710_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.753e-217 693.0
PJD3_k127_1102710_1 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 547.0
PJD3_k127_1102710_2 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00105,K00111 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.1.3.21,1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009864 450.0
PJD3_k127_1102710_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 411.0
PJD3_k127_1102710_4 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 382.0
PJD3_k127_1102710_5 Patatin-like phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 336.0
PJD3_k127_1102710_6 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000001692 228.0
PJD3_k127_1102710_7 Sigma 54 modulation protein / S30EA ribosomal protein K05808 - - 0.00000000000000000008506 92.0
PJD3_k127_1110516_0 Tetratricopeptide repeats - - - 1.906e-269 855.0
PJD3_k127_1110516_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005828 415.0
PJD3_k127_1110516_2 TIGRFAM DNA-binding regulatory protein, YebC PmpR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000201 267.0
PJD3_k127_1110516_3 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000000000000919 199.0
PJD3_k127_1110516_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000000000629 197.0
PJD3_k127_1110516_5 Polymer-forming cytoskeletal - - - 0.0000000000000000000000005858 108.0
PJD3_k127_1110516_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000001407 92.0
PJD3_k127_1110516_7 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.0000000000000003099 80.0
PJD3_k127_1110516_8 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.000000000009711 65.0
PJD3_k127_111472_0 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 344.0
PJD3_k127_111472_1 Predicted membrane protein (DUF2207) - - - 0.000000000000000000000000000000000000000000000000003906 189.0
PJD3_k127_111472_2 PFAM LemA family K03744 - - 0.000000000000000000000000000000000000000001224 162.0
PJD3_k127_111472_3 MOSC domain - - - 0.00000000000000000000000000000000009584 138.0
PJD3_k127_1126281_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1467.0
PJD3_k127_1126281_1 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 7.788e-212 663.0
PJD3_k127_1126281_11 SufE protein probably involved in Fe-S center assembly K02426 - - 0.00000000000000000000000000000000000000000000000000000000002464 207.0
PJD3_k127_1126281_12 TIGRFAM FeS assembly SUF system protein - - - 0.000000000000000000000000000000000000000001247 158.0
PJD3_k127_1126281_13 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008830,GO:0009058,GO:0009059,GO:0009103,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0033554,GO:0033692,GO:0034637,GO:0034645,GO:0042221,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0045226,GO:0046379,GO:0046677,GO:0050896,GO:0051716,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.1.3.13 0.00000000000000000000000000000004376 127.0
PJD3_k127_1126281_14 Transglutaminase-like - - - 0.0000000000000000000000000003025 123.0
PJD3_k127_1126281_15 - - - - 0.000000000000000000000000008858 126.0
PJD3_k127_1126281_16 Polyketide cyclase - - - 0.000002438 49.0
PJD3_k127_1126281_2 Cys/Met metabolism PLP-dependent enzyme K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 608.0
PJD3_k127_1126281_3 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008974 398.0
PJD3_k127_1126281_4 GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 316.0
PJD3_k127_1126281_5 PFAM Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 304.0
PJD3_k127_1126281_6 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 302.0
PJD3_k127_1126281_7 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006126 287.0
PJD3_k127_1126281_8 TIGRFAM 6-pyruvoyl tetrahydropterin synthase QueD family protein K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000002042 240.0
PJD3_k127_1126281_9 DNA polymerase Ligase (LigD) - - - 0.000000000000000000000000000000000000000000000000000000000000000008121 230.0
PJD3_k127_113014_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 488.0
PJD3_k127_113014_1 peptidase M1 K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 464.0
PJD3_k127_113014_2 AIR synthase related protein, N-terminal domain K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 377.0
PJD3_k127_113014_3 xyloglucan:xyloglucosyl transferase activity K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000652 377.0
PJD3_k127_113014_4 - - - - 0.000000000000000000001492 98.0
PJD3_k127_1142797_0 SPTR CHU large protein - - - 5.021e-272 864.0
PJD3_k127_1148516_0 Hsp70 protein K04043 - - 1.315e-248 772.0
PJD3_k127_1148516_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001311 244.0
PJD3_k127_117706_0 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 427.0
PJD3_k127_117706_1 CRP FNR family transcriptional regulator K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000003681 240.0
PJD3_k127_117706_2 Belongs to the peptidase S8 family - - - 0.00005017 54.0
PJD3_k127_120422_0 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001444 278.0
PJD3_k127_120422_1 ZIP Zinc transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002503 245.0
PJD3_k127_120422_2 - - - - 0.0000000000000000000000000000000000000000000000000000009405 197.0
PJD3_k127_120422_3 Domain of unknown function (DUF1987) - - - 0.00000000000000000000000000000000000000000000000001683 182.0
PJD3_k127_120422_4 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000001411 56.0
PJD3_k127_1212364_0 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 473.0
PJD3_k127_1212364_1 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 484.0
PJD3_k127_1212364_10 Kelch motif - - - 0.00000004421 66.0
PJD3_k127_1212364_11 amine dehydrogenase activity - - - 0.0005532 53.0
PJD3_k127_1212364_2 Nucleotidyl transferase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004343 453.0
PJD3_k127_1212364_3 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007928 425.0
PJD3_k127_1212364_4 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008574 400.0
PJD3_k127_1212364_5 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 369.0
PJD3_k127_1212364_6 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007355 361.0
PJD3_k127_1212364_7 Phospholipase, patatin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001204 260.0
PJD3_k127_1212364_8 PFAM SprT-like family - - - 0.0000000000000000000000000000000000000000000002786 174.0
PJD3_k127_1212364_9 transport - - - 0.0000000000000000000000000000000000000000000008968 174.0
PJD3_k127_1244888_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0 1031.0
PJD3_k127_1244888_1 metallopeptidase activity K01337 - 3.4.21.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008328 420.0
PJD3_k127_1263413_0 PFAM FG-GAP repeat - - - 3.056e-238 758.0
PJD3_k127_1263413_1 COG4452 Inner membrane protein involved in colicin E2 resistance K06143 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 441.0
PJD3_k127_1263413_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000003945 247.0
PJD3_k127_1263413_3 nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000664 231.0
PJD3_k127_1263413_4 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000002472 140.0
PJD3_k127_1277378_0 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 602.0
PJD3_k127_1277378_1 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002157 244.0
PJD3_k127_1277378_2 Pfam Mechanosensitive ion channel - - - 0.00000000000000000000000000000000001844 143.0
PJD3_k127_1282433_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1123.0
PJD3_k127_1282433_1 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 494.0
PJD3_k127_1282433_2 Sodium:sulfate symporter transmembrane region K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 344.0
PJD3_k127_1282433_3 Peroxide stress protein YaaA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009006 276.0
PJD3_k127_1282433_4 Belongs to the peptidase S8 family K05996 - 3.4.17.18 0.0000000000000000000000000000000001682 152.0
PJD3_k127_1282433_5 YceI-like domain - - - 0.00000000000000000000001359 117.0
PJD3_k127_1298799_0 4-amino-4-deoxy-L-arabinose transferase activity K03406 - - 0.000000000000000000000000000000003094 139.0
PJD3_k127_1298799_1 - - - - 0.0000000000000000003696 92.0
PJD3_k127_1315462_0 Amidohydrolase family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000855 608.0
PJD3_k127_1315462_1 unfolded protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 362.0
PJD3_k127_1315462_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000093 263.0
PJD3_k127_1315462_3 Subtilase family - - - 0.0000000000000000000000000000000000000000000002779 186.0
PJD3_k127_1315462_4 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000001095 148.0
PJD3_k127_1315462_5 TraB family - - - 0.000000000000000000000000000001694 126.0
PJD3_k127_1315462_6 - - - - 0.000004232 59.0
PJD3_k127_133757_0 BNR Asp-box repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 512.0
PJD3_k127_133757_1 xyloglucan:xyloglucosyl transferase activity K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000001444 265.0
PJD3_k127_13400_0 PFAM Carbamoyl-phosphate synthase L chain, ATP binding domain K01961 - 6.3.4.14,6.4.1.2 1.421e-264 817.0
PJD3_k127_13400_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 566.0
PJD3_k127_13400_2 Cytosol aminopeptidase family, catalytic domain K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 528.0
PJD3_k127_13400_3 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006627 505.0
PJD3_k127_13400_4 PFAM Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 502.0
PJD3_k127_13400_5 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000000000000000000000000001452 204.0
PJD3_k127_13400_6 Uncharacterized ACR, COG1399 - - - 0.0000000000000000000000000000000000000000000000000000169 195.0
PJD3_k127_13400_7 - - - - 0.0000000000000000000000000000000000000000000136 169.0
PJD3_k127_13400_8 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000000000165 120.0
PJD3_k127_1342895_0 Catalyzes the conversion of dihydroorotate to orotate K00226,K17723 - 1.3.1.1,1.3.98.1 1.252e-238 743.0
PJD3_k127_1342895_1 NADPH-dependent glutamate synthase beta chain and related K00266,K17722 - 1.3.1.1,1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 604.0
PJD3_k127_1342895_2 Pfam Carbon-nitrogen hydrolase K01431,K12251 - 3.5.1.53,3.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 433.0
PJD3_k127_1342895_3 Metallopeptidase family M24 K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344 407.0
PJD3_k127_1342895_4 MafB19-like deaminase K01485 - 3.5.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000002256 254.0
PJD3_k127_1342895_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000001663 156.0
PJD3_k127_1342895_6 - - - - 0.00000000000000001879 85.0
PJD3_k127_1342895_7 - - - - 0.000000008745 57.0
PJD3_k127_1342895_8 Belongs to the glycosyl hydrolase 13 family - - - 0.0001136 53.0
PJD3_k127_1342895_9 Recombinase - - - 0.0002309 48.0
PJD3_k127_1345721_0 chlorophyll binding - - - 3.557e-242 769.0
PJD3_k127_1345721_1 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000000000000000000000003389 207.0
PJD3_k127_1345721_2 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000000000000000000000000000000000006684 190.0
PJD3_k127_1345721_3 Protein of unknown function (DUF1624) - - - 0.000000000000000000000000000000000000000000000001163 184.0
PJD3_k127_1345721_4 ECF sigma factor K03088 - - 0.000000000000000000004757 95.0
PJD3_k127_1345721_5 - - - - 0.000000000000001066 78.0
PJD3_k127_1366891_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup K00239 - 1.3.5.1,1.3.5.4 0.0 1143.0
PJD3_k127_1366891_1 succinate dehydrogenase K00241 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 323.0
PJD3_k127_1366891_2 LD-carboxypeptidase K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 301.0
PJD3_k127_1366891_3 MafB19-like deaminase K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000000000000000438 222.0
PJD3_k127_1366891_4 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000004261 225.0
PJD3_k127_1366891_5 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000003746 164.0
PJD3_k127_1366891_6 PFAM Pentapeptide repeats (8 copies) - - - 0.0000002 64.0
PJD3_k127_1378438_0 ThiC-associated domain K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.0 1103.0
PJD3_k127_1378438_1 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000007554 250.0
PJD3_k127_1378438_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000004403 158.0
PJD3_k127_1378438_3 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.0000000000000000000000000000000000001956 149.0
PJD3_k127_1378438_5 ThiS family K03154 - - 0.00000002141 57.0
PJD3_k127_1378438_6 Heavy-metal-associated domain K08364 - - 0.00003199 56.0
PJD3_k127_1378438_7 Metallo-peptidase family M12B Reprolysin-like - - - 0.000488 51.0
PJD3_k127_1390601_0 PFAM tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 9.917e-303 934.0
PJD3_k127_1390601_1 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 562.0
PJD3_k127_1390601_10 PAS domain - - - 0.00000000000000000000000000007214 135.0
PJD3_k127_1390601_11 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000001038 82.0
PJD3_k127_1390601_2 dTDP-glucose pyrophosphorylase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 487.0
PJD3_k127_1390601_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 482.0
PJD3_k127_1390601_4 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 431.0
PJD3_k127_1390601_5 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 385.0
PJD3_k127_1390601_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 297.0
PJD3_k127_1390601_7 Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000000000000000000000000000002961 227.0
PJD3_k127_1390601_8 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.00000000000000000000000000000000000000000000000000000000000000009557 226.0
PJD3_k127_1390601_9 Histidine kinase - - - 0.00000000000000000000000000000000000000000000001513 179.0
PJD3_k127_139544_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.274e-231 721.0
PJD3_k127_139544_1 PFAM Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006217 560.0
PJD3_k127_1404913_0 Glycosyl hydrolases family 2, sugar binding domain K01192 - 3.2.1.25 1.345e-257 818.0
PJD3_k127_1404913_1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 - 1.2.1.12 2.065e-226 710.0
PJD3_k127_1404913_10 Acetyltransferase (GNAT) domain K00657 - 2.3.1.57 0.0000000000000000000000000007224 119.0
PJD3_k127_1404913_11 ABC-type multidrug transport system ATPase component K19340 - - 0.0000000000000002336 79.0
PJD3_k127_1404913_2 PDZ domain (Also known as DHR or GLGF) - - - 9.379e-197 624.0
PJD3_k127_1404913_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 540.0
PJD3_k127_1404913_4 Asparaginase K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 424.0
PJD3_k127_1404913_5 nitrous oxide K19341 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 393.0
PJD3_k127_1404913_6 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 322.0
PJD3_k127_1404913_7 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 322.0
PJD3_k127_1404913_8 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000004873 269.0
PJD3_k127_1404913_9 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000005639 173.0
PJD3_k127_1420856_0 Subtilase family - - - 7.394e-226 723.0
PJD3_k127_1420856_1 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 575.0
PJD3_k127_1420856_2 - - - - 0.0000000000000000000000000000004073 123.0
PJD3_k127_1421587_0 Zn_pept - - - 6.031e-277 873.0
PJD3_k127_1421587_1 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 1.089e-212 676.0
PJD3_k127_1421587_11 - - - - 0.000000000003401 73.0
PJD3_k127_1421587_2 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008311 626.0
PJD3_k127_1421587_3 Beta-eliminating lyase K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004797 541.0
PJD3_k127_1421587_4 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 365.0
PJD3_k127_1421587_5 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001945 276.0
PJD3_k127_1421587_6 CutC family K06201 - - 0.0000000000000000000000000000000000000000000000007206 183.0
PJD3_k127_1421587_7 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000001232 147.0
PJD3_k127_1421587_8 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000004414 131.0
PJD3_k127_1421587_9 Transcription elongation factor - - - 0.000000000000000000000000000009395 123.0
PJD3_k127_1433017_0 OmpA family K03640 - - 6.521e-260 818.0
PJD3_k127_1433017_1 - - - - 8.056e-201 648.0
PJD3_k127_1433017_2 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 518.0
PJD3_k127_1433017_3 PASTA K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000001411 224.0
PJD3_k127_1433017_4 Protein of unknown function (DUF2851) - - - 0.000000000000000000000000000000000000000000000000003197 194.0
PJD3_k127_1435003_0 Protein of unknown function (DUF2723) - - - 8.604e-254 813.0
PJD3_k127_1435003_1 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000001474 237.0
PJD3_k127_1435003_2 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000001137 215.0
PJD3_k127_1435003_3 Protein of unknown function (DUF2480) - - - 0.0000000000000000000000000000000000000000000000001163 181.0
PJD3_k127_1435003_4 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000297 182.0
PJD3_k127_1435003_5 Haem-binding domain - - - 0.00000000000000000000000000000000000000000000002238 175.0
PJD3_k127_1435003_6 Histidine phosphatase superfamily (branch 1) K08296 - - 0.000000000000000000003441 100.0
PJD3_k127_1435006_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 387.0
PJD3_k127_1435006_1 type I phosphodiesterase nucleotide pyrophosphatase - GO:0003674,GO:0003824,GO:0004035,GO:0004346,GO:0005488,GO:0005575,GO:0005623,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008877,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046872,GO:0046914,GO:0050308,GO:0050309,GO:0098519 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 348.0
PJD3_k127_1435006_2 PFAM chorismate binding K01665,K03342 - 2.6.1.85,4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 342.0
PJD3_k127_1435006_3 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003925 327.0
PJD3_k127_1435006_4 type I phosphodiesterase nucleotide pyrophosphatase - GO:0003674,GO:0003824,GO:0004035,GO:0004346,GO:0005488,GO:0005575,GO:0005623,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008877,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046872,GO:0046914,GO:0050308,GO:0050309,GO:0098519 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001724 275.0
PJD3_k127_1435006_5 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000154 259.0
PJD3_k127_1435006_6 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001046 241.0
PJD3_k127_1435006_7 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000007932 229.0
PJD3_k127_1439120_0 PFAM Peptidase family M20 M25 M40 - - - 1.753e-245 763.0
PJD3_k127_1439120_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 598.0
PJD3_k127_1439120_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 578.0
PJD3_k127_1439120_3 metallopeptidase activity K01337 - 3.4.21.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007721 484.0
PJD3_k127_1439120_4 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 423.0
PJD3_k127_1439120_5 - - - - 0.0000000000000000000000000000000000000000000004697 170.0
PJD3_k127_1439120_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000315 70.0
PJD3_k127_1448355_0 7TMR-DISM extracellular 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 410.0
PJD3_k127_1448355_1 Ribosomal protein L9, C-terminal domain K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000007309 206.0
PJD3_k127_1452034_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1581.0
PJD3_k127_1462604_0 TIGRFAM oligoendopeptidase, M3 family K08602 - - 1.103e-222 704.0
PJD3_k127_1462604_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 6.859e-203 637.0
PJD3_k127_1462604_10 Belongs to the peptidase S8 family - - - 0.0000000000000000002203 104.0
PJD3_k127_1462604_11 - - - - 0.000000000002195 72.0
PJD3_k127_1462604_2 Predicted permease YjgP/YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 494.0
PJD3_k127_1462604_3 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 381.0
PJD3_k127_1462604_4 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 311.0
PJD3_k127_1462604_5 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000018 271.0
PJD3_k127_1462604_6 Protein of unknown function (DUF2400) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002693 258.0
PJD3_k127_1462604_7 Pfam Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000008513 188.0
PJD3_k127_1462604_8 Glycosyl hydrolases family 18 - - - 0.0000000000000000000000000000000000000000000000000001655 210.0
PJD3_k127_1462604_9 - - - - 0.0000000000000000000000000000001697 131.0
PJD3_k127_1473257_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004734 561.0
PJD3_k127_1473257_1 - - - - 0.000000000000000000000000000000000000006183 152.0
PJD3_k127_1473257_2 Domain of unknown function (DUF4476) - - - 0.0000000000000000000000000000002125 136.0
PJD3_k127_1473257_3 Belongs to the universal stress protein A family - - - 0.00000001249 57.0
PJD3_k127_148744_0 unusual protein kinase K03688 - - 1.085e-207 660.0
PJD3_k127_148744_1 MORN repeat variant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 292.0
PJD3_k127_148744_2 DUF218 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003458 268.0
PJD3_k127_148744_3 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000002167 150.0
PJD3_k127_148744_4 PFAM Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000002902 127.0
PJD3_k127_148744_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000003017 124.0
PJD3_k127_148744_6 - - - - 0.000000000000000000000001173 107.0
PJD3_k127_1510397_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits - - - 7.614e-225 704.0
PJD3_k127_1510397_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit - - - 9.587e-209 661.0
PJD3_k127_1510397_10 ATP synthase, Delta/Epsilon chain, beta-sandwich domain K02114 - - 0.000000000000000000000000000000000000008339 149.0
PJD3_k127_1510397_11 - - - - 0.0000000000000000000000000000000001958 137.0
PJD3_k127_1510397_12 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000002061 130.0
PJD3_k127_1510397_13 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.00000000000000000000000000002055 119.0
PJD3_k127_1510397_14 TIGRFAM F1 F0 ATPase, Methanosarcina type, subunit 2 - - - 0.00000000000000004227 84.0
PJD3_k127_1510397_15 pectate lyase - - - 0.00003837 49.0
PJD3_k127_1510397_2 Phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006864 348.0
PJD3_k127_1510397_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 293.0
PJD3_k127_1510397_4 ATP synthase K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003771 259.0
PJD3_k127_1510397_5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000001768 201.0
PJD3_k127_1510397_6 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000000000000000000002362 177.0
PJD3_k127_1510397_7 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000001671 168.0
PJD3_k127_1510397_8 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000003327 170.0
PJD3_k127_1510397_9 regulator - - - 0.000000000000000000000000000000000000001579 150.0
PJD3_k127_1566780_0 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) K03321 - - 6.117e-208 659.0
PJD3_k127_1566780_1 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 496.0
PJD3_k127_1566780_2 Reversible hydration of carbon dioxide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001107 258.0
PJD3_k127_1566780_3 Protein of unknown function (DUF983) - - - 0.00000000000000000000001229 105.0
PJD3_k127_156785_0 COG4206 Outer membrane cobalamin receptor protein K02014 - - 0.0 1030.0
PJD3_k127_156785_1 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000001022 183.0
PJD3_k127_1612838_0 Succinate dehydrogenase fumarate reductase Fe-S protein subunit K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 434.0
PJD3_k127_1612838_1 PA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005382 281.0
PJD3_k127_1612838_2 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005033 276.0
PJD3_k127_1612838_3 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006715 259.0
PJD3_k127_1628363_0 TIGRFAM ATP-binding cassette protein, ChvD family K15738 - - 3.85e-322 990.0
PJD3_k127_1628363_1 PFAM Peptidase family M20 M25 M40 K01270 - - 1.65e-201 637.0
PJD3_k127_1628363_10 DNA-binding protein VF530 - - - 0.00000000000000000000000002366 109.0
PJD3_k127_1628363_11 Putative quorum-sensing-regulated virulence factor K09954 - - 0.000000000000000000000006149 102.0
PJD3_k127_1628363_12 helix-turn-helix domain protein - - - 0.000000000000000000006928 96.0
PJD3_k127_1628363_13 - - - - 0.00000000000000000006367 93.0
PJD3_k127_1628363_14 Protein of unknown function (DUF2752) - - - 0.0000000000000007041 80.0
PJD3_k127_1628363_15 - - - - 0.00000001528 63.0
PJD3_k127_1628363_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007878 567.0
PJD3_k127_1628363_3 helicase superfamily c-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 432.0
PJD3_k127_1628363_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008203 247.0
PJD3_k127_1628363_5 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000005744 233.0
PJD3_k127_1628363_6 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000003592 211.0
PJD3_k127_1629894_0 Protein of unknown function (DUF3494) - - - 0.0000000000000000000000000000000000000000000000000000000000000000002052 244.0
PJD3_k127_1635620_0 amino acid racemase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 559.0
PJD3_k127_1635620_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005924 462.0
PJD3_k127_1635620_2 Zn peptidase - - - 0.000000000000000000000000000000000000000000000009209 179.0
PJD3_k127_1635620_3 COG1473 Metal-dependent amidase aminoacylase carboxypeptidase - - - 0.000000000000000000000000000000009565 128.0
PJD3_k127_1636509_0 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009525 479.0
PJD3_k127_1636509_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 292.0
PJD3_k127_1636509_2 Bacterial DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000001124 256.0
PJD3_k127_1636509_3 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000000000000000000000000000000000000000000001093 224.0
PJD3_k127_1636509_4 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000003485 153.0
PJD3_k127_1636509_5 Protein of unknown function (DUF1573) - - - 0.00000000000000000000000000004603 120.0
PJD3_k127_1640564_0 PFAM Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II K01835 - 5.4.2.2 5.553e-229 716.0
PJD3_k127_1640564_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 4.307e-216 677.0
PJD3_k127_1640564_10 - - - - 0.000000000000000000000000000000000000000002145 162.0
PJD3_k127_1640564_11 4-vinyl reductase, 4VR K06382,K07013 - 3.1.3.16 0.000000000000000000000000000000000000004102 163.0
PJD3_k127_1640564_12 PAS domain - - - 0.0000000000000000000000000000000000000824 159.0
PJD3_k127_1640564_13 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000000000000000000000000000000001466 134.0
PJD3_k127_1640564_14 AAA domain, putative AbiEii toxin, Type IV TA system K09697 - 3.6.3.7 0.00000000000000000004628 90.0
PJD3_k127_1640564_15 C-terminal domain of CHU protein family - - - 0.00000000000000002145 97.0
PJD3_k127_1640564_16 atp-binding - - - 0.000000000001977 67.0
PJD3_k127_1640564_17 heme binding - - - 0.0001159 55.0
PJD3_k127_1640564_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 514.0
PJD3_k127_1640564_3 S1 P1 Nuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 477.0
PJD3_k127_1640564_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009604 475.0
PJD3_k127_1640564_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005748 470.0
PJD3_k127_1640564_6 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 406.0
PJD3_k127_1640564_7 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851 328.0
PJD3_k127_1640564_8 2-phosphosulpholactate phosphatase K05979 - 3.1.3.71 0.0000000000000000000000000000000000000000000000000000000000399 213.0
PJD3_k127_1640564_9 Rhodanese-like domain - - - 0.00000000000000000000000000000000000000000000000000001154 194.0
PJD3_k127_1642344_0 PFAM Carbamoyl-phosphate synthase L chain, ATP binding domain K01955 - 6.3.5.5 0.0 1716.0
PJD3_k127_1642344_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 4.99e-201 640.0
PJD3_k127_1642344_2 NlpC/P60 family K13695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 298.0
PJD3_k127_1642344_3 Protein of unknown function (DUF1573) - - - 0.00000000000000000000000000849 116.0
PJD3_k127_1642344_5 membrane protein (homolog of Drosophila rhomboid) K19225 - 3.4.21.105 0.00007341 54.0
PJD3_k127_1646377_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 323.0
PJD3_k127_1646377_1 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 296.0
PJD3_k127_1646377_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000000000000000000254 211.0
PJD3_k127_1646377_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000001914 158.0
PJD3_k127_1646377_4 lysyltransferase activity K07027 - - 0.00000000000000000000000004228 118.0
PJD3_k127_1646377_5 - - - - 0.00000000000000000000000008507 117.0
PJD3_k127_1646377_6 chlorophyll binding - - - 0.000000000000002241 90.0
PJD3_k127_1646377_7 PA domain - - - 0.00001466 58.0
PJD3_k127_1649414_0 Sulfatase-modifying factor enzyme 1 - - - 9.893e-300 923.0
PJD3_k127_1649414_1 Arginase family K01479 - 3.5.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006397 451.0
PJD3_k127_1649414_2 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009483 340.0
PJD3_k127_1649414_3 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 295.0
PJD3_k127_1649414_4 Gliding motility protein GldL - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003628 244.0
PJD3_k127_1658729_0 Belongs to the ompA family - - - 1.059e-288 912.0
PJD3_k127_1658729_1 Polyketide cyclase - - - 0.000000000000000000000000000000000000000000000000000007405 194.0
PJD3_k127_1658729_3 Carbon-nitrogen hydrolase K03820 - - 0.0007427 42.0
PJD3_k127_1664049_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 550.0
PJD3_k127_1664049_1 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007095 509.0
PJD3_k127_1664049_2 Domain of unknown function (DUF4162) K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 327.0
PJD3_k127_1664049_3 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000505 194.0
PJD3_k127_1664049_4 - - - - 0.000000000000000000000000000000000000000000000000001864 185.0
PJD3_k127_1664049_5 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000005326 150.0
PJD3_k127_1664049_6 Divergent 4Fe-4S mono-cluster - - - 0.000000000000000001164 87.0
PJD3_k127_1686460_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 2.155e-220 694.0
PJD3_k127_1686460_1 - - - - 3.169e-212 665.0
PJD3_k127_1686460_2 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 1.593e-203 644.0
PJD3_k127_1686460_3 PFAM Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 517.0
PJD3_k127_1686460_4 S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000009375 225.0
PJD3_k127_1686460_5 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.0000000000000000000000000000000000000000000000008552 178.0
PJD3_k127_1686460_6 guanyl-nucleotide exchange factor activity - - - 0.0000000000000001218 96.0
PJD3_k127_1714956_0 Carbamoyltransferase C-terminus K00612 - - 0.0 1003.0
PJD3_k127_1714956_1 OmpA family - - - 2.025e-288 903.0
PJD3_k127_1714956_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005087 270.0
PJD3_k127_1714956_11 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007807 263.0
PJD3_k127_1714956_12 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000001226 245.0
PJD3_k127_1714956_13 Domain of unknown function (DUF4924) - - - 0.00000000000000000000000000000000000000000000000000000000000001124 220.0
PJD3_k127_1714956_14 Domain of unknown function (DUF1987) - - - 0.00000000000000000000000000000000000000000000000004791 181.0
PJD3_k127_1714956_15 - - - - 0.0000000000000000000000000000000001371 138.0
PJD3_k127_1714956_16 unfolded protein binding K00507,K06142,K13924 - 1.14.19.1,2.1.1.80,3.1.1.61 0.000000000000000000000000000000002563 136.0
PJD3_k127_1714956_17 TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.000000000000000000000000000001248 123.0
PJD3_k127_1714956_18 - - - - 0.00000000000000000000000000006681 118.0
PJD3_k127_1714956_2 FAD linked oxidases, C-terminal domain K00102,K00104 - 1.1.2.4,1.1.3.15 4.549e-201 635.0
PJD3_k127_1714956_20 PFAM BadF BadG BcrA BcrD ATPase family - - - 0.000000000000000000002186 104.0
PJD3_k127_1714956_21 - - - - 0.00000000000000003745 81.0
PJD3_k127_1714956_3 Thiolase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 577.0
PJD3_k127_1714956_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 477.0
PJD3_k127_1714956_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 436.0
PJD3_k127_1714956_6 Hexapeptide repeat of succinyl-transferase K02617,K08279 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 352.0
PJD3_k127_1714956_7 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 351.0
PJD3_k127_1714956_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 322.0
PJD3_k127_1714956_9 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000002411 265.0
PJD3_k127_1727261_0 phosphoribosylamine-glycine ligase activity K01933 - 6.3.3.1 1.689e-212 666.0
PJD3_k127_1727261_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 578.0
PJD3_k127_1727261_2 TIGRFAM Orotidine 5'-phosphate decarboxylase, subfamily 2 K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 448.0
PJD3_k127_1727261_3 PhnA domain K06193 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003095 274.0
PJD3_k127_1727261_4 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000000000000002471 166.0
PJD3_k127_1737992_0 Peptidase family C25 - - - 0.0 1699.0
PJD3_k127_1737992_1 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000002289 192.0
PJD3_k127_176191_0 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III C terminal K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000504 552.0
PJD3_k127_176191_1 Butirosin biosynthesis protein H, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007009 523.0
PJD3_k127_176191_2 Beta-ketoacyl synthase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005427 481.0
PJD3_k127_176191_3 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006642 466.0
PJD3_k127_176191_4 Dialkylrecorsinol condensing enzyme DarA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 339.0
PJD3_k127_176191_5 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007905 287.0
PJD3_k127_176191_6 - - - - 0.0000000000000000000000000000000000000000000000004171 179.0
PJD3_k127_176191_7 Phosphopantetheine attachment site K02078 - - 0.000000000000000000000000000000000001316 139.0
PJD3_k127_176191_8 - - - - 0.000000000000000000000002869 108.0
PJD3_k127_1771004_0 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 396.0
PJD3_k127_1771004_1 S4 RNA-binding domain K06182 - 5.4.99.21 0.000000000000000000000000000000000000000000000000000000000000001159 220.0
PJD3_k127_1771004_2 TIGRFAM single stranded DNA-binding protein (ssb) K03111 - - 0.000000000000000000000000000000000000000373 152.0
PJD3_k127_1771004_3 single-stranded DNA binding K03111 - - 0.000000000000000000000000000000001192 133.0
PJD3_k127_1771004_4 single-stranded DNA-binding protein K03111 - - 0.0000000000000000000000001737 108.0
PJD3_k127_1782787_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 3.868e-206 657.0
PJD3_k127_1782787_1 AcrB/AcrD/AcrF family K07787,K15726 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005931 273.0
PJD3_k127_1782787_2 mercury ion transmembrane transporter activity - - - 0.00000000000000000000000000007311 119.0
PJD3_k127_1782787_3 Phosphoribosyl transferase domain K00948 - 2.7.6.1 0.00000000000394 66.0
PJD3_k127_1782787_4 heavy metal translocating P-type ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0000000005207 63.0
PJD3_k127_1790292_0 translation release factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001044 282.0
PJD3_k127_1790292_1 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.00000000000000000000000000000000000000000000000001539 184.0
PJD3_k127_1790292_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000005904 169.0
PJD3_k127_1800508_0 Aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 1.804e-304 938.0
PJD3_k127_1800508_1 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) K00346 - 1.6.5.8 3.261e-194 614.0
PJD3_k127_1800508_11 SPTR Tetratricopeptide TPR_2 repeat protein - - - 0.000000002994 69.0
PJD3_k127_1800508_2 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 538.0
PJD3_k127_1800508_3 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 330.0
PJD3_k127_1800508_4 PFAM 2Fe-2S iron-sulfur cluster binding domain K02613 - - 0.000000000000000000000000000000000000000000000000000000000000000463 223.0
PJD3_k127_1800508_5 Pfam:DUF59 K02612 - - 0.000000000000000000000000000000000000000000000000000000000004152 211.0
PJD3_k127_1800508_6 Phenylacetic acid degradation B K02610 - - 0.000000000000000000000000000000000000000000008079 165.0
PJD3_k127_1800508_7 ApaG domain K06195 - - 0.0000000000000000000000000000000000000001173 155.0
PJD3_k127_1800508_8 NQR2, RnfD, RnfE family K00347 - 1.6.5.8 0.000000000000000000000000000003885 122.0
PJD3_k127_1800508_9 Belongs to the N-Me-Phe pilin family - - - 0.00000000000000000000000004876 117.0
PJD3_k127_1900433_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.0 1018.0
PJD3_k127_1900433_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 - 1.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 458.0
PJD3_k127_1900433_2 outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 296.0
PJD3_k127_1900433_3 Serine hydrolase (FSH1) - - - 0.00000000000000000000000000000000000000000000009684 175.0
PJD3_k127_192856_0 - - - - 0.0 1135.0
PJD3_k127_192856_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 419.0
PJD3_k127_192856_2 Thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005854 304.0
PJD3_k127_192856_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 0.00000000000001464 77.0
PJD3_k127_194896_0 Sulfatase-modifying factor enzyme 1 - - - 0.0 1042.0
PJD3_k127_194896_1 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 521.0
PJD3_k127_194896_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008329 414.0
PJD3_k127_194896_3 Peptidase family C25 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 315.0
PJD3_k127_1977170_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004856 297.0
PJD3_k127_1977170_1 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000001243 197.0
PJD3_k127_1977170_2 Methylase involved in ubiquinone menaquinone biosynthesis K07755 - 2.1.1.137 0.000006727 48.0
PJD3_k127_1977889_0 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 629.0
PJD3_k127_1977889_1 self proteolysis K04771 - 3.4.21.107 0.0000000000000000000000000000885 136.0
PJD3_k127_1977889_2 PKD domain - - - 0.000000000000000001876 101.0
PJD3_k127_1977889_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000007023 93.0
PJD3_k127_1977889_4 Pappalysin 2 K07762,K08647 GO:0001558,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009987,GO:0016787,GO:0019538,GO:0040008,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0051128,GO:0065007,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.24.79 0.0000000000000009585 93.0
PJD3_k127_1977889_5 C-terminal domain of CHU protein family - - - 0.00000000000001387 86.0
PJD3_k127_1981727_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 8.281e-252 783.0
PJD3_k127_1981727_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 556.0
PJD3_k127_1981727_2 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001522 282.0
PJD3_k127_1981727_3 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000008825 237.0
PJD3_k127_1981727_4 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.00000000000000000000000000000000008283 134.0
PJD3_k127_1996957_0 Conserved repeat domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 398.0
PJD3_k127_1996957_1 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006873 326.0
PJD3_k127_1996957_10 - - - - 0.000124 51.0
PJD3_k127_1996957_2 DNA polymerase III subunit epsilon K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000002697 228.0
PJD3_k127_1996957_3 - - - - 0.000000000000000000000000000000000000000000000000000001058 201.0
PJD3_k127_1996957_4 - - - - 0.000000000000000000000000000000000000000000000000004271 186.0
PJD3_k127_1996957_5 Sporulation protein YtfJ (Spore_YtfJ) - - - 0.00000000000000000000000000000002929 129.0
PJD3_k127_1996957_6 - - - - 0.000000000000000000000000006285 115.0
PJD3_k127_1996957_7 Domain of unknown function (DUF202) K00389 - - 0.00000000000000000000000007695 109.0
PJD3_k127_1996957_8 MerR, DNA binding - - - 0.0000000000000000000002537 102.0
PJD3_k127_1996957_9 - - - - 0.00001698 54.0
PJD3_k127_201089_0 Tetratricopeptide repeat - - - 3.356e-299 947.0
PJD3_k127_201089_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000476 530.0
PJD3_k127_201089_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 450.0
PJD3_k127_201089_3 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009405 351.0
PJD3_k127_201089_4 Glutamine cyclotransferase K00683 - 2.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 348.0
PJD3_k127_201089_5 ATPases associated with a variety of cellular activities K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000328 305.0
PJD3_k127_201089_6 Psort location Cytoplasmic, score 8.96 K08968 - 1.8.4.14 0.000000000000000000000000000000000000000000000000000000000000002235 220.0
PJD3_k127_201089_7 Bacterial Ig-like domain - - - 0.000000000000000000000000000000004298 142.0
PJD3_k127_201089_8 Protein of unknown function (DUF2847) - - - 0.00000000000000000000000000002788 121.0
PJD3_k127_201089_9 - - - - 0.00000000000000000000002427 103.0
PJD3_k127_2016564_0 Belongs to the formate--tetrahydrofolate ligase family K01938 GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.3 6.044e-303 935.0
PJD3_k127_2016564_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 1.934e-194 610.0
PJD3_k127_2016564_10 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 335.0
PJD3_k127_2016564_11 PFAM Cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 332.0
PJD3_k127_2016564_12 SCO1/SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001573 271.0
PJD3_k127_2016564_13 signal sequence binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000002397 241.0
PJD3_k127_2016564_14 PFAM Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000003893 241.0
PJD3_k127_2016564_15 Protein of unknown function (DUF420) K08976 - - 0.0000000000000000000000000000000000000000000000000000004163 198.0
PJD3_k127_2016564_17 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.000000000000000000000000000000000000000000000002402 175.0
PJD3_k127_2016564_19 Protein of unknown function (DUF3098) - - - 0.00000000000000000003531 94.0
PJD3_k127_2016564_2 Heme copper-type cytochrome quinol oxidase subunit 3 K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 496.0
PJD3_k127_2016564_3 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 470.0
PJD3_k127_2016564_4 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 413.0
PJD3_k127_2016564_5 phosphoserine phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000752 387.0
PJD3_k127_2016564_6 FtsX-like permease family K09811 GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 370.0
PJD3_k127_2016564_7 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008526 368.0
PJD3_k127_2016564_8 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005978 347.0
PJD3_k127_2016564_9 PFAM NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 340.0
PJD3_k127_203279_0 Protein conserved in bacteria - - - 0.0 1356.0
PJD3_k127_203279_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 1.098e-229 716.0
PJD3_k127_203279_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 433.0
PJD3_k127_203279_3 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 434.0
PJD3_k127_203279_4 NlpC/P60 family - - - 0.0000000000000000000000000000000005713 136.0
PJD3_k127_203279_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000000003228 122.0
PJD3_k127_2043418_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 1.789e-320 983.0
PJD3_k127_2043418_1 Ribonucleotide reductase, small chain K00526 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 581.0
PJD3_k127_2043418_2 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 312.0
PJD3_k127_2043418_3 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000001128 216.0
PJD3_k127_2043418_4 Phosphoribosyl transferase domain K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000002235 214.0
PJD3_k127_2043418_5 Disulphide isomerase - - - 0.0000000000000000000000000000000000000000000000000000000009266 205.0
PJD3_k127_2043418_6 - - - - 0.000000000000000000005627 96.0
PJD3_k127_2043418_7 Rhodanese Homology Domain - - - 0.00000000000003556 78.0
PJD3_k127_2045274_0 Bacterial DNA polymerase III, alpha subunit K02337 - 2.7.7.7 2.4e-262 818.0
PJD3_k127_2049663_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1291.0
PJD3_k127_2049663_1 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 316.0
PJD3_k127_2049663_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000002584 188.0
PJD3_k127_2054330_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 522.0
PJD3_k127_2054330_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 521.0
PJD3_k127_2054330_2 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 362.0
PJD3_k127_2054330_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000003345 139.0
PJD3_k127_2060097_0 PFAM FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 402.0
PJD3_k127_2060097_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000004917 226.0
PJD3_k127_2060097_2 Protein of unknown function (DUF998) - - - 0.00000000000000000000000000000000000000000000000000000000008032 219.0
PJD3_k127_2060097_3 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.00000000000000000000000000000000000000000000121 169.0
PJD3_k127_2060749_0 PFAM Pregnancy-associated plasma protein-A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006363 397.0
PJD3_k127_2060749_1 PFAM Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001476 294.0
PJD3_k127_2071559_0 Domain of Unknown Function (DUF1259) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005887 469.0
PJD3_k127_2071559_1 Cupin domain - - - 0.0000000000000000000000000000000000001748 141.0
PJD3_k127_2071559_2 Chloramphenicol acetyltransferase K19271 - 2.3.1.28 0.000000000000002751 75.0
PJD3_k127_2072077_0 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 379.0
PJD3_k127_2072077_1 NmrA-like family K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 358.0
PJD3_k127_2072077_2 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 331.0
PJD3_k127_2072077_3 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001979 267.0
PJD3_k127_2072077_4 impB/mucB/samB family K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000008961 175.0
PJD3_k127_2072077_5 - - - - 0.000000000000003225 82.0
PJD3_k127_2072077_6 - - - - 0.000000000000006051 78.0
PJD3_k127_2077563_0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 544.0
PJD3_k127_2077563_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 522.0
PJD3_k127_2077563_10 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000005689 130.0
PJD3_k127_2077563_12 Cell envelope biogenesis protein OmpA - - - 0.0000000000000001262 90.0
PJD3_k127_2077563_13 - - - - 0.000000000004507 72.0
PJD3_k127_2077563_14 - - - - 0.00000002656 59.0
PJD3_k127_2077563_15 - - - - 0.000001699 55.0
PJD3_k127_2077563_2 TIGRFAM gliding motility associated protien GldN - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 439.0
PJD3_k127_2077563_3 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 399.0
PJD3_k127_2077563_4 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001146 284.0
PJD3_k127_2077563_5 Endonuclease Exonuclease Phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001416 246.0
PJD3_k127_2077563_6 Suppressor of fused protein (SUFU) - - - 0.0000000000000000000000000000000000000000000000000002637 191.0
PJD3_k127_2077563_7 - - - - 0.000000000000000000000000000000000000000001626 161.0
PJD3_k127_2077563_8 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000002815 132.0
PJD3_k127_2077563_9 - - - - 0.00000000000000000000000000001315 124.0
PJD3_k127_2080448_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 2.362e-199 633.0
PJD3_k127_2080448_1 KR domain K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 287.0
PJD3_k127_2080448_2 Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002228 276.0
PJD3_k127_2080448_3 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007943 255.0
PJD3_k127_2080448_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000003982 199.0
PJD3_k127_2080448_5 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate - - - 0.00000000000000000000001511 109.0
PJD3_k127_2080448_6 - - - - 0.0000003315 56.0
PJD3_k127_2080448_7 - - - - 0.00001565 51.0
PJD3_k127_2087443_0 Participates in both transcription termination and antitermination K02600 - - 1.652e-231 720.0
PJD3_k127_2087443_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006341 314.0
PJD3_k127_2087443_2 Protein of unknown function (DUF3109) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 286.0
PJD3_k127_2087443_3 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000004059 165.0
PJD3_k127_2089650_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 1.269e-230 719.0
PJD3_k127_2089650_1 DEAD DEAH box helicase K05591 - 3.6.4.13 0.0000000000000000000002082 98.0
PJD3_k127_2115478_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 514.0
PJD3_k127_2115478_1 - - - - 0.000000000000000000000000000000000000000000000000000001766 196.0
PJD3_k127_2115478_2 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000203 139.0
PJD3_k127_2115478_3 Peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.00000000000000000000000007913 113.0
PJD3_k127_2115478_4 TraB family K09973 - - 0.00000000000000001564 85.0
PJD3_k127_2119407_0 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007273 353.0
PJD3_k127_2119407_1 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000002377 229.0
PJD3_k127_2119407_2 repeat protein - - - 0.00000000000000005979 84.0
PJD3_k127_2126695_0 TIGRFAM Na H antiporter NhaC K03315 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 602.0
PJD3_k127_2126695_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 536.0
PJD3_k127_2126695_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0030312,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0040007,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048500,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0071944,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1990904 3.6.5.4 0.00000000000000000000000000000000000002607 145.0
PJD3_k127_2126695_3 mitochondrial translation K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000108 56.0
PJD3_k127_212986_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 368.0
PJD3_k127_212986_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000001076 267.0
PJD3_k127_212986_3 Domain of unknown function (DUF4920) - - - 0.00000000000000000000000005674 113.0
PJD3_k127_2136333_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 5.452e-246 766.0
PJD3_k127_2136333_1 radical SAM domain protein - - - 3.485e-220 696.0
PJD3_k127_2136333_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000005257 218.0
PJD3_k127_2136333_4 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - 0.000000000000000000000000000000000003766 142.0
PJD3_k127_2136333_5 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000000000005087 124.0
PJD3_k127_2151597_0 Predicted membrane protein (DUF2079) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 556.0
PJD3_k127_2151597_1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 548.0
PJD3_k127_2151597_2 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 399.0
PJD3_k127_2151597_3 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 365.0
PJD3_k127_2151597_4 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000006472 191.0
PJD3_k127_2151597_5 WYL domain - - - 0.00000000000000000000000000000000000000000005811 164.0
PJD3_k127_2151597_6 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000001016 163.0
PJD3_k127_2151597_7 PFAM Peptidase family S41 - - - 0.0000000000000002568 92.0
PJD3_k127_2151807_0 TIGRFAM competence protein ComEA helix-hairpin-helix repeat region K06959 - - 0.0 1052.0
PJD3_k127_2151807_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 456.0
PJD3_k127_2151807_10 thiolester hydrolase activity - - - 0.000000000000000000000000000000000000008724 150.0
PJD3_k127_2151807_11 PFAM Divergent AAA domain - - - 0.00000000000000000000000000000000000001302 151.0
PJD3_k127_2151807_12 Sulfotransferase family 2, cytosolic sulfotransferase 1 K01015 - 2.8.2.2 0.000000000000000000000000003123 121.0
PJD3_k127_2151807_13 - - - - 0.0000000000000000000000002176 106.0
PJD3_k127_2151807_14 Rhodanese Homology Domain - - - 0.000000000000000000000005619 106.0
PJD3_k127_2151807_16 Dihaem cytochrome c - - - 0.000000001086 63.0
PJD3_k127_2151807_2 Thiazole biosynthesis protein ThiG K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 439.0
PJD3_k127_2151807_3 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 404.0
PJD3_k127_2151807_4 PFAM Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 323.0
PJD3_k127_2151807_5 Domain of unknown function (DUF368) K08974 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 317.0
PJD3_k127_2151807_6 Outer membrane protein Omp28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 312.0
PJD3_k127_2151807_7 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007063 306.0
PJD3_k127_2151807_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000002599 230.0
PJD3_k127_2151807_9 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000002105 174.0
PJD3_k127_2159273_0 UvrD/REP helicase N-terminal domain - - - 2.184e-210 691.0
PJD3_k127_2159273_1 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 496.0
PJD3_k127_2159273_2 - - - - 0.000000000000000000000000000000000000000000000000000000513 201.0
PJD3_k127_2159273_3 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0000000000000000000004261 95.0
PJD3_k127_2171799_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1058.0
PJD3_k127_2171799_1 COGs COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - 2.563e-252 799.0
PJD3_k127_2171799_2 DHH family K07462 - - 1.856e-197 631.0
PJD3_k127_2171799_3 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 313.0
PJD3_k127_2171799_4 MAM domain, meprin/A5/mu - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001265 316.0
PJD3_k127_2171799_5 WG containing repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003014 263.0
PJD3_k127_2171799_6 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000003417 158.0
PJD3_k127_2171799_7 metallopeptidase activity K01337 - 3.4.21.50 0.00000000000000000000000000000000000000001791 157.0
PJD3_k127_2171799_9 C-terminal domain of CHU protein family - - - 0.00000000000000000000002308 118.0
PJD3_k127_2189817_0 CoA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 581.0
PJD3_k127_2189817_1 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 471.0
PJD3_k127_2189817_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000004501 239.0
PJD3_k127_2189817_3 FAH family - - - 0.000000000000000000000001448 103.0
PJD3_k127_2189817_4 Protein of unknown function (DUF1572) - - - 0.00000000602 57.0
PJD3_k127_2197319_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 2.751e-203 640.0
PJD3_k127_2197319_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 499.0
PJD3_k127_2197319_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000008845 223.0
PJD3_k127_2197319_11 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000003461 215.0
PJD3_k127_2197319_12 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000001467 209.0
PJD3_k127_2197319_13 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000004465 188.0
PJD3_k127_2197319_14 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000006666 173.0
PJD3_k127_2197319_15 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000000000431 169.0
PJD3_k127_2197319_16 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000637 162.0
PJD3_k127_2197319_17 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000001737 150.0
PJD3_k127_2197319_18 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000000000019 145.0
PJD3_k127_2197319_19 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000000000000000008839 142.0
PJD3_k127_2197319_2 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009892 408.0
PJD3_k127_2197319_20 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000007866 138.0
PJD3_k127_2197319_21 TIGRFAM ribosomal protein L30, bacterial organelle K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000012 89.0
PJD3_k127_2197319_22 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000001466 70.0
PJD3_k127_2197319_23 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000004594 71.0
PJD3_k127_2197319_3 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 364.0
PJD3_k127_2197319_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 323.0
PJD3_k127_2197319_5 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 308.0
PJD3_k127_2197319_6 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 297.0
PJD3_k127_2197319_7 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 291.0
PJD3_k127_2197319_8 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001533 266.0
PJD3_k127_2197319_9 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000003812 225.0
PJD3_k127_2200432_0 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 464.0
PJD3_k127_2200432_1 - - - - 0.000000000000000000000000000000000000000000000004079 174.0
PJD3_k127_2200432_2 - - - - 0.00000000000000001228 91.0
PJD3_k127_2200432_3 - - - - 0.0000000000000001839 84.0
PJD3_k127_2200432_4 - - - - 0.0000000000737 66.0
PJD3_k127_2200432_5 Domain of unknown function (DUF5060) - - - 0.000572 52.0
PJD3_k127_2201030_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 - 1.1.1.35 1.565e-228 713.0
PJD3_k127_2201030_1 Thiolase, C-terminal domain K00632 - 2.3.1.16 5.139e-201 631.0
PJD3_k127_2201030_2 DbpA RNA binding domain K05591 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 371.0
PJD3_k127_2204898_0 ABC-2 type transporter - - - 2.21e-243 771.0
PJD3_k127_2204898_1 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 408.0
PJD3_k127_2204898_2 Putative porin - - - 0.0000000000001669 80.0
PJD3_k127_2220965_0 - - - - 0.00000000000000000000000000000000000000000000000000000328 197.0
PJD3_k127_2220965_1 oxidoreductase activity - - - 0.000000000000000000000000000000000008094 156.0
PJD3_k127_2220965_2 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000002393 122.0
PJD3_k127_2220965_3 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000005189 108.0
PJD3_k127_2220965_4 C-terminal domain of CHU protein family - - - 0.00000000005534 76.0
PJD3_k127_2233529_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000471 448.0
PJD3_k127_2233529_1 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000001315 173.0
PJD3_k127_2233529_2 Pseudouridine synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.0000000000000000000005069 97.0
PJD3_k127_2233529_3 Glycosyl hydrolases family 25 K07273 - - 0.000000000000000000001072 98.0
PJD3_k127_2247111_0 HI0933 family K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 595.0
PJD3_k127_2247111_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000003006 172.0
PJD3_k127_2247111_2 Leucine-rich repeat (LRR) protein - - - 0.000000000004679 79.0
PJD3_k127_2247111_4 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.00000294 51.0
PJD3_k127_2247111_5 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0001078 46.0
PJD3_k127_2247541_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 607.0
PJD3_k127_2247541_1 PFAM Alanine dehydrogenase PNT, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 544.0
PJD3_k127_2247541_2 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 530.0
PJD3_k127_2247541_3 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006138 510.0
PJD3_k127_2247541_4 Ribulose-phosphate 3 epimerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005497 419.0
PJD3_k127_2247541_5 TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270,K21749 - 2.7.7.43,2.7.7.92,3.1.3.45 0.0000000000000000000000000000000000000000000000000000000000000000000000002191 253.0
PJD3_k127_2247541_6 alpha beta K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000001961 245.0
PJD3_k127_2247541_7 PFAM Chloroplast import component protein (Tic20) - - - 0.000000000000000000000000003883 113.0
PJD3_k127_2257886_0 Protein of unknown function (DUF3078) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002481 254.0
PJD3_k127_2257886_1 Endonuclease exonuclease phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000004845 207.0
PJD3_k127_227455_0 Bestrophin, RFP-TM, chloride channel K08994 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000753 347.0
PJD3_k127_227455_1 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K19270 - 3.1.3.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 290.0
PJD3_k127_227455_2 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 292.0
PJD3_k127_227455_3 acetyltransferase K03789 - 2.3.1.128 0.000000000000000000000000000000000001561 144.0
PJD3_k127_227455_4 - - - - 0.000000000000000000000000000000001345 134.0
PJD3_k127_227455_5 - - - - 0.00000000000000000000000000000003344 134.0
PJD3_k127_227455_6 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000000008475 96.0
PJD3_k127_227455_7 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000003489 76.0
PJD3_k127_2300225_0 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 1.692e-218 685.0
PJD3_k127_2300225_1 PFAM Alanine dehydrogenase PNT, C-terminal domain K00259 - 1.4.1.1 4.034e-204 640.0
PJD3_k127_2300225_2 Saccharopine dehydrogenase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 557.0
PJD3_k127_2300225_3 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000000000000000005342 158.0
PJD3_k127_2300225_4 Universal stress protein family - - - 0.000000000000000000000000000000000000001723 155.0
PJD3_k127_2300225_5 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.00000000000000000000000000000000000008556 146.0
PJD3_k127_2316592_0 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 494.0
PJD3_k127_2316592_1 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 379.0
PJD3_k127_2316592_2 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 337.0
PJD3_k127_2316592_3 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.0000000000000000000000000000000000000000000000002519 182.0
PJD3_k127_2316592_4 - - - - 0.000000000000000000000000000000000000000188 157.0
PJD3_k127_2316592_5 cytochrome C peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000006697 115.0
PJD3_k127_2316592_6 ATP-independent chaperone mediated protein folding - - - 0.0000001463 59.0
PJD3_k127_2316592_7 bacterial-type flagellum-dependent cell motility - - - 0.0000276 56.0
PJD3_k127_2326491_0 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 286.0
PJD3_k127_2326491_1 AsmA-like C-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006947 280.0
PJD3_k127_2326491_2 - - - - 0.0000000000000000000000000000000000000000000000000000000494 203.0
PJD3_k127_2326491_3 Belongs to the Dps family K04047 - - 0.000000000000000000000000000000000000000000000000000002339 195.0
PJD3_k127_2326491_4 AsmA-like C-terminal region - - - 0.00000000000000000000004717 110.0
PJD3_k127_2326491_5 - - - - 0.0000000000001514 75.0
PJD3_k127_2336534_0 hydroxymethylglutaryl-CoA reductase K00021 - 1.1.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007834 601.0
PJD3_k127_2336534_1 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 456.0
PJD3_k127_2336534_2 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000104 165.0
PJD3_k127_2360557_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 4.126e-270 835.0
PJD3_k127_2360557_1 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000001083 194.0
PJD3_k127_2360557_2 Protein of unknown function (DUF3467) - - - 0.0000000000000000000000000000000000000008278 150.0
PJD3_k127_2360557_3 Predicted membrane protein (DUF2061) - - - 0.000000002533 60.0
PJD3_k127_2365103_0 AMP-binding enzyme K22319 - 6.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006765 533.0
PJD3_k127_2365103_1 PFAM Bacterial trigger factor protein (TF) K03545 - - 0.000000000000000000000000000000000000000000000000004542 183.0
PJD3_k127_2397994_0 heavy metal translocating P-type ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003115 279.0
PJD3_k127_2397994_1 - - - - 0.0000000000000000000000000000000000004429 145.0
PJD3_k127_2397994_2 cytochrome C peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000001004 128.0
PJD3_k127_2450939_0 B12 binding domain K01847 - 5.4.99.2 0.0 1136.0
PJD3_k127_2450939_1 Sulfatase K01138 - - 3.814e-195 628.0
PJD3_k127_2450939_10 High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway K06203 - - 0.00000000000000000000000000000000002539 144.0
PJD3_k127_2450939_11 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.00000000000000000008351 90.0
PJD3_k127_2450939_12 cell cycle K05589,K12065,K13052 - - 0.000000000000000007265 86.0
PJD3_k127_2450939_2 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 455.0
PJD3_k127_2450939_3 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005446 386.0
PJD3_k127_2450939_4 Diacylglycerol kinase catalytic domain (presumed) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 342.0
PJD3_k127_2450939_5 zinc ribbon domain K07164 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008285 319.0
PJD3_k127_2450939_6 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 317.0
PJD3_k127_2450939_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000006023 230.0
PJD3_k127_2450939_8 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000001677 171.0
PJD3_k127_2450939_9 - - - - 0.000000000000000000000000000000000008651 144.0
PJD3_k127_2462797_0 involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 3.624e-266 823.0
PJD3_k127_2462797_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 6.986e-263 814.0
PJD3_k127_2470724_0 ABC-type multidrug transport system ATPase and permease K06147,K11085 - - 2.009e-203 646.0
PJD3_k127_2470724_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000002515 51.0
PJD3_k127_2497910_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 414.0
PJD3_k127_2497910_1 Glycosyltransferase like family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 399.0
PJD3_k127_2497910_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 301.0
PJD3_k127_2497910_3 HWE histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000192 239.0
PJD3_k127_2497910_4 Dehydroquinase class II K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000009004 183.0
PJD3_k127_2497910_5 - - - - 0.00000000000000000000000000000000000004637 145.0
PJD3_k127_2497910_6 - - - - 0.0000003704 53.0
PJD3_k127_2501197_0 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008249 388.0
PJD3_k127_2501197_1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 374.0
PJD3_k127_2501197_2 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579 340.0
PJD3_k127_2501197_3 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 291.0
PJD3_k127_2501197_4 endonuclease containing a URI domain K07461 - - 0.000000000000000000000000000000002509 142.0
PJD3_k127_2509661_0 SMART phosphoesterase PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 407.0
PJD3_k127_2509661_1 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000511 303.0
PJD3_k127_2509661_2 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000006149 201.0
PJD3_k127_2509661_3 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000000000005534 121.0
PJD3_k127_2509661_4 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000000002022 112.0
PJD3_k127_2524303_0 Catalase K03781 - 1.11.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 356.0
PJD3_k127_2524303_1 PFAM Aminotransferase class I and II K00639,K00652 - 2.3.1.29,2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008149 304.0
PJD3_k127_2524303_2 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000121 240.0
PJD3_k127_2524303_3 - - - - 0.00000000000000000000000000000000000000000317 160.0
PJD3_k127_2524303_4 TIGRFAM Rrf2 family protein - - - 0.0000000000000000000000000000000000003731 145.0
PJD3_k127_2524303_5 - - - - 0.000000000000000000000000000001715 125.0
PJD3_k127_2524303_6 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000009713 101.0
PJD3_k127_2524303_7 - - - - 0.0000000005691 63.0
PJD3_k127_2524303_8 - - - - 0.00000008907 55.0
PJD3_k127_2532007_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 3.861e-243 756.0
PJD3_k127_2532007_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 569.0
PJD3_k127_253733_0 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000000106 163.0
PJD3_k127_253733_1 Histidine kinase - - - 0.00000000000000000000000000000000000952 153.0
PJD3_k127_253733_2 - - - - 0.000000000000000000000000000001228 141.0
PJD3_k127_253733_3 Thermolysin metallopeptidase, catalytic domain - - - 0.000000000983 72.0
PJD3_k127_2567411_0 PFAM Cys Met metabolism PLP-dependent enzyme - - - 1.53e-273 847.0
PJD3_k127_258931_0 Pfam:UPF0118 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009962 361.0
PJD3_k127_258931_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 323.0
PJD3_k127_258931_2 - K09004 - - 0.00000000000000000000000000000000000000000000000000000000005903 210.0
PJD3_k127_258931_3 Catalase K03781 - 1.11.1.6 0.0000000000000000105 83.0
PJD3_k127_2624578_0 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005057 597.0
PJD3_k127_2624578_1 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000002555 258.0
PJD3_k127_2624578_2 Peptidase U61, LD-carboxypeptidase A K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000004101 173.0
PJD3_k127_2666516_0 ABC transporter K06158 - - 6.151e-243 762.0
PJD3_k127_2666516_1 TIGRFAM gliding motility-associated protein GldM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009454 440.0
PJD3_k127_2671236_0 SprB repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007473 638.0
PJD3_k127_2671236_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006021 275.0
PJD3_k127_2671236_2 Cytochrome b/b6/petB - - - 0.00000000000000000000000000000000000000000005098 164.0
PJD3_k127_2671236_3 protein CHP03519, membrane, Bacteroidetes - - - 0.0000001058 56.0
PJD3_k127_2673016_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 7.105e-232 722.0
PJD3_k127_2673016_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005978 334.0
PJD3_k127_2673016_2 OstA-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 314.0
PJD3_k127_2673016_3 SIS domain K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 296.0
PJD3_k127_2673016_4 Ferric uptake regulator family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001653 267.0
PJD3_k127_2673016_5 - - - - 0.00000000000000000000000000000000000000000000004114 173.0
PJD3_k127_2673016_6 Tellurite resistance protein TerB - - - 0.000000000000000000000000000000000002938 141.0
PJD3_k127_2673016_7 Domain of unknown function (DUF4249) - - - 0.000000000000003668 80.0
PJD3_k127_2673016_8 antisigma-factor antagonist K04749 - - 0.0001444 49.0
PJD3_k127_2680935_0 DoxX family - - - 1.365e-199 640.0
PJD3_k127_2680935_1 Pyridoxal-phosphate dependent enzyme K01505 - 3.5.99.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 335.0
PJD3_k127_2680935_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 316.0
PJD3_k127_2680935_3 PFAM Ribosomal protein L11 methyltransferase (PrmA) K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 296.0
PJD3_k127_2680935_4 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000214 275.0
PJD3_k127_2680935_5 Domain of Unknown Function (DUF1599) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008326 249.0
PJD3_k127_2680935_6 - - - - 0.00000000000000000000000000000000000000000000000001663 184.0
PJD3_k127_2697022_0 FAD dependent oxidoreductase K15736 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005664 496.0
PJD3_k127_2697022_1 Psort location CytoplasmicMembrane, score 10.00 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 290.0
PJD3_k127_2697022_2 Belongs to the AB hydrolase superfamily. MetX family K00641 - 2.3.1.31 0.00000000000000002189 83.0
PJD3_k127_2700197_0 Lipid A 3-O-deacylase (PagL) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000809 357.0
PJD3_k127_2700197_1 hemolysin activation secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 318.0
PJD3_k127_2700197_2 aspartate kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 291.0
PJD3_k127_2700197_3 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004757 267.0
PJD3_k127_2700197_4 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000001441 252.0
PJD3_k127_2700197_5 - - - - 0.0000000000000000000000000000000000000000000000002129 184.0
PJD3_k127_2700197_6 - - - - 0.000000000000000000000000000000000002432 150.0
PJD3_k127_2700197_7 Phosphoesterase K07095 - - 0.000000000000000000000000000000000005038 139.0
PJD3_k127_2700197_8 - - - - 0.0000000000000000004961 87.0
PJD3_k127_2712954_0 TIGRFAM phenylacetic acid degradation protein paaN K02618 - 1.2.1.91,3.3.2.12 0.0 1085.0
PJD3_k127_2712954_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 549.0
PJD3_k127_2712954_11 - - - - 0.00006325 49.0
PJD3_k127_2712954_2 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007711 533.0
PJD3_k127_2712954_3 PFAM peptidase T2 asparaginase 2 K13051 - 3.4.19.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 392.0
PJD3_k127_2712954_4 - - - - 0.000000000000000000000000000000000000000000000000001777 190.0
PJD3_k127_2712954_5 Kelch repeat type 1 - - - 0.00000000000000000000000000000000000000000000000001093 195.0
PJD3_k127_2712954_6 Peptidase, S8 S53 family - - - 0.000000000000000000000000000000002558 132.0
PJD3_k127_2712954_7 - - - - 0.000000000000000000000000000967 119.0
PJD3_k127_2712954_8 - - - - 0.000000000000000000000000006638 114.0
PJD3_k127_2712954_9 - - - - 0.0000000000001857 79.0
PJD3_k127_2715008_0 Beta-eliminating lyase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 478.0
PJD3_k127_2715008_1 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 291.0
PJD3_k127_2715008_2 Adenylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000312 165.0
PJD3_k127_2715008_3 Protein involved in cellulose biosynthesis - - - 0.00000000000000000000000000000000000000005855 162.0
PJD3_k127_2715008_4 pseudouridylate synthase K06175 - 5.4.99.26 0.00000000000000000000000000000000000001385 145.0
PJD3_k127_2715008_5 KR domain - - - 0.000000000000000000000000204 109.0
PJD3_k127_2718247_0 ABC transporter - - - 5.461e-293 904.0
PJD3_k127_2718247_1 Aromatic amino acid lyase K01745 - 4.3.1.3 2.34e-221 695.0
PJD3_k127_2718247_2 tRNA synthetase class II core domain (G, H, P, S and T) K01892 - 6.1.1.21 3.254e-220 690.0
PJD3_k127_2718247_3 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 518.0
PJD3_k127_2718247_4 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000003917 186.0
PJD3_k127_2720880_0 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 2.742e-228 716.0
PJD3_k127_2720880_1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01464 - 3.5.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 532.0
PJD3_k127_2720880_2 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01464 - 3.5.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008465 285.0
PJD3_k127_2720880_3 Pfam Carbon-nitrogen hydrolase K01431,K12251 - 3.5.1.53,3.5.1.6 0.000000000000000002655 84.0
PJD3_k127_2722172_0 Na+/H+ antiporter family K03315 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 353.0
PJD3_k127_2722172_1 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00826,K02619 - 2.6.1.42,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 304.0
PJD3_k127_2722172_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000008941 184.0
PJD3_k127_2722172_3 Uncharacterized conserved protein (DUF2196) - - - 0.000000000000000000000003942 102.0
PJD3_k127_2735042_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.107e-294 917.0
PJD3_k127_2735042_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 440.0
PJD3_k127_2735042_10 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.0000000000000000000000000000000000000000429 157.0
PJD3_k127_2735042_11 RNA polymerase Rpb6 - - - 0.000000000000000000000000000000000000006895 147.0
PJD3_k127_2735042_2 Lysin motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 381.0
PJD3_k127_2735042_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 373.0
PJD3_k127_2735042_4 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 352.0
PJD3_k127_2735042_5 Domain of unknown function (DUF4835) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 343.0
PJD3_k127_2735042_6 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001666 271.0
PJD3_k127_2735042_7 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002181 259.0
PJD3_k127_2735042_8 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000004683 233.0
PJD3_k127_2735042_9 EamA-like transporter family K15270 - - 0.000000000000000000000000000000000000000000000000006016 186.0
PJD3_k127_2757891_0 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 379.0
PJD3_k127_2757891_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006087 327.0
PJD3_k127_2757891_2 Universal stress protein family - - - 0.0000003065 55.0
PJD3_k127_2784073_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 2.752e-272 848.0
PJD3_k127_2784073_1 OmpA family K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 379.0
PJD3_k127_2784073_2 PFAM Pregnancy-associated plasma protein-A - - - 0.0000000000000000000000000002402 119.0
PJD3_k127_2784073_3 - - - - 0.000000000000000000000009764 109.0
PJD3_k127_2784073_4 - - - - 0.00000000000000001204 89.0
PJD3_k127_2784821_0 ABC transporter, transmembrane region K11085 - - 1.18e-276 860.0
PJD3_k127_2784821_1 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006948 346.0
PJD3_k127_2784821_2 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000008947 183.0
PJD3_k127_2784821_3 Two component regulator propeller - - - 0.0000000000000001019 85.0
PJD3_k127_2785680_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1019.0
PJD3_k127_2785680_1 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00000003092 56.0
PJD3_k127_2785680_2 basal body P-ring K02386 - - 0.0002688 44.0
PJD3_k127_2796695_0 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000001288 183.0
PJD3_k127_2796695_1 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000001122 174.0
PJD3_k127_2796695_2 Protein of unknown function DUF58 - - - 0.000000000001599 67.0
PJD3_k127_2796695_4 Belongs to the peptidase S8 family - - - 0.000005481 56.0
PJD3_k127_2808265_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 434.0
PJD3_k127_2808265_2 Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein. - - - 0.00002998 56.0
PJD3_k127_2808265_3 - - - - 0.00007818 50.0
PJD3_k127_284161_0 Carboxypeptidase - - - 2.123e-194 622.0
PJD3_k127_284161_1 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 499.0
PJD3_k127_284161_10 MobA-like NTP transferase domain - - - 0.00000003593 63.0
PJD3_k127_284161_2 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009354 369.0
PJD3_k127_284161_3 Telomere recombination K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000001461 260.0
PJD3_k127_284161_4 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059,K00216 - 1.1.1.100,1.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000007811 255.0
PJD3_k127_284161_5 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000001458 170.0
PJD3_k127_284161_6 Peptide-N-glycosidase F, C terminal - - - 0.00000000000000000000000000000000000000000004074 169.0
PJD3_k127_284161_7 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000001584 164.0
PJD3_k127_284161_8 Alpha/beta hydrolase family - GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016787,GO:0016822,GO:0016823,GO:0030312,GO:0034820,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044403,GO:0044419,GO:0044464,GO:0051704,GO:0071944 - 0.000000000000000000000000000000000008362 147.0
PJD3_k127_284161_9 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000005438 91.0
PJD3_k127_2854231_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 3.336e-289 893.0
PJD3_k127_2854231_1 PFAM Metallo-beta-lactamase superfamily - - - 2.317e-218 685.0
PJD3_k127_2854231_10 - - - - 0.00000000000004751 74.0
PJD3_k127_2854231_11 heavy metal K08364 - - 0.000000008847 63.0
PJD3_k127_2854231_2 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 324.0
PJD3_k127_2854231_3 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 310.0
PJD3_k127_2854231_4 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002673 315.0
PJD3_k127_2854231_5 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000006267 158.0
PJD3_k127_2854231_6 Sulfurtransferase - - - 0.000000000000000000000007736 103.0
PJD3_k127_2854231_7 microcin C7 resistance K01297 - 3.4.17.13 0.00000000000000000000005389 100.0
PJD3_k127_2854231_8 Zinc metalloprotease (Elastase) - - - 0.0000000000000000007731 102.0
PJD3_k127_2854231_9 Belongs to the peptidase S8 family K12548,K13735 - - 0.000000000000000004058 100.0
PJD3_k127_291618_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1265.0
PJD3_k127_291618_1 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001073 257.0
PJD3_k127_2921950_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 3.218e-195 616.0
PJD3_k127_2921950_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 441.0
PJD3_k127_2921950_2 TIGRFAM Gliding motility-associated ABC transporter ATP-binding subunit GldA K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 420.0
PJD3_k127_2921950_3 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000886 207.0
PJD3_k127_2921950_4 MazG-like family - - - 0.000000000000000000000000000000000000000000001351 166.0
PJD3_k127_2921950_5 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000000000000000009073 121.0
PJD3_k127_2921950_6 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000005406 100.0
PJD3_k127_2921950_7 - - - - 0.00000000000000002986 82.0
PJD3_k127_2921950_8 Lipase (class 3) - - - 0.0000000000001692 72.0
PJD3_k127_2924132_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1280.0
PJD3_k127_2924132_1 Polysaccharide biosynthesis C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006239 593.0
PJD3_k127_2924132_2 Mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008821 411.0
PJD3_k127_2924132_3 Hsp70 protein K04043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 389.0
PJD3_k127_2924132_4 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 352.0
PJD3_k127_2924132_5 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000004212 220.0
PJD3_k127_2924132_6 Heat shock 70 kDa protein K04043 - - 0.00000000003787 63.0
PJD3_k127_294267_0 protein-glutamate methylesterase K00575,K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000001776 229.0
PJD3_k127_294267_1 MORN repeat variant - - - 0.00000000000000000000009624 105.0
PJD3_k127_2944110_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.0 1192.0
PJD3_k127_2944110_1 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278,K18574 - 3.4.14.12,3.4.14.5 1.964e-291 910.0
PJD3_k127_2944110_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007159 544.0
PJD3_k127_2944110_3 PFAM UDP-3-O- 3-hydroxymyristoyl glucosamine N-acyltransferase, LpxD K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 405.0
PJD3_k127_2944110_4 Conserved hypothetical protein (DUF2461) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001198 280.0
PJD3_k127_2944110_5 - - - - 0.0000000000000000000000000000000000000000000004038 171.0
PJD3_k127_2944110_6 Thioesterase superfamily K02614 - - 0.000000000000000000000000000000000001733 143.0
PJD3_k127_2944110_7 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000003271 118.0
PJD3_k127_2951135_0 SurA N-terminal domain K01802,K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 592.0
PJD3_k127_2951135_1 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 424.0
PJD3_k127_2951135_2 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 392.0
PJD3_k127_2951135_3 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 362.0
PJD3_k127_2951135_4 DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006882 325.0
PJD3_k127_2951135_5 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003024 257.0
PJD3_k127_2951135_7 Tfp pilus assembly protein tip-associated adhesin PilY1 K02674 - - 0.000002951 61.0
PJD3_k127_2954131_0 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000002795 181.0
PJD3_k127_2954131_1 Nudix hydrolase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000001355 176.0
PJD3_k127_2954131_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000009754 95.0
PJD3_k127_2954131_3 SnoaL-like polyketide cyclase - - - 0.000000000000005664 80.0
PJD3_k127_2954131_4 - - - - 0.0001034 49.0
PJD3_k127_296774_0 Aldehyde dehydrogenase family K10217 - 1.2.1.32,1.2.1.85 5.257e-261 810.0
PJD3_k127_296774_1 COG0659 Sulfate permease and related - - - 2.168e-242 770.0
PJD3_k127_296774_2 Belongs to the peptidase S1B family K01337 - 3.4.21.50 4.852e-195 629.0
PJD3_k127_296774_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008889 381.0
PJD3_k127_296774_4 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 304.0
PJD3_k127_296774_5 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000003443 223.0
PJD3_k127_296774_8 VanZ like family - - - 0.000000002929 63.0
PJD3_k127_296774_9 Leucine-rich repeat (LRR) protein - - - 0.00006017 53.0
PJD3_k127_2997261_0 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 513.0
PJD3_k127_2997261_2 Glycosyl transferases group 1 K12989 - - 0.00000000000000000000000000000000000000000000000000000002689 211.0
PJD3_k127_2997261_3 Chaperone of endosialidase - - - 0.00000000000000000000005131 114.0
PJD3_k127_3024517_0 PFAM TonB-dependent Receptor Plug Domain K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006444 461.0
PJD3_k127_3024517_1 PFAM nucleic acid binding, OB-fold, tRNA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001116 273.0
PJD3_k127_3033976_0 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 1.85e-217 680.0
PJD3_k127_3033976_1 Y_Y_Y domain - - - 5.957e-209 684.0
PJD3_k127_3033976_2 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 499.0
PJD3_k127_3033976_3 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005953 406.0
PJD3_k127_3033976_4 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 387.0
PJD3_k127_3033976_5 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000005736 158.0
PJD3_k127_3041994_0 C-terminal domain of CHU protein family - - - 9.556e-201 639.0
PJD3_k127_3041994_1 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000894 608.0
PJD3_k127_3041994_2 Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 410.0
PJD3_k127_3041994_3 FMN-dependent dehydrogenase K02371 - 1.3.1.9 0.00000000000000000000000000000000000000000000000000003207 190.0
PJD3_k127_3054578_0 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 297.0
PJD3_k127_3054578_1 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007463 279.0
PJD3_k127_3054578_2 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000004018 143.0
PJD3_k127_3056526_0 Probable RNA and SrmB- binding site of polymerase A K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004782 402.0
PJD3_k127_3064958_0 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007497 500.0
PJD3_k127_3064958_1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 496.0
PJD3_k127_3064958_2 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009527 389.0
PJD3_k127_3064958_3 PHP domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 325.0
PJD3_k127_3064958_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008628 290.0
PJD3_k127_3064958_5 Peptidase M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009263 261.0
PJD3_k127_3064958_6 - - - - 0.0000000000000000000000000000000000000000000003704 171.0
PJD3_k127_3064958_7 DNA mismatch repair protein - - - 0.00000000000000000000000000000000000000000006731 166.0
PJD3_k127_3075295_0 O-Antigen ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 605.0
PJD3_k127_3075295_1 Chain length determinant protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000512 414.0
PJD3_k127_3075295_2 Polysaccharide biosynthesis protein - - - 0.0000000000000009291 84.0
PJD3_k127_3099115_0 TIGRFAM LAO AO transport system ATPase K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 355.0
PJD3_k127_3099115_1 Carbonic anhydrase K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004976 329.0
PJD3_k127_3099115_2 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000789 228.0
PJD3_k127_3099115_3 bacterial OsmY and nodulation domain - - - 0.000000000000000000000000000000000000000000000000000000000000389 218.0
PJD3_k127_3099115_4 - - - - 0.0000000000000000000000000000000000000000000000000000000007357 205.0
PJD3_k127_3099115_5 S4 domain K14761 - - 0.0000000000000004459 80.0
PJD3_k127_3102424_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 2.535e-306 946.0
PJD3_k127_3102424_1 fructose-bisphosphate aldolase K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 565.0
PJD3_k127_3102424_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006132 460.0
PJD3_k127_3102424_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000004357 156.0
PJD3_k127_3121055_0 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 338.0
PJD3_k127_3121055_1 FAD dependent oxidoreductase K15736 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006739 279.0
PJD3_k127_3131633_0 PFAM Carbamoyl-phosphate synthase L chain, ATP binding domain K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 9.499e-243 757.0
PJD3_k127_3131633_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 589.0
PJD3_k127_3131633_2 TamB, inner membrane protein subunit of TAM complex - - - 0.000000000000000000000000000000000000000000000006949 180.0
PJD3_k127_3143491_0 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 451.0
PJD3_k127_3143491_1 Permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 323.0
PJD3_k127_3143491_2 Protein of unknown function (DUF3494) - - - 0.00000000009717 64.0
PJD3_k127_3195686_0 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005897 435.0
PJD3_k127_3195686_1 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 359.0
PJD3_k127_3195686_2 polysaccharide deacetylase - - - 0.000000000000000000000000000000000001199 142.0
PJD3_k127_3195686_3 YceI-like domain - - - 0.00000000000000000000000000001917 133.0
PJD3_k127_3195686_4 small membrane protein - - - 0.0000000000000000000000000008604 116.0
PJD3_k127_3231254_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K13482 - 1.17.1.4 0.0 1045.0
PJD3_k127_3231254_1 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 1.285e-196 625.0
PJD3_k127_3231254_2 PFAM 2Fe-2S -binding K13481 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 496.0
PJD3_k127_3231254_3 MafB19-like deaminase K01487 - 3.5.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000006225 240.0
PJD3_k127_3231254_4 - - - - 0.00000000000000000000000000000000000000000000000000001561 192.0
PJD3_k127_3231254_5 XdhC Rossmann domain K07402 - - 0.000000000000000000000000003458 115.0
PJD3_k127_3243404_0 Uncharacterized protein family (UPF0051) K09014 - - 1.406e-286 883.0
PJD3_k127_3243404_1 ATPases associated with a variety of cellular activities K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 434.0
PJD3_k127_3243404_2 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 427.0
PJD3_k127_3243404_3 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 338.0
PJD3_k127_3243404_4 TIGRFAM Iron-sulfur cluster assembly accessory protein K13628 - - 0.000000000000000000000000000000000000000000000000002044 183.0
PJD3_k127_3243404_5 - - - - 0.00000000000000000000000000003442 123.0
PJD3_k127_3243404_6 Alternative locus ID - - - 0.000000000000000001606 95.0
PJD3_k127_3243404_7 maintenance of epithelial cell apical/basal polarity - - - 0.00000000000004164 79.0
PJD3_k127_3243404_8 Bacterial extracellular solute-binding protein K02012 - - 0.00002784 55.0
PJD3_k127_3246080_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 505.0
PJD3_k127_3246080_1 transcriptional regulator - - - 0.000000000000000000000000000000000000006402 148.0
PJD3_k127_3246080_2 BlaR1 peptidase M56 - - - 0.00000000000000000000000178 115.0
PJD3_k127_3247993_0 - - - - 9.207e-254 804.0
PJD3_k127_3247993_1 UvrD-like helicase C-terminal domain K01144 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 468.0
PJD3_k127_3247993_2 Domain of unknown function (DUF5122) beta-propeller - - - 0.00000002436 63.0
PJD3_k127_3274422_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.305e-261 813.0
PJD3_k127_3274422_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 9.735e-221 694.0
PJD3_k127_3274422_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 375.0
PJD3_k127_3274422_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004885 280.0
PJD3_k127_3274422_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006606 256.0
PJD3_k127_3274422_5 Cytidylyltransferase-like K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000001279 214.0
PJD3_k127_3274422_6 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000000000005463 181.0
PJD3_k127_3274422_7 Starch synthase catalytic domain K00703 - 2.4.1.21 0.00000000000000000000000000000000000000006363 153.0
PJD3_k127_3299037_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0 1109.0
PJD3_k127_3299037_1 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 549.0
PJD3_k127_3299037_2 COG5337 Spore coat assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345 529.0
PJD3_k127_3299037_3 Beta-lactamase class C and other penicillin binding - - - 0.0000000000000000000000000000000000001373 148.0
PJD3_k127_3302790_0 TamB, inner membrane protein subunit of TAM complex - - - 4.551e-256 839.0
PJD3_k127_3302790_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006835 475.0
PJD3_k127_3302790_2 Disulphide bond corrector protein DsbC - - - 0.0000000000000000000000000000000000000001333 155.0
PJD3_k127_3302790_3 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.000000000000000000000002726 108.0
PJD3_k127_3302790_4 - - - - 0.000000000000000000000002863 105.0
PJD3_k127_3307635_0 TIGRFAM ATP-dependent DNA helicase, RecQ family K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 601.0
PJD3_k127_3307635_1 Helix-turn-helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001498 253.0
PJD3_k127_3316334_0 Large extracellular alpha-helical protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000008164 256.0
PJD3_k127_3316334_1 domain, Protein K01337 - 3.4.21.50 0.000000000000000004009 84.0
PJD3_k127_3347570_0 TonB dependent receptor K16087 - - 4.701e-226 721.0
PJD3_k127_3347570_1 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004833 619.0
PJD3_k127_3347570_2 - - - - 0.00000003783 62.0
PJD3_k127_3370053_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 1.304e-264 829.0
PJD3_k127_3370053_1 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005057 488.0
PJD3_k127_3370053_10 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000004085 235.0
PJD3_k127_3370053_11 PFAM von Willebrand factor type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000004153 240.0
PJD3_k127_3370053_12 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000003172 195.0
PJD3_k127_3370053_13 chlorophyll binding - - - 0.00000000000000000000000000000000000000000003116 177.0
PJD3_k127_3370053_14 PFAM von Willebrand factor type A domain K07114 - - 0.0000000000000000000000000000000000008742 141.0
PJD3_k127_3370053_15 repeat protein - - - 0.000000000000000000000000000008425 123.0
PJD3_k127_3370053_16 Tetratricopeptide repeat - - - 0.0000000000000000000000000001626 124.0
PJD3_k127_3370053_17 tetratricopeptide repeat - - - 0.00000000009264 71.0
PJD3_k127_3370053_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 410.0
PJD3_k127_3370053_3 metallopeptidase activity K01337 - 3.4.21.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 431.0
PJD3_k127_3370053_4 Cyclophilin type peptidyl-prolyl cis-trans isomerase CLD K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 391.0
PJD3_k127_3370053_5 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 378.0
PJD3_k127_3370053_6 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 341.0
PJD3_k127_3370053_7 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 312.0
PJD3_k127_3370053_8 CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 307.0
PJD3_k127_3370053_9 Oxygen tolerance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002702 265.0
PJD3_k127_3434123_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 345.0
PJD3_k127_3434123_1 Alpha-2-macroglobulin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000409 243.0
PJD3_k127_3454001_0 pathogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007638 296.0
PJD3_k127_3454001_1 COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) K05770 - - 0.00000000000000000000000000000000000000000000000000000000001223 209.0
PJD3_k127_3454001_2 Ankyrin repeat K06867 - - 0.000000000000000000000000000000000000578 145.0
PJD3_k127_3454001_3 SPTR CHU large protein - - - 0.00000000000000000000000000000002552 143.0
PJD3_k127_3454001_4 - - - - 0.00000000000000000000000003101 108.0
PJD3_k127_3454001_5 YceI-like domain - - - 0.0000000000000003156 92.0
PJD3_k127_3454001_6 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000005771 73.0
PJD3_k127_3454001_7 domain, Protein - - - 0.0000000000006245 81.0
PJD3_k127_3457166_0 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009599 461.0
PJD3_k127_3457166_1 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 305.0
PJD3_k127_3457166_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005583 266.0
PJD3_k127_3457166_3 Gliding motility protein RemB - - - 0.000000000000000000000000000000000000001363 156.0
PJD3_k127_3467876_0 Aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 1.387e-258 803.0
PJD3_k127_3467876_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 589.0
PJD3_k127_3467876_10 Belongs to the ArsC family K00537 - 1.20.4.1 0.0000000000000000000000000000000007615 134.0
PJD3_k127_3467876_11 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000000000001293 122.0
PJD3_k127_3467876_12 - - - - 0.000000000000001748 81.0
PJD3_k127_3467876_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 520.0
PJD3_k127_3467876_3 DeoC/LacD family aldolase K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 493.0
PJD3_k127_3467876_4 PFAM NAD dependent epimerase dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 453.0
PJD3_k127_3467876_5 Belongs to the aldehyde dehydrogenase family K22187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 405.0
PJD3_k127_3467876_6 MORN repeat variant - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 337.0
PJD3_k127_3467876_7 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 325.0
PJD3_k127_3467876_8 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000000005462 203.0
PJD3_k127_3467876_9 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000000000000000000001374 147.0
PJD3_k127_3484974_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 412.0
PJD3_k127_3484974_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009685 399.0
PJD3_k127_3484974_2 Glutathione peroxidase K00432 - 1.11.1.9 0.00000000000000000000001797 100.0
PJD3_k127_3496601_0 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 8.507e-197 619.0
PJD3_k127_3496601_1 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 464.0
PJD3_k127_3496601_2 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000000000000000000000006799 234.0
PJD3_k127_3523526_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1461.0
PJD3_k127_3523526_1 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006131 304.0
PJD3_k127_3523526_2 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000247 194.0
PJD3_k127_3526874_0 PFAM Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000002169 256.0
PJD3_k127_3526874_1 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000000000000151 198.0
PJD3_k127_3526874_2 - - - - 0.0000000000000000000000000000000000000000000000000000004937 208.0
PJD3_k127_3526874_3 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000000000000000001613 177.0
PJD3_k127_3541274_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 1.083e-258 824.0
PJD3_k127_3541274_1 magnesium ion homeostasis K16302 GO:0000003,GO:0000166,GO:0003006,GO:0003674,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006873,GO:0007275,GO:0007548,GO:0007568,GO:0008144,GO:0008150,GO:0008324,GO:0008340,GO:0008406,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010035,GO:0010038,GO:0010259,GO:0010960,GO:0015075,GO:0015077,GO:0015081,GO:0015095,GO:0015318,GO:0015672,GO:0015693,GO:0016020,GO:0016323,GO:0017076,GO:0019725,GO:0022414,GO:0022857,GO:0022890,GO:0030001,GO:0030425,GO:0030554,GO:0031214,GO:0032026,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034220,GO:0034505,GO:0035262,GO:0035639,GO:0035725,GO:0036094,GO:0036477,GO:0040008,GO:0040014,GO:0040018,GO:0040026,GO:0040028,GO:0042221,GO:0042475,GO:0042476,GO:0042592,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043900,GO:0043902,GO:0044297,GO:0044424,GO:0044425,GO:0044459,GO:0044463,GO:0044464,GO:0045137,GO:0045927,GO:0046873,GO:0048513,GO:0048518,GO:0048580,GO:0048582,GO:0048608,GO:0048638,GO:0048639,GO:0048646,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050793,GO:0050801,GO:0050896,GO:0051094,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0055065,GO:0055080,GO:0055082,GO:0055085,GO:0061062,GO:0061063,GO:0061458,GO:0065007,GO:0065008,GO:0070166,GO:0070838,GO:0071944,GO:0072507,GO:0072511,GO:0080154,GO:0097159,GO:0097186,GO:0097367,GO:0097447,GO:0097458,GO:0098590,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0120025,GO:0120038,GO:1901265,GO:1901363,GO:1903830,GO:1905516,GO:2000026,GO:2000241,GO:2000243 - 0.0000000000000000000000000000000000000000000000002618 188.0
PJD3_k127_3541274_2 alpha beta - - - 0.000000000000000000000000000000000000008246 153.0
PJD3_k127_3541274_3 - - - - 0.0000000000000000000000001152 111.0
PJD3_k127_3541274_4 Conserved TM helix - - - 0.00000000000000000007806 98.0
PJD3_k127_3541274_5 - - - - 0.000005769 48.0
PJD3_k127_3583840_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 1.7e-232 725.0
PJD3_k127_3583840_1 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000001369 123.0
PJD3_k127_3583840_2 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate - - - 0.0000000000000000008076 96.0
PJD3_k127_3583840_3 Outer membrane protein beta-barrel domain - - - 0.00000001875 64.0
PJD3_k127_3594348_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 1.358e-205 651.0
PJD3_k127_3594348_1 tryptophanase activity K01667 - 4.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 602.0
PJD3_k127_3594348_2 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 497.0
PJD3_k127_3594348_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 430.0
PJD3_k127_3594348_4 Alanine dehydrogenase/PNT, C-terminal domain K07538 - 1.1.1.368 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 365.0
PJD3_k127_3594348_5 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000005905 263.0
PJD3_k127_3594348_6 Concanavalin A-like lectin/glucanases superfamily - - - 0.000006884 49.0
PJD3_k127_3613806_0 Transporter K02575 - - 3.796e-256 798.0
PJD3_k127_3613806_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 617.0
PJD3_k127_3613806_10 Crp-like helix-turn-helix domain K01420 - - 0.000000000000000000000000000000002211 137.0
PJD3_k127_3613806_11 high affinity nitrate transporter transmembrane protein K02575 - - 0.000000000000000000000003261 103.0
PJD3_k127_3613806_12 Cytochrome oxidase assembly protein K02259 - - 0.00000519 49.0
PJD3_k127_3613806_2 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 499.0
PJD3_k127_3613806_3 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004119 479.0
PJD3_k127_3613806_4 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639,K20967 - 4.1.99.22,4.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 395.0
PJD3_k127_3613806_5 Alginate export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 374.0
PJD3_k127_3613806_6 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000113 259.0
PJD3_k127_3613806_8 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000005928 182.0
PJD3_k127_3613806_9 Cytochrome c - - - 0.000000000000000000000000000000000000000000000009602 176.0
PJD3_k127_3614627_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 3.998e-194 609.0
PJD3_k127_3614627_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 604.0
PJD3_k127_3614627_2 Fumarylacetoacetate (FAA) hydrolase family K01555 - 3.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 412.0
PJD3_k127_3615174_0 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000513 267.0
PJD3_k127_3615174_1 C-terminal domain of CHU protein family - - - 0.000000000000000001272 96.0
PJD3_k127_3624432_0 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 503.0
PJD3_k127_3624432_1 Sortilin, neurotensin receptor 3, - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007188 377.0
PJD3_k127_3624432_2 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009459 311.0
PJD3_k127_3624432_3 Domain of unknown function (DUF4328) - - - 0.00008039 50.0
PJD3_k127_3642273_0 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 543.0
PJD3_k127_3642273_1 membrane protein involved in D-alanine export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007618 517.0
PJD3_k127_3642273_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 391.0
PJD3_k127_3642273_3 Lumazine binding domain K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002374 278.0
PJD3_k127_3642273_5 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.000001045 50.0
PJD3_k127_3656192_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 554.0
PJD3_k127_3656192_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 507.0
PJD3_k127_3656192_2 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity K00134,K00150,K03340 - 1.2.1.12,1.2.1.59,1.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 298.0
PJD3_k127_3656192_3 undecaprenyl-phosphate glucose phosphotransferase activity K19428 - - 0.0000000000000000000000000000000000008248 145.0
PJD3_k127_3656192_4 serine-type aminopeptidase activity - - - 0.0000000000000000000008331 105.0
PJD3_k127_3656192_5 AhpC TSA family - - - 0.0000000000000000000281 96.0
PJD3_k127_3665862_0 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 1.254e-204 655.0
PJD3_k127_3665862_1 TIGRFAM Orotidine 5'-phosphate decarboxylase, subfamily 2 K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000005841 188.0
PJD3_k127_3667972_0 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 425.0
PJD3_k127_3667972_1 PFAM Response regulator receiver domain K07658 - - 0.0000000000000000000000000000000000000000000000000000000000971 207.0
PJD3_k127_3680383_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 6.935e-258 799.0
PJD3_k127_3680383_1 Lysin motif - - - 0.00000000000000000000000000000000000000004658 162.0
PJD3_k127_3680474_0 Domain of Unknown Function (DUF349) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 543.0
PJD3_k127_3680474_1 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 516.0
PJD3_k127_3680474_2 AsmA-like C-terminal region - - - 0.00000000000000000000000000000000000000000000000000001245 198.0
PJD3_k127_3682532_0 Bacterial DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1114.0
PJD3_k127_3682532_1 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 378.0
PJD3_k127_3682532_3 YsiA-like protein, C-terminal region - - - 0.0000000000000000000000000000000000000401 149.0
PJD3_k127_3682532_4 - - - - 0.000000000000000000000000000000002539 134.0
PJD3_k127_3686587_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 2.355e-234 729.0
PJD3_k127_3686587_1 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008722 441.0
PJD3_k127_3686587_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009358 348.0
PJD3_k127_3686587_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 308.0
PJD3_k127_3686587_4 NlpC/P60 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000225 246.0
PJD3_k127_3686587_5 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000257 209.0
PJD3_k127_3686587_6 NAD- dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000006833 174.0
PJD3_k127_3686587_7 Protein of unknown function (DUF721) - - - 0.000000000000000000000000000001201 124.0
PJD3_k127_3686587_9 Tetratricopeptide repeat - - - 0.00000000009229 64.0
PJD3_k127_3696122_0 Glycosyl transferase 4-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 514.0
PJD3_k127_3696122_1 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 470.0
PJD3_k127_3696122_2 HYR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 401.0
PJD3_k127_3696122_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 382.0
PJD3_k127_371682_0 Amidohydrolase family - - - 1.766e-217 685.0
PJD3_k127_371682_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 499.0
PJD3_k127_371682_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 354.0
PJD3_k127_371682_3 - - - - 0.0000000000000000000000000000000001942 143.0
PJD3_k127_37315_0 PFAM O-methyltransferase K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002485 274.0
PJD3_k127_37315_1 PFAM RNA pseudouridylate synthase K06175 - 5.4.99.26 0.0000000000000000000000000000000000000000000000000000000000000000000003479 242.0
PJD3_k127_37315_2 SpoU rRNA Methylase family K00556 - 2.1.1.34 0.000000000000000000000000000000000000000000000000000000000000000000004331 239.0
PJD3_k127_3741112_0 Asparaginase K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 376.0
PJD3_k127_3741112_1 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 333.0
PJD3_k127_3741112_2 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000006715 177.0
PJD3_k127_3741112_3 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000001814 108.0
PJD3_k127_3741112_4 PFAM NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000001331 99.0
PJD3_k127_3751185_0 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006795 373.0
PJD3_k127_3751185_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 329.0
PJD3_k127_3751185_3 Bacterial Ig-like domain - - - 0.00000000004476 70.0
PJD3_k127_3753552_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1137.0
PJD3_k127_3753552_1 2-Nitropropane dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 540.0
PJD3_k127_3753552_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000006001 55.0
PJD3_k127_3755064_0 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 588.0
PJD3_k127_3755064_1 Psort location OuterMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 407.0
PJD3_k127_3755064_3 Predicted membrane protein (DUF2207) - - - 0.000000000000000000000000000000000000000000000000000000000000000002554 241.0
PJD3_k127_3755064_4 domain, Protein - - - 0.0000000004182 68.0
PJD3_k127_377883_0 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) - - - 8.126e-292 903.0
PJD3_k127_377883_1 PFAM Peptidase family M13 K07386 - - 6.74e-250 788.0
PJD3_k127_377883_2 helicase superfamily c-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 562.0
PJD3_k127_377883_3 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006522 548.0
PJD3_k127_377883_4 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 497.0
PJD3_k127_377883_5 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 305.0
PJD3_k127_377883_6 Acetyltransferase (GNAT) domain K02348 - - 0.000000000000000000000000000000000000000000000000000000000000000005317 228.0
PJD3_k127_3781265_0 oligopeptidase that cleaves peptide bonds following arginine and lysine residues K01354 - 3.4.21.83 0.00000000000000000000000000000000000000000000000000000000000000000001176 233.0
PJD3_k127_3781265_1 domain, Protein - - - 0.000000000000000000000000000000000000000002097 168.0
PJD3_k127_3803688_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 503.0
PJD3_k127_3803688_1 OmpA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 399.0
PJD3_k127_3803688_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 314.0
PJD3_k127_3803688_3 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000001532 237.0
PJD3_k127_3803688_4 CoA binding domain K06929 - - 0.000000000000000000000000000000004648 131.0
PJD3_k127_3803688_5 - - - - 0.00000000000000000000000000003864 120.0
PJD3_k127_3803688_6 - - - - 0.00000000000000000000000002717 115.0
PJD3_k127_3803688_7 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000003184 72.0
PJD3_k127_3812314_0 amine dehydrogenase activity - - - 2.984e-198 672.0
PJD3_k127_3812314_1 Lysin motif - - - 0.000000000000000000000000000000000000000000000000000000000000000004115 238.0
PJD3_k127_3812314_2 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000002376 198.0
PJD3_k127_3812314_3 Cleaved Adhesin Domain - - - 0.0000001132 66.0
PJD3_k127_3814787_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 4.451e-215 672.0
PJD3_k127_3814787_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000009678 130.0
PJD3_k127_3816097_0 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 0.0 1099.0
PJD3_k127_3816097_1 PFAM DNA gyrase topoisomerase IV, subunit A K02621 - - 0.0 1084.0
PJD3_k127_3816097_2 PFAM Aspartate ornithine carbamoyltransferase, carbamoyl-P binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005011 552.0
PJD3_k127_3816097_3 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 355.0
PJD3_k127_3816097_4 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006028 360.0
PJD3_k127_3816097_5 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002472 274.0
PJD3_k127_3816097_6 - - - - 0.000000000000000000000000000000000000000003018 161.0
PJD3_k127_3816097_7 Translation initiation factor SUI1 K03113 - - 0.000000000000000000000000000000000000000006647 156.0
PJD3_k127_3816097_8 STAS domain - - - 0.00000000000000000000000000000000002056 138.0
PJD3_k127_3825711_0 Protein of unknown function (DUF2797) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 352.0
PJD3_k127_3825711_1 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 338.0
PJD3_k127_3825711_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 316.0
PJD3_k127_3825711_3 Gliding motility protein, GldB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001372 274.0
PJD3_k127_3825711_4 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000001176 208.0
PJD3_k127_3825711_5 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.0000000000000000000000000000000000000000000000000002604 185.0
PJD3_k127_3825711_6 Gliding motility protein GldC - - - 0.00000000000000000000000000000000000000000000000003684 180.0
PJD3_k127_3825711_7 nitrite reductase [NAD(P)H] activity - - - 0.000000000000000000000000000000000000000000000002407 177.0
PJD3_k127_3825711_8 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000003494 143.0
PJD3_k127_3825711_9 glycosyl transferase family 2 K06158 - - 0.00006222 50.0
PJD3_k127_390061_0 WD40-like Beta Propeller Repeat - - - 1.316e-218 703.0
PJD3_k127_390061_1 PFAM 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00658 - 2.3.1.61 4.943e-199 628.0
PJD3_k127_390061_2 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 604.0
PJD3_k127_390061_3 EXOIII K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003771 319.0
PJD3_k127_390061_4 FAH family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006022 291.0
PJD3_k127_393367_0 Sortilin, neurotensin receptor 3, - - - 6.793e-299 927.0
PJD3_k127_393367_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 362.0
PJD3_k127_393367_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001232 241.0
PJD3_k127_3950103_0 Proprotein convertase P-domain - - - 8.083e-291 942.0
PJD3_k127_3950103_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.337e-229 754.0
PJD3_k127_3950103_2 Phosphoribulokinase / Uridine kinase family K00876 - 2.7.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007313 297.0
PJD3_k127_3950103_3 FG-GAP repeat - - - 0.000000000000000000000000000001194 142.0
PJD3_k127_3950103_6 cellulase activity - - - 0.00000000003603 78.0
PJD3_k127_4079545_0 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 606.0
PJD3_k127_4079545_1 Electron transfer flavoprotein domain K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 404.0
PJD3_k127_4079545_2 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 383.0
PJD3_k127_4079545_3 nucleoside transporter K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009009 329.0
PJD3_k127_4079545_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007203 262.0
PJD3_k127_4079545_5 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006343 250.0
PJD3_k127_4079545_6 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000001573 245.0
PJD3_k127_4079545_7 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0000000000000000000000000000000006295 130.0
PJD3_k127_4085044_0 SprB repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 362.0
PJD3_k127_4085044_1 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000005737 121.0
PJD3_k127_4085044_2 metallopeptidase activity - - - 0.000000000000006969 89.0
PJD3_k127_408995_0 AcrB/AcrD/AcrF family - - - 0.0 1312.0
PJD3_k127_408995_1 Vitamin B12 dependent methionine synthase, activation domain K00548 - 2.1.1.13 0.0 1300.0
PJD3_k127_408995_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 307.0
PJD3_k127_408995_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001333 283.0
PJD3_k127_408995_4 5-methyltetrahydrofolate-dependent methyltransferase activity K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000001191 259.0
PJD3_k127_4106841_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 1.662e-246 764.0
PJD3_k127_4106841_1 involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 526.0
PJD3_k127_4106841_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 292.0
PJD3_k127_4106841_3 Domain of unknown function (DUF4290) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006576 260.0
PJD3_k127_4106841_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000002785 185.0
PJD3_k127_4106841_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000003873 157.0
PJD3_k127_4109482_0 peptidase M1 K01256 - 3.4.11.2 0.0 1177.0
PJD3_k127_4109482_1 Domain of unknown function (DUF5106) - - - 3.274e-198 629.0
PJD3_k127_4109482_10 Protein of unknown function (DUF2795) - - - 0.000000000000000000000000000000000000004729 145.0
PJD3_k127_4109482_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 1.476e-194 621.0
PJD3_k127_4109482_3 Psort location CytoplasmicMembrane, score 10.00 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 518.0
PJD3_k127_4109482_4 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005807 516.0
PJD3_k127_4109482_5 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein K18691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 460.0
PJD3_k127_4109482_6 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 359.0
PJD3_k127_4109482_7 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008528 268.0
PJD3_k127_4109482_8 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000001571 251.0
PJD3_k127_4109482_9 Acyl carrier protein phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000006911 181.0
PJD3_k127_4120326_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.0 1125.0
PJD3_k127_4120326_1 fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000114 205.0
PJD3_k127_4120326_2 OstA-like protein - - - 0.000000000000000000000000000000000000000151 156.0
PJD3_k127_4120897_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 4.058e-200 628.0
PJD3_k127_4120897_1 Predicted permease YjgP/YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 435.0
PJD3_k127_4120897_2 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 368.0
PJD3_k127_4120897_3 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009903 390.0
PJD3_k127_4120897_4 Phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007231 323.0
PJD3_k127_4120897_5 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006187 296.0
PJD3_k127_4120897_6 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000001415 184.0
PJD3_k127_4120897_8 Polymorphic membrane protein, Chlamydia - - - 0.0000007966 63.0
PJD3_k127_4124193_0 PFAM UDP-glucose GDP-mannose dehydrogenase family, NAD binding domain K02474,K13015 - 1.1.1.136 2.868e-236 735.0
PJD3_k127_4124193_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008796 542.0
PJD3_k127_4124193_2 Uncharacterized protein conserved in bacteria (DUF2130) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 487.0
PJD3_k127_4124193_3 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 329.0
PJD3_k127_4124193_4 COG4464 Capsular polysaccharide biosynthesis protein K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000007697 267.0
PJD3_k127_4127704_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 521.0
PJD3_k127_4127704_1 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003732 357.0
PJD3_k127_4127704_2 SPTR Conserved repeat domain protein K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000007509 238.0
PJD3_k127_4131421_0 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 445.0
PJD3_k127_4131421_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 411.0
PJD3_k127_4131421_2 membrane protein involved in D-alanine export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005358 366.0
PJD3_k127_4131421_3 COG0367 Asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000173 232.0
PJD3_k127_4131421_4 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000001296 229.0
PJD3_k127_4131421_5 PFAM Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000001019 198.0
PJD3_k127_4131421_7 lipolytic protein G-D-S-L family - - - 0.00000000004285 74.0
PJD3_k127_415862_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 392.0
PJD3_k127_415862_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007398 338.0
PJD3_k127_415862_2 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 324.0
PJD3_k127_415862_3 PFAM Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.00000000002269 66.0
PJD3_k127_4166136_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 508.0
PJD3_k127_4166136_1 Zn-dependent protease with chaperone function K03799,K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 373.0
PJD3_k127_4166136_2 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002186 281.0
PJD3_k127_416764_0 Pkd domain containing protein K01337 - 3.4.21.50 0.000000000000000000000000000000000000000000000000000023 196.0
PJD3_k127_416764_1 alpha-L-arabinofuranosidase - - - 0.00000000000000000000000000000000000000004232 159.0
PJD3_k127_4169218_0 atp-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000987 290.0
PJD3_k127_4169218_1 redox protein regulator of disulfide bond formation - - - 0.000000000000000000000000000000000000000000000000000000000000001136 221.0
PJD3_k127_4169218_2 N-formylglutamate amidohydrolase - - - 0.00000000000000000000000000000000000000000004111 164.0
PJD3_k127_4169218_3 Protein conserved in bacteria - - - 0.0000000000000000000000664 102.0
PJD3_k127_4183440_0 PFAM Mur ligase family, catalytic domain K01924,K02558 - 6.3.2.45,6.3.2.8 5.84e-220 689.0
PJD3_k127_4183440_1 Tetratricopeptide repeats - - - 2.506e-218 740.0
PJD3_k127_4183440_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000003703 256.0
PJD3_k127_4183440_3 Belongs to the UPF0502 family K09915 - - 0.00000000000000000000000000000000000000000000000000000000000000000007033 235.0
PJD3_k127_4189120_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1093.0
PJD3_k127_4189120_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 482.0
PJD3_k127_4189120_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000004121 222.0
PJD3_k127_4189120_3 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.00001569 47.0
PJD3_k127_4206975_0 C-terminal domain of CHU protein family K01337 - 3.4.21.50 0.0 1275.0
PJD3_k127_4206975_1 C-terminal domain of CHU protein family - - - 4.027e-263 829.0
PJD3_k127_4206975_2 phosphate ion binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009906 303.0
PJD3_k127_4206975_3 DALR_2 K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001968 269.0
PJD3_k127_4214572_0 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 466.0
PJD3_k127_4214572_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 284.0
PJD3_k127_4214572_2 Transcriptional regulatory protein, C terminal K07658 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002149 269.0
PJD3_k127_4214572_3 regulator of competence-specific genes K07343 - - 0.000000000003081 69.0
PJD3_k127_4227475_0 Sortilin, neurotensin receptor 3, - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 553.0
PJD3_k127_4227475_1 PFAM Uncharacterised protein family UPF0118 - - - 0.00000000000000000000000003064 109.0
PJD3_k127_4227475_2 - - - - 0.00000000000000000000001417 116.0
PJD3_k127_4228116_0 PFAM tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 6.263e-251 781.0
PJD3_k127_4228116_1 PFAM Sigma-54 factor, Activator interacting domain (AID) K03092 - - 4.759e-208 657.0
PJD3_k127_4228116_10 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000007117 119.0
PJD3_k127_4228116_11 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000009067 98.0
PJD3_k127_4228116_2 Iron-containing alcohol dehydrogenase K08325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 482.0
PJD3_k127_4228116_3 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 402.0
PJD3_k127_4228116_4 helix_turn _helix lactose operon repressor K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 372.0
PJD3_k127_4228116_5 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004318 350.0
PJD3_k127_4228116_6 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 319.0
PJD3_k127_4228116_7 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007474 287.0
PJD3_k127_4228116_8 Pkd domain containing protein K01337 - 3.4.21.50 0.0000000000000000000000000000000000000000000000000000000000000036 240.0
PJD3_k127_4228116_9 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000000000000000000001438 126.0
PJD3_k127_4264152_0 Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000536 278.0
PJD3_k127_4264152_1 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000006649 242.0
PJD3_k127_4270638_0 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008186 416.0
PJD3_k127_4270638_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 372.0
PJD3_k127_4270638_2 Acyl-CoA reductase (LuxC) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 358.0
PJD3_k127_4270638_3 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003115 220.0
PJD3_k127_4270638_4 heat shock protein binding K03686,K05801,K17867 - - 0.00000000000000000000000000000000000000000000000000000000008102 214.0
PJD3_k127_4270638_5 heat shock protein binding K03686,K05801,K17867 - - 0.0000000000000000000000000000000000000000000001538 178.0
PJD3_k127_4270638_6 SnoaL-like domain - - - 0.000000000146 62.0
PJD3_k127_4279628_0 Domain of unknown function (DUF3552) K18682 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 571.0
PJD3_k127_4279628_1 PFAM NAD dependent epimerase dehydratase family K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 378.0
PJD3_k127_4279628_2 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 377.0
PJD3_k127_4279628_3 Domain of unknown function (DUF3552) K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000001199 234.0
PJD3_k127_4279628_4 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000002546 234.0
PJD3_k127_4279628_5 Glycosyl transferase 4-like - - - 0.0000000000000000000000000000000000000000000000000000000000000007163 231.0
PJD3_k127_4279628_6 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000009698 197.0
PJD3_k127_4279628_7 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000000003725 107.0
PJD3_k127_4279628_8 Peptidase, M23 - - - 0.0000000000000000000003416 99.0
PJD3_k127_4338139_0 COGs COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein K03640 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 299.0
PJD3_k127_4338139_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0003498 50.0
PJD3_k127_4350805_0 Amidohydrolase family - - - 4.458e-211 663.0
PJD3_k127_4350805_1 COGs COG4591 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000377 534.0
PJD3_k127_4350805_10 HutD - - - 0.00000000000000000000000000000000000001778 150.0
PJD3_k127_4350805_11 - - - - 0.0000000000000000000009247 100.0
PJD3_k127_4350805_12 Conserved repeat domain - - - 0.000000001606 71.0
PJD3_k127_4350805_2 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 462.0
PJD3_k127_4350805_3 OmpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005576 380.0
PJD3_k127_4350805_4 N-formylglutamate amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 351.0
PJD3_k127_4350805_5 ATPases associated with a variety of cellular activities K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 342.0
PJD3_k127_4350805_6 RNA pseudouridylate synthase K06175,K06180 - 5.4.99.23,5.4.99.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 300.0
PJD3_k127_4350805_7 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 295.0
PJD3_k127_4350805_8 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001017 295.0
PJD3_k127_4350805_9 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000011 285.0
PJD3_k127_435812_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 4.003e-237 739.0
PJD3_k127_435812_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 436.0
PJD3_k127_435812_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 395.0
PJD3_k127_435812_3 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044 387.0
PJD3_k127_436362_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 569.0
PJD3_k127_436362_1 - - - - 0.0000000000000000000000000000000000000000000000001547 180.0
PJD3_k127_4374194_0 4Fe-4S dicluster domain K00184 - - 0.0 1455.0
PJD3_k127_4374194_1 PFAM Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 0.0 1043.0
PJD3_k127_4374194_10 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000586 199.0
PJD3_k127_4374194_11 O-Antigen ligase - - - 0.00000000000000000000000000000000000000000000002959 183.0
PJD3_k127_4374194_12 - - - - 0.00000000000000000000000000000000000002675 147.0
PJD3_k127_4374194_13 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000000008475 96.0
PJD3_k127_4374194_2 Polysulphide reductase, NrfD K00185 - - 2.355e-294 905.0
PJD3_k127_4374194_3 PDZ domain (Also known as DHR or GLGF) K03797 - 3.4.21.102 9.741e-219 691.0
PJD3_k127_4374194_4 PFAM Class III cytochrome C family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 597.0
PJD3_k127_4374194_5 Quinol cytochrome c oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 589.0
PJD3_k127_4374194_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 554.0
PJD3_k127_4374194_7 Cytochrome C oxidase subunit II, transmembrane domain K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 520.0
PJD3_k127_4374194_8 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005144 289.0
PJD3_k127_4374194_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005855 271.0
PJD3_k127_4436398_0 THUMP K07444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 480.0
PJD3_k127_4436398_1 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 376.0
PJD3_k127_4436398_2 SelR domain K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000005641 250.0
PJD3_k127_4443219_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004512 597.0
PJD3_k127_4443219_1 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 336.0
PJD3_k127_4443219_2 Eukaryotic integral membrane protein (DUF1751) K09650 - 3.4.21.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001149 275.0
PJD3_k127_4443219_3 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006625 256.0
PJD3_k127_4443219_4 PFAM Glycosyl hydrolase family 3 N terminal domain - - - 0.00000000000000000000000000000005125 129.0
PJD3_k127_444452_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006859 518.0
PJD3_k127_444452_1 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008049 358.0
PJD3_k127_4458777_0 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 422.0
PJD3_k127_4458777_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000133 231.0
PJD3_k127_4458777_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000003385 57.0
PJD3_k127_4461825_0 PFAM Penicillin binding protein transpeptidase domain K05366 - 2.4.1.129,3.4.16.4 1.738e-302 948.0
PJD3_k127_4461825_1 Cell cycle protein K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 601.0
PJD3_k127_4461825_2 Coenzyme A transferase K01027,K01028,K01031,K01034 - 2.8.3.5,2.8.3.6,2.8.3.8,2.8.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007587 419.0
PJD3_k127_4461825_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 306.0
PJD3_k127_4487792_0 Domain of unknown function (DUF1732) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 307.0
PJD3_k127_4487792_1 Fungalysin metallopeptidase (M36) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009065 314.0
PJD3_k127_4487792_2 translation release factor activity - - - 0.00000000000000000000000000000000000000000000006222 175.0
PJD3_k127_4487792_3 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.00000000000000000000000000000000000000000005365 161.0
PJD3_k127_4488088_0 HYR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 366.0
PJD3_k127_4488088_1 Pfam:DUF3308 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001204 249.0
PJD3_k127_4488088_2 PFAM NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000001445 215.0
PJD3_k127_4488088_3 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000004316 216.0
PJD3_k127_4488088_4 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000002222 150.0
PJD3_k127_450075_0 PFAM von Willebrand factor type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 601.0
PJD3_k127_450075_1 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006536 578.0
PJD3_k127_450075_10 Galactose-3-O-sulfotransferase - - - 0.00000000000005081 83.0
PJD3_k127_450075_2 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 551.0
PJD3_k127_450075_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008235 389.0
PJD3_k127_450075_4 PFAM Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 302.0
PJD3_k127_450075_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000607 160.0
PJD3_k127_450075_6 SPTR CHU large protein - - - 0.0000000000000000000000000006189 131.0
PJD3_k127_450075_7 Zinc metalloprotease (Elastase) - - - 0.0000000000000000000001482 113.0
PJD3_k127_450075_8 - - - - 0.0000000000000000000001787 103.0
PJD3_k127_450516_0 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 2.972e-234 726.0
PJD3_k127_450516_1 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 5.591e-223 694.0
PJD3_k127_450516_2 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 595.0
PJD3_k127_450516_3 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 470.0
PJD3_k127_450516_4 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000004786 244.0
PJD3_k127_450516_5 PFAM NAD dependent epimerase dehydratase family - - - 0.0000000000000000007781 86.0
PJD3_k127_4510777_0 COGs COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 410.0
PJD3_k127_4510777_1 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 340.0
PJD3_k127_4510777_2 - - - - 0.0000000000000000000000000000000000000000000000001283 184.0
PJD3_k127_4510777_3 membrane - - - 0.0000000000000000000000000000000000000000001083 166.0
PJD3_k127_4510777_4 PFAM ATP-dependent Clp protease adaptor protein ClpS K06891 - - 0.000000000000000000000000000000000186 134.0
PJD3_k127_4510777_5 - - - - 0.00000000001198 65.0
PJD3_k127_4510777_6 YtxH-like protein - - - 0.00000001092 58.0
PJD3_k127_4510777_7 - - - - 0.0005231 44.0
PJD3_k127_4520029_0 COG3210 Large exoproteins involved in heme utilization or adhesion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 374.0
PJD3_k127_4520029_1 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000005263 259.0
PJD3_k127_4520029_2 PFAM Pentapeptide repeats (8 copies) - - - 0.000000000000000000000000000000002594 149.0
PJD3_k127_4531173_0 Peptidase dimerisation domain K01258 - 3.4.11.4 1.446e-200 631.0
PJD3_k127_4531173_1 PFAM Kelch motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 381.0
PJD3_k127_4531173_11 metallopeptidase activity - - - 0.000000000002736 79.0
PJD3_k127_4531173_2 Domain of unknown function (DUF4159) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 354.0
PJD3_k127_4531173_3 PFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 353.0
PJD3_k127_4531173_4 PFAM Kelch motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 330.0
PJD3_k127_4531173_5 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000004285 224.0
PJD3_k127_4531173_6 PFAM Kelch motif - - - 0.00000000000000000000000000000000000000000000000000000004996 210.0
PJD3_k127_4531173_7 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000001638 154.0
PJD3_k127_4531173_8 PKD domain - - - 0.0000000000000000000000000000000007286 148.0
PJD3_k127_4531173_9 Belongs to the universal stress protein A family - - - 0.00000000000000000000004915 109.0
PJD3_k127_4542642_0 Protein of unknown function (DUF2459) - - - 0.00000000000000000000000000000000000000000000000000000000000000001748 230.0
PJD3_k127_4542642_1 Cold shock protein domain - - - 0.0000000000000000000000000000000000000000000000000008347 188.0
PJD3_k127_4542642_2 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000002758 175.0
PJD3_k127_4542642_3 Tellurite resistance protein TehB - - - 0.00000000000000000000000000000000000000002974 159.0
PJD3_k127_4542642_4 chlorophyll binding - - - 0.0000000001389 71.0
PJD3_k127_4542642_5 TIGR02757 family - - - 0.000000000179 61.0
PJD3_k127_4543958_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004154 383.0
PJD3_k127_4543958_1 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007455 379.0
PJD3_k127_4543958_2 Tryptophan halogenase K14257 - 1.14.19.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000888 299.0
PJD3_k127_4543958_3 Peptidyl-prolyl cis-trans isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000002719 248.0
PJD3_k127_4543958_4 Protein of unknown function (DUF1456) - - - 0.00000000000000000000000000000000677 129.0
PJD3_k127_4543958_5 RDD family - - - 0.0000000000000000002402 95.0
PJD3_k127_4543958_6 nuclear chromosome segregation K09892 - - 0.000000000000004507 86.0
PJD3_k127_4543958_7 - - - - 0.0000000009287 70.0
PJD3_k127_4549246_0 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003925 327.0
PJD3_k127_4549246_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000005513 134.0
PJD3_k127_4549246_2 Disaggregatase related repeat - - - 0.0000000000000000000000009062 115.0
PJD3_k127_4549246_3 cytochrome - - - 0.00000000006109 64.0
PJD3_k127_4549246_6 Lipocalin-like domain - - - 0.0009561 48.0
PJD3_k127_4549405_0 cellulase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004104 291.0
PJD3_k127_4549405_1 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000002794 241.0
PJD3_k127_4549405_2 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000003546 202.0
PJD3_k127_45544_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 542.0
PJD3_k127_45544_1 phytoene K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 485.0
PJD3_k127_45544_2 Belongs to the BshC family K22136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 386.0
PJD3_k127_45544_3 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000002211 260.0
PJD3_k127_4578230_0 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004108 258.0
PJD3_k127_4578230_1 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000001223 202.0
PJD3_k127_4578230_2 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000004065 111.0
PJD3_k127_4578230_3 - - - - 0.00000000000007489 79.0
PJD3_k127_4578768_0 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 470.0
PJD3_k127_4578768_1 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000001611 229.0
PJD3_k127_4578768_2 - - - - 0.0000000000000000000000000000000000000000000000000000000009133 208.0
PJD3_k127_4578768_3 nuclear chromosome segregation - - - 0.000000000000000000000000000323 132.0
PJD3_k127_4579317_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 410.0
PJD3_k127_4579317_1 - - - - 0.0000000000000000000000000000000000000000000000000000006469 194.0
PJD3_k127_4601566_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 2.611e-280 878.0
PJD3_k127_4601566_1 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007779 380.0
PJD3_k127_4601566_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 325.0
PJD3_k127_4601566_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 295.0
PJD3_k127_4601566_4 Ferritin-like domain K02217 - 1.16.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000681 237.0
PJD3_k127_4602745_0 FAD-dependent K07137 - - 2.912e-222 700.0
PJD3_k127_4602745_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008165 382.0
PJD3_k127_4602745_2 PFAM Cation transport protein K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 389.0
PJD3_k127_4602745_3 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 322.0
PJD3_k127_4602745_4 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000000000000000000000000414 183.0
PJD3_k127_4619848_0 PFAM Penicillin binding protein transpeptidase domain K05515 - 3.4.16.4 6.464e-282 877.0
PJD3_k127_4619848_1 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 4.951e-200 625.0
PJD3_k127_4619848_2 COGs COG0138 AICAR transformylase IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 399.0
PJD3_k127_4619848_3 Cell cycle protein K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 330.0
PJD3_k127_4619848_4 rod shape-determining protein MreC K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000472 275.0
PJD3_k127_4619848_5 rod shape-determining protein MreD - - - 0.0000000000000000000000000000000000000000000002666 172.0
PJD3_k127_4620854_0 Outer membrane protein Omp28 - - - 0.000000000000000000000000000000000000000000000000000000000002497 219.0
PJD3_k127_4620854_1 heme binding - - - 0.00000000001563 74.0
PJD3_k127_4621622_0 Biotin and Thiamin Synthesis associated domain K03150 - 4.1.99.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 583.0
PJD3_k127_4621622_1 Thiazole biosynthesis protein ThiG K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007962 409.0
PJD3_k127_4621622_2 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005852 368.0
PJD3_k127_4621622_3 Thiamine monophosphate synthase K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000002343 215.0
PJD3_k127_4647085_0 CotH kinase protein - - - 0.0 1265.0
PJD3_k127_4647085_1 Lamin Tail Domain - - - 4.123e-265 837.0
PJD3_k127_4647085_2 protein CHP03519, membrane, Bacteroidetes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 390.0
PJD3_k127_4647085_4 - - - - 0.000000000000003407 78.0
PJD3_k127_4655735_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 541.0
PJD3_k127_4655735_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.0000000000000000000000000000000000000000000005666 169.0
PJD3_k127_4655735_2 NUDIX domain - - - 0.00000000000000000000000000000000000002956 151.0
PJD3_k127_4656606_0 Peptidase family M49 K01277 - 3.4.14.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 506.0
PJD3_k127_4656606_1 Phosphorylase superfamily K01241 - 3.2.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 430.0
PJD3_k127_4656606_10 TPR repeat - - - 0.00000000000000000000000000005536 123.0
PJD3_k127_4656606_13 photosystem II stabilization - - - 0.00002196 47.0
PJD3_k127_4656606_14 - - - - 0.0002089 49.0
PJD3_k127_4656606_2 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 388.0
PJD3_k127_4656606_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 342.0
PJD3_k127_4656606_4 Peptidase family M49 K01277 - 3.4.14.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000592 337.0
PJD3_k127_4656606_5 LysM domain - - - 0.00000000000000000000000000000000000000000000000000001265 196.0
PJD3_k127_4656606_6 SelR domain K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000102 184.0
PJD3_k127_4656606_7 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000837 154.0
PJD3_k127_4656606_8 PFAM Leucine Rich Repeat K19613 - - 0.00000000000000000000000000000000007071 144.0
PJD3_k127_4656606_9 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000905 128.0
PJD3_k127_4661951_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1253.0
PJD3_k127_4661951_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 533.0
PJD3_k127_4661951_2 Sugar nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 436.0
PJD3_k127_4661951_3 Sortilin, neurotensin receptor 3, - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 437.0
PJD3_k127_4661951_4 Phosphoribosyl transferase domain K07100 - - 0.00000000000000000000000000000000000000000000000000001136 194.0
PJD3_k127_4661951_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000001001 109.0
PJD3_k127_4670619_0 Aconitase C-terminal domain K01681 - 4.2.1.3 3.931e-197 618.0
PJD3_k127_4670619_1 COG5337 Spore coat assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 550.0
PJD3_k127_4670619_2 Arylsulfotransferase (ASST) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006714 314.0
PJD3_k127_4670619_3 PFAM Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000009551 192.0
PJD3_k127_4670619_4 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000001041 132.0
PJD3_k127_4670619_5 - - - - 0.0000000003186 66.0
PJD3_k127_4670764_0 Peptidase family M1 domain - - - 0.0 1047.0
PJD3_k127_4670764_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 414.0
PJD3_k127_4670764_2 synthase K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 409.0
PJD3_k127_4670764_3 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 388.0
PJD3_k127_4670764_4 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 332.0
PJD3_k127_4677782_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 431.0
PJD3_k127_4677782_1 Coenzyme A transferase K01029,K01032 - 2.8.3.5,2.8.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 395.0
PJD3_k127_4677782_2 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 304.0
PJD3_k127_4677782_3 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000002731 256.0
PJD3_k127_4677782_4 - - - - 0.00000000000000000000000000000000000000000000002058 177.0
PJD3_k127_4677782_5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000001591 65.0
PJD3_k127_4677782_6 - - - - 0.000000004052 59.0
PJD3_k127_4685469_0 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K01661 - 4.1.3.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 513.0
PJD3_k127_4685469_1 Aminoglycoside 3-N-acetyltransferase K00662 - 2.3.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 300.0
PJD3_k127_4685469_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000003944 235.0
PJD3_k127_4691653_0 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 366.0
PJD3_k127_4691653_1 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000001735 200.0
PJD3_k127_4691653_2 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000003096 197.0
PJD3_k127_470374_0 PFAM TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 585.0
PJD3_k127_470374_2 - - - - 0.0000000000001341 76.0
PJD3_k127_470374_3 SpoU rRNA Methylase family K00556 - 2.1.1.34 0.000006978 48.0
PJD3_k127_4707926_0 MORN repeat variant - - - 4.6e-205 652.0
PJD3_k127_4707926_1 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 428.0
PJD3_k127_4707926_2 PFAM MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001993 257.0
PJD3_k127_4707926_3 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000001532 219.0
PJD3_k127_4707926_4 - - - - 0.00000000000000000000000000000000000000000002709 163.0
PJD3_k127_4710517_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 3.428e-217 682.0
PJD3_k127_4710517_1 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 494.0
PJD3_k127_4710517_2 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 469.0
PJD3_k127_4710517_3 Etoposide-induced protein 2.4 (EI24) K06203 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002074 285.0
PJD3_k127_4710517_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000004103 268.0
PJD3_k127_4710517_5 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000000000009494 166.0
PJD3_k127_4710517_6 - - - - 0.00000000000000000000000000000000000000001395 174.0
PJD3_k127_4710517_7 - - - - 0.00000000000000000000000000000268 137.0
PJD3_k127_4710517_8 domain protein - - - 0.00000000000000002352 96.0
PJD3_k127_4710517_9 - - - - 0.00002591 50.0
PJD3_k127_4714886_0 PFAM TonB-dependent Receptor Plug Domain K02014,K16089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000652 323.0
PJD3_k127_4714886_1 ester cyclase - - - 0.0000000000000000002023 93.0
PJD3_k127_4714886_2 Domain of Unknown Function (DUF748) - - - 0.00000008492 63.0
PJD3_k127_4715619_0 Pyridoxal-phosphate dependent enzyme K01697 - 4.2.1.22 1.471e-231 723.0
PJD3_k127_4715619_1 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005329 319.0
PJD3_k127_4715619_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002574 269.0
PJD3_k127_4715619_3 PFAM periplasmic binding protein - - - 0.00000000000000000000000000000000000000006118 154.0
PJD3_k127_47176_0 GH3 auxin-responsive promoter - - - 3.953e-233 730.0
PJD3_k127_47176_1 GDP-mannose 4,6 dehydratase K03274 - 5.1.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008059 493.0
PJD3_k127_47176_2 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 379.0
PJD3_k127_47176_3 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P) K07094 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 310.0
PJD3_k127_47176_4 Inhibitor of apoptosis-promoting Bax1 K06890 - - 0.0000000000000000000000000000000000000000000000000000000000000000001497 237.0
PJD3_k127_47176_6 Belongs to the P-Pant transferase superfamily - - - 0.000000000000000000000000000000001226 138.0
PJD3_k127_4743904_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 1.742e-291 900.0
PJD3_k127_4743904_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 5.707e-280 865.0
PJD3_k127_4743904_2 M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 425.0
PJD3_k127_4743904_3 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 409.0
PJD3_k127_4743904_4 CorA-like Mg2+ transporter protein K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008244 341.0
PJD3_k127_4743904_5 Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 325.0
PJD3_k127_4743904_6 Uncharacterized protein family UPF0029 - - - 0.00000000000000000000000000000000000000000000000000000009727 201.0
PJD3_k127_4743904_7 TIGRFAM acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.0000000000000000000000000000000000000000000000009368 177.0
PJD3_k127_4752628_0 C-terminal domain of CHU protein family - - - 1.621e-250 791.0
PJD3_k127_4752628_1 TonB-dependent receptor K02014,K16087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003534 423.0
PJD3_k127_4752628_2 OmpA family - - - 0.00000000000000000000000000000000000000000002077 169.0
PJD3_k127_4760962_0 (2R)-phospho-3-sulfolactate synthase (ComA) K08097 - 4.4.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 445.0
PJD3_k127_4760962_1 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 430.0
PJD3_k127_4760962_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003663 268.0
PJD3_k127_4760962_3 PFAM WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000002452 152.0
PJD3_k127_4760962_4 Domain of unknown function (DUF3817) - - - 0.00000000000000000000003144 102.0
PJD3_k127_4779776_0 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000007281 245.0
PJD3_k127_4779776_1 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000001185 222.0
PJD3_k127_4779776_2 D-alanine [D-alanyl carrier protein] ligase activity - - - 0.00000000000000000000000000000000000000000004649 171.0
PJD3_k127_4782158_0 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 407.0
PJD3_k127_4782158_1 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009376 297.0
PJD3_k127_4782158_2 endonuclease I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001164 277.0
PJD3_k127_4782158_3 Thiopurine S-methyltransferase (TPMT) K00569 - 2.1.1.67 0.000000000000000000000000000000000000000000000000000000000000000004823 230.0
PJD3_k127_4782158_4 Ligand-gated channel protein K02014 - - 0.00005153 47.0
PJD3_k127_4782961_0 Domain of unknown function (DUF4143) K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 331.0
PJD3_k127_4782961_1 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 295.0
PJD3_k127_4782961_2 TraB family - - - 0.0000000000000000000000000000001205 132.0
PJD3_k127_4783600_0 SprB repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003767 646.0
PJD3_k127_4783600_1 TIGRFAM Bacteroidetes-specific - - - 0.000000000000000000000000004955 115.0
PJD3_k127_4783600_2 transferase activity, transferring glycosyl groups - - - 0.00000000000008491 87.0
PJD3_k127_4787856_0 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.0 1176.0
PJD3_k127_4787856_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 4.395e-291 897.0
PJD3_k127_4787856_2 ABC-type transport system involved in lipoprotein release permease component K09808,K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 379.0
PJD3_k127_4787856_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 341.0
PJD3_k127_4787856_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000001506 155.0
PJD3_k127_4787856_5 PFAM ATP synthase, Delta Epsilon chain, beta-sandwich domain K02114 - - 0.00000000000000000000000000000008711 126.0
PJD3_k127_4788606_0 ATPase domain of DNA mismatch repair MUTS family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 416.0
PJD3_k127_4788606_1 COG5337 Spore coat assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009438 376.0
PJD3_k127_4788606_2 Protein of unknown function (DUF2490) - - - 0.000000000000000000000000000000365 132.0
PJD3_k127_4793895_0 DegT/DnrJ/EryC1/StrS aminotransferase family K02805 - 2.6.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 602.0
PJD3_k127_4793895_1 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008881 282.0
PJD3_k127_4793895_2 Transporter - - - 0.0000009344 50.0
PJD3_k127_4817908_0 Lon protease (S16) C-terminal proteolytic domain K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 569.0
PJD3_k127_4817908_1 Na+/Pi-cotransporter K03324 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 512.0
PJD3_k127_4817908_2 Phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 485.0
PJD3_k127_4817908_3 leucine binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 419.0
PJD3_k127_4817908_4 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 316.0
PJD3_k127_4817908_5 COG3209 Rhs family protein - - - 0.00000000000000000000000000000000000000000000000205 183.0
PJD3_k127_4821683_0 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046 359.0
PJD3_k127_4821683_1 ATPase family associated with various cellular activities (AAA) K03696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004262 297.0
PJD3_k127_4821683_2 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000006144 147.0
PJD3_k127_4829994_0 Enoyl-CoA hydratase/isomerase K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 397.0
PJD3_k127_4829994_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 394.0
PJD3_k127_4829994_2 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 311.0
PJD3_k127_4829994_3 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003346 244.0
PJD3_k127_4829994_4 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000002219 204.0
PJD3_k127_4829994_5 RNA-binding protein - - - 0.00000000000000000000000000000006207 126.0
PJD3_k127_4829994_6 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0003855 43.0
PJD3_k127_4833707_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1054.0
PJD3_k127_4833707_1 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 315.0
PJD3_k127_4833707_2 COG5337 Spore coat assembly protein - - - 0.0000000000000000000000000000000000000000000000008168 180.0
PJD3_k127_4835499_0 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 2.65e-241 747.0
PJD3_k127_4835499_1 PFAM PKD domain - - - 0.0000000000000000000000001781 122.0
PJD3_k127_4842066_0 C-terminal domain of CHU protein family - - - 9.172e-260 823.0
PJD3_k127_4842066_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 394.0
PJD3_k127_4842066_2 domain, Protein K03570,K11904,K12132,K21471 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 335.0
PJD3_k127_4842066_3 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000004579 257.0
PJD3_k127_4842066_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000001113 161.0
PJD3_k127_4854154_0 Peptidase, S8 S53 family - - - 5.034e-223 707.0
PJD3_k127_4854154_1 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000003908 134.0
PJD3_k127_4854154_2 PFAM SMP-30 Gluconolaconase - - - 0.000000000006206 79.0
PJD3_k127_4854154_3 Leucine-rich repeat (LRR) protein - - - 0.000002908 60.0
PJD3_k127_4864155_0 nuclear chromosome segregation - - - 1.108e-318 1009.0
PJD3_k127_4864155_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 4.017e-312 964.0
PJD3_k127_4864155_2 GcpE protein K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 2.431e-250 787.0
PJD3_k127_4864155_3 PFAM Fatty acid desaturase K00508 - 1.14.19.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 405.0
PJD3_k127_4864155_4 YjbR - - - 0.00000000000000000000000000000000000000000008414 162.0
PJD3_k127_4864155_5 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.0000000000000000000000000000000000000001148 154.0
PJD3_k127_4864155_6 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.0000000000000000000000000000000000004575 144.0
PJD3_k127_4864155_7 Ribosome-associated heat shock protein implicated in K04762 - - 0.0000000000000000000000000007977 115.0
PJD3_k127_4874662_0 TIGRFAM DNA topoisomerase III, bacteria and conjugative plasmid K03169 - 5.99.1.2 0.0 1032.0
PJD3_k127_4874662_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 466.0
PJD3_k127_4874662_2 Bacterial capsule synthesis protein K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005923 313.0
PJD3_k127_4874662_3 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000001394 236.0
PJD3_k127_4874662_4 - - - - 0.00000000000000000000000000000000000000000000000000000005489 204.0
PJD3_k127_4883244_0 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 586.0
PJD3_k127_4883244_1 SpoU rRNA Methylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001607 263.0
PJD3_k127_4883244_2 GHKL domain K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000007229 231.0
PJD3_k127_4883244_3 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000001365 190.0
PJD3_k127_4883244_4 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000001971 132.0
PJD3_k127_4884586_0 Sugar (and other) transporter - - - 1.852e-194 614.0
PJD3_k127_4884586_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 463.0
PJD3_k127_4884586_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 389.0
PJD3_k127_4884586_3 alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 340.0
PJD3_k127_4884586_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000008925 188.0
PJD3_k127_4884586_5 Sporulation related domain - - - 0.00000000000000000000000000000000000000000000001542 188.0
PJD3_k127_4884586_6 transcriptional regulator K04761 - - 0.0000000000000000001623 91.0
PJD3_k127_4884586_7 OmpA family - - - 0.0000001217 55.0
PJD3_k127_488525_0 RQC K03654 - 3.6.4.12 0.0 1150.0
PJD3_k127_488525_1 CarboxypepD_reg-like domain - - - 0.0 1067.0
PJD3_k127_488525_2 PFAM Peptidase family M20 M25 M40 K01451 - 3.5.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009861 559.0
PJD3_k127_488525_3 ABC-type (Unclassified) transport system, ATPase component K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 398.0
PJD3_k127_488525_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 358.0
PJD3_k127_488525_5 Protein of unknown function (DUF4230) - - - 0.00000000000000000000000000000000000000000000005427 175.0
PJD3_k127_488525_7 membrane transporter protein K07090 - - 0.000000000000000000000000000124 119.0
PJD3_k127_4885397_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009405 548.0
PJD3_k127_4885397_1 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008494 433.0
PJD3_k127_4885397_2 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 370.0
PJD3_k127_4885397_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001782 269.0
PJD3_k127_4885397_4 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000006742 231.0
PJD3_k127_4885397_5 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000003274 176.0
PJD3_k127_4889633_0 AcrB/AcrD/AcrF family K07787,K15726 - - 0.0 1712.0
PJD3_k127_4889633_1 - - - - 0.0000000000401 68.0
PJD3_k127_4895915_0 Ribonuclease E/G family K08301 - - 4.826e-266 826.0
PJD3_k127_4895915_1 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000808 480.0
PJD3_k127_4895915_2 A G-specific adenine glycosylase K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004968 359.0
PJD3_k127_4895915_3 TIGRFAM single stranded DNA-binding protein (ssb) K03111 - - 0.0000000000000000000000000000000000000000000000000008666 186.0
PJD3_k127_4895915_4 bacterial (prokaryotic) histone like domain K03530 - - 0.0000000000000000000000000000000000000000003579 159.0
PJD3_k127_4895915_5 gliding motility protein GldD - - - 0.0000000000000000000000000000000003042 136.0
PJD3_k127_4895915_6 RecX family K03565 - - 0.000000000000000000000000000000005319 131.0
PJD3_k127_4923659_0 Arginyl tRNA synthetase N terminal domain K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 7.933e-290 901.0
PJD3_k127_4923659_1 OmpA family - - - 1.371e-259 815.0
PJD3_k127_4923659_10 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000001424 220.0
PJD3_k127_4923659_2 Ftsk_gamma K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 533.0
PJD3_k127_4923659_3 Ftsk_gamma K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 441.0
PJD3_k127_4923659_4 Domain of unknown function (DUF389) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 421.0
PJD3_k127_4923659_5 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 400.0
PJD3_k127_4923659_6 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008699 389.0
PJD3_k127_4923659_7 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000721 336.0
PJD3_k127_4923659_8 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002091 287.0
PJD3_k127_4923659_9 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006826 275.0
PJD3_k127_4932032_0 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01920 - 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 437.0
PJD3_k127_4932032_1 Esterase PHB depolymerase K03932 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 397.0
PJD3_k127_4932032_2 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 385.0
PJD3_k127_4932032_3 peptidase S9 prolyl oligopeptidase active site domain protein - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000001592 147.0
PJD3_k127_493234_0 PFAM Aminotransferase class I and II K00639 - 2.3.1.29 5.444e-222 693.0
PJD3_k127_493234_1 MgtC family K07507 - - 0.000000000000000000000000000000000000000000005395 167.0
PJD3_k127_493234_2 - - - - 0.0000000000000000000000000000000000002964 143.0
PJD3_k127_4935581_0 Monomeric isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1094.0
PJD3_k127_4935581_1 cell redox homeostasis K12057 - - 0.00000000000000000000000000000000000174 145.0
PJD3_k127_4935581_2 Glycosyl transferase family 2 K20534 - - 0.0000000000000000000000000000002241 126.0
PJD3_k127_4941618_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 1.985e-229 720.0
PJD3_k127_4941873_0 PFAM PKD domain - - - 0.0 1269.0
PJD3_k127_4941873_1 Cys/Met metabolism PLP-dependent enzyme K04127 - 5.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000483 507.0
PJD3_k127_4941873_2 - - - - 0.0000000000000000000000000000000000000000000002661 175.0
PJD3_k127_4941873_3 Protein of unknown function (DUF1572) - - - 0.0000000000000000000000000000000000000000003121 162.0
PJD3_k127_4941873_4 - - - - 0.000000134 56.0
PJD3_k127_4945212_0 Chain length determinant protein - - - 2.659e-266 842.0
PJD3_k127_4945212_1 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000002853 235.0
PJD3_k127_4945212_2 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000001754 227.0
PJD3_k127_4950976_0 Belongs to the DEAD box helicase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 428.0
PJD3_k127_4950976_1 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000007028 221.0
PJD3_k127_4950976_2 Outer membrane protein beta-barrel domain - - - 0.000000671 59.0
PJD3_k127_4964065_0 Pyrimidine nucleoside phosphorylase C-terminal domain K00756,K00758 - 2.4.2.2,2.4.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 556.0
PJD3_k127_4964065_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 458.0
PJD3_k127_4973696_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 4.969e-265 827.0
PJD3_k127_4973696_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 5.037e-220 691.0
PJD3_k127_4973696_2 PFAM Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 584.0
PJD3_k127_4973696_3 Lipopolysaccharide-assembly - - - 0.00000000000000000000000000000000000000002063 158.0
PJD3_k127_4973696_4 - - - - 0.0000000006492 69.0
PJD3_k127_5004699_0 C-type lectin (CTL) or carbohydrate-recognition domain (CRD) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006285 267.0
PJD3_k127_5004699_1 Fibronectin type 3 domain - - - 0.0000288 53.0
PJD3_k127_5010053_0 Motility related/secretion protein - - - 0.0 3241.0
PJD3_k127_5010053_1 Malic enzyme, NAD binding domain K00027,K00029 - 1.1.1.38,1.1.1.40 0.0 1222.0
PJD3_k127_5010053_2 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 405.0
PJD3_k127_5010053_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 297.0
PJD3_k127_5010053_4 cell redox homeostasis K21636 - 1.1.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 312.0
PJD3_k127_5010053_5 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009804 292.0
PJD3_k127_5010053_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002821 274.0
PJD3_k127_5010053_7 Acetyltransferase (GNAT) domain K00657 - 2.3.1.57 0.0000000000000000000000000000000000000000000008493 169.0
PJD3_k127_5015598_0 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 576.0
PJD3_k127_5015598_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 332.0
PJD3_k127_5015598_2 ABC-type uncharacterized transport system K01992 - - 0.000000000000000003478 86.0
PJD3_k127_5032709_0 TonB-dependent receptor K16089 - - 1.046e-314 979.0
PJD3_k127_5032709_1 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007819 260.0
PJD3_k127_5032709_2 D-ala-D-ala dipeptidase K08641 - 3.4.13.22 0.00000000000000000000000000000000000000000000000000000000000000000000001179 250.0
PJD3_k127_5032709_3 acetyltransferase - - - 0.00000000000000000000000000000000000000000000006644 173.0
PJD3_k127_5032709_4 Carboxylesterase family - - - 0.00000000000000000000000000000000008553 140.0
PJD3_k127_5032709_6 Thioredoxin-like domain - - - 0.00000000001109 71.0
PJD3_k127_5032709_7 Protein conserved in bacteria K07011 - - 0.0000000001335 64.0
PJD3_k127_5032709_8 Pregnancy-associated plasma protein-A - - - 0.000007631 57.0
PJD3_k127_50341_0 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 7.418e-270 847.0
PJD3_k127_50341_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 9.318e-212 663.0
PJD3_k127_50341_10 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000002411 162.0
PJD3_k127_50341_11 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000000000000509 147.0
PJD3_k127_50341_12 - - - - 0.000000000000000000000000004718 115.0
PJD3_k127_50341_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 4.032e-205 646.0
PJD3_k127_50341_3 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 6.56e-197 624.0
PJD3_k127_50341_4 tRNA synthetase class II core domain (G, H, P, S and T) K01875 - 6.1.1.11 1.695e-194 614.0
PJD3_k127_50341_5 Cell cycle protein K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 508.0
PJD3_k127_50341_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 424.0
PJD3_k127_50341_7 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008618 409.0
PJD3_k127_50341_8 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001833 252.0
PJD3_k127_50341_9 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000000000000000000001686 166.0
PJD3_k127_5039439_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1259.0
PJD3_k127_5039439_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005049 571.0
PJD3_k127_5039439_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 465.0
PJD3_k127_5039439_3 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005399 359.0
PJD3_k127_5039439_4 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009809 300.0
PJD3_k127_5039439_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001927 263.0
PJD3_k127_5039439_6 Sodium:dicarboxylate symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000126 255.0
PJD3_k127_5039439_7 Esterase PHB depolymerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002032 256.0
PJD3_k127_5063245_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005289 416.0
PJD3_k127_5063245_1 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000004205 130.0
PJD3_k127_5075887_0 Peptidase, M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 327.0
PJD3_k127_5075887_1 PFAM PKD domain - - - 0.0001727 45.0
PJD3_k127_5077978_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000673 476.0
PJD3_k127_5077978_1 protein deglycation K03152,K05520,K12132 - 2.7.11.1,3.5.1.124 0.00000000000000000000000000000000000000001536 158.0
PJD3_k127_5077978_2 metallopeptidase activity K01337 - 3.4.21.50 0.000000000000000000000000002148 128.0
PJD3_k127_5096740_0 Peptidase S46 - - - 1.962e-276 867.0
PJD3_k127_5096740_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 3.701e-243 757.0
PJD3_k127_5096740_2 - - - - 0.000000000000000000000000000000003391 137.0
PJD3_k127_5096740_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000005046 123.0
PJD3_k127_5096740_4 PFAM Pregnancy-associated plasma protein-A - - - 0.000000001656 63.0
PJD3_k127_5108237_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 562.0
PJD3_k127_5130413_0 Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008169 431.0
PJD3_k127_5130413_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003535 364.0
PJD3_k127_5130413_2 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000003698 138.0
PJD3_k127_5130413_3 SPTR Conserved repeat domain protein - - - 0.000000000000000000000000000000000921 131.0
PJD3_k127_5130413_4 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000001421 133.0
PJD3_k127_5131586_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 2.103e-224 704.0
PJD3_k127_5131586_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 477.0
PJD3_k127_5131586_10 Domain of unknown function (DUF4956) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 308.0
PJD3_k127_5131586_11 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000259 267.0
PJD3_k127_5131586_12 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000713 263.0
PJD3_k127_5131586_13 VTC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002323 252.0
PJD3_k127_5131586_14 - - - - 0.0000000000002958 74.0
PJD3_k127_5131586_2 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K13019 - 5.1.3.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 479.0
PJD3_k127_5131586_3 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003419 448.0
PJD3_k127_5131586_4 Glycosyl hydrolase family 3 N terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 402.0
PJD3_k127_5131586_5 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 375.0
PJD3_k127_5131586_6 Glutathione peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 377.0
PJD3_k127_5131586_7 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 372.0
PJD3_k127_5131586_8 membrane-bound metal-dependent hydrolase (DUF457) K07038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 366.0
PJD3_k127_5131586_9 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008549 348.0
PJD3_k127_5136441_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 3.562e-202 637.0
PJD3_k127_5136441_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 494.0
PJD3_k127_5136441_2 PFAM Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006319 436.0
PJD3_k127_5136441_3 TIGRFAM competence damage-inducible protein CinA N-terminal domain K03742,K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 412.0
PJD3_k127_5136441_4 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000001503 136.0
PJD3_k127_5136441_5 Ribosomal protein L33 K02913 - - 0.0000000000000000000000000000355 116.0
PJD3_k127_5136441_6 Domain of unknown function (DUF4295) - - - 0.00000000000000005706 81.0
PJD3_k127_5143925_0 membrane - - - 1.57e-222 718.0
PJD3_k127_5143925_1 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001791 260.0
PJD3_k127_5143925_2 Thioredoxin-like - - - 0.00000000000000000007866 91.0
PJD3_k127_51615_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 0.0 1071.0
PJD3_k127_51615_1 Transporter K02429 - - 1.274e-233 734.0
PJD3_k127_51615_2 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 3.068e-197 634.0
PJD3_k127_51615_3 Amino acid kinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 552.0
PJD3_k127_51615_4 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 369.0
PJD3_k127_51615_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007338 376.0
PJD3_k127_51615_6 TIGRFAM C-terminal peptidase (prc) K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 364.0
PJD3_k127_51615_7 Fungalysin metallopeptidase (M36) K01417 - - 0.00000000000000000002658 104.0
PJD3_k127_51615_8 iron ion homeostasis K03709,K03711,K04758,K04759 GO:0000041,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0015684,GO:0030001,GO:0033554,GO:0034220,GO:0034755,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070627,GO:0070838,GO:0072511,GO:0097286,GO:0098655,GO:0098657,GO:0098659,GO:0098660,GO:0098662,GO:0098707,GO:0098711,GO:0098739,GO:0099587,GO:1903874 - 0.000000000001428 70.0
PJD3_k127_5183305_0 Peptide-N-glycosidase F, C terminal - - - 4.085e-262 828.0
PJD3_k127_5192937_0 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009057 334.0
PJD3_k127_5192937_1 OmpA family K03640 - - 0.00000000000000000000002661 106.0
PJD3_k127_5192937_2 C-terminal domain of CHU protein family - - - 0.000000000000000000000282 98.0
PJD3_k127_5209545_0 benzoyl-CoA reductase K04113 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007292 557.0
PJD3_k127_5209545_1 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 378.0
PJD3_k127_5209545_2 Benzoyl-CoA reductase subunit K04114 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 376.0
PJD3_k127_5209545_3 Benzoyl-CoA reductase subunit K04115 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001002 281.0
PJD3_k127_5209545_4 polyketide synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009739 267.0
PJD3_k127_5209545_5 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000000000002173 200.0
PJD3_k127_5213108_0 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009361 377.0
PJD3_k127_5213108_1 Outer membrane protein beta-barrel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 332.0
PJD3_k127_5213108_2 Endonuclease Exonuclease Phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 295.0
PJD3_k127_5213108_3 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001822 264.0
PJD3_k127_5213108_4 Outer membrane protein beta-barrel family - - - 0.00000000000000000000000000000000000000000000000000000000002048 211.0
PJD3_k127_5213108_5 Nuclease, EndA NucM family - - - 0.000000000000000000000000000000000000000000000000000000006153 218.0
PJD3_k127_5213108_7 PFAM Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain - - - 0.000000000000000000000000005266 117.0
PJD3_k127_5213108_8 Belongs to the ompA family - - - 0.0000000006098 69.0
PJD3_k127_5230930_0 C-terminal domain of CHU protein family - - - 1.864e-281 891.0
PJD3_k127_5230930_1 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 491.0
PJD3_k127_5230930_2 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 444.0
PJD3_k127_5230930_3 Cytochrome oxidase assembly protein K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 389.0
PJD3_k127_5230930_4 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 299.0
PJD3_k127_5230930_5 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 291.0
PJD3_k127_5230930_6 COG0451 Nucleoside-diphosphate-sugar - - - 0.00000000000000000000000000000000000000000001242 172.0
PJD3_k127_5243015_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.0 1249.0
PJD3_k127_5243015_1 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000008272 158.0
PJD3_k127_5243015_2 Sulfatase - - - 0.00000000000000000000000000000000000001474 149.0
PJD3_k127_5243015_3 Thioredoxin K03671 - - 0.000000000000000000000000000000001427 132.0
PJD3_k127_5247309_0 Hsp90 protein K04079 - - 5.391e-319 985.0
PJD3_k127_5247309_1 Methyltransferase K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 308.0
PJD3_k127_5247309_2 Tellurite resistance protein TerB K05801 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007025 280.0
PJD3_k127_5247309_3 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000001407 177.0
PJD3_k127_5247309_4 - - - - 0.000000000000000000000000000000001159 138.0
PJD3_k127_524819_0 Large family of predicted nucleotide-binding domains K07175 - - 7.12e-217 679.0
PJD3_k127_524819_10 O-Antigen ligase - - - 0.00000000000000000000000000000000000000000003231 172.0
PJD3_k127_524819_11 Acetyltransferase (GNAT) domain K00657 - 2.3.1.57 0.000000000003352 66.0
PJD3_k127_524819_2 MgtE intracellular N domain K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 607.0
PJD3_k127_524819_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005198 418.0
PJD3_k127_524819_4 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 417.0
PJD3_k127_524819_5 S-adenosylmethionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007538 405.0
PJD3_k127_524819_7 Endoribonuclease L-PSP K15067 - 3.5.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002828 269.0
PJD3_k127_524819_8 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000005487 224.0
PJD3_k127_524819_9 - - - - 0.0000000000000000000000000000000000000000000000539 177.0
PJD3_k127_5251966_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 1.396e-206 647.0
PJD3_k127_5251966_1 DNA polymerase III subunits gamma and tau domain III K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 507.0
PJD3_k127_5251966_10 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000005114 78.0
PJD3_k127_5251966_11 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0002914 54.0
PJD3_k127_5251966_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 413.0
PJD3_k127_5251966_3 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006973 391.0
PJD3_k127_5251966_4 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 392.0
PJD3_k127_5251966_5 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000001201 208.0
PJD3_k127_5251966_6 Glycosyltransferase family 28 C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000005767 201.0
PJD3_k127_5251966_7 - - - - 0.0000000000000000000000000000000001304 141.0
PJD3_k127_5251966_8 PFAM Two component regulator propeller - - - 0.00000000000000000000000000004425 132.0
PJD3_k127_5251966_9 Fungalysin/Thermolysin Propeptide Motif K01400 - 3.4.24.28 0.00000000000000000000000001003 127.0
PJD3_k127_5271119_0 SprB repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 411.0
PJD3_k127_5271119_1 Contains one ATP-binding region, ATPase-like domain (IPR003594) - - - 0.00000006339 61.0
PJD3_k127_5271119_2 Thermolysin metallopeptidase, alpha-helical domain K01400 - 3.4.24.28 0.00000105 63.0
PJD3_k127_5271781_0 Aldehyde dehydrogenase family K00128,K00135 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 5.231e-232 724.0
PJD3_k127_5271781_1 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004265 563.0
PJD3_k127_5271781_2 Beta-ketoacyl synthase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 376.0
PJD3_k127_5271781_3 PFAM Bacterial regulatory proteins, crp family K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006181 304.0
PJD3_k127_5271781_4 Conserved hypothetical protein (DUF2461) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 286.0
PJD3_k127_5271781_5 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000001223 190.0
PJD3_k127_5271781_6 - - - - 0.0000000000000000000208 94.0
PJD3_k127_5271781_7 ligase activity - - - 0.000000000001299 70.0
PJD3_k127_528966_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 8.712e-217 676.0
PJD3_k127_528966_1 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 470.0
PJD3_k127_5307322_0 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 472.0
PJD3_k127_5307322_1 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 332.0
PJD3_k127_5307322_2 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 308.0
PJD3_k127_5307322_3 S1 domain K00243 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 286.0
PJD3_k127_5307322_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000305 282.0
PJD3_k127_5307322_5 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003198 251.0
PJD3_k127_5307322_6 Bacterial toxin 23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001343 250.0
PJD3_k127_5307322_7 PFAM Kelch motif - - - 0.0000000000000000000000000000000000000000000000000000000000000003467 235.0
PJD3_k127_5307828_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1137.0
PJD3_k127_5307828_1 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007934 332.0
PJD3_k127_5307828_2 metallopeptidase activity K01337,K13735,K15125 - 3.4.21.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003798 287.0
PJD3_k127_5307828_3 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001213 249.0
PJD3_k127_5307828_4 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000002203 173.0
PJD3_k127_5307828_5 Anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000002449 176.0
PJD3_k127_5308997_0 AcrB/AcrD/AcrF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009283 569.0
PJD3_k127_5308997_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000105 52.0
PJD3_k127_5322936_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 490.0
PJD3_k127_5322936_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 469.0
PJD3_k127_5322936_2 NMT1/THI5 like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 440.0
PJD3_k127_5322936_3 ABC-type multidrug transport system ATPase and permease K18890 - - 0.000000000000000000000000000000000000000000000000000000000000000005736 227.0
PJD3_k127_5344083_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 2.637e-198 621.0
PJD3_k127_5344083_1 NusB family K03625 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004552 428.0
PJD3_k127_5344083_2 ABC-type multidrug transport system ATPase and permease K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 342.0
PJD3_k127_5344083_3 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000000000001593 128.0
PJD3_k127_5344083_4 Domain of unknown function (DUF4294) - - - 0.000000000000000000000000000007728 126.0
PJD3_k127_5344083_5 Preprotein translocase subunit K03210 - - 0.000000000000000000000000001419 113.0
PJD3_k127_5346029_0 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 607.0
PJD3_k127_5346029_1 PFAM Polysaccharide biosynthesis protein K17716 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 601.0
PJD3_k127_5346029_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 328.0
PJD3_k127_5357335_0 PFAM DNA gyrase topoisomerase IV, subunit A K02621 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003976 417.0
PJD3_k127_5357335_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001899 241.0
PJD3_k127_5357335_2 cellular response to DNA damage stimulus - - - 0.0000000000000000000000000003566 119.0
PJD3_k127_5357335_3 Purple acid Phosphatase, N-terminal domain - - - 0.00003749 53.0
PJD3_k127_5394309_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 289.0
PJD3_k127_5394309_2 Domain of unknown function (DUF4328) - - - 0.000005493 53.0
PJD3_k127_5403300_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 472.0
PJD3_k127_5403300_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 309.0
PJD3_k127_5429384_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 507.0
PJD3_k127_5429384_1 Molybdenum cofactor biosynthesis K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006274 452.0
PJD3_k127_5429384_10 ABC transporter substrate-binding protein K02016 - - 0.00000000000000000000000003026 113.0
PJD3_k127_5429384_11 - - - - 0.0000000000000000002056 93.0
PJD3_k127_5429384_12 DoxX-like family - - - 0.00000000000000009284 85.0
PJD3_k127_5429384_13 Mo-molybdopterin cofactor metabolic process K03636 - - 0.0000000000392 66.0
PJD3_k127_5429384_14 cyclic nucleotide-binding K10914 - - 0.00001259 55.0
PJD3_k127_5429384_2 Molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007962 381.0
PJD3_k127_5429384_3 FecCD transport family K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003992 249.0
PJD3_k127_5429384_4 - catabolite gene activator and regulatory subunit of cAMP-dependent protein K01420 - - 0.0000000000000000000000000000000000000000000000000000000000001836 219.0
PJD3_k127_5429384_5 MoaE protein K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000000005987 214.0
PJD3_k127_5429384_6 abc transporter (atp-binding protein) K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000003711 170.0
PJD3_k127_5429384_7 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000001056 154.0
PJD3_k127_5429384_9 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.000000000000000000000000004452 113.0
PJD3_k127_5441566_0 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 313.0
PJD3_k127_5441566_1 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000001089 215.0
PJD3_k127_5441566_2 COG NOG19089 non supervised orthologous group - - - 0.0000000000000000000000000000000000000000000000000000004839 200.0
PJD3_k127_5441566_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000002159 113.0
PJD3_k127_5444082_0 C-terminal domain of CHU protein family - - - 1.146e-286 911.0
PJD3_k127_5444082_1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 432.0
PJD3_k127_5444082_2 Belongs to the ompA family - - - 0.000000000000000008673 96.0
PJD3_k127_5444231_0 OmpA family K03640 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004274 273.0
PJD3_k127_5444231_1 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000000000000000000000000000000000000000618 201.0
PJD3_k127_5444231_2 metallopeptidase activity - - - 0.0000000000000000008461 91.0
PJD3_k127_5444231_3 permease K09808 - - 0.0000009973 51.0
PJD3_k127_5444722_0 Aminotransferase class-III K01845 - 5.4.3.8 2.726e-220 689.0
PJD3_k127_5444722_1 Class I and II K14287 - 2.6.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 490.0
PJD3_k127_5444722_2 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000002373 254.0
PJD3_k127_5444722_3 amidohydrolase K13566 - 3.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000002705 250.0
PJD3_k127_5444722_4 SNARE associated Golgi protein - - - 0.00000000000000000000000000106 117.0
PJD3_k127_5444722_5 exo-alpha-(2->6)-sialidase activity - - - 0.0000004313 63.0
PJD3_k127_5444722_6 metallopeptidase activity - - - 0.00009403 54.0
PJD3_k127_5456996_0 Sortilin, neurotensin receptor 3, - - - 3.02e-310 962.0
PJD3_k127_5456996_1 OmpA family - - - 7.656e-265 831.0
PJD3_k127_5456996_2 Glycosyl hydrolases family 25 K07273 - - 0.000000000000000000000000000000000000000000000000000000000003681 216.0
PJD3_k127_5456996_3 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000007321 98.0
PJD3_k127_5458173_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 2.49e-236 734.0
PJD3_k127_5458173_1 PFAM Pregnancy-associated plasma protein-A - - - 8.795e-214 685.0
PJD3_k127_5458173_10 PFAM Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 358.0
PJD3_k127_5458173_11 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 314.0
PJD3_k127_5458173_12 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 308.0
PJD3_k127_5458173_13 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 296.0
PJD3_k127_5458173_14 RDD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002265 260.0
PJD3_k127_5458173_15 TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005178 246.0
PJD3_k127_5458173_16 Formyl transferase K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000236 211.0
PJD3_k127_5458173_17 PFAM MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000000000003265 175.0
PJD3_k127_5458173_18 PFAM short chain dehydrogenase K16216 - 1.1.1.320 0.00000000000000000000000000000000000000000000007651 177.0
PJD3_k127_5458173_19 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000001419 149.0
PJD3_k127_5458173_2 PFAM Cys Met metabolism PLP-dependent enzyme K01739,K01758,K01760 - 2.5.1.48,4.4.1.1,4.4.1.8 9.014e-199 623.0
PJD3_k127_5458173_20 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000009024 142.0
PJD3_k127_5458173_21 Uncharacterised protein family UPF0102 K07460 - - 0.0000000000000000000000000000000000698 136.0
PJD3_k127_5458173_22 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.0000000000000000000000000000000311 134.0
PJD3_k127_5458173_3 PFAM Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 592.0
PJD3_k127_5458173_4 PFAM Pregnancy-associated plasma protein-A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 467.0
PJD3_k127_5458173_5 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 424.0
PJD3_k127_5458173_6 Pfam Sodium hydrogen exchanger - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004757 399.0
PJD3_k127_5458173_7 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 389.0
PJD3_k127_5458173_8 Methylase involved in ubiquinone menaquinone biosynthesis K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008569 384.0
PJD3_k127_5458173_9 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006947 357.0
PJD3_k127_5495863_0 cellulase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 512.0
PJD3_k127_5495863_1 YARHG - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 396.0
PJD3_k127_5495863_2 Predicted membrane protein (DUF2306) - - - 0.00000000000000000000000000000000000000000000000000000000000000001889 229.0
PJD3_k127_5495863_3 Thioesterase domain - - - 0.0000000000000000000000000000000000003516 145.0
PJD3_k127_551573_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 8.38e-260 823.0
PJD3_k127_551573_1 GIY-YIG type nucleases (URI domain) K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 581.0
PJD3_k127_551573_2 membrane - - - 0.0000000000000000000000000000000000000002088 160.0
PJD3_k127_551573_3 prohibitin homologues - - - 0.000000000000000000000000000007662 130.0
PJD3_k127_5517720_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 5.948e-202 655.0
PJD3_k127_5517720_1 PFAM Aminotransferase class I and II K00812,K14260 - 2.6.1.1,2.6.1.2,2.6.1.66 8.736e-201 629.0
PJD3_k127_554516_0 - - - - 0.0 1100.0
PJD3_k127_5546686_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 1.192e-205 647.0
PJD3_k127_5546686_1 Cytochrome oxidase assembly protein K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 355.0
PJD3_k127_5546686_2 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000008054 63.0
PJD3_k127_5561441_0 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 343.0
PJD3_k127_5561441_1 Amidinotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 314.0
PJD3_k127_5561441_2 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000000000002581 84.0
PJD3_k127_5597149_0 AsmA-like C-terminal region - - - 0.0 1052.0
PJD3_k127_5597149_1 COGs COG1252 NADH dehydrogenase FAD-containing subunit K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000064 511.0
PJD3_k127_5603849_0 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.0000000000000000000000000000000000000000000000000000000000000006231 251.0
PJD3_k127_5603849_1 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000002014 223.0
PJD3_k127_5603849_2 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000001719 201.0
PJD3_k127_5603849_3 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000002803 166.0
PJD3_k127_5666771_0 PFAM UDP-glucose GDP-mannose dehydrogenase family, NAD binding domain K00012 - 1.1.1.22 1.528e-216 679.0
PJD3_k127_5666771_1 PFAM NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 605.0
PJD3_k127_5666771_2 Oxidoreductase family, C-terminal alpha beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005898 590.0
PJD3_k127_5666771_3 Hexapeptide repeat of succinyl-transferase K13018 - 2.3.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006011 316.0
PJD3_k127_5666771_4 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.00000000000000000000000000000000005827 136.0
PJD3_k127_569944_0 metallopeptidase activity K01337 - 3.4.21.50 2.574e-264 840.0
PJD3_k127_569944_1 Phosphorylase superfamily K00757 - 2.4.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 377.0
PJD3_k127_569944_2 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006119 357.0
PJD3_k127_569944_3 sh3 domain protein - - - 0.0000000000000000000000000000000003743 136.0
PJD3_k127_5704159_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000308 523.0
PJD3_k127_5704159_1 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 404.0
PJD3_k127_5704159_2 GSCFA domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009432 253.0
PJD3_k127_5704159_3 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003055 245.0
PJD3_k127_5704159_5 Domain of unknown function (DUF4835) - - - 0.00000000000000000002653 91.0
PJD3_k127_5712747_0 Cytochrome C assembly protein - - - 0.0 1021.0
PJD3_k127_5712747_1 membrane - - - 5.152e-316 993.0
PJD3_k127_5712747_2 ABC-type uncharacterized transport system K01992 - - 9.735e-199 632.0
PJD3_k127_5712747_3 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 515.0
PJD3_k127_5712747_4 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 399.0
PJD3_k127_5712747_5 S-adenosyl-l-methionine hydroxide adenosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005901 316.0
PJD3_k127_5712747_6 TIGRFAM gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 311.0
PJD3_k127_5712747_7 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000009527 123.0
PJD3_k127_5712747_8 glyoxalase III activity K13653 - - 0.00000000000000000000000002787 109.0
PJD3_k127_5713506_0 STAS domain K03321 - - 3.168e-269 835.0
PJD3_k127_5713506_1 - - - - 0.00000000000000000000000000000000000000000000000006877 195.0
PJD3_k127_5713506_2 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.0000000000000000000000000000002445 124.0
PJD3_k127_5713506_3 phenylacetate-CoA ligase activity - - - 0.0000000000001318 72.0
PJD3_k127_5713506_4 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.0000000000004242 69.0
PJD3_k127_5717213_0 Chitobiase/beta-hexosaminidase C-terminal domain - - - 8.457e-302 955.0
PJD3_k127_5717213_1 Organic solvent tolerance protein OstA - - - 6.06e-233 747.0
PJD3_k127_5717213_10 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004226 244.0
PJD3_k127_5717213_11 Phosphoheptose isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003186 236.0
PJD3_k127_5717213_12 Uncharacterized ACR, COG1678 K07735 - - 0.000000000000000000000000000000000000000000000000000007296 195.0
PJD3_k127_5717213_13 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000007945 158.0
PJD3_k127_5717213_2 4Fe-4S dicluster domain - - - 2.018e-217 681.0
PJD3_k127_5717213_3 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 5.689e-204 645.0
PJD3_k127_5717213_4 ATPase family associated with various cellular activities (AAA) K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 599.0
PJD3_k127_5717213_5 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000576 484.0
PJD3_k127_5717213_6 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006298 468.0
PJD3_k127_5717213_7 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 417.0
PJD3_k127_5717213_8 Glucokinase K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000511 389.0
PJD3_k127_5717213_9 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 374.0
PJD3_k127_5721843_0 Deoxyhypusine synthase K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005026 599.0
PJD3_k127_5721843_1 Belongs to the arginase family K01480 - 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 446.0
PJD3_k127_5721843_2 decarboxylase K01585 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000009983 228.0
PJD3_k127_5721843_3 RF-1 domain K15034 - - 0.00000000000000000000000000000000003513 138.0
PJD3_k127_5721843_4 Protein conserved in bacteria - - - 0.000000000000000000000000000000006358 131.0
PJD3_k127_579045_0 Glutamine synthetase type III N terminal K01915 - 6.3.1.2 0.0 1069.0
PJD3_k127_579045_1 Peptidase M16 inactive domain - - - 1.545e-227 724.0
PJD3_k127_579045_10 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000009532 224.0
PJD3_k127_579045_11 Transglycosylase associated protein - - - 0.0000000000000003253 81.0
PJD3_k127_579045_12 Belongs to the ompA family - - - 0.000000000000003706 81.0
PJD3_k127_579045_14 lysine biosynthetic process via aminoadipic acid K00997,K06133 - 2.7.8.7 0.0000008627 58.0
PJD3_k127_579045_2 Insulinase (Peptidase family M16) - - - 8.256e-213 670.0
PJD3_k127_579045_3 PFAM Acyl-coenzyme A 6-aminopenicillanic acid acyl-transferase - - - 1.126e-211 671.0
PJD3_k127_579045_4 AMP-binding enzyme K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 527.0
PJD3_k127_579045_5 PFAM Peptidase M16 inactive domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006988 467.0
PJD3_k127_579045_6 Tryptophan halogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 344.0
PJD3_k127_579045_7 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002916 335.0
PJD3_k127_579045_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 291.0
PJD3_k127_579045_9 Domain of unknown function (DUF4494) - - - 0.00000000000000000000000000000000000000000000000000000000000000004982 229.0
PJD3_k127_5792073_0 Fungalysin metallopeptidase (M36) - - - 5.118e-284 902.0
PJD3_k127_5792073_1 alpha beta - - - 0.000000000000000000000000000000000000000000000000000000000000000007353 234.0
PJD3_k127_5792073_2 Redoxin - - - 0.00000000000000000000000000000000000001316 147.0
PJD3_k127_5792073_3 protein homooligomerization - - - 0.00000000000000000000000000000000001633 157.0
PJD3_k127_5836974_0 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 553.0
PJD3_k127_5836974_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004119 528.0
PJD3_k127_5836974_10 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000001774 218.0
PJD3_k127_5836974_11 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000007052 219.0
PJD3_k127_5836974_12 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000006877 194.0
PJD3_k127_5836974_13 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000000000000000002512 189.0
PJD3_k127_5836974_14 OmpA family - - - 0.00000000000000000000000000000000000000000000000001952 187.0
PJD3_k127_5836974_15 OmpA family - - - 0.000000000000000000000000000000000000000000000008521 179.0
PJD3_k127_5836974_16 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000000000003875 150.0
PJD3_k127_5836974_2 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 433.0
PJD3_k127_5836974_3 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 420.0
PJD3_k127_5836974_4 efflux protein, MATE family K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 418.0
PJD3_k127_5836974_5 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000431 326.0
PJD3_k127_5836974_6 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 290.0
PJD3_k127_5836974_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001938 242.0
PJD3_k127_5836974_8 SpoU rRNA Methylase family K00556 - 2.1.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000231 242.0
PJD3_k127_5836974_9 KTSC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000005789 228.0
PJD3_k127_5840158_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 - 3.4.21.83 2.594e-278 867.0
PJD3_k127_5840158_1 TonB dependent receptor - - - 3.483e-249 789.0
PJD3_k127_5840158_10 - - - - 0.000186 48.0
PJD3_k127_5840158_2 Outer membrane protein beta-barrel family - - - 3.176e-197 647.0
PJD3_k127_5840158_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 470.0
PJD3_k127_5840158_4 PFAM Scaffold protein Nfu NifU N terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 296.0
PJD3_k127_5840158_5 Protein of unknown function (Porph_ging) - - - 0.000000000000000000000000000000000000000000000006062 181.0
PJD3_k127_5840158_6 Heavy-metal-associated domain - - - 0.00000000000000000000000000004642 119.0
PJD3_k127_5861663_0 Chorismate mutase type II K04516 - 5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 504.0
PJD3_k127_5861663_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 416.0
PJD3_k127_5861663_2 Lipase (class 3) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007001 379.0
PJD3_k127_5861663_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 355.0
PJD3_k127_5861663_4 Glycoprotease family K14742 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002314 243.0
PJD3_k127_5861663_5 Phosphoribosyl-ATP pyrophosphohydrolase - - - 0.000000000000000000000000000000000000000000000000000000003198 201.0
PJD3_k127_5861663_6 gliding motility-associated lipoprotein GldK - - - 0.00000000000000000000000000000000000000002821 164.0
PJD3_k127_5861663_7 pfam nudix - - - 0.00000000000000000000000000000000002015 139.0
PJD3_k127_5877949_0 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003523 268.0
PJD3_k127_5877949_1 BON domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000005961 235.0
PJD3_k127_5877949_2 cellular response to DNA damage stimulus - - - 0.00000000000000000000000000000001788 132.0
PJD3_k127_5877949_3 alpha beta - - - 0.0000000000000000000000000000005531 130.0
PJD3_k127_5877949_4 cellular response to DNA damage stimulus - - - 0.00000000000000000000000001669 115.0
PJD3_k127_5877949_5 - - - - 0.0003092 49.0
PJD3_k127_5912503_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 2.051e-199 631.0
PJD3_k127_5912503_1 Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 551.0
PJD3_k127_5912503_2 Glycosyl transferase family 2 K12984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 316.0
PJD3_k127_5912503_3 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.000000000000000000000000000000000000000000000000000000000003527 209.0
PJD3_k127_5912503_4 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000474 201.0
PJD3_k127_5912503_5 Domain of unknown function (DUF4837) - - - 0.0000000000000000000000000000003743 136.0
PJD3_k127_5912503_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000001356 75.0
PJD3_k127_5927281_0 Pseudouridine synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 303.0
PJD3_k127_5927281_1 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006792 312.0
PJD3_k127_5927281_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000004044 218.0
PJD3_k127_5927281_3 Lysin motif - - - 0.00000000000000000000000000000000000000000000000000000002235 207.0
PJD3_k127_5927281_4 PFAM Rhodanese-like domain - - - 0.0000000000000000000000000009088 114.0
PJD3_k127_5927281_5 Cysteine-rich secretory protein family - - - 0.000000000000000000000007529 113.0
PJD3_k127_5927281_6 Serine Threonine protein kinase K08884 - 2.7.11.1 0.000000000000000001174 93.0
PJD3_k127_5944020_0 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 359.0
PJD3_k127_5944020_1 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 346.0
PJD3_k127_5944020_2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991,K21681 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 1.1.1.405,2.7.7.40,2.7.7.60 0.000000000000000000000000000000000000000000000000000000001671 208.0
PJD3_k127_5944020_3 Domain of unknown function (DUF4286) - - - 0.00000000000000000000000000002153 119.0
PJD3_k127_5961584_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 485.0
PJD3_k127_5961584_1 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 377.0
PJD3_k127_5961584_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 347.0
PJD3_k127_6019536_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370,K17050 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009898,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0031235,GO:0032991,GO:0042126,GO:0043436,GO:0043546,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0097159,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204,GO:2001057 1.7.5.1 0.0 1889.0
PJD3_k127_6019536_1 nitrate reductase beta subunit K00371 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009898,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0031235,GO:0032991,GO:0033554,GO:0042126,GO:0043436,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0048037,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204,GO:2001057 1.7.5.1 2.806e-266 825.0
PJD3_k127_6019536_10 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000003031 122.0
PJD3_k127_6019536_11 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000002444 114.0
PJD3_k127_6019536_2 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 4.675e-220 689.0
PJD3_k127_6019536_3 Belongs to the phosphatidylserine decarboxylase family K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 394.0
PJD3_k127_6019536_4 neuron death in response to oxidative stress K01173 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 366.0
PJD3_k127_6019536_5 nitrate reductase activity K00370,K00374,K02575 GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006950,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009628,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0036293,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0046906,GO:0048037,GO:0050896,GO:0055114,GO:0070469,GO:0070470,GO:0070482,GO:0071944,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 308.0
PJD3_k127_6019536_6 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000186 246.0
PJD3_k127_6019536_7 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000002544 208.0
PJD3_k127_6019536_8 chaperone-mediated protein complex assembly K00373,K17052 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016530,GO:0022607,GO:0034622,GO:0042126,GO:0042128,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0051131,GO:0065003,GO:0071704,GO:0071840,GO:0071941,GO:0140104,GO:2001057 - 0.0000000000000000000000000000000000000000000000005696 183.0
PJD3_k127_6019536_9 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000136 147.0
PJD3_k127_6061081_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.027e-229 726.0
PJD3_k127_6061081_1 collagenase K08303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 608.0
PJD3_k127_6061081_2 Rhodanase C-terminal K07146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 576.0
PJD3_k127_6061081_3 Sodium:dicarboxylate symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000498 284.0
PJD3_k127_6061081_4 - - - - 0.0000000000000000000000000000000000000000000002102 170.0
PJD3_k127_6061081_5 Protein of unknown function (DUF4199) - - - 0.0000000000000000000000000000000004468 137.0
PJD3_k127_6061081_6 4Fe-4S single cluster domain of Ferredoxin I K05337 - - 0.0000000000000000000000000001136 116.0
PJD3_k127_6061081_8 Belongs to the UPF0176 family K07146 - - 0.00000000003128 64.0
PJD3_k127_6061081_9 Belongs to the UPF0502 family K09915 - - 0.00009787 45.0
PJD3_k127_609319_0 ABC transporter transmembrane region K18889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000721 336.0
PJD3_k127_609319_1 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002123 274.0
PJD3_k127_609319_2 Protein of unknown function (DUF3276) - - - 0.0000000000000000000000000002355 117.0
PJD3_k127_6117813_0 periplasmic ligand-binding sensor domain - - - 2.561e-233 745.0
PJD3_k127_6117813_1 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007744 602.0
PJD3_k127_6117813_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 507.0
PJD3_k127_6117813_3 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 409.0
PJD3_k127_6117813_4 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002737 280.0
PJD3_k127_6117813_5 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000003536 225.0
PJD3_k127_6117813_6 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000001432 129.0
PJD3_k127_6117813_7 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000005434 133.0
PJD3_k127_6117813_8 transcriptional regulator - - - 0.00000000000001639 74.0
PJD3_k127_6129795_0 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 324.0
PJD3_k127_615124_0 COG3420 Nitrous oxidase accessory protein K07218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004313 499.0
PJD3_k127_615124_1 AAA domain, putative AbiEii toxin, Type IV TA system K19340 - - 0.00000000000000000000000000000000000000000000000000000000000000003884 226.0
PJD3_k127_615124_2 lipoprotein involved in nitrous oxide reduction K19342 - - 0.0000000000000000000000000001508 117.0
PJD3_k127_6156244_0 Belongs to the peptidase S8 family K00368 - 1.7.2.1 0.000000000000000000000000000000000000000000000001307 196.0
PJD3_k127_6156244_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000003826 128.0
PJD3_k127_6170760_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1329.0
PJD3_k127_6170760_1 DALR_2 K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 526.0
PJD3_k127_6170760_2 Protein of unknown function (DUF2891) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004449 465.0
PJD3_k127_6170760_3 Heavy metal-associated domain protein K08364 - - 0.00000000000000000000121 98.0
PJD3_k127_6170760_4 response to abiotic stimulus K01011,K06867 - 2.8.1.1,2.8.1.2 0.00000000003656 71.0
PJD3_k127_6170760_5 - - - - 0.0002123 47.0
PJD3_k127_6170828_0 PFAM PKD domain - - - 0.0 1385.0
PJD3_k127_6170828_1 PFAM PKD domain - - - 2.96e-201 641.0
PJD3_k127_6170828_2 PFAM M42 glutamyl aminopeptidase - - - 0.00000000000000000307 85.0
PJD3_k127_6177127_0 Phosphoribosyl synthetase-associated domain K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 520.0
PJD3_k127_6177127_1 COGs COG3023 Negative regulator of beta-lactamase expression - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 402.0
PJD3_k127_6177127_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000007669 231.0
PJD3_k127_6177127_3 Colicin V production protein K03558 - - 0.000000000000000000000000000000000000000000000002759 178.0
PJD3_k127_6177127_4 YceI-like domain - - - 0.0000000000000000000000000000000002333 140.0
PJD3_k127_6177127_5 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000004144 92.0
PJD3_k127_6181015_0 Beta-Casp domain K07576 - - 1.684e-196 623.0
PJD3_k127_6181015_1 DNA/RNA non-specific endonuclease K01173 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 339.0
PJD3_k127_6181015_10 - - - - 0.0000000627 59.0
PJD3_k127_6181015_2 PFAM ATP cone domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 330.0
PJD3_k127_6181015_3 domain protein K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 320.0
PJD3_k127_6181015_4 PFAM Kelch motif - - - 0.000000000000000000000000000000000000000000001937 179.0
PJD3_k127_6181015_5 Prolyl 4-hydroxylase alpha subunit homologues. - - - 0.0000000000000000000000000000000000001764 154.0
PJD3_k127_6181015_6 - - - - 0.0000000000000000000000000000000003913 136.0
PJD3_k127_6181015_7 Short C-terminal domain K08982 - - 0.0000000000000000000000005632 105.0
PJD3_k127_6181015_8 Pyrimidine nucleoside phosphorylase C-terminal domain K00756,K00758 - 2.4.2.2,2.4.2.4 0.0000000000000000000008278 96.0
PJD3_k127_6181015_9 Pkd domain containing protein - - - 0.000000000000007691 88.0
PJD3_k127_6181631_0 Beta-ketoacyl synthase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 296.0
PJD3_k127_6181631_1 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000005111 258.0
PJD3_k127_6181631_2 Polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000000000000000000000000000000000001492 183.0
PJD3_k127_6181631_3 PFAM Outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000000000000000004999 92.0
PJD3_k127_6182695_0 Glycosyl transferases group 1 - - - 7.528e-248 788.0
PJD3_k127_6182695_1 beta-1,4-mannooligosaccharide phosphorylase K20885 - 2.4.1.339,2.4.1.340 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 387.0
PJD3_k127_6182695_2 Phosphoribosyl transferase domain K07100 - - 0.000000000000000000000000000000000000000000000002823 180.0
PJD3_k127_6182695_3 Uncharacterized conserved protein (DUF2267) - - - 0.00000000000000000000000000000006068 129.0
PJD3_k127_6182695_4 - - - - 0.0000000000002782 72.0
PJD3_k127_6182695_6 Short C-terminal domain K08982 - - 0.0000003972 54.0
PJD3_k127_6186305_0 ABC-2 family transporter protein K09696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 368.0
PJD3_k127_6188116_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 524.0
PJD3_k127_6188116_1 PFAM Pregnancy-associated plasma protein-A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006681 383.0
PJD3_k127_6188116_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 304.0
PJD3_k127_6188116_3 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K07025 - - 0.000000000000000000000000000000000000000000002377 169.0
PJD3_k127_6188116_4 response to oxidative stress K04063 - - 0.000000000000000000000000000000000000000004279 158.0
PJD3_k127_6188116_5 Protein conserved in bacteria - - - 0.0001086 51.0
PJD3_k127_6190333_0 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 393.0
PJD3_k127_6190333_1 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006639 335.0
PJD3_k127_6190333_2 PFAM Rhomboid family - - - 0.000000000001423 71.0
PJD3_k127_6215634_0 Aromatic amino acid lyase K01745,K10774 - 4.3.1.23,4.3.1.3 5.14e-229 719.0
PJD3_k127_6215634_1 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 1.472e-207 650.0
PJD3_k127_6215634_10 Phosphopantetheine attachment site K02078 - - 0.000000000000000000000000000004231 120.0
PJD3_k127_6215634_11 Phosphopantetheine attachment site K02078 - - 0.0000000000000000000000000001341 116.0
PJD3_k127_6215634_12 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity - - - 0.0000000000000000000000191 105.0
PJD3_k127_6215634_2 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 502.0
PJD3_k127_6215634_3 KR domain K00023,K00059 - 1.1.1.100,1.1.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 385.0
PJD3_k127_6215634_4 PFAM Bacterial lipid A biosynthesis acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 366.0
PJD3_k127_6215634_5 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 357.0
PJD3_k127_6215634_6 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 294.0
PJD3_k127_6215634_7 O-methyltransferase K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009523 293.0
PJD3_k127_6215634_8 TIGRFAM acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.000000000000000000000000000000000000000000000000000000003569 202.0
PJD3_k127_6215634_9 3-oxoacyl-(ACP) synthase - - - 0.000000000000000000000000000000000000000004003 161.0
PJD3_k127_6216240_0 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004994 469.0
PJD3_k127_6216240_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family K19355 - 3.2.1.78 0.00000001307 66.0
PJD3_k127_6221900_0 Conserved repeat domain - - - 0.00000000000000000000000000000000000000000000000000000000000001196 244.0
PJD3_k127_6221900_1 domain, Protein K01337 - 3.4.21.50 0.000000000000000005509 84.0
PJD3_k127_6238077_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0 1120.0
PJD3_k127_6244122_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 552.0
PJD3_k127_6244122_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 460.0
PJD3_k127_6244122_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006271 347.0
PJD3_k127_6244122_3 PFAM Bacterial phospho-glucose isomerase C-terminal region K15916 - 5.3.1.8,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 323.0
PJD3_k127_6244122_4 - - - - 0.00000000000000000000000000000000000000000000000000000008223 201.0
PJD3_k127_6244122_5 - - - - 0.0000000000000000000000000000000000000000000000000000001243 197.0
PJD3_k127_6244122_6 NifU-like domain - - - 0.000000000000000000000003229 104.0
PJD3_k127_6270213_0 M61 glycyl aminopeptidase - - - 3.155e-213 676.0
PJD3_k127_6270213_1 cold-shock protein K03704 - - 0.0000000000000000000000000001719 115.0
PJD3_k127_6270213_2 Methyltransferase FkbM domain - - - 0.0000000000000000000001227 101.0
PJD3_k127_6277671_0 PFAM Peptidase family M1 K01256 - 3.4.11.2 2.162e-303 954.0
PJD3_k127_6277671_1 COGs COG1233 Phytoene dehydrogenase and related protein K09835 - 5.2.1.13 4.482e-236 742.0
PJD3_k127_6277671_10 Protein of unknown function (DUF2490) - - - 0.000000000001548 76.0
PJD3_k127_6277671_11 FMN_bind - - - 0.000000000001839 74.0
PJD3_k127_6277671_2 - - - - 3.469e-227 717.0
PJD3_k127_6277671_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 586.0
PJD3_k127_6277671_4 CotH kinase protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008692 552.0
PJD3_k127_6277671_5 AhpC TSA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000377 264.0
PJD3_k127_6277671_6 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000001001 230.0
PJD3_k127_6277671_7 Outer membrane protein Omp28 - - - 0.00000000000000000000000000000000000000000000000000000000005846 216.0
PJD3_k127_6277671_8 Biotin-requiring enzyme K01960 - 6.4.1.1 0.000000000000000000000000000000000000000000000000004805 184.0
PJD3_k127_6281381_0 PFAM Glycosyl hydrolase family 3 N terminal domain - - - 1.119e-295 930.0
PJD3_k127_6281381_1 PAP2 superfamily C-terminal - - - 0.000000000000000006177 90.0
PJD3_k127_6288438_0 CarboxypepD_reg-like domain - - - 0.0 1118.0
PJD3_k127_6288438_1 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 1.496e-252 796.0
PJD3_k127_6288438_2 Domain of unknown function (DUF4249) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 397.0
PJD3_k127_6301128_0 C-terminal domain of CHU protein family - - - 9.708e-303 947.0
PJD3_k127_6301128_1 Calx-beta domain - - - 1.796e-257 816.0
PJD3_k127_6301128_2 Fibronectin type III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005334 614.0
PJD3_k127_6301128_3 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 334.0
PJD3_k127_6301128_4 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007077 284.0
PJD3_k127_6301128_5 peptidase M23 - - - 0.00000000000000000000000000000000000000005569 162.0
PJD3_k127_6301128_6 abc transporter (atp-binding protein) K11085 - - 0.000000000000000000000002427 103.0
PJD3_k127_6301128_7 Belongs to the peptidase S8 family - - - 0.000000000000000003121 101.0
PJD3_k127_6312637_0 Nucleoside recognition K06373 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000719 475.0
PJD3_k127_6312637_1 phenylacetate-CoA ligase activity - - - 0.0000000000000000000000000005992 122.0
PJD3_k127_6314752_0 TIGRFAM branched-chain amino acid aminotransferase, group II K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 535.0
PJD3_k127_6314752_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 297.0
PJD3_k127_6314752_2 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000006158 232.0
PJD3_k127_6314752_3 TIGRFAM ATP-dependent DNA helicase, RecQ family K03654 - 3.6.4.12 0.0000000000000000000002829 97.0
PJD3_k127_6314752_4 PFAM Formylglycine-generating sulfatase enzyme K20276 - - 0.00000000000008827 83.0
PJD3_k127_6320955_0 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 595.0
PJD3_k127_6320955_1 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000005935 241.0
PJD3_k127_6320955_2 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000000000000000000000000000000000000000000000000001308 197.0
PJD3_k127_6320955_3 cytochrome C - - - 0.00000000000000000000000000000000000000002531 157.0
PJD3_k127_6320955_4 - - - - 0.0000000000000000000000465 106.0
PJD3_k127_6320955_5 Nitrous oxide reductase K00376 - 1.7.2.4 0.000000002484 59.0
PJD3_k127_6323360_0 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 9.476e-199 625.0
PJD3_k127_6323360_1 GlcNAc-PI de-N-acetylase K01463 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 331.0
PJD3_k127_6323360_2 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000008462 153.0
PJD3_k127_6323360_3 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000006978 48.0
PJD3_k127_6330868_0 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000001164 165.0
PJD3_k127_6330868_1 - - - - 0.000000000000000000000000000004619 132.0
PJD3_k127_6344723_0 SPTR CHU large protein - - - 0.000000000000000000000000000000000000000000000206 187.0
PJD3_k127_6344723_1 Hep Hag repeat protein - - - 0.000000000000000000000000000000005879 137.0
PJD3_k127_6345684_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0 1015.0
PJD3_k127_6345684_1 Domain of unknown function (DUF4270) - - - 0.000000000000000000000000000000000000000000003125 175.0
PJD3_k127_6345684_2 Male sterility protein K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000005058 162.0
PJD3_k127_6345684_3 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K07443 - 2.1.1.63 0.00000000000000000000000000000000000000000199 158.0
PJD3_k127_6349865_0 Major facilitator superfamily K08151 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 573.0
PJD3_k127_6349865_1 PFAM Peptidase C1-like family K01372 - 3.4.22.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 463.0
PJD3_k127_6349865_10 Metal-sensitive transcriptional repressor - - - 0.0000000000000000001353 91.0
PJD3_k127_6349865_11 Acetyltransferase (GNAT) domain - - - 0.0000000000001241 71.0
PJD3_k127_6349865_2 AdoMet dependent proline di-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 334.0
PJD3_k127_6349865_3 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979,K19714 - 1.1.3.48,2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 327.0
PJD3_k127_6349865_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 315.0
PJD3_k127_6349865_5 Sporulation related domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 300.0
PJD3_k127_6349865_6 COG4206 Outer membrane cobalamin receptor protein K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002741 290.0
PJD3_k127_6349865_7 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000005683 180.0
PJD3_k127_6349865_8 - - - - 0.000000000000000000000000000000000000000000005673 175.0
PJD3_k127_6349865_9 SprB repeat - - - 0.00000000000000000000000000000005609 139.0
PJD3_k127_6350157_0 M61 glycyl aminopeptidase - - - 2.631e-228 721.0
PJD3_k127_6350157_1 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 470.0
PJD3_k127_6350157_10 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.00000003385 57.0
PJD3_k127_6350157_2 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007426 377.0
PJD3_k127_6350157_3 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 295.0
PJD3_k127_6350157_4 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000002617 233.0
PJD3_k127_6350157_5 Transposase K18827 - 2.1.1.294,2.7.1.181 0.0000000000000000000000000000000000000000000000000000000000001029 223.0
PJD3_k127_6350157_7 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.00000000000000000000000000000000009238 139.0
PJD3_k127_6350157_8 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.0000000000000000000000000005564 116.0
PJD3_k127_6365075_0 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00226,K00254 - 1.3.5.2,1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 465.0
PJD3_k127_6365075_1 HMGL-like K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 300.0
PJD3_k127_6365075_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000004537 50.0
PJD3_k127_6369045_0 PFAM PKD domain - - - 0.0 1095.0
PJD3_k127_6369045_1 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 511.0
PJD3_k127_6374015_0 Protein of unknown function (DUF3641) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 479.0
PJD3_k127_6374015_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 387.0
PJD3_k127_6374015_2 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000238 256.0
PJD3_k127_6374015_3 Universal stress protein - - - 0.0000000000000000000000000000000000000000002492 169.0
PJD3_k127_6374015_4 Transcriptional regulator, Crp Fnr family - - - 0.0000000001157 63.0
PJD3_k127_6385998_0 leucine- rich repeat protein - - - 0.000000000000000000000000000000000000000000000000000001915 205.0
PJD3_k127_6385998_1 Methyltransferase domain - - - 0.000000000000000000001022 97.0
PJD3_k127_6393725_0 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009937 535.0
PJD3_k127_6393725_1 Specifically methylates the adenine in position 1618 of 23S rRNA K06970 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052907,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 429.0
PJD3_k127_6393725_2 2-Nitropropane dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001428 249.0
PJD3_k127_6393725_3 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000005991 133.0
PJD3_k127_6393725_4 C-terminal domain of CHU protein family - - - 0.000000000000000000009303 109.0
PJD3_k127_6393725_5 Belongs to the universal stress protein A family - - - 0.00000000000000000006523 100.0
PJD3_k127_6393725_6 metallopeptidase activity - - - 0.0000000000000000001113 106.0
PJD3_k127_6399453_0 Domain of unknown function (DUF3362) - - - 0.0 1090.0
PJD3_k127_6399453_1 COGs COG3023 Negative regulator of beta-lactamase expression - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009781 477.0
PJD3_k127_6399453_2 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007659 254.0
PJD3_k127_6399453_4 - - - - 0.00000000000000000000000001812 118.0
PJD3_k127_6399453_5 PFAM Bacterial phospho-glucose isomerase C-terminal region K15916 - 5.3.1.8,5.3.1.9 0.00000000000006977 73.0
PJD3_k127_641977_0 Psort location Cytoplasmic, score 9.97 K01840 - 5.4.2.8 1.369e-202 639.0
PJD3_k127_641977_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 332.0
PJD3_k127_641977_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000003957 240.0
PJD3_k127_641977_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000001956 217.0
PJD3_k127_641977_4 N-terminal domain of unknown function (DUF4140) - - - 0.0000000000000000000000005376 107.0
PJD3_k127_6439774_0 Glu Leu Phe Val dehydrogenase, dimerisation domain K00261 - 1.4.1.3 2.911e-218 681.0
PJD3_k127_6439774_1 Acyl-CoA dehydrogenase, N-terminal domain - - - 3.034e-214 668.0
PJD3_k127_6439774_2 Na H antiporter NhaD and related arsenite - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 566.0
PJD3_k127_6439774_3 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346 372.0
PJD3_k127_6439774_4 PFAM MotA TolQ ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000002137 236.0
PJD3_k127_6439774_5 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000001754 98.0
PJD3_k127_6439774_6 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000197 57.0
PJD3_k127_6451922_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 1.002e-264 825.0
PJD3_k127_6451922_1 Protein of unknown function (DUF3419) K13622 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 461.0
PJD3_k127_6451922_2 -acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 333.0
PJD3_k127_6451922_3 dolichyl monophosphate biosynthetic process K00981,K18678 - 2.7.1.182,2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002508 270.0
PJD3_k127_6451922_4 AMP-binding enzyme K22319 - 6.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000002185 243.0
PJD3_k127_6452124_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1197.0
PJD3_k127_6452124_1 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000001087 195.0
PJD3_k127_6452124_2 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000001191 58.0
PJD3_k127_6457821_0 FAD dependent oxidoreductase K00382 - 1.8.1.4 1.757e-246 769.0
PJD3_k127_6457821_1 Homoserine dehydrogenase, NAD binding domain K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 476.0
PJD3_k127_6457821_10 Peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.0000000000000000000000000000000000005123 151.0
PJD3_k127_6457821_11 OsmC-like protein K07397 - - 0.00000000000000000000000000000567 123.0
PJD3_k127_6457821_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004731 432.0
PJD3_k127_6457821_3 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 403.0
PJD3_k127_6457821_4 Methionine gamma-lyase K10764 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 393.0
PJD3_k127_6457821_5 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000004951 258.0
PJD3_k127_6457821_6 SPTR CHU large protein - - - 0.000000000000000000000000000000000000000000000000000000000009047 218.0
PJD3_k127_6457821_7 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000006803 191.0
PJD3_k127_6457821_8 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.00000000000000000000000000000000000000000009485 161.0
PJD3_k127_6464913_0 LETM1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007645 366.0
PJD3_k127_6464913_1 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000128 192.0
PJD3_k127_646673_0 PFAM Signal transduction histidine kinase, internal region - - - 5.117e-205 661.0
PJD3_k127_646673_1 PFAM tRNA synthetases class I (I, L, M and V) K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 435.0
PJD3_k127_646673_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 393.0
PJD3_k127_646673_3 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 375.0
PJD3_k127_646673_4 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005961 277.0
PJD3_k127_646673_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000001207 175.0
PJD3_k127_646673_6 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K20866 - 3.1.3.10 0.00000000000000000000000000000000000000000000001292 177.0
PJD3_k127_646673_7 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000269 98.0
PJD3_k127_646673_8 YceI-like domain - - - 0.0000000000448 71.0
PJD3_k127_6468965_0 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 491.0
PJD3_k127_6468965_1 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007005 477.0
PJD3_k127_6468965_2 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 426.0
PJD3_k127_6468965_3 Membrane protein TerC, possibly involved in tellurium resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000996 299.0
PJD3_k127_6468965_4 chorismate binding enzyme K02361,K02552 - 5.4.4.2 0.0000000000000000000000000000000000000000000000000000000000007401 222.0
PJD3_k127_6468965_5 Thioredoxin-like domain K03671 - - 0.0000000000000000000000000000000000000000000000000000001682 195.0
PJD3_k127_6468965_6 Thioesterase superfamily K19222 - 3.1.2.28 0.00000000000000000000000000000000000000000000000051 180.0
PJD3_k127_6468965_7 cellulose binding - - - 0.0000000000000000000000000000000000000000002862 179.0
PJD3_k127_6468965_8 Protein of unknown function (DUF493) K09158 - - 0.0000000000000000000000001817 108.0
PJD3_k127_6473101_0 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 542.0
PJD3_k127_6473101_1 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 471.0
PJD3_k127_6473101_2 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 383.0
PJD3_k127_6473101_3 Transcriptional regulatory protein, C terminal K07658 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004314 269.0
PJD3_k127_6473101_4 PFAM Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000000000000003165 222.0
PJD3_k127_6473101_5 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000003776 211.0
PJD3_k127_6473101_6 Large extracellular alpha-helical protein - - - 0.0000000000000000000000000000000000000005289 173.0
PJD3_k127_6489072_0 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 394.0
PJD3_k127_6489072_1 Leucine-rich repeat (LRR) protein - - - 0.000000000000000000000000000000000003285 155.0
PJD3_k127_6489072_3 Tetratricopeptide repeat - - - 0.00000001639 63.0
PJD3_k127_6489072_4 - - - - 0.0000181 55.0
PJD3_k127_6491254_0 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 1.076e-208 656.0
PJD3_k127_6491254_1 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002341 276.0
PJD3_k127_6491254_2 - - - - 0.0000000000000044 82.0
PJD3_k127_6512797_0 PFAM DNA RNA helicase, DEAD DEAH box type, N-terminal K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 589.0
PJD3_k127_6512797_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000003086 199.0
PJD3_k127_6512797_2 Methyltransferase type 11 K00570 - 2.1.1.17,2.1.1.71 0.000000000000000000000000000000000000006738 153.0
PJD3_k127_6512797_3 Belongs to the peptidase S26 family - - - 0.000000000000000000000000000001539 130.0
PJD3_k127_6512797_4 - - - - 0.0000000000000000000000003352 106.0
PJD3_k127_6531833_0 CarboxypepD_reg-like domain - - - 6.167e-249 784.0
PJD3_k127_6531833_1 Lipopolysaccharide-assembly, LptC-related - - - 0.000000000000000000000000000000004502 135.0
PJD3_k127_6531833_2 peptidyl-tyrosine sulfation - - - 0.00000000000000000000002762 106.0
PJD3_k127_6544939_0 Domain of unknown function (DUF3471) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005833 609.0
PJD3_k127_657455_0 prohibitin homologues K07192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 591.0
PJD3_k127_657455_1 Stage II sporulation protein M - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009149 411.0
PJD3_k127_657455_2 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000000000000000000000000005847 209.0
PJD3_k127_657455_3 cellulose binding - - - 0.00008184 55.0
PJD3_k127_658656_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 9.202e-248 777.0
PJD3_k127_658656_1 AMP-binding enzyme K01897 - 6.2.1.3 3.528e-247 775.0
PJD3_k127_658656_2 Amidohydrolase family - - - 5.041e-214 677.0
PJD3_k127_658656_3 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 6.214e-208 650.0
PJD3_k127_658656_4 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 515.0
PJD3_k127_658656_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000001458 187.0
PJD3_k127_661598_0 beta-1,4-mannooligosaccharide phosphorylase K20885,K21065 - 2.4.1.339,2.4.1.340,3.2.1.197 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008782 524.0
PJD3_k127_661598_1 dihydroorotase K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 517.0
PJD3_k127_661598_2 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 487.0
PJD3_k127_661598_3 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005948 398.0
PJD3_k127_661598_4 Ribosomal RNA adenine dimethylase - - - 0.00000000000000000000000000000000000000000000000000000003761 201.0
PJD3_k127_661598_5 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000001655 164.0
PJD3_k127_664210_0 Large extracellular alpha-helical protein - - - 1.159e-195 619.0
PJD3_k127_664210_1 DNA helicase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 385.0
PJD3_k127_664210_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 296.0
PJD3_k127_664210_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000009993 124.0
PJD3_k127_664210_4 Tetratricopeptide repeat - - - 0.00000000001699 76.0
PJD3_k127_680585_0 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004342 624.0
PJD3_k127_680585_1 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003918 270.0
PJD3_k127_680585_2 Laminin G domain - - - 0.00000000000009439 86.0
PJD3_k127_687539_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 450.0
PJD3_k127_687539_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000001387 162.0
PJD3_k127_687539_2 Hemerythrin HHE cation binding domain - - - 0.00000002113 62.0
PJD3_k127_697076_0 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007903 300.0
PJD3_k127_697076_1 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000000000000004883 152.0
PJD3_k127_697076_2 DNA-binding protein VF530 - - - 0.0000000000000000000009623 99.0
PJD3_k127_701630_0 of ABC transporters with duplicated ATPase K06158 - - 1.132e-270 838.0
PJD3_k127_701630_1 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000000000000005688 204.0
PJD3_k127_701630_2 lysyltransferase activity K07027 - - 0.000000000001237 74.0
PJD3_k127_708464_0 PspC domain K03973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000161 278.0
PJD3_k127_708464_1 Dual specificity phosphatase, catalytic domain - - - 0.0000000000000000000000000000000000000003432 154.0
PJD3_k127_708464_2 Low molecular weight phosphotyrosine protein phosphatase - - - 0.00000000000000000000000005109 110.0
PJD3_k127_732179_0 Peptidase family C25 - - - 1.315e-292 917.0
PJD3_k127_732179_1 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 591.0
PJD3_k127_732179_2 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006496 518.0
PJD3_k127_732179_3 YgbB family K01770 - 4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000009439 218.0
PJD3_k127_732179_4 PFAM Aminotransferase class I and II K00639,K00652 - 2.3.1.29,2.3.1.47 0.000002335 49.0
PJD3_k127_759971_0 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 9.158e-284 882.0
PJD3_k127_759971_1 LVIVD repeat - - - 9.932e-222 711.0
PJD3_k127_759971_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 492.0
PJD3_k127_759971_3 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 400.0
PJD3_k127_759971_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 343.0
PJD3_k127_759971_5 MORN repeat variant - - - 0.00000000000000000000000000000000000000000000000000000000000000000000131 243.0
PJD3_k127_759971_6 Polynucleotide kinase 3 phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000001842 199.0
PJD3_k127_759971_7 - - - - 0.000000000000000000000000000000000000000000000006994 180.0
PJD3_k127_770245_0 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006929 332.0
PJD3_k127_770245_1 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 306.0
PJD3_k127_770245_2 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000005382 160.0
PJD3_k127_773513_0 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001975 262.0
PJD3_k127_773513_1 PFAM TonB-dependent Receptor Plug K02014,K16089 - - 0.00000000000000000000000000000000000000000000000000000000000000001902 235.0
PJD3_k127_773513_2 Domain of unknown function (DUF5122) beta-propeller - - - 0.000000000000000000000001121 119.0
PJD3_k127_786466_0 Ribosomal protein S1-like RNA-binding domain K02945 - - 4.801e-267 826.0
PJD3_k127_786466_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001112 271.0
PJD3_k127_786466_2 AMP-binding enzyme K01911 - 6.2.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000003165 250.0
PJD3_k127_786466_3 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000000000000000000000000000000000000000000000000001236 218.0
PJD3_k127_786466_4 DnaJ-class molecular chaperone with C-terminal Zn finger domain - - - 0.0000000000000000000000000000000000000001764 160.0
PJD3_k127_786466_5 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.000000000000000000000000000000000001199 142.0
PJD3_k127_786466_6 Protein of unknown function, DUF255 - - - 0.000000000000000000000000000000000009418 140.0
PJD3_k127_790481_0 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 0.0 1030.0
PJD3_k127_790481_1 protein-glutamate methylesterase K00575,K13924 - 2.1.1.80,3.1.1.61 4.125e-286 900.0
PJD3_k127_790481_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 386.0
PJD3_k127_790481_3 chaperone DnaJ K03686,K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008901 328.0
PJD3_k127_790481_4 Sigma-54 interaction domain K00575 - 2.1.1.80 0.0000000000000000000000007572 122.0
PJD3_k127_790481_5 - - - - 0.00000000000001706 79.0
PJD3_k127_790481_6 - - - - 0.000000001255 62.0
PJD3_k127_792944_0 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 602.0
PJD3_k127_792944_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000395 258.0
PJD3_k127_792944_2 phosphorelay signal transduction system K13587 - 2.7.13.3 0.000000000000000001993 90.0
PJD3_k127_792944_3 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000002452 69.0
PJD3_k127_803020_0 Flavin containing amine oxidoreductase K09516 - 1.3.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 581.0
PJD3_k127_803020_1 Tryptophan halogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007383 367.0
PJD3_k127_803020_2 O-methyltransferase K07003 - - 0.000000000000000000000000000000000000000000001442 169.0
PJD3_k127_830750_0 POT family K03305 - - 1.702e-279 873.0
PJD3_k127_830750_1 TIGRFAM amino acid peptide transporter (Peptide H symporter), bacterial K03305 - - 2.742e-279 868.0
PJD3_k127_830750_2 Protein of unknown function (DUF819) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 524.0
PJD3_k127_830750_3 ABC-type multidrug transport system ATPase and permease K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 374.0
PJD3_k127_830750_4 Leukotriene A4 hydrolase, C-terminal - - - 0.0000000000000000000000003069 110.0
PJD3_k127_852817_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 344.0
PJD3_k127_856490_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 318.0
PJD3_k127_856490_1 cytochrome C peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007915 309.0
PJD3_k127_856490_2 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005336 260.0
PJD3_k127_877507_0 PFAM 2Fe-2S iron-sulfur cluster binding domain K02613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 387.0
PJD3_k127_877507_1 PFAM 2Fe-2S iron-sulfur cluster binding domain K02613 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 319.0
PJD3_k127_877507_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000004625 172.0
PJD3_k127_887295_0 Carboxypeptidase regulatory-like domain - - - 0.0 1024.0
PJD3_k127_887295_1 AAA domain - - - 5.868e-195 648.0
PJD3_k127_887295_2 Saccharopine dehydrogenase C-terminal domain K00290,K00293 - 1.5.1.10,1.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007078 560.0
PJD3_k127_887295_3 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005469 543.0
PJD3_k127_887295_4 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036 398.0
PJD3_k127_887295_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001747 257.0
PJD3_k127_887295_6 protein CHP03519, membrane, Bacteroidetes - - - 0.00000000000000000000000000000000000000000000002615 183.0
PJD3_k127_887295_7 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000002686 189.0
PJD3_k127_887295_8 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000007628 145.0
PJD3_k127_896380_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 3.666e-280 878.0
PJD3_k127_896380_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 519.0
PJD3_k127_896380_2 ATPase domain of DNA mismatch repair MUTS family - - - 0.000000000000000000000000000000000000000002584 163.0
PJD3_k127_898472_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1226.0
PJD3_k127_910822_0 PFAM Enoyl-CoA hydratase isomerase - - - 3.899e-198 637.0
PJD3_k127_910822_1 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 405.0
PJD3_k127_910822_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000005099 197.0
PJD3_k127_910822_3 PFAM BadF BadG BcrA BcrD ATPase family - - - 0.000000000000000000000000000000000000002484 167.0
PJD3_k127_910822_4 - - - - 0.0004594 51.0
PJD3_k127_921821_0 Exonuclease VII, large subunit K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 408.0
PJD3_k127_921821_1 SCO1/SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000000000001451 214.0
PJD3_k127_921821_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000001143 115.0
PJD3_k127_921821_3 exodeoxyribonuclease VII activity K03602 - 3.1.11.6 0.0000000000000000005213 87.0
PJD3_k127_922193_0 Pfam:DUF3308 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009758 340.0
PJD3_k127_922193_1 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001501 287.0
PJD3_k127_922193_2 C-terminal domain of CHU protein family - - - 0.000000000000000002446 87.0
PJD3_k127_922193_3 SprB repeat - - - 0.0000001718 64.0
PJD3_k127_936056_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009657 353.0
PJD3_k127_936056_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001547 265.0
PJD3_k127_936056_2 Multicopper oxidase - - - 0.00000000000000000000000000000001345 141.0
PJD3_k127_936056_3 - - - - 0.00000000000001603 76.0
PJD3_k127_936056_5 Multicopper oxidase K22349 - 1.16.3.3 0.00001441 56.0
PJD3_k127_939230_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1236.0
PJD3_k127_939230_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 7.206e-267 826.0
PJD3_k127_939230_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 3.381e-220 691.0
PJD3_k127_939230_3 - - - - 0.000000000000000000000000000000000000007168 149.0
PJD3_k127_939230_4 membrane - - - 0.000000000000000000000000000000000001798 151.0
PJD3_k127_939230_5 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000000000000008017 115.0
PJD3_k127_939230_6 Gliding motility protein - - - 0.000000000000000000000004626 115.0
PJD3_k127_952058_0 Belongs to the peptidase S8 family K00368 - 1.7.2.1 0.0 1096.0
PJD3_k127_952058_1 D-alanine [D-alanyl carrier protein] ligase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 574.0
PJD3_k127_952058_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000185 214.0
PJD3_k127_953166_0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00123,K18332 - 1.12.1.3,1.17.1.9 0.0 1410.0
PJD3_k127_953166_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 7.199e-227 717.0
PJD3_k127_953166_2 FdhD/NarQ family K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 368.0
PJD3_k127_953166_3 membrane protein involved in D-alanine export - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 363.0
PJD3_k127_953166_4 S4 RNA-binding domain K06182 - 5.4.99.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006181 287.0
PJD3_k127_953166_5 PFAM Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001385 245.0
PJD3_k127_953166_6 - - - - 0.000000000000000000004181 98.0
PJD3_k127_957893_0 ABC transporter C-terminal domain K15738 - - 2.986e-293 910.0
PJD3_k127_957893_1 Phosphinothricin acetyltransferase K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000000000000000000000000000003087 252.0
PJD3_k127_957893_2 transcriptional regulator K03719,K05800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002971 240.0
PJD3_k127_957893_3 - - - - 0.0000000000000000000000000000000000000001751 154.0
PJD3_k127_957893_4 decarboxylase K01585 - 4.1.1.19 0.0000000000000000000000000000000008321 134.0
PJD3_k127_957893_6 - - - - 0.0000000000000000008079 87.0
PJD3_k127_957893_7 peptidase M1 K01256 - 3.4.11.2 0.000000000000000001705 88.0
PJD3_k127_957893_9 Domain of unknown function (DUF4293) - - - 0.00000007933 60.0
PJD3_k127_968481_0 Helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 364.0
PJD3_k127_968481_1 ATPases associated with a variety of cellular activities K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000007743 239.0
PJD3_k127_968481_2 ribonuclease BN K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000008849 237.0
PJD3_k127_983915_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 1.439e-219 687.0
PJD3_k127_983915_1 Leukotriene A4 hydrolase, C-terminal - - - 1.071e-197 627.0
PJD3_k127_983915_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003203 255.0
PJD3_k127_985014_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005894 446.0
PJD3_k127_985014_1 Mur ligase family, catalytic domain K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000515 276.0
PJD3_k127_985014_2 Cell division protein K03589 - - 0.00000000000000000000000000000000000000000000000000000000000002652 224.0