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Overview

ID MAG02940
Name PJD3_bin.36
Sample SMP0069
Taxonomy
Kingdom Bacteria
Phylum Gemmatimonadota
Class Gemmatimonadetes
Order Gemmatimonadales
Family GWC2-71-9
Genus JABDII01
Species JABDII01 sp035464955
Assembly information
Completeness (%) 70.26
Contamination (%) 2.01
GC content (%) 65.0
N50 (bp) 6,309
Genome size (bp) 2,400,360

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2305

Gene name Description KEGG GOs EC E-value Score Sequence
PJD3_k127_1003859_0 Contains 3'-5'exonuclease domain K02342 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0016020,GO:0030312,GO:0032991,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071944,GO:1902494,GO:1905347,GO:1905348,GO:1990391 2.7.7.7 0.0000005519 57.0
PJD3_k127_1003859_1 Belongs to the AAA ATPase family K13525 - - 0.00001129 57.0
PJD3_k127_1011705_0 Glycosyl transferases group 1 K13057 - 2.4.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 533.0
PJD3_k127_1011705_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008072 489.0
PJD3_k127_1011705_10 PFAM KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000001173 149.0
PJD3_k127_1011705_11 - - - - 0.00000007064 64.0
PJD3_k127_1011705_2 PFAM Glycosyl transferase, family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 472.0
PJD3_k127_1011705_3 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 312.0
PJD3_k127_1011705_4 Glucokinase K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001097 291.0
PJD3_k127_1011705_5 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 GO:0000287,GO:0003674,GO:0003824,GO:0004805,GO:0005488,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009266,GO:0009311,GO:0009312,GO:0009409,GO:0009628,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0033554,GO:0034637,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0046351,GO:0046872,GO:0050896,GO:0051716,GO:0070413,GO:0070415,GO:0070417,GO:0071704,GO:1901576 3.1.3.12 0.0000000000000000000000000000000000000000000000000000000000000001443 230.0
PJD3_k127_1011705_6 Acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000001432 207.0
PJD3_k127_1011705_7 Methyltransferase domain K15256 - - 0.00000000000000000000000000000000000000008738 170.0
PJD3_k127_1011705_8 Pyridoxamine 5'-phosphate oxidase K00275 - 1.4.3.5 0.000000000000000000000000000000000001225 146.0
PJD3_k127_1011705_9 Putative heavy-metal-binding - - - 0.000000000000000000000000000000000001571 141.0
PJD3_k127_1015221_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000298 271.0
PJD3_k127_1015221_1 histidine kinase A domain protein - - - 0.0000000211 65.0
PJD3_k127_101621_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005362 302.0
PJD3_k127_101621_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000002989 232.0
PJD3_k127_101621_2 KamA family K01843 - 5.4.3.2 0.000000000000003052 79.0
PJD3_k127_1033800_0 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 394.0
PJD3_k127_1033800_1 Peptidase family M54 K06974 - - 0.0000000000000000000000000000000000000000429 157.0
PJD3_k127_1033800_2 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000002001 90.0
PJD3_k127_1033800_3 Sigma-54 interaction domain - - - 0.000000000000273 70.0
PJD3_k127_1036134_0 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008297 340.0
PJD3_k127_1036134_1 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002056 271.0
PJD3_k127_1036134_2 virion core protein (lumpy skin disease virus) - - - 0.0002533 49.0
PJD3_k127_1052344_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 7.017e-251 799.0
PJD3_k127_1052344_1 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000004605 53.0
PJD3_k127_1057658_0 glycosyltransferase 36 associated K00702,K13688 - 2.4.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007652 368.0
PJD3_k127_1058917_0 Bacterial regulatory protein, Fis family - - - 3.217e-214 679.0
PJD3_k127_1058917_1 Beta-eliminating lyase K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 557.0
PJD3_k127_1058917_2 AMP-binding enzyme C-terminal domain K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 514.0
PJD3_k127_1058917_3 Zinc-binding dehydrogenase K00060 - 1.1.1.103 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 414.0
PJD3_k127_1058917_4 OST-HTH/LOTUS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 404.0
PJD3_k127_1058917_5 Formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005852 354.0
PJD3_k127_1058917_6 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002099 253.0
PJD3_k127_1058917_7 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000003365 221.0
PJD3_k127_1058917_8 Belongs to the DNA glycosylase MPG family K03652 GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 0.00000000000000000000000000000000000000000001086 172.0
PJD3_k127_1058917_9 Chain length determinant protein K16554 - - 0.00000000000002895 78.0
PJD3_k127_1064603_0 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.000000000000000000000000000000000000000000000000000000000000000004144 231.0
PJD3_k127_1064603_1 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000002136 235.0
PJD3_k127_1064603_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000004517 153.0
PJD3_k127_1064603_3 Amidinotransferase K01478 - 3.5.3.6 0.0000000000000001738 85.0
PJD3_k127_1074223_0 C4-dicarboxylate anaerobic carrier - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 385.0
PJD3_k127_1074223_1 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 332.0
PJD3_k127_1074223_2 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000008514 235.0
PJD3_k127_1074223_3 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000659 183.0
PJD3_k127_1074223_4 - - - - 0.000000000000000000007812 94.0
PJD3_k127_1075792_0 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008479 622.0
PJD3_k127_1075792_1 CoA binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004695 556.0
PJD3_k127_1075792_2 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 395.0
PJD3_k127_1075792_3 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001113 291.0
PJD3_k127_1075792_4 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000004095 157.0
PJD3_k127_1083892_0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 441.0
PJD3_k127_1083892_1 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000001061 62.0
PJD3_k127_1083892_2 PFAM KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.00002868 47.0
PJD3_k127_1087506_0 Cellulose biosynthesis protein BcsQ - - - 0.000000000000003003 78.0
PJD3_k127_1090476_0 Branched-chain amino acid transport system / permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 321.0
PJD3_k127_1090476_1 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 312.0
PJD3_k127_1090476_2 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 289.0
PJD3_k127_1090476_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000001683 246.0
PJD3_k127_1090476_4 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000005732 213.0
PJD3_k127_1090476_5 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000001196 224.0
PJD3_k127_1090476_6 Domain of unknown function (DUF4112) - - - 0.000000000000000000000000000000000001276 144.0
PJD3_k127_1090476_7 Cytochrome c - - - 0.000000000000000000000000000000001288 134.0
PJD3_k127_1101810_0 PFAM Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000006684 196.0
PJD3_k127_1101810_1 Phosphoglycerate mutase - - - 0.0000000000000000000000000000000000000000000000001117 186.0
PJD3_k127_110279_0 FeoA - - - 6.362e-308 960.0
PJD3_k127_110279_1 iron ion homeostasis K03322,K03709,K04758 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004825 284.0
PJD3_k127_1108920_0 TIGRFAM PQQ-dependent dehydrogenase, methanol ethanol family K17760 - 1.1.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 465.0
PJD3_k127_1108920_1 synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 436.0
PJD3_k127_1108920_2 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 433.0
PJD3_k127_1108920_3 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 406.0
PJD3_k127_1108920_4 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008292 276.0
PJD3_k127_1108920_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002269 241.0
PJD3_k127_1108920_6 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000004954 209.0
PJD3_k127_1108920_7 SprT-like family - - - 0.00000000000000000000000000000000000000000000002551 185.0
PJD3_k127_1108920_8 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000000000000001914 180.0
PJD3_k127_1108920_9 4Fe-4S dicluster domain K02573 - - 0.00000000000000000004177 94.0
PJD3_k127_1112180_0 type II secretion system protein E K02283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008944 291.0
PJD3_k127_1133029_0 NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000001006 248.0
PJD3_k127_1133029_1 CAAX protease self-immunity K07052 - - 0.00007745 55.0
PJD3_k127_1157218_0 long-chain fatty acid transport protein K06076 - - 0.000000000000000000001092 103.0
PJD3_k127_1157218_1 long-chain fatty acid transport protein K06076 - - 0.000000000000000002357 91.0
PJD3_k127_1180855_0 protein kinase activity - - - 0.00000000000000000000000000001601 136.0
PJD3_k127_1190838_0 RmlD substrate binding domain K01784,K02473,K03274,K08678 - 4.1.1.35,5.1.3.2,5.1.3.20,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 308.0
PJD3_k127_1190838_1 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000003224 190.0
PJD3_k127_1190838_2 VanZ like family - - - 0.00000000000000000000000000000000000537 152.0
PJD3_k127_1198408_0 COG NOG14600 non supervised orthologous group - - - 0.000000000000000000000000000000000000000000000000005699 182.0
PJD3_k127_1198408_1 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000797 61.0
PJD3_k127_119916_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 332.0
PJD3_k127_119916_1 integral membrane protein K07027 - - 0.0000005342 57.0
PJD3_k127_1224851_0 Glycogen debranching enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000005632 231.0
PJD3_k127_1224851_1 Phospholipid methyltransferase - - - 0.00000000000000000001553 100.0
PJD3_k127_1225018_0 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000013 225.0
PJD3_k127_1225018_1 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000008301 209.0
PJD3_k127_1231989_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 523.0
PJD3_k127_1231989_1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00263 - 1.4.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 476.0
PJD3_k127_1231989_10 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000004974 100.0
PJD3_k127_1231989_11 Histidine kinase - - - 0.00005282 56.0
PJD3_k127_1231989_2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006139 402.0
PJD3_k127_1231989_3 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000003724 242.0
PJD3_k127_1231989_4 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000165 190.0
PJD3_k127_1231989_5 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000009484 186.0
PJD3_k127_1231989_6 - - - - 0.000000000000000000000000000000001181 134.0
PJD3_k127_1231989_7 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000001671 129.0
PJD3_k127_1231989_8 - - - - 0.0000000000000000000000000008672 114.0
PJD3_k127_1231989_9 BioY family K03523 - - 0.0000000000000000000001796 104.0
PJD3_k127_1251730_0 polysaccharide catabolic process K01179,K22278 - 3.2.1.4,3.5.1.104 0.00000000000000000000000000000000000000000000000000000003101 209.0
PJD3_k127_1257398_0 GNAT family acetyltransferase K03802 - 6.3.2.29,6.3.2.30 0.0 1299.0
PJD3_k127_1257398_1 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 3.265e-274 857.0
PJD3_k127_1257398_2 Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation K01305 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008270,GO:0008798,GO:0016787,GO:0019538,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 496.0
PJD3_k127_1257398_3 Mur ligase family, glutamate ligase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 456.0
PJD3_k127_1257398_4 Peptidase family S51 K13282 - 3.4.15.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 337.0
PJD3_k127_1257398_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000004692 134.0
PJD3_k127_1263171_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000006349 116.0
PJD3_k127_1263171_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.0002779 53.0
PJD3_k127_1271675_0 TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000004113 234.0
PJD3_k127_1271675_1 - - - - 0.000000000000000009341 96.0
PJD3_k127_1271675_2 - - - - 0.0000001414 62.0
PJD3_k127_1277000_0 Amidohydrolase family K01468 - 3.5.2.7 0.00000000000000000000000000000001949 128.0
PJD3_k127_1277000_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 - 0.000000000000421 70.0
PJD3_k127_1284496_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 437.0
PJD3_k127_1284496_1 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000005776 189.0
PJD3_k127_1284496_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000002581 151.0
PJD3_k127_1284496_3 - - - - 0.00000000000000000000000000000000000009032 155.0
PJD3_k127_1284496_4 Putative adhesin - - - 0.000000000000000000000006497 113.0
PJD3_k127_1284496_5 - - - - 0.00000000000007026 82.0
PJD3_k127_1284516_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000002094 169.0
PJD3_k127_1287117_0 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000001065 78.0
PJD3_k127_1302701_0 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 409.0
PJD3_k127_1302701_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003894 299.0
PJD3_k127_1302701_2 diguanylate cyclase - - - 0.0000000000000000000000000000000000003284 157.0
PJD3_k127_1302701_3 HD domain - - - 0.00000000000000001068 91.0
PJD3_k127_1306579_0 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 504.0
PJD3_k127_1320355_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 469.0
PJD3_k127_1320355_1 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000004218 120.0
PJD3_k127_1320355_2 NlpC/P60 family K21471 - - 0.00000000000000000000000007414 119.0
PJD3_k127_1320355_3 Protein of unknown function (DUF1207) - - - 0.00000000000005698 82.0
PJD3_k127_1331873_0 PFAM oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 389.0
PJD3_k127_1331873_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000003995 83.0
PJD3_k127_1338281_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 418.0
PJD3_k127_1338281_1 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 329.0
PJD3_k127_1338281_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 312.0
PJD3_k127_1338281_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000006384 267.0
PJD3_k127_1338281_4 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000452 228.0
PJD3_k127_1338281_5 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000000000000004272 152.0
PJD3_k127_1338281_6 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000134 153.0
PJD3_k127_1339556_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 3.29e-197 621.0
PJD3_k127_1339556_1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 503.0
PJD3_k127_1370097_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 7.113e-311 957.0
PJD3_k127_1370097_1 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006858 510.0
PJD3_k127_1370097_2 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 428.0
PJD3_k127_1370097_3 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 420.0
PJD3_k127_1399189_0 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007776 296.0
PJD3_k127_1399189_1 Belongs to the pirin family K06911 - - 0.000000001254 67.0
PJD3_k127_1399562_0 Ketoacyl-synthetase C-terminal extension - - - 0.0 2837.0
PJD3_k127_1399562_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 6.446e-224 706.0
PJD3_k127_1399562_2 4'-phosphopantetheinyl transferase superfamily K06133 - - 0.0000000000000000000000000000000298 135.0
PJD3_k127_1399562_3 xylan catabolic process K09252 - 3.1.1.73 0.000000000000000000000001429 109.0
PJD3_k127_1401755_0 Permease for cytosine/purines, uracil, thiamine, allantoin K03457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 556.0
PJD3_k127_1401755_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005527 507.0
PJD3_k127_1401755_2 COG0493 NADPH-dependent glutamate synthase beta chain and related K17722 - 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003509 434.0
PJD3_k127_1401755_3 Carbon-nitrogen hydrolase K01431,K12251 - 3.5.1.53,3.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001239 278.0
PJD3_k127_1407347_0 Part of the ABC transporter complex WtpABC involved in molybdate tungstate import. Responsible for energy coupling to the transport system (By similarity) K02017,K02062,K15497 - 3.6.3.29,3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000002693 274.0
PJD3_k127_1407347_1 IMS family HHH motif K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000001469 256.0
PJD3_k127_1407347_2 PFAM Binding-protein-dependent transport system inner membrane component K02046,K15496 - - 0.00000000000004698 74.0
PJD3_k127_145219_0 Type III restriction enzyme, res subunit K01156 - 3.1.21.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 441.0
PJD3_k127_1461765_0 Flavin containing amine oxidoreductase K01854 - 5.4.99.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 553.0
PJD3_k127_1461765_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 336.0
PJD3_k127_1461765_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003508 285.0
PJD3_k127_1461765_3 PFAM glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002208 269.0
PJD3_k127_1461765_4 lysyltransferase activity - - - 0.000000000000000000000000000000000000000000000000002026 196.0
PJD3_k127_1461765_5 - K14340 - - 0.0000000000000000000000000000000000001747 154.0
PJD3_k127_1461765_6 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000007486 133.0
PJD3_k127_1461765_7 - - - - 0.000000000000000000000000000002331 137.0
PJD3_k127_1461765_8 choline dehydrogenase activity - - - 0.00000000000000000000000001822 121.0
PJD3_k127_1467763_0 Acetyltransferase (GNAT) family K00619 GO:0003674,GO:0003824,GO:0004042,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016043,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0040007,GO:0042450,GO:0042802,GO:0042803,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004982 304.0
PJD3_k127_1467763_1 NlpC/P60 family K21471 - - 0.00000000000000000000000000000000000000000000000007264 184.0
PJD3_k127_1481346_0 glucose-methanol-choline oxidoreductase K19813 - 1.1.5.9 0.0000000000000000000000000000000000000000000000000000000000000000000006984 244.0
PJD3_k127_1481346_1 oxidoreductase - - - 0.00000111 51.0
PJD3_k127_1481346_2 Membrane bound FAD containing D-sorbitol dehydrogenase - - - 0.00009486 53.0
PJD3_k127_1498863_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 511.0
PJD3_k127_1498863_1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 445.0
PJD3_k127_1498863_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 342.0
PJD3_k127_1498863_3 Surface antigen K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 317.0
PJD3_k127_1498863_4 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008147 307.0
PJD3_k127_1498863_5 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008721 309.0
PJD3_k127_1498863_6 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000101 265.0
PJD3_k127_1498863_7 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000003279 218.0
PJD3_k127_1498863_8 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000000000005087 145.0
PJD3_k127_1498863_9 Outer membrane protein (OmpH-like) K06142 - - 0.000000000000000000001541 101.0
PJD3_k127_1500704_0 Aromatic amino acid lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 443.0
PJD3_k127_1500704_1 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 464.0
PJD3_k127_1500704_10 cellulase activity K06882 - - 0.0000000000001239 83.0
PJD3_k127_1500704_11 Protein tyrosine kinase - - - 0.000000000006651 75.0
PJD3_k127_1500704_2 Polyprenyl synthetase K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007687 353.0
PJD3_k127_1500704_3 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 306.0
PJD3_k127_1500704_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002419 289.0
PJD3_k127_1500704_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000001223 184.0
PJD3_k127_1500704_6 OmpA family K03640 - - 0.0000000000000000000000000000000000000004288 156.0
PJD3_k127_1500704_7 TonB C terminal K03832 - - 0.0000000000000000000000000008457 118.0
PJD3_k127_1500704_8 Domain of unknown function (DUF4321) - - - 0.000000000000000000001678 96.0
PJD3_k127_1500704_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000007844 74.0
PJD3_k127_1501871_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004959 497.0
PJD3_k127_1501871_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 420.0
PJD3_k127_1501871_10 Belongs to the CarB family K01955 - 6.3.5.5 0.0000000000000000002228 90.0
PJD3_k127_1501871_11 Ribosomal protein L36 K02919 - - 0.00000000000001031 73.0
PJD3_k127_1501871_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009703 302.0
PJD3_k127_1501871_3 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001331 283.0
PJD3_k127_1501871_4 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000002196 209.0
PJD3_k127_1501871_5 RmlD substrate binding domain K15856 - 1.1.1.281 0.00000000000000000000000000000000000000000000000000000000003811 222.0
PJD3_k127_1501871_6 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000000008916 202.0
PJD3_k127_1501871_7 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000001862 179.0
PJD3_k127_1501871_8 Ribosomal protein L17 K02879 - - 0.0000000000000000000000000000000000000005341 153.0
PJD3_k127_1501871_9 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000783 93.0
PJD3_k127_1503859_0 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007645 365.0
PJD3_k127_1503859_1 Oligopeptide/dipeptide transporter, C-terminal region K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 340.0
PJD3_k127_1503859_2 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000008263 249.0
PJD3_k127_1503859_3 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000001095 246.0
PJD3_k127_1513917_0 Metallopeptidase family M24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007286 335.0
PJD3_k127_1513917_1 - - - - 0.000000000000000000000002584 112.0
PJD3_k127_1513917_2 PFAM TonB-dependent Receptor Plug - - - 0.0000000000002716 81.0
PJD3_k127_1545523_0 sterol desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 340.0
PJD3_k127_1545523_1 Predicted metal-dependent hydrolase K07044 - - 0.0000003589 57.0
PJD3_k127_1550854_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 329.0
PJD3_k127_1550854_1 PTS system mannose/fructose/sorbose family IID component K02796 - - 0.0000000000000000000000000000000015 144.0
PJD3_k127_1550854_2 Phosphotransferase System K11189 - - 0.00000000000000000003905 99.0
PJD3_k127_1550854_3 PTS system sorbose-specific iic component K02795 - - 0.000001493 56.0
PJD3_k127_1551461_0 OmpA family - - - 0.0000000000000000000000000000000000000000000082 185.0
PJD3_k127_1552420_0 Peptidase family U32 K08303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000517 411.0
PJD3_k127_1552420_1 Peptidase family U32 K08303 - - 0.00000000004425 67.0
PJD3_k127_1587066_0 heme binding - - - 0.0000000000000000000000000000000000000000000000000000000001053 215.0
PJD3_k127_1587066_1 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000001436 80.0
PJD3_k127_1594719_0 Domain of unknown function (DUF4157) - - - 0.000000000000000000000000000000000000000002344 160.0
PJD3_k127_1603288_0 Zn_pept - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005627 434.0
PJD3_k127_1603288_1 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 411.0
PJD3_k127_1603288_2 Sugar (and other) transporter K08151 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002347 261.0
PJD3_k127_1603288_3 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000706 227.0
PJD3_k127_1603288_4 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000004466 207.0
PJD3_k127_1603288_5 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000004519 124.0
PJD3_k127_1603288_6 LVIVD repeat - - - 0.00000000000000000000006415 107.0
PJD3_k127_1603288_7 Copper binding proteins, plastocyanin/azurin family K02638 - - 0.00000000000002537 82.0
PJD3_k127_1606234_0 Diguanylate cyclase, GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 328.0
PJD3_k127_1606234_1 PFAM Sodium calcium exchanger protein K07300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 319.0
PJD3_k127_1606234_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002354 261.0
PJD3_k127_1606234_3 Trm112p-like protein K09791 - - 0.0000000000000000002832 89.0
PJD3_k127_1606234_4 - - - - 0.0000000001329 64.0
PJD3_k127_1606234_5 - - - - 0.000004035 51.0
PJD3_k127_1607258_0 Malate synthase K01638 - 2.3.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005109 539.0
PJD3_k127_1608209_0 depolymerase K03932 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 320.0
PJD3_k127_1626986_0 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000866 327.0
PJD3_k127_1626986_1 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005685 278.0
PJD3_k127_1626986_2 Ferric reductase like transmembrane component - - - 0.00000000000000000000000000000000000000000000000000000003926 201.0
PJD3_k127_1626986_3 - - - - 0.000000000001678 72.0
PJD3_k127_1626986_4 - - - - 0.00000000007846 64.0
PJD3_k127_1631278_0 serine-type peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000009235 243.0
PJD3_k127_1631278_1 Glyoxalase-like domain K06996 - - 0.000000000000000000000000000000000000000000001527 168.0
PJD3_k127_1631278_2 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000132 128.0
PJD3_k127_1643279_0 TcpE family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001923 240.0
PJD3_k127_1643279_1 - - - - 0.0000000000000000000000000000000000000002877 151.0
PJD3_k127_1643279_2 Conjugative transposon protein TcpC - - - 0.000000000000000000000000000005534 121.0
PJD3_k127_1646396_0 Endonuclease V K05982 - 3.1.21.7 0.000000000000000000000000000000000000000000000000000000000000001063 226.0
PJD3_k127_1646396_1 - - - - 0.000000000000005091 80.0
PJD3_k127_1646396_2 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000002006 66.0
PJD3_k127_1672528_0 peptidase activity, acting on L-amino acid peptides K01187,K01448,K07752 - 3.2.1.20,3.4.17.22,3.5.1.28 0.0000000005936 68.0
PJD3_k127_1672528_1 Uncharacterised protein family (UPF0093) K08973 - - 0.000009598 49.0
PJD3_k127_1677913_0 Isocitrate lyase K01637 GO:0003674,GO:0003824,GO:0004451,GO:0005488,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046487,GO:0071704 4.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 446.0
PJD3_k127_1692746_0 serine-type peptidase activity - - - 3.57e-203 646.0
PJD3_k127_1692746_1 Belongs to the argininosuccinate synthase family. Type K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 338.0
PJD3_k127_1692746_2 BNR repeat-containing family member - - - 0.0000000000000000000000000000000000005218 146.0
PJD3_k127_1700165_0 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000005199 218.0
PJD3_k127_1700502_0 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007723 489.0
PJD3_k127_1700502_1 cytochrome c oxidase subunit I K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 480.0
PJD3_k127_1700502_2 Lysine 2,3-aminomutase YodO family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 426.0
PJD3_k127_1700502_3 mitochondrial respiratory chain complex IV assembly K14998 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0030312,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0051704,GO:0071944 - 0.00000000000000000000000000000000006041 143.0
PJD3_k127_1700502_4 polysaccharide biosynthetic process K03379 - 1.14.13.22 0.00000000000000000222 98.0
PJD3_k127_1700502_5 (ABC) transporter - - - 0.000000000008611 77.0
PJD3_k127_1700502_6 PFAM Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0000000118 62.0
PJD3_k127_1700502_7 Transglutaminase-like superfamily - - - 0.00007543 51.0
PJD3_k127_1700978_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 582.0
PJD3_k127_1700978_1 phosphoribosyltransferase K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006887 254.0
PJD3_k127_1700978_2 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000007434 207.0
PJD3_k127_1700978_3 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000001401 203.0
PJD3_k127_1700978_4 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000000000001476 87.0
PJD3_k127_1700978_5 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000003049 85.0
PJD3_k127_1702649_0 converts alpha-aldose to the beta-anomer - - - 0.000000000000000000000000000001186 124.0
PJD3_k127_1702649_1 Periplasmic copper-binding protein (NosD) - - - 0.0000004967 61.0
PJD3_k127_1702649_2 Parallel beta-helix repeats - - - 0.0001414 53.0
PJD3_k127_1709511_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.74e-313 979.0
PJD3_k127_1709511_1 amine dehydrogenase activity K15864 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1,1.7.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 609.0
PJD3_k127_1709511_2 Outer membrane protein beta-barrel family K16087,K16092 - - 0.00000000000000000000000000000000000000000000000006937 203.0
PJD3_k127_1709511_3 Sodium/hydrogen exchanger family K03455 - - 0.000000000000000000000000000000000000000000000398 171.0
PJD3_k127_1709511_4 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000000000000000004514 184.0
PJD3_k127_1709511_5 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane K08720,K18093 - - 0.000000000000000000000000000000000000000569 164.0
PJD3_k127_1713956_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 330.0
PJD3_k127_1713956_1 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000000000000000000366 208.0
PJD3_k127_1713956_2 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000001029 174.0
PJD3_k127_1713956_3 PFAM DSBA oxidoreductase - - - 0.000000000000000000000000000000002994 144.0
PJD3_k127_1731628_0 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002532 283.0
PJD3_k127_1731628_1 peptidyl-tyrosine sulfation - - - 0.00000000000006837 86.0
PJD3_k127_1731628_2 peptidyl-tyrosine sulfation - - - 0.0000168 58.0
PJD3_k127_1738063_0 AcrB/AcrD/AcrF family K07787,K15726 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008014 490.0
PJD3_k127_1738063_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007218 336.0
PJD3_k127_1757251_0 Heparinase II/III-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 445.0
PJD3_k127_1757251_1 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 334.0
PJD3_k127_1757251_2 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001052 292.0
PJD3_k127_1757251_3 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000009965 212.0
PJD3_k127_1757251_4 DoxX K15977 - - 0.0000000000000000000000000000000000000000000004908 170.0
PJD3_k127_1757251_5 light absorption - - - 0.00000000000000000000000000000000000005338 145.0
PJD3_k127_1757251_6 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000003646 139.0
PJD3_k127_1774294_0 tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007635 575.0
PJD3_k127_1774294_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007439 565.0
PJD3_k127_1774294_10 Domain of unknown function (DUF1844) - - - 0.000003059 53.0
PJD3_k127_1774294_2 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000827 464.0
PJD3_k127_1774294_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 309.0
PJD3_k127_1774294_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 298.0
PJD3_k127_1774294_5 MazG nucleotide pyrophosphohydrolase domain K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000008844 258.0
PJD3_k127_1774294_6 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000000000000000000003194 188.0
PJD3_k127_1774294_7 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.0000000000000000000000000000002912 126.0
PJD3_k127_1774294_8 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000008514 98.0
PJD3_k127_1774294_9 COG1520 FOG WD40-like repeat - - - 0.0000000000000001214 92.0
PJD3_k127_177700_0 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 339.0
PJD3_k127_177700_1 GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005478 275.0
PJD3_k127_177700_2 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000002525 215.0
PJD3_k127_177700_3 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000002932 190.0
PJD3_k127_177700_4 - - - - 0.000000000000000003819 91.0
PJD3_k127_177700_5 Peptidase family M23 - - - 0.00000000000007529 85.0
PJD3_k127_1779794_0 UTP--glucose-1-phosphate uridylyltransferase - - - 1.234e-254 797.0
PJD3_k127_1846106_0 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007481 320.0
PJD3_k127_1846106_1 - - - - 0.00000000000000000000000000000000001653 143.0
PJD3_k127_1846106_2 GAF domain - - - 0.000000000000000000000000005096 128.0
PJD3_k127_1846106_3 Histidine kinase - - - 0.0000000002339 74.0
PJD3_k127_1879214_0 3' exoribonuclease, RNase T-like K03656,K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 419.0
PJD3_k127_1879214_1 PFAM blue (type 1) copper domain protein K00368,K02638 - 1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000002071 263.0
PJD3_k127_1879214_2 Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000001042 226.0
PJD3_k127_1879214_3 peptidyl-tyrosine sulfation K13992 - - 0.00000000000000000000000000000000000000000000004118 180.0
PJD3_k127_1879214_4 negative regulation of transcription, DNA-templated - GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006950,GO:0006974,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000008474 140.0
PJD3_k127_1879214_5 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000000000000357 86.0
PJD3_k127_1879214_7 Copper binding proteins, plastocyanin/azurin family - - - 0.000000004335 68.0
PJD3_k127_1879214_8 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.00000007397 64.0
PJD3_k127_1879214_9 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.0000005282 62.0
PJD3_k127_1889896_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 2.607e-237 754.0
PJD3_k127_1889896_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003976 406.0
PJD3_k127_1889896_2 Competence-damaged protein K03742 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006668 281.0
PJD3_k127_1889896_3 membrane K08972 - - 0.000000000000000000000001781 107.0
PJD3_k127_1889896_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000004215 113.0
PJD3_k127_1889896_5 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000001863 88.0
PJD3_k127_1889897_0 acetyltransferase - - - 0.0000000000000000000000005899 110.0
PJD3_k127_1903387_0 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001161 271.0
PJD3_k127_1903387_1 FR47-like protein - - - 0.00000000000001605 76.0
PJD3_k127_1907960_0 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 433.0
PJD3_k127_1907960_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000001006 115.0
PJD3_k127_1924940_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 432.0
PJD3_k127_1924940_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000001083 124.0
PJD3_k127_1924940_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000003373 51.0
PJD3_k127_1934402_0 membrane organization - - - 1.274e-228 736.0
PJD3_k127_1934402_1 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005785 451.0
PJD3_k127_1934402_10 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000001447 230.0
PJD3_k127_1934402_11 Mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000002729 206.0
PJD3_k127_1934402_12 OsmC-like protein K06889,K07397 - - 0.000000000000000000000000000000000000000000000000000001374 195.0
PJD3_k127_1934402_13 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000002483 196.0
PJD3_k127_1934402_14 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000001172 177.0
PJD3_k127_1934402_15 - - - - 0.0000000000000000000000000000000000000000000003881 185.0
PJD3_k127_1934402_16 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000002438 136.0
PJD3_k127_1934402_17 BFD-like [2Fe-2S] binding domain - - - 0.0000000002302 63.0
PJD3_k127_1934402_2 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 438.0
PJD3_k127_1934402_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007519 411.0
PJD3_k127_1934402_4 Elongation factor G, domain IV K02355 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 337.0
PJD3_k127_1934402_5 Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 296.0
PJD3_k127_1934402_6 OsmC-like protein K06889,K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000577 286.0
PJD3_k127_1934402_7 Cytidylate kinase K00876 - 2.7.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000004125 248.0
PJD3_k127_1934402_8 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000009053 233.0
PJD3_k127_1934402_9 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000007202 216.0
PJD3_k127_1934874_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 584.0
PJD3_k127_1934874_1 Part of a membrane complex involved in electron transport K03615 - - 0.0000000000000000000000000000000000000000000000000000000000000009781 225.0
PJD3_k127_1947287_0 Beta-eliminating lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 522.0
PJD3_k127_1947287_1 UPF0365 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009629 416.0
PJD3_k127_1947287_10 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000002557 130.0
PJD3_k127_1947287_11 - - - - 0.0000000000008992 76.0
PJD3_k127_1947287_12 Iron permease FTR1 family K07243 - - 0.0000000005236 68.0
PJD3_k127_1947287_2 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 328.0
PJD3_k127_1947287_3 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000004472 199.0
PJD3_k127_1947287_4 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K01647,K22491 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000001094 203.0
PJD3_k127_1947287_5 long-chain fatty acid transporting porin activity K07267 - - 0.0000000000000000000000000000000000000000000000000001413 198.0
PJD3_k127_1947287_6 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.00000000000000000000000000000000000000000000000002501 185.0
PJD3_k127_1947287_7 Magnesium transporter MgtC K07507 - - 0.000000000000000000000000000000000000000000000002159 181.0
PJD3_k127_1947287_8 Tetratricopeptide repeat K08309 - - 0.0000000000000000000000000000000000000001475 173.0
PJD3_k127_1947287_9 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000006104 146.0
PJD3_k127_1964038_0 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 514.0
PJD3_k127_1964038_1 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.0000000000000000000000000000000000000000002577 165.0
PJD3_k127_1964038_2 Hydrolases of the alpha beta superfamily K06889 - - 0.000000000000000000000000000000002071 143.0
PJD3_k127_1964038_3 - - - - 0.0000000000000000001624 93.0
PJD3_k127_1964038_4 N-formylglutamate amidohydrolase - - - 0.0003415 46.0
PJD3_k127_1972009_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 1.134e-207 658.0
PJD3_k127_1972009_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.3.5.3 0.000000000000000000000000000000009115 130.0
PJD3_k127_1972009_2 Transcription factor zinc-finger K09981 - - 0.0000000000000001076 84.0
PJD3_k127_1982488_0 Selenocysteine-specific translation elongation factor K03833 - - 0.000000000000000000000000000000000000000000000000000000000000001956 224.0
PJD3_k127_1982488_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.00000000005195 67.0
PJD3_k127_199522_0 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000002479 258.0
PJD3_k127_1997535_0 Beta-galactosidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 332.0
PJD3_k127_2018962_0 ABC transporter transmembrane region K18890 - - 6.103e-196 632.0
PJD3_k127_2018962_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000008204 109.0
PJD3_k127_2018962_2 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.00000000000003662 82.0
PJD3_k127_2044826_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA NapA NarB subfamily K02567 - - 5.606e-281 891.0
PJD3_k127_2044826_1 Seven times multi-haem cytochrome CxxCH - - - 4.855e-207 657.0
PJD3_k127_2044826_11 ester cyclase - - - 0.000125 50.0
PJD3_k127_2044826_2 Cytochrome b(N-terminal)/b6/petB K00412,K02635,K02637,K03887,K03891,K15879 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0009512,GO:0009579,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032991,GO:0040007,GO:0044424,GO:0044425,GO:0044436,GO:0044459,GO:0044464,GO:0070069,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 292.0
PJD3_k127_2044826_3 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002728 264.0
PJD3_k127_2044826_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000001816 266.0
PJD3_k127_2044826_5 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004811 264.0
PJD3_k127_2044826_6 ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component - - - 0.000000000000000000000000000000000000000000000000001351 190.0
PJD3_k127_2044826_7 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000000000002619 149.0
PJD3_k127_2044826_9 PFAM Rieske 2Fe-2S domain K03886 - - 0.0000000000004626 77.0
PJD3_k127_2046164_0 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003472 278.0
PJD3_k127_2063508_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000001157 258.0
PJD3_k127_2063508_1 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.00000000000000000000000000000000000000000000000000006051 190.0
PJD3_k127_2073451_0 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 5.477e-228 728.0
PJD3_k127_2073451_1 tRNA synthetases class I (W and Y) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009057 391.0
PJD3_k127_2073451_2 HNH nucleases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003924 287.0
PJD3_k127_2073451_3 Amidohydrolase family K12960,K20810 - 3.5.4.28,3.5.4.31,3.5.4.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000008431 273.0
PJD3_k127_2073451_4 - - - - 0.0000000000005848 78.0
PJD3_k127_2073525_0 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 1.279e-207 659.0
PJD3_k127_2073525_1 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 380.0
PJD3_k127_2073525_2 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000505 279.0
PJD3_k127_2073525_3 phosphorelay signal transduction system K02483 - - 0.000000002076 58.0
PJD3_k127_209093_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000009543 93.0
PJD3_k127_2093065_0 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 425.0
PJD3_k127_2093065_1 symporter activity K03307 - - 0.00000000000000000000000000000000000000000000000000000003199 202.0
PJD3_k127_2095793_0 non-ribosomal peptide synthetase K16416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 301.0
PJD3_k127_2115379_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 287.0
PJD3_k127_2115379_1 D-aminopeptidase K16203 - - 0.000000000000000000000000000000000000000000000007812 175.0
PJD3_k127_2115379_2 Glucose sorbosone - - - 0.000000000000000000000000000000001283 138.0
PJD3_k127_2115745_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 451.0
PJD3_k127_2115745_1 Rdx family K07401 - - 0.00000001484 57.0
PJD3_k127_2123267_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007699 595.0
PJD3_k127_2123267_1 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007422 498.0
PJD3_k127_2123267_2 2-phosphosulpholactate phosphatase K05979 - 3.1.3.71 0.00000000000000000000000000000000000004365 152.0
PJD3_k127_2166679_0 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 547.0
PJD3_k127_2166679_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000465 139.0
PJD3_k127_2166679_2 Protein of unknown function (DUF2723) - - - 0.000000000000000000000008838 103.0
PJD3_k127_2171824_0 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 293.0
PJD3_k127_2171824_1 Part of the ABC transporter FtsEX involved in K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003263 285.0
PJD3_k127_2171824_2 ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001117 269.0
PJD3_k127_2177388_0 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 571.0
PJD3_k127_2177388_1 alpha/beta hydrolase fold - - - 0.000000001068 64.0
PJD3_k127_2179424_0 MgsA AAA+ ATPase C terminal K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 497.0
PJD3_k127_2179424_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 443.0
PJD3_k127_2179424_2 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 383.0
PJD3_k127_2179424_3 Bacterial sugar transferase - - - 0.0000000000000000000000000000000000000004159 165.0
PJD3_k127_2179424_4 Late embryogenesis abundant protein - - - 0.000000009858 63.0
PJD3_k127_2195621_0 Belongs to the enoyl-CoA hydratase isomerase family K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 2.116e-216 692.0
PJD3_k127_2195621_1 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 528.0
PJD3_k127_2195621_2 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 403.0
PJD3_k127_2195621_3 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000004309 154.0
PJD3_k127_2195621_4 Tellurite resistance protein TehB - - - 0.00000000000000000000001452 109.0
PJD3_k127_2195779_0 Atp-dependent helicase - - - 2.073e-292 923.0
PJD3_k127_2195779_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.219e-248 781.0
PJD3_k127_2195779_10 zinc D-Ala-D-Ala carboxypeptidase activity K08641 - 3.4.13.22 0.0000000000000000000000000000000000000000000000000000000000000000002358 237.0
PJD3_k127_2195779_11 impB/mucB/samB family K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000495 203.0
PJD3_k127_2195779_12 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter - - - 0.0000000000000000000000000000000000000404 147.0
PJD3_k127_2195779_13 Transcription elongation factor, N-terminal K03624 - - 0.0000000000000000000000000000000000006732 144.0
PJD3_k127_2195779_14 Thioesterase superfamily K07107 - - 0.0000000000000000000005244 106.0
PJD3_k127_2195779_15 Dodecin K09165 - - 0.000000000000000000001676 97.0
PJD3_k127_2195779_16 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.00000000001584 69.0
PJD3_k127_2195779_17 Bacterial regulatory proteins, tetR family - - - 0.00000006841 62.0
PJD3_k127_2195779_18 PAS modulated sigma54 specific transcriptional regulator, Fis family - - - 0.000005505 56.0
PJD3_k127_2195779_19 - - - - 0.0001151 52.0
PJD3_k127_2195779_2 DNA-directed DNA polymerase K02337,K14162 - 2.7.7.7 3.249e-241 780.0
PJD3_k127_2195779_20 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0004795 46.0
PJD3_k127_2195779_3 LytB protein K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 473.0
PJD3_k127_2195779_4 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007676 314.0
PJD3_k127_2195779_5 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003554 290.0
PJD3_k127_2195779_6 glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000001352 267.0
PJD3_k127_2195779_7 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000001668 278.0
PJD3_k127_2195779_8 Cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000003193 241.0
PJD3_k127_2195779_9 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000359 248.0
PJD3_k127_2220359_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 4.536e-211 673.0
PJD3_k127_2220359_1 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 344.0
PJD3_k127_2220359_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00005869 48.0
PJD3_k127_2230306_0 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000002534 179.0
PJD3_k127_2236142_0 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002635 254.0
PJD3_k127_2236142_1 Belongs to the UPF0219 family K01641 - 2.3.3.10 0.00000000000000000000000001875 119.0
PJD3_k127_2257276_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008085 262.0
PJD3_k127_2257276_1 EXOIII K02342 - 2.7.7.7 0.00000000000000000000000000004248 119.0
PJD3_k127_2258210_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 3.154e-207 662.0
PJD3_k127_2258210_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 604.0
PJD3_k127_2258210_2 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000001081 248.0
PJD3_k127_2258210_3 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000001559 251.0
PJD3_k127_2258210_4 PFAM Bacterial regulatory proteins, tetR family K09017,K22295 - - 0.00000000000000000000000000000000000000001736 162.0
PJD3_k127_2264653_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 596.0
PJD3_k127_2264653_1 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K01501 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007706 342.0
PJD3_k127_2264653_2 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000003919 228.0
PJD3_k127_2264653_3 PFAM beta-lactamase domain protein K13075 - 3.1.1.81 0.0000000000000000002788 90.0
PJD3_k127_2279254_0 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000003636 201.0
PJD3_k127_2282058_0 pfam abc-3 K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 327.0
PJD3_k127_2282058_1 ABC transporter K09817 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006313 287.0
PJD3_k127_2282058_2 Helix-hairpin-helix domain K04477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002939 277.0
PJD3_k127_2282058_3 PFAM periplasmic solute binding protein K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004629 279.0
PJD3_k127_2282058_4 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000002427 220.0
PJD3_k127_2282058_5 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000000000000000000001979 114.0
PJD3_k127_228996_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006334 452.0
PJD3_k127_2303882_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 520.0
PJD3_k127_2303882_1 Cupin 2, conserved barrel domain protein - - - 0.00000000004435 72.0
PJD3_k127_2304780_0 Putative carbohydrate binding domain K12373 - 3.2.1.52 5.251e-215 689.0
PJD3_k127_2304780_1 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 326.0
PJD3_k127_2304780_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000005047 224.0
PJD3_k127_2309353_0 Glycosyl hydrolases family 43 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 329.0
PJD3_k127_2320605_0 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000001977 151.0
PJD3_k127_2320605_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000189 98.0
PJD3_k127_2320605_2 Belongs to the TrpC family K01609 - 4.1.1.48 0.000000000000007913 76.0
PJD3_k127_2325679_0 Nucleoside recognition K06373 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 399.0
PJD3_k127_2325679_1 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008323 282.0
PJD3_k127_2325679_2 Nucleoside recognition K06374 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003216 264.0
PJD3_k127_2325679_3 Zinc carboxypeptidase - - - 0.0000000000005771 73.0
PJD3_k127_2352421_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000001194 98.0
PJD3_k127_2417779_0 COG3119 Arylsulfatase A and related enzymes K01130 - 3.1.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 295.0
PJD3_k127_2417779_1 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000001193 180.0
PJD3_k127_2433121_0 Glycosyl transferase 4-like K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 437.0
PJD3_k127_2433121_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000001295 224.0
PJD3_k127_2433121_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000002661 213.0
PJD3_k127_2433121_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000001463 188.0
PJD3_k127_2433121_4 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.000000000000000000000000000003461 134.0
PJD3_k127_2440919_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 335.0
PJD3_k127_2440919_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000003892 202.0
PJD3_k127_2440919_2 methyltransferase activity - - - 0.0000000000000000000000000000001009 130.0
PJD3_k127_2440919_3 pathogenesis - - - 0.0000000000002053 79.0
PJD3_k127_244959_0 Family of unknown function (DUF1028) - - - 0.0000000000000000000000000000002217 127.0
PJD3_k127_244959_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00001035 58.0
PJD3_k127_2455253_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 428.0
PJD3_k127_248136_0 FAD-linked oxidoreductase K00103 - 1.1.3.8 0.0000000000000000000000005196 121.0
PJD3_k127_248136_1 Cell wall-active antibiotics response 4TMS YvqF - - - 0.00000000006251 72.0
PJD3_k127_2482182_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 586.0
PJD3_k127_2482182_1 ATPase with chaperone activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 422.0
PJD3_k127_2482182_10 type II secretion system protein K12510 - - 0.0000000000000004062 80.0
PJD3_k127_2482182_11 Polymer-forming cytoskeletal - - - 0.0000000000007093 79.0
PJD3_k127_2482182_12 - - - - 0.0000000779 62.0
PJD3_k127_2482182_2 ABC transporter K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 413.0
PJD3_k127_2482182_3 Cellulose biosynthesis protein BcsQ K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 338.0
PJD3_k127_2482182_4 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 300.0
PJD3_k127_2482182_5 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003578 266.0
PJD3_k127_2482182_6 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002241 249.0
PJD3_k127_2482182_7 Type II secretion system (T2SS), protein F - - - 0.000000000000000000000000000000000000000000000000000000000001653 223.0
PJD3_k127_2482182_8 PFAM peptidase - - - 0.000000000000000000000076 108.0
PJD3_k127_2482182_9 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000003117 107.0
PJD3_k127_2489530_0 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003594 433.0
PJD3_k127_2489530_1 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000002643 267.0
PJD3_k127_2489530_2 protein kinase activity - - - 0.0000000000000000000000000000000000000000003724 160.0
PJD3_k127_2489530_3 - - - - 0.00000000000000002282 95.0
PJD3_k127_2489530_4 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.00055 46.0
PJD3_k127_2491761_0 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000014 141.0
PJD3_k127_2491761_1 Aminotransferase K00824 - 2.6.1.21 0.0000000002899 61.0
PJD3_k127_2495161_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000843 434.0
PJD3_k127_2495161_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000003443 230.0
PJD3_k127_2495161_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000005175 69.0
PJD3_k127_2495161_3 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00006608 51.0
PJD3_k127_2495161_4 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.0004734 47.0
PJD3_k127_2496082_0 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000001118 112.0
PJD3_k127_250404_0 PFAM Conserved region in glutamate synthase - - - 1.433e-249 779.0
PJD3_k127_250404_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000008609 220.0
PJD3_k127_250404_2 Acid phosphatase - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000001122 126.0
PJD3_k127_250404_3 ApaG domain K06195 - - 0.0000000000001393 75.0
PJD3_k127_2506839_0 nuclear chromosome segregation - - - 1.811e-202 674.0
PJD3_k127_2506839_1 Aerotolerance regulator N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007195 332.0
PJD3_k127_2506839_2 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0008562 43.0
PJD3_k127_2511909_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000002753 252.0
PJD3_k127_2511909_1 Putative regulatory protein - - - 0.0000000001217 63.0
PJD3_k127_2535964_0 Methylmalonyl-CoA mutase K01848,K11942 - 5.4.99.13,5.4.99.2 2.55e-256 805.0
PJD3_k127_2535964_1 ArgK protein K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 379.0
PJD3_k127_2535964_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 373.0
PJD3_k127_2535964_3 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006387 354.0
PJD3_k127_2535964_4 translation release factor activity K03265 GO:0001666,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0008150,GO:0009628,GO:0016020,GO:0030312,GO:0036293,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070482,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000007845 240.0
PJD3_k127_2535964_5 CBS domain containing protein K06189 - - 0.000000009502 60.0
PJD3_k127_2540779_0 SelR domain K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000001179 242.0
PJD3_k127_2540779_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000005695 70.0
PJD3_k127_2544189_0 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004979 486.0
PJD3_k127_2544189_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 437.0
PJD3_k127_2544189_2 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000004646 134.0
PJD3_k127_2544189_3 Tetratricopeptide repeat - - - 0.0002896 45.0
PJD3_k127_2555902_0 Thiolase, C-terminal domain K00626,K07508 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 469.0
PJD3_k127_2555902_1 Dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008215 353.0
PJD3_k127_2555902_2 PFAM Band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002223 291.0
PJD3_k127_2555902_3 - - - - 0.0000000000000000000000000000000002295 143.0
PJD3_k127_2555902_4 3-hydroxyacyl-CoA dehydrogenase - - - 0.0000000000000000000000001263 108.0
PJD3_k127_2555902_5 - - - - 0.000000000000002489 79.0
PJD3_k127_2570902_0 Molybdopterin oxidoreductase Fe4S4 domain K08357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 345.0
PJD3_k127_2570902_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000007996 270.0
PJD3_k127_2570902_2 SpoU rRNA Methylase family K02533,K15396 - 2.1.1.200 0.000000000000000000000000000000000000000000003985 174.0
PJD3_k127_2570902_3 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000007401 133.0
PJD3_k127_2570902_4 Rubrerythrin - - - 0.000000009729 57.0
PJD3_k127_259544_0 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009871 319.0
PJD3_k127_259544_1 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000003182 265.0
PJD3_k127_259544_2 SIS domain K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000004029 171.0
PJD3_k127_2606102_0 NifU-like N terminal domain K04488 - - 0.0000000000000000004866 91.0
PJD3_k127_2613260_0 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 586.0
PJD3_k127_2613260_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104 436.0
PJD3_k127_2613260_2 component I K01665 - 2.6.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 392.0
PJD3_k127_2613260_3 Peptidase C26 K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000001126 255.0
PJD3_k127_2613260_4 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000005386 146.0
PJD3_k127_2613260_5 Putative glycosyl hydrolase domain - - - 0.0000000000002632 78.0
PJD3_k127_2613260_6 Rdx family K07401 - - 0.000000008634 58.0
PJD3_k127_2622680_0 Beta-eliminating lyase K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000001101 221.0
PJD3_k127_2622680_1 - - - - 0.0000000000000000000007841 101.0
PJD3_k127_2632049_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0001130,GO:0001131,GO:0001141,GO:0001217,GO:0002161,GO:0002196,GO:0003674,GO:0003700,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006355,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009451,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:0140110,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.1.1.7 1.927e-227 730.0
PJD3_k127_2632049_1 regulatory protein RecX K03565 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000003423 91.0
PJD3_k127_2637456_0 Putative cyclase K07130 GO:0003674,GO:0003824,GO:0004061,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 350.0
PJD3_k127_2637456_1 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000007312 192.0
PJD3_k127_2637456_2 - - - - 0.000000000000000000000000000000000000000000000002074 178.0
PJD3_k127_2637456_3 Oxidoreductase activity. It is involved in the biological process described with metabolic process - - - 0.00000000000000000000000000000000003169 136.0
PJD3_k127_2637456_4 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000005435 134.0
PJD3_k127_2650774_0 - - - - 0.000000000000000000002036 100.0
PJD3_k127_2650774_1 Bacteriophage related domain of unknown function - - - 0.00004768 52.0
PJD3_k127_2655941_0 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000006099 142.0
PJD3_k127_2655941_1 - - - - 0.0000000000001415 83.0
PJD3_k127_266054_0 Formiminotransferase-cyclodeaminase K00603,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 524.0
PJD3_k127_2671830_0 NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000724 157.0
PJD3_k127_2671830_1 PFAM Methyltransferase type 11 K00598 - 2.1.1.144 0.00000000000000000000000000000000000000878 148.0
PJD3_k127_2693681_0 B3/4 domain K01890 - 6.1.1.20 3.934e-194 631.0
PJD3_k127_2693681_1 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 607.0
PJD3_k127_2693681_10 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000002064 83.0
PJD3_k127_2693681_11 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000002187 81.0
PJD3_k127_2693681_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 362.0
PJD3_k127_2693681_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006642 355.0
PJD3_k127_2693681_4 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 348.0
PJD3_k127_2693681_5 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000001679 239.0
PJD3_k127_2693681_6 EXOIII K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000002486 204.0
PJD3_k127_2693681_7 Amidinotransferase K01478 - 3.5.3.6 0.0000000000000000000000000000000000000000000000000000005985 203.0
PJD3_k127_2693681_8 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000001805 144.0
PJD3_k127_2693681_9 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000003893 111.0
PJD3_k127_2714177_0 chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 333.0
PJD3_k127_2714177_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 298.0
PJD3_k127_2721939_0 tRNA wobble adenosine to inosine editing - - - 0.0000000000000000000000000000000000000000000000000000000000000000002978 233.0
PJD3_k127_2721939_1 - - - - 0.000000000000000000000000000000009732 138.0
PJD3_k127_2721939_2 - - - - 0.0000000000000000005084 91.0
PJD3_k127_2734122_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000007853 184.0
PJD3_k127_2734122_1 Glycosyl transferase family group 2 K19003 - 2.4.1.336 0.000455 49.0
PJD3_k127_2735588_0 Ricin-type beta-trefoil - - - 0.000000000000000000000000000000001324 134.0
PJD3_k127_2735588_1 - - - - 0.000000000000000000000000004467 113.0
PJD3_k127_2737876_0 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddB nuclease domain is not required for chi fragment generation K16899 - 3.6.4.12 0.00000000000000000000000000000000000000009154 165.0
PJD3_k127_27419_0 PFAM Thiolase K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004838 428.0
PJD3_k127_27419_1 Belongs to the UPF0219 family K01641 - 2.3.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 348.0
PJD3_k127_27419_2 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001923 287.0
PJD3_k127_27419_3 - - - - 0.000000000000000000000000000000000000000000000000000000000001789 221.0
PJD3_k127_27419_4 MobA-like NTP transferase domain - - - 0.00000000000000000000000000000000000000000000000000000002098 208.0
PJD3_k127_27419_5 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000000000000000000000003657 128.0
PJD3_k127_2746914_0 regulation of translation K03530,K05788 - - 0.0000000000000000001967 92.0
PJD3_k127_2746914_1 Alpha-L-rhamnosidase N-terminal domain K05989 - 3.2.1.40 0.0000000001016 70.0
PJD3_k127_2746914_2 pilus assembly protein PilW - - - 0.00006303 55.0
PJD3_k127_2746914_4 COG4967 Tfp pilus assembly protein PilV K02671 - - 0.0005955 49.0
PJD3_k127_2774282_0 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 389.0
PJD3_k127_2774282_1 PFAM glycosyl transferase family 9 - - - 0.00000000000000000000000000000000000009448 146.0
PJD3_k127_2774282_2 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway - - - 0.00000000000000000007797 92.0
PJD3_k127_2774282_3 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000003107 74.0
PJD3_k127_2777753_0 Acyl-CoA dehydrogenase, C-terminal domain K18244 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 432.0
PJD3_k127_2777753_1 Peptidase family S58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 326.0
PJD3_k127_2777753_2 Lysin motif - - - 0.000000000000000000000000000000000000000000000002629 177.0
PJD3_k127_2777753_3 PFAM Bacterial protein of - - - 0.0000000000000000000000000001075 123.0
PJD3_k127_2793823_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000425 412.0
PJD3_k127_2812841_0 PFAM Type II secretion system protein E K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003799 450.0
PJD3_k127_2812841_1 Type II secretion system (T2SS), protein G K02456 - - 0.00000000000000000000000000000000000000000003951 166.0
PJD3_k127_2812841_2 Type II secretion system (T2SS), protein F K02455,K02653 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0032940,GO:0033036,GO:0042886,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098776 - 0.00000000000009804 78.0
PJD3_k127_2817085_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K07303 - 1.3.99.16 0.0 1028.0
PJD3_k127_2817085_1 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 435.0
PJD3_k127_2817085_2 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.00000000000000000000001595 100.0
PJD3_k127_2834093_0 carbohydrate binding - - - 2.051e-234 733.0
PJD3_k127_28492_0 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 313.0
PJD3_k127_28492_1 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000002706 205.0
PJD3_k127_28492_2 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0001961 51.0
PJD3_k127_2855180_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1144.0
PJD3_k127_2855180_1 AcrB/AcrD/AcrF family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 617.0
PJD3_k127_2855180_2 diguanylate cyclase K02488 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 426.0
PJD3_k127_2855180_3 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000002675 255.0
PJD3_k127_2855180_4 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000001334 219.0
PJD3_k127_2855180_5 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.0000000000000000000000000000000000000000000005362 181.0
PJD3_k127_2873037_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000001123 258.0
PJD3_k127_2873037_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000003561 214.0
PJD3_k127_289605_0 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 403.0
PJD3_k127_2901923_1 Protein of unknown function (DUF1573) - - - 0.00002367 46.0
PJD3_k127_2906596_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0 1516.0
PJD3_k127_2906596_1 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 2.605e-195 623.0
PJD3_k127_2906596_2 Sulfate permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 398.0
PJD3_k127_2911734_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000002599 208.0
PJD3_k127_2911734_1 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000001323 200.0
PJD3_k127_2911734_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000002861 63.0
PJD3_k127_2911734_3 Flavin containing amine oxidoreductase - - - 0.00000372 50.0
PJD3_k127_2923762_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003077 289.0
PJD3_k127_2945086_0 Glycosyltransferase Family 4 K14335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 408.0
PJD3_k127_2945086_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 316.0
PJD3_k127_2945086_2 COGs COG0491 Zn-dependent hydrolase including glyoxylase - - - 0.0000000000000000000000000000000000000000000000000000000003084 212.0
PJD3_k127_2945086_3 - - - - 0.000000000000000000000000000000000000000000000000000000002044 211.0
PJD3_k127_2945086_4 cAMP biosynthetic process K01768 - 4.6.1.1 0.00000000000000000000818 94.0
PJD3_k127_2947233_0 protein secretion K09800 - - 0.00000000003856 75.0
PJD3_k127_2951014_0 MotA/TolQ/ExbB proton channel family K03562 - - 0.00000000000000000000000000000000000000000000000000000009852 204.0
PJD3_k127_2951014_1 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.000000000000000000000000000000000000001944 151.0
PJD3_k127_2951014_2 TonB C terminal K03832 - - 0.00000000000000000000005449 108.0
PJD3_k127_2972537_0 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001357 270.0
PJD3_k127_2972537_1 cytochrome p450 - - - 0.0000000000003476 71.0
PJD3_k127_2983244_0 3-beta hydroxysteroid dehydrogenase/isomerase family K01710,K08678 - 4.1.1.35,4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 460.0
PJD3_k127_2983244_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 326.0
PJD3_k127_2983244_2 RmlD substrate binding domain K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 304.0
PJD3_k127_2983244_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.00000000000000000000000000000000000000000122 164.0
PJD3_k127_2983244_4 Outer membrane lipoprotein K05807 - - 0.0000000000000000000000000000000000000171 155.0
PJD3_k127_2983244_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000005079 129.0
PJD3_k127_2984464_0 oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor K00311 GO:0003674,GO:0003824,GO:0004174,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016645,GO:0016649,GO:0016722,GO:0017133,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032592,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043783,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045251,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070013,GO:0098573,GO:0098798,GO:1902494,GO:1990204 1.5.5.1 2.18e-209 668.0
PJD3_k127_2984464_1 diguanylate cyclase - - - 0.00000000000000000000000001374 121.0
PJD3_k127_2984464_2 nucleic-acid-binding protein containing a Zn-ribbon K07068 - - 0.0000001379 58.0
PJD3_k127_2986414_0 oxidoreductase activity K07114 - - 0.000000000000003387 86.0
PJD3_k127_2986414_1 WD-40 repeat - - - 0.0000009021 60.0
PJD3_k127_298671_0 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 334.0
PJD3_k127_298671_1 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.000000000000000000000000000000000000000000003706 166.0
PJD3_k127_2988760_0 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000002078 65.0
PJD3_k127_2988760_1 Biotin protein ligase C terminal domain K03524 - 6.3.4.15 0.0008282 42.0
PJD3_k127_300323_0 Phenazine biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000607 358.0
PJD3_k127_300323_1 response regulator K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081 342.0
PJD3_k127_300323_2 Histidine kinase K13598 - 2.7.13.3 0.00000000000000000000000000000000000000001811 174.0
PJD3_k127_300323_3 Anaphase-promoting complex, cyclosome, subunit 3 - - - 0.00000000000000000000000001538 121.0
PJD3_k127_300323_4 Belongs to the ABC transporter superfamily K02032 - - 0.0000000007188 60.0
PJD3_k127_3007582_0 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 434.0
PJD3_k127_3007582_1 TIGRFAM phosphate ABC transporter, phosphate-binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008022 363.0
PJD3_k127_3007582_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 333.0
PJD3_k127_3007582_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 327.0
PJD3_k127_3007582_4 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 316.0
PJD3_k127_3007582_5 Phosphate transport system permease protein PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 301.0
PJD3_k127_3007582_6 negative regulation of phosphate transmembrane transport K02039 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000000000000000000000000000001934 235.0
PJD3_k127_3007582_7 Involved in the tonB-independent uptake of proteins K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000007736 239.0
PJD3_k127_3007582_8 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000001102 218.0
PJD3_k127_3016181_0 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 561.0
PJD3_k127_3016181_1 Amidohydrolase family K01464 - 3.5.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 543.0
PJD3_k127_3016181_10 Psort location Cytoplasmic, score 7.50 K01239 - 3.2.2.1 0.0004585 44.0
PJD3_k127_3016181_2 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 355.0
PJD3_k127_3016181_3 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 349.0
PJD3_k127_3016181_4 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 358.0
PJD3_k127_3016181_5 Protein of unknown function DUF99 K09120 - - 0.00000000000000000000000000000000000000000000000000000000002956 212.0
PJD3_k127_3016181_7 - - - - 0.00000000000000000000000000003695 119.0
PJD3_k127_3016181_8 Protein of unknown function (DUF3568) - - - 0.00000000000001717 81.0
PJD3_k127_3016181_9 - - - - 0.0002194 53.0
PJD3_k127_3023133_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 351.0
PJD3_k127_3023133_2 DNA-templated transcription, initiation K03088 - - 0.00000000125 60.0
PJD3_k127_3023133_3 - - - - 0.00000001343 60.0
PJD3_k127_3023133_4 PFAM blue (type 1) copper domain protein - - - 0.000001543 59.0
PJD3_k127_3023133_5 Protein tyrosine kinase - - - 0.00002234 54.0
PJD3_k127_303890_0 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009122 474.0
PJD3_k127_303890_1 tRNA processing K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002136 265.0
PJD3_k127_303890_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000001602 118.0
PJD3_k127_303890_3 RF-1 domain K15034 - - 0.000000000000000000000001074 113.0
PJD3_k127_3041899_0 Beta-L-arabinofuranosidase, GH127 K09955 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006515 361.0
PJD3_k127_3041899_1 COG3119 Arylsulfatase A K01133 - 3.1.6.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002493 281.0
PJD3_k127_3052571_0 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000003629 212.0
PJD3_k127_3054031_0 Domain of unknown function (DUF4215) - - - 0.0000000000000000000001266 107.0
PJD3_k127_3064006_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 310.0
PJD3_k127_3064006_1 Cys/Met metabolism PLP-dependent enzyme K01758 - 4.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002845 278.0
PJD3_k127_3083576_0 TonB-dependent receptor - - - 3.093e-222 715.0
PJD3_k127_3083576_1 amino acid K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 499.0
PJD3_k127_3083576_2 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001752 293.0
PJD3_k127_3083576_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000005167 214.0
PJD3_k127_3083576_4 Domain of unknown function (DUF4340) - - - 0.00002887 56.0
PJD3_k127_3084034_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004676 499.0
PJD3_k127_3084034_1 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 365.0
PJD3_k127_3084034_2 FES K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003092 263.0
PJD3_k127_3084034_3 Predicted membrane protein (DUF2238) K08984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004596 261.0
PJD3_k127_3084034_4 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001355 256.0
PJD3_k127_3084034_5 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000006609 207.0
PJD3_k127_3084034_6 Putative lumazine-binding - - - 0.00000000000000000000000000000002538 132.0
PJD3_k127_3084034_7 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000000000003728 104.0
PJD3_k127_3084034_8 MlaD protein K02067 - - 0.00000000000000000006445 100.0
PJD3_k127_3084034_9 Patatin-like phospholipase K07001 GO:0003674,GO:0003824,GO:0016787 - 0.0000000000000000007233 96.0
PJD3_k127_3099152_0 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000003631 194.0
PJD3_k127_3099152_1 Protein-S-isoprenylcysteine methyltransferase - - - 0.000000000000000000002502 98.0
PJD3_k127_310336_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 5.868e-235 766.0
PJD3_k127_310336_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 390.0
PJD3_k127_310336_2 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000835 309.0
PJD3_k127_310336_3 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002442 254.0
PJD3_k127_310336_4 PPIC-type PPIASE domain K03770 - 5.2.1.8 0.0000000000000000000000000000000000000005288 164.0
PJD3_k127_310336_5 Periplasmic Protein - - - 0.0000008531 61.0
PJD3_k127_310336_6 oxidoreductase activity K21000 - - 0.0001016 55.0
PJD3_k127_3108026_0 Serine Threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 384.0
PJD3_k127_3108026_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000009228 80.0
PJD3_k127_3109461_0 PFAM Glycosyl transferase family 2 K09931 - - 0.000000000000000000000000000000000000000000000000004169 188.0
PJD3_k127_3109461_1 efflux transmembrane transporter activity - - - 0.000000007796 57.0
PJD3_k127_3111394_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 601.0
PJD3_k127_3111394_1 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 352.0
PJD3_k127_3111394_2 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 291.0
PJD3_k127_3111394_3 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104,K03325,K03741,K03892,K18701 - 1.20.4.1,2.8.4.2,3.1.3.48 0.00000000000000000000000000000000000000000000006199 173.0
PJD3_k127_3111394_4 Protein of unknown function (DUF1572) - - - 0.0000000000000000000000000000000000000004832 153.0
PJD3_k127_3111394_5 Thioredoxin-like - - - 0.000000000000000000000000000000000005769 146.0
PJD3_k127_3111394_6 Domain of unknown function (DUF4177) - - - 0.00004554 52.0
PJD3_k127_311302_0 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003521 250.0
PJD3_k127_311302_1 Domain of unknown function (DUF1820) - - - 0.000000000000000000000000000000000000000001388 159.0
PJD3_k127_311302_2 conserved protein, contains FHA domain K11894 - - 0.00000000000000000000002324 104.0
PJD3_k127_3116285_0 Outer membrane efflux protein K12340 - - 0.0000001831 55.0
PJD3_k127_3126717_0 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000005574 193.0
PJD3_k127_3126717_1 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000168 47.0
PJD3_k127_3134280_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 426.0
PJD3_k127_3134280_1 AIR carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000002874 240.0
PJD3_k127_3134280_2 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000000000000000000000000000000006864 151.0
PJD3_k127_3134280_3 - - - - 0.000000000000000000000005609 112.0
PJD3_k127_3134280_4 PFAM GGDEF domain containing protein K02488 - 2.7.7.65 0.00000000000000000002603 105.0
PJD3_k127_3134280_5 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000002467 70.0
PJD3_k127_3138181_0 PFAM aminotransferase, class I K00812,K10907 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003617 292.0
PJD3_k127_3138181_1 COGs COG2380 conserved - - - 0.0000000000000000000000000000000001212 145.0
PJD3_k127_3138181_2 COG0433 Predicted ATPase K06915 - - 0.00001098 48.0
PJD3_k127_313904_0 Aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 1.033e-219 694.0
PJD3_k127_313904_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008555 409.0
PJD3_k127_313904_2 Fatty acid desaturase K03921 - 1.14.19.11,1.14.19.2,1.14.19.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 395.0
PJD3_k127_313904_3 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 359.0
PJD3_k127_313904_4 tungstate binding K15495 - - 0.000000000000000000000000000000000000000000000000000000000000000000008484 247.0
PJD3_k127_313904_5 Thioredoxin-like domain K03672 - 1.8.1.8 0.0000000000000000000000000000000000000006072 154.0
PJD3_k127_313904_6 protein involved in tolerance to divalent cations K03926 - - 0.000000000000000000000000002727 116.0
PJD3_k127_313904_7 Acid phosphatase homologues - - - 0.00000000000000000000002538 110.0
PJD3_k127_313904_8 Yip1 domain - - - 0.0000000000000000001517 98.0
PJD3_k127_3145489_0 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000001166 269.0
PJD3_k127_3145489_1 Peptidase, M28 - - - 0.00000000000000000000000000000000000000000000003343 183.0
PJD3_k127_3145489_2 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000001622 164.0
PJD3_k127_3145489_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000783 93.0
PJD3_k127_3163515_0 L-asparaginase II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 359.0
PJD3_k127_3163515_1 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 349.0
PJD3_k127_3163515_2 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000009623 99.0
PJD3_k127_3163515_3 Gliding motility protein RemB - - - 0.000000146 64.0
PJD3_k127_3173862_0 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006993 284.0
PJD3_k127_3173862_1 Peptidase family M48 K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000003231 237.0
PJD3_k127_3182882_0 domain protein K20276 - - 0.00000000000000000000000000000000008903 147.0
PJD3_k127_3183807_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954 514.0
PJD3_k127_3183807_1 Bacillithiol biosynthesis BshC K22136 - - 0.00000000000000000000006984 106.0
PJD3_k127_3196296_0 radical SAM domain protein - - - 1.972e-217 685.0
PJD3_k127_3196296_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 496.0
PJD3_k127_3196296_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000013 289.0
PJD3_k127_3196296_3 Predicted membrane protein (DUF2177) - - - 0.00000000000000000000000000000000000000001365 157.0
PJD3_k127_3196296_4 Protein of unknown function (DUF664) - - - 0.000000000000000008542 92.0
PJD3_k127_3219848_0 CotH kinase protein - - - 0.000000000000000000000000000000000000000000000000000000000000000004475 244.0
PJD3_k127_3239028_0 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 422.0
PJD3_k127_3239028_1 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 335.0
PJD3_k127_3239028_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 306.0
PJD3_k127_3239028_3 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 - - 0.0000000000000000000000000000001091 127.0
PJD3_k127_3239028_4 - - - - 0.0009181 45.0
PJD3_k127_3242712_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 394.0
PJD3_k127_3242712_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005759 295.0
PJD3_k127_324754_0 transmembrane transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005259 484.0
PJD3_k127_324754_1 ribosylpyrimidine nucleosidase activity K01239 - 3.2.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007741 378.0
PJD3_k127_324754_10 Protein kinase domain K12132 - 2.7.11.1 0.000703 42.0
PJD3_k127_324754_2 COG0668 Small-conductance mechanosensitive channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 351.0
PJD3_k127_324754_3 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000001353 274.0
PJD3_k127_324754_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003763 259.0
PJD3_k127_324754_5 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000744 232.0
PJD3_k127_324754_6 Domain in cystathionine beta-synthase and other proteins. K07182 - - 0.0000000000000000001949 93.0
PJD3_k127_324754_7 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006323,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010556,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051276,GO:0060255,GO:0065007,GO:0071103,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2001141 - 0.00000000000000009368 86.0
PJD3_k127_324754_8 peptidase U32 - - - 0.000000000003081 69.0
PJD3_k127_324754_9 - - - - 0.0002641 49.0
PJD3_k127_3248936_0 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000004186 254.0
PJD3_k127_3248936_1 cellular response to heat K09807 - - 0.0000000000001043 74.0
PJD3_k127_324911_0 helix_turn _helix lactose operon repressor K02529 - - 0.000000000000000000000000000000000000000000000000000000000004299 214.0
PJD3_k127_324911_1 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000858 54.0
PJD3_k127_3276413_0 PQQ-like domain - - - 0.00000000000000000004457 101.0
PJD3_k127_3285716_0 Transketolase, pyrimidine binding domain K00167,K11381,K21417 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 508.0
PJD3_k127_3285716_1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 413.0
PJD3_k127_3285716_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003052 276.0
PJD3_k127_3293686_0 Nucleotidyl transferase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006886 326.0
PJD3_k127_3293686_1 - - - - 0.0000000000000000004769 94.0
PJD3_k127_3293686_2 Roadblock/LC7 domain K07131 - - 0.0000000000007244 73.0
PJD3_k127_3293686_3 Sugar nucleotidyl transferase - - - 0.000006076 56.0
PJD3_k127_3295092_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 7.282e-206 663.0
PJD3_k127_3295092_1 Peptidase U62 modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 507.0
PJD3_k127_3295092_2 Outer membrane protein beta-barrel domain - - - 0.0001724 51.0
PJD3_k127_3308765_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 327.0
PJD3_k127_332208_0 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000005184 267.0
PJD3_k127_332208_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000008924 258.0
PJD3_k127_332208_2 HEAT repeats - - - 0.0002447 49.0
PJD3_k127_3326584_0 iron ion homeostasis K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009774 313.0
PJD3_k127_3326584_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0016020,GO:0016021,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000116 286.0
PJD3_k127_3328990_0 COG1055 Na H antiporter NhaD and related arsenite - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003212 261.0
PJD3_k127_3328990_1 Uncharacterised protein family (UPF0014) K02069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007615 262.0
PJD3_k127_3328990_2 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002854 258.0
PJD3_k127_3328990_3 Leishmanolysin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000108 262.0
PJD3_k127_3328990_4 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000004951 166.0
PJD3_k127_3328990_5 protein kinase activity - - - 0.000000000000000000002459 102.0
PJD3_k127_3329490_0 Cellulose-binding family ii K01209 - 3.2.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 496.0
PJD3_k127_3332944_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006 - 2.7.9.1 0.0 1030.0
PJD3_k127_3332944_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 527.0
PJD3_k127_3332944_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000001732 241.0
PJD3_k127_3332944_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000002367 169.0
PJD3_k127_3344174_0 - - - - 0.0 1082.0
PJD3_k127_3344174_1 Amino acid permease K03294 - - 0.000000000000000000000000002701 113.0
PJD3_k127_3352871_0 Protein kinase domain K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 557.0
PJD3_k127_3355386_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005715 438.0
PJD3_k127_3355386_1 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 351.0
PJD3_k127_3355386_2 MatE K03327 - - 0.0000000000000000000000000000000000000000007455 162.0
PJD3_k127_3355386_3 haloacid dehalogenase-like hydrolase K01079 - 3.1.3.3 0.000000000000000000000000000000000000000001798 164.0
PJD3_k127_3355386_4 NhaP-type Na H and K H - - - 0.000000000000000006309 88.0
PJD3_k127_3360217_0 BMC K04025 - - 0.0000000000000000000000000000000000001003 148.0
PJD3_k127_3360217_1 cellular response to heat K09807 - - 0.0000000000000000000000000000285 122.0
PJD3_k127_3360217_2 Ethanolamine utilisation protein EutN/carboxysome - - - 0.0000000000000000003114 98.0
PJD3_k127_3360217_3 Carbon dioxide concentrating mechanism carboxysome shell protein K08697 - - 0.000000001039 66.0
PJD3_k127_3366661_0 Involved in the tonB-independent uptake of proteins - - - 4.536e-273 876.0
PJD3_k127_3366661_1 Sporulation related domain - - - 0.00000000000000000000000000000008653 141.0
PJD3_k127_3366661_2 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000002806 121.0
PJD3_k127_3366661_3 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000001348 89.0
PJD3_k127_3373207_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006608 430.0
PJD3_k127_3373207_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 386.0
PJD3_k127_3392924_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 454.0
PJD3_k127_3392924_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 410.0
PJD3_k127_3392924_2 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 388.0
PJD3_k127_3392924_3 PTS system sorbose subfamily IIB component K19507 - - 0.00000000000000000000000000000000000000000005538 170.0
PJD3_k127_3392924_4 6,7-dimethyl-8-ribityllumazine synthase K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000001319 143.0
PJD3_k127_3392924_5 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000004452 96.0
PJD3_k127_3392924_6 PTS system fructose IIA component K02744 - - 0.0000000000000006551 82.0
PJD3_k127_3392924_7 PTS system sorbose-specific iic component K02795 - - 0.000000000317 64.0
PJD3_k127_3392924_8 COG1544 Ribosome-associated protein Y (PSrp-1) K05808 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.000001676 54.0
PJD3_k127_3397010_0 - - - - 0.0000000000000000000000001848 119.0
PJD3_k127_3409761_0 3-isopropylmalate dehydratase activity K01703,K01704,K01705 - 4.2.1.33,4.2.1.35,4.2.1.36 8.719e-284 884.0
PJD3_k127_3409761_1 MmgE/PrpD family K01720 - 4.2.1.79 3.099e-211 664.0
PJD3_k127_3409761_2 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 610.0
PJD3_k127_3409761_3 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004315 445.0
PJD3_k127_3409761_4 mRNA catabolic process K06950,K09163 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 283.0
PJD3_k127_3409761_5 PDZ domain - - - 0.0000000000000000000002447 105.0
PJD3_k127_3410023_0 nitrite reductase [NAD(P)H] activity K00158,K00363,K03809,K05710 - 1.2.3.3,1.6.5.2,1.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 477.0
PJD3_k127_3410023_1 Ion transport protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004049 350.0
PJD3_k127_3410023_2 Peptidase family M1 domain K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 347.0
PJD3_k127_3410023_3 SAM (And some other nucleotide) binding motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000005808 236.0
PJD3_k127_3410023_4 methyltransferase activity - - - 0.000000000000000000000000000000006561 135.0
PJD3_k127_3410023_5 ArsC family K00537 - 1.20.4.1 0.00000000000004392 76.0
PJD3_k127_3424965_0 3'-5' exonuclease K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008245 330.0
PJD3_k127_3424965_1 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 311.0
PJD3_k127_3424965_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006281 293.0
PJD3_k127_3424965_3 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000000000000000000000002613 192.0
PJD3_k127_3424965_4 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000189 172.0
PJD3_k127_3424965_5 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000026 153.0
PJD3_k127_3424965_6 metal-sulfur cluster biosynthetic - - - 0.000000000000000000000000008788 112.0
PJD3_k127_3424965_7 Matrixin - - - 0.00000000000000000000004448 109.0
PJD3_k127_3424965_8 Protein conserved in bacteria - - - 0.000000000001309 72.0
PJD3_k127_3430492_0 Elongation factor G, domain IV K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007841 467.0
PJD3_k127_3430492_1 phosphorelay signal transduction system K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 380.0
PJD3_k127_3430492_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 306.0
PJD3_k127_3430492_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000001612 139.0
PJD3_k127_3430492_5 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00004567 47.0
PJD3_k127_3438150_0 Dipeptidyl peptidase IV (DPP IV) K01278 - 3.4.14.5 4.261e-261 825.0
PJD3_k127_3438150_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 425.0
PJD3_k127_3438150_2 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 344.0
PJD3_k127_3438150_3 PspA/IM30 family K03969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002992 275.0
PJD3_k127_3438150_4 - - - - 0.000000000000000000000000000000000006939 141.0
PJD3_k127_3455575_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 423.0
PJD3_k127_3455575_1 Diacylglycerol kinase K19302 - 3.6.1.27 0.0000000000000000000001119 110.0
PJD3_k127_3462571_1 WD40-like Beta Propeller Repeat - - - 0.00004269 48.0
PJD3_k127_3479173_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K09461 - 1.14.13.40 0.0 1032.0
PJD3_k127_3479173_1 NADH oxidase - - - 4.946e-207 653.0
PJD3_k127_3479173_10 SAM-dependent K06969 - 2.1.1.191 0.00000000000000000000000000000001721 129.0
PJD3_k127_3479173_11 Tetratricopeptide repeats - - - 0.0008457 51.0
PJD3_k127_3479173_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 470.0
PJD3_k127_3479173_3 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 413.0
PJD3_k127_3479173_4 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004785 347.0
PJD3_k127_3479173_5 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006084,GO:0006139,GO:0006163,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009117,GO:0009150,GO:0009259,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019442,GO:0019637,GO:0019693,GO:0019752,GO:0020037,GO:0022607,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043603,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051186,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0072521,GO:0097159,GO:1901135,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 311.0
PJD3_k127_3479173_6 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000148 287.0
PJD3_k127_3479173_7 enoyl-CoA hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002708 282.0
PJD3_k127_3479173_8 Belongs to the short-chain dehydrogenases reductases (SDR) family K00019,K07535 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000004885 233.0
PJD3_k127_3479173_9 endoribonuclease L-PSP - - - 0.0000000000000000000000000000000001242 136.0
PJD3_k127_3483905_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 543.0
PJD3_k127_3483905_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 392.0
PJD3_k127_3483905_2 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009347 252.0
PJD3_k127_3483905_3 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001079 249.0
PJD3_k127_3483905_4 - - - - 0.000000000000001207 79.0
PJD3_k127_3499078_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007609 335.0
PJD3_k127_3499078_1 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000002062 103.0
PJD3_k127_3499078_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000004704 99.0
PJD3_k127_351623_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 3.029e-236 770.0
PJD3_k127_351623_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000006985 202.0
PJD3_k127_3517830_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 541.0
PJD3_k127_3523210_0 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000001787 134.0
PJD3_k127_3523210_1 spectrin binding - - - 0.000000000008688 76.0
PJD3_k127_3527067_0 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 360.0
PJD3_k127_3527067_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004406 312.0
PJD3_k127_3527067_2 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000005326 260.0
PJD3_k127_3527067_3 - - - - 0.000000049 57.0
PJD3_k127_3532490_0 and related - - - 0.00000000000000000000000000000000000000000000000001081 188.0
PJD3_k127_3532490_1 oligoendopeptidase F K08602 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000000009481 126.0
PJD3_k127_3536198_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002777 232.0
PJD3_k127_3538140_0 Cytochrome c K07243 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 323.0
PJD3_k127_3538140_1 Two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000172 255.0
PJD3_k127_3538140_2 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000002843 201.0
PJD3_k127_3538140_3 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000003007 78.0
PJD3_k127_3538140_4 diacylglycerol kinase, catalytic region - - - 0.00000009685 55.0
PJD3_k127_3573624_0 Beta-ketoacyl synthase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003364 228.0
PJD3_k127_3573624_1 Beta-ketoacyl synthase, N-terminal domain - - - 0.000000000000000000000002101 109.0
PJD3_k127_3577762_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 4.823e-280 885.0
PJD3_k127_3577762_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 395.0
PJD3_k127_3577762_2 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002605 244.0
PJD3_k127_3577762_3 EVE domain - - - 0.0000000000000000000000000000005565 125.0
PJD3_k127_3584581_0 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007689 414.0
PJD3_k127_3584581_1 Predicted permease K07089 - - 0.00000000000000000001724 94.0
PJD3_k127_3588663_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 346.0
PJD3_k127_3588663_1 pyridoxamine 5'-phosphate oxidase-related FMN-binding K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000945 192.0
PJD3_k127_358906_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000001462 93.0
PJD3_k127_358906_1 - - - - 0.0000001722 53.0
PJD3_k127_3589068_0 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 1e-323 1011.0
PJD3_k127_3589068_1 cellular manganese ion homeostasis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 367.0
PJD3_k127_3589068_10 - - - - 0.0005673 46.0
PJD3_k127_3589068_2 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002392 269.0
PJD3_k127_3589068_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000003667 224.0
PJD3_k127_3589068_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000002041 140.0
PJD3_k127_3589068_5 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000004922 119.0
PJD3_k127_3589068_6 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000000000002914 90.0
PJD3_k127_3589068_7 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides K08281 - 3.5.1.19 0.0000000000000003777 85.0
PJD3_k127_3589068_8 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000001079 66.0
PJD3_k127_3589068_9 Putative zinc-finger - - - 0.0002327 51.0
PJD3_k127_3592930_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 433.0
PJD3_k127_3592930_1 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.000000000000000000000000000000000000000000000000000000000000389 218.0
PJD3_k127_3592930_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000002934 216.0
PJD3_k127_3592930_3 Methyltransferase small domain K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000009622 194.0
PJD3_k127_3592930_4 general secretion pathway protein K02456,K02650,K02679,K08084 - - 0.000000000000000000000000000000008974 134.0
PJD3_k127_3592930_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000001123 138.0
PJD3_k127_3592930_6 Binds the 23S rRNA K02909 - - 0.000000000000000000000003418 104.0
PJD3_k127_3592930_7 Curli production assembly/transport component CsgG - - - 0.000004152 58.0
PJD3_k127_3592930_8 Control of competence regulator ComK, YlbF/YmcA - - - 0.0001689 46.0
PJD3_k127_3606606_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001444 274.0
PJD3_k127_3606606_1 Phosphoribosyl transferase domain - - - 0.000000000000000000000000001046 121.0
PJD3_k127_3607178_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 503.0
PJD3_k127_3607178_1 radical SAM domain protein K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 438.0
PJD3_k127_3607178_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 427.0
PJD3_k127_3607178_3 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.000000000000000000000000000000004399 130.0
PJD3_k127_3607178_4 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.0000000000000000000000000000005247 128.0
PJD3_k127_3607178_5 Protein involved in outer membrane biogenesis - - - 0.00000000000004274 86.0
PJD3_k127_3614161_0 4Fe-4S single cluster domain K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 296.0
PJD3_k127_3614161_1 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 295.0
PJD3_k127_3614161_2 Glycosyl transferases group 1 K13668 - 2.4.1.346 0.000000000000000000000000000000000000000000000000000838 200.0
PJD3_k127_3614161_3 Glycosyl transferases group 1 - - - 0.00000001577 66.0
PJD3_k127_3617216_0 Part of a membrane complex involved in electron transport K03614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 310.0
PJD3_k127_3617216_1 Part of a membrane complex involved in electron transport K03615 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001351 248.0
PJD3_k127_3629533_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006882 554.0
PJD3_k127_3629533_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 510.0
PJD3_k127_3629533_10 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000005694 229.0
PJD3_k127_3629533_11 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000002651 217.0
PJD3_k127_3629533_12 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000000000000008681 211.0
PJD3_k127_3629533_13 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000001621 195.0
PJD3_k127_3629533_14 Binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000000000000002261 164.0
PJD3_k127_3629533_15 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000005918 153.0
PJD3_k127_3629533_16 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000007011 151.0
PJD3_k127_3629533_17 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000005817 131.0
PJD3_k127_3629533_18 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000007886 122.0
PJD3_k127_3629533_19 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0008150,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000001007 117.0
PJD3_k127_3629533_2 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 438.0
PJD3_k127_3629533_20 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000003927 108.0
PJD3_k127_3629533_21 Formiminotransferase domain, N-terminal subdomain K13990 - 2.1.2.5,4.3.1.4 0.0000000000000000000003597 106.0
PJD3_k127_3629533_22 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000005942 97.0
PJD3_k127_3629533_23 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000004369 92.0
PJD3_k127_3629533_24 Ribosomal protein L30p/L7e K02907 - - 0.000000000000000001812 89.0
PJD3_k127_3629533_25 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000000000003344 72.0
PJD3_k127_3629533_26 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 0.0000001181 54.0
PJD3_k127_3629533_3 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007245 415.0
PJD3_k127_3629533_4 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005659 367.0
PJD3_k127_3629533_5 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 358.0
PJD3_k127_3629533_6 Metallopeptidase family M24 K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 338.0
PJD3_k127_3629533_7 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004377 257.0
PJD3_k127_3629533_8 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007807 245.0
PJD3_k127_3629533_9 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000002494 233.0
PJD3_k127_3646656_0 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005215 279.0
PJD3_k127_3646656_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000005678 148.0
PJD3_k127_3646656_3 Domain of unknown function (DUF4105) - - - 0.0007497 46.0
PJD3_k127_3648348_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 9.347e-216 681.0
PJD3_k127_3648348_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 519.0
PJD3_k127_3648348_10 PFAM Late competence development protein ComFB K02241 - - 0.000000000004207 72.0
PJD3_k127_3648348_2 Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 514.0
PJD3_k127_3648348_3 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 416.0
PJD3_k127_3648348_4 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 361.0
PJD3_k127_3648348_5 AIR synthase related protein, C-terminal domain K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000822 354.0
PJD3_k127_3648348_6 Competence protein K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001115 297.0
PJD3_k127_3648348_7 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000006303 226.0
PJD3_k127_3648348_8 - - - - 0.0000000000000000000000000138 122.0
PJD3_k127_3648348_9 Regulatory protein, FmdB family - - - 0.00000000000000000001993 94.0
PJD3_k127_364889_0 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 401.0
PJD3_k127_364889_1 Flavin-binding monooxygenase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 366.0
PJD3_k127_364889_2 Unextendable partial coding region - - - 0.000000000000000000000000000000000003306 137.0
PJD3_k127_364889_3 Flavin-binding monooxygenase-like K07222 - - 0.000000000000000000000002938 104.0
PJD3_k127_366105_0 Multicopper oxidase K04753 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006749 347.0
PJD3_k127_366105_1 Cytochrome c K00376,K02305,K17760 - 1.1.9.1,1.7.2.4 0.0000000000000000000000000000000000000000000000000000001048 210.0
PJD3_k127_366105_2 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000001341 161.0
PJD3_k127_366105_3 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000001298 138.0
PJD3_k127_366105_4 PFAM cytochrome c, class I K19713 - 1.8.2.2 0.00001041 57.0
PJD3_k127_3664011_0 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000123 158.0
PJD3_k127_3664011_1 Acetyltransferase (GNAT) family - - - 0.000000000000253 72.0
PJD3_k127_3664011_2 Protein conserved in bacteria - - - 0.00001036 48.0
PJD3_k127_3668275_0 Methyltransferase K06968 - 2.1.1.186 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008755 347.0
PJD3_k127_3668275_1 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000005983 213.0
PJD3_k127_368250_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1134.0
PJD3_k127_368250_1 Domain of unknown function (DUF5117) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 549.0
PJD3_k127_368250_2 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 474.0
PJD3_k127_368250_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000004061 213.0
PJD3_k127_368250_4 efflux transmembrane transporter activity - - - 0.000000000000000000005732 100.0
PJD3_k127_368250_5 Domain of unknown function (DUF4878) - - - 0.000003198 55.0
PJD3_k127_3694424_0 Thiamine pyrophosphate enzyme, central domain K00158 - 1.2.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000183 265.0
PJD3_k127_3694424_1 antibiotic catabolic process K18235 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000051 255.0
PJD3_k127_3694424_2 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000000000000001733 194.0
PJD3_k127_3694424_3 - - - - 0.000000000000000000000000000000000000000005289 161.0
PJD3_k127_3694424_4 - - - - 0.000000000000000000000000000000000001796 141.0
PJD3_k127_3694424_5 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000006594 126.0
PJD3_k127_3694424_6 - - - - 0.000000000000000204 89.0
PJD3_k127_3694424_7 Protein of unknown function (DUF1761) - - - 0.0000000000004087 75.0
PJD3_k127_3694424_8 Putative peptidoglycan binding domain - - - 0.00000001414 59.0
PJD3_k127_3696903_0 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006563 287.0
PJD3_k127_3696903_1 glycosylase i K01246 - 3.2.2.20 0.0000001715 53.0
PJD3_k127_3699219_0 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000173 153.0
PJD3_k127_3699219_1 Histidine kinase - - - 0.00000000000000000007426 97.0
PJD3_k127_3699219_2 pyridoxamine 5-phosphate - - - 0.00000003521 64.0
PJD3_k127_3718526_0 PFAM PspC domain - - - 0.00000000000000000003802 101.0
PJD3_k127_3718526_1 positive regulation of macromolecule biosynthetic process - - - 0.00000511 51.0
PJD3_k127_3724866_0 UDP binding domain K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 462.0
PJD3_k127_3724866_1 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000003955 208.0
PJD3_k127_3757775_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000002232 211.0
PJD3_k127_3757775_1 Uncharacterized protein conserved in bacteria (DUF2155) - - - 0.0000000000000001313 81.0
PJD3_k127_3757775_2 Recombinase zinc beta ribbon domain K06400 - - 0.00004737 53.0
PJD3_k127_3770315_0 Peptidase family M50 - - - 0.00000000000000000000000000000004403 132.0
PJD3_k127_3770315_1 - - - - 0.000000000000000000148 91.0
PJD3_k127_3777085_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009961 530.0
PJD3_k127_3777085_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005236 452.0
PJD3_k127_3777085_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 363.0
PJD3_k127_3777085_3 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 361.0
PJD3_k127_3777085_4 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 327.0
PJD3_k127_3777085_5 GlcNAc-PI de-N-acetylase K01463 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007893 288.0
PJD3_k127_3777085_6 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002286 261.0
PJD3_k127_3777085_7 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000002135 153.0
PJD3_k127_3793073_0 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II - - - 0.0000000000000000000000000000000000000001103 156.0
PJD3_k127_3793073_1 mannose-6-phosphate isomerase K01809 - 5.3.1.8 0.000000000000000000000000000000003315 140.0
PJD3_k127_3793073_2 mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.000000000000002951 79.0
PJD3_k127_3816791_0 Dihydroxyacetone kinase family K07030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 337.0
PJD3_k127_3816791_1 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000001368 158.0
PJD3_k127_3816791_2 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000004411 105.0
PJD3_k127_3816791_3 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000004844 79.0
PJD3_k127_3816791_4 - - - - 0.00001416 56.0
PJD3_k127_3829547_0 ADP-glyceromanno-heptose 6-epimerase activity K01784,K12454 - 5.1.3.10,5.1.3.2 0.00000000000000000000000000000000000000000000000000000000009454 205.0
PJD3_k127_3829547_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000004778 214.0
PJD3_k127_3829547_2 extracellular polysaccharide biosynthetic process K16554,K21473 - - 0.000000000001382 75.0
PJD3_k127_3829547_3 Glycosyl transferases group 1 - - - 0.0000000001778 73.0
PJD3_k127_3844691_0 NADH:flavin oxidoreductase / NADH oxidase family K00317 - 1.5.8.1,1.5.8.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 420.0
PJD3_k127_3849923_0 Malate synthase K01638 - 2.3.3.9 1.902e-233 734.0
PJD3_k127_3849923_1 Catalyzes the reversible formation of glyoxylate and succinate from isocitrate K01637 - 4.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 383.0
PJD3_k127_3849923_2 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 297.0
PJD3_k127_3852543_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 584.0
PJD3_k127_3852543_1 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006723 438.0
PJD3_k127_3852543_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000002003 244.0
PJD3_k127_3852543_3 Appr-1'-p processing enzyme - - - 0.00000000000000000000000000000000000000000000000000000000001335 213.0
PJD3_k127_3852543_4 Putative aminopeptidase - - - 0.000000000000000000000000000000000000000000005377 172.0
PJD3_k127_3852543_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000001356 145.0
PJD3_k127_3863695_0 Aminotransferase class I and II K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000001879 278.0
PJD3_k127_3863695_1 serine-type peptidase activity - - - 0.000000000000000000000328 97.0
PJD3_k127_3873478_0 - - - - 0.000000000000000009307 87.0
PJD3_k127_3874197_0 Aminotransferase class I and II K10206 - 2.6.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 426.0
PJD3_k127_3874197_1 Bacterial capsule synthesis protein PGA_cap - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002081 262.0
PJD3_k127_3874197_2 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000001942 143.0
PJD3_k127_3874197_3 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000007499 69.0
PJD3_k127_3874197_4 - - - - 0.00001268 56.0
PJD3_k127_3877105_0 PA domain - - - 0.0003787 53.0
PJD3_k127_3887639_0 ABC transporter transmembrane region K18889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 554.0
PJD3_k127_3887639_1 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000002138 235.0
PJD3_k127_3887639_2 hyperosmotic response - - - 0.0000006197 60.0
PJD3_k127_3887639_3 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000001064 52.0
PJD3_k127_3892847_0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000006925 158.0
PJD3_k127_3892847_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000003046 153.0
PJD3_k127_3892847_2 Bacillithiol biosynthesis BshC K22136 - - 0.000000000000000000000000000000000007592 152.0
PJD3_k127_3892847_3 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000004839 113.0
PJD3_k127_3898874_0 SURF1 family K14998 - - 0.0000000000000000001013 96.0
PJD3_k127_3906448_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.0 1305.0
PJD3_k127_3906448_1 Thymidine kinase K00857 - 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 291.0
PJD3_k127_3906448_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000005555 186.0
PJD3_k127_3906448_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000009938 183.0
PJD3_k127_3906448_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000008238 163.0
PJD3_k127_3906448_5 Biotin/lipoate A/B protein ligase family K03800 - 6.3.1.20 0.000000000000000000000000000000000006125 146.0
PJD3_k127_3906448_6 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000003837 103.0
PJD3_k127_3908234_0 enzyme of poly-gamma-glutamate biosynthesis (Capsule formation) K07282 - - 0.000000000000000000000000000000000000000000000000000000000006478 218.0
PJD3_k127_39196_0 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.000000000000000000000000000000000000000000000000000000000000004406 224.0
PJD3_k127_39196_1 MacB-like periplasmic core domain K09808 - - 0.000000000000000000000000000000000000000000000001371 179.0
PJD3_k127_3933586_0 PFAM von Willebrand factor type A - - - 0.0000000000000000000000000000001217 138.0
PJD3_k127_3938439_0 Fibronectin type 3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 388.0
PJD3_k127_3938439_1 - - - - 0.00006764 51.0
PJD3_k127_3947413_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008708 384.0
PJD3_k127_3947413_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829,K16020 GO:0003674,GO:0003824,GO:0003856,GO:0005488,GO:0005507,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0030312,GO:0040007,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.71,4.2.3.4 0.00000002468 57.0
PJD3_k127_3947468_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 479.0
PJD3_k127_3947468_1 - - - - 0.00000000000000000000000002848 119.0
PJD3_k127_3947468_2 Domain of unknown function (DUF4437) - - - 0.0000000000000000000000002291 113.0
PJD3_k127_3949761_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000006002 109.0
PJD3_k127_3949761_1 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000001305 101.0
PJD3_k127_3949761_2 Phospholipase D. Active site motifs. K06131 - - 0.0000000000000003431 85.0
PJD3_k127_3974153_0 TIGRFAM DNA polymerase III, alpha subunit K02337,K14162 - 2.7.7.7 2.84e-227 726.0
PJD3_k127_4011_0 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 371.0
PJD3_k127_4011_1 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 294.0
PJD3_k127_4011_2 Cys/Met metabolism PLP-dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000001066 230.0
PJD3_k127_4011_3 - - - - 0.000000000000000000000001775 110.0
PJD3_k127_4012419_0 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000037 139.0
PJD3_k127_4012419_1 - - - - 0.00000009437 57.0
PJD3_k127_401382_0 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000758 507.0
PJD3_k127_401382_1 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000009749 209.0
PJD3_k127_401382_2 metal-dependent phosphohydrolase, HD sub domain K03698 - - 0.000000000000000000000000000000000000000000000000000001926 205.0
PJD3_k127_401382_3 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000002307 188.0
PJD3_k127_401382_4 MerR HTH family regulatory protein - - - 0.000000000000000000000000000003946 132.0
PJD3_k127_401382_5 Sigma-54 interaction domain - - - 0.00000006482 59.0
PJD3_k127_4018714_0 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 319.0
PJD3_k127_4018714_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003374 275.0
PJD3_k127_4018714_2 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000001379 59.0
PJD3_k127_4028835_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005852 512.0
PJD3_k127_4028835_1 PFAM lipopolysaccharide biosynthesis protein - - - 0.00000000000002991 76.0
PJD3_k127_4031573_0 Ftsk_gamma K03466 - - 1.279e-205 650.0
PJD3_k127_4031573_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003658 538.0
PJD3_k127_4031573_2 Uncharacterised protein family UPF0102 K07460 - - 0.00000000000000000000000002762 114.0
PJD3_k127_4035825_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 421.0
PJD3_k127_4035825_1 FAD linked oxidases, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005832 396.0
PJD3_k127_4035825_2 Lycopene cyclase protein K10960,K21401 - 1.3.1.111,1.3.1.83,1.3.99.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002289 286.0
PJD3_k127_4035825_3 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000001428 250.0
PJD3_k127_4035825_4 Squalene/phytoene synthase K00801,K02291,K18163 - 2.5.1.21,2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000005131 206.0
PJD3_k127_4035825_5 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000006638 140.0
PJD3_k127_4035825_6 Predicted membrane protein (DUF2231) - - - 0.000000000001059 76.0
PJD3_k127_4035825_7 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000001832 56.0
PJD3_k127_4046934_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000003608 115.0
PJD3_k127_4053878_0 Glutamate-cysteine ligase family 2(GCS2) - - - 4.443e-207 662.0
PJD3_k127_4053878_1 NmrA-like family - - - 0.000000000000000000000000000000000000000000000002955 180.0
PJD3_k127_4053878_2 Lanthionine synthetase C family protein - - - 0.00000000000000000000000000000000000000000000008872 175.0
PJD3_k127_4053878_3 - - - - 0.000000000000000000000000000004681 128.0
PJD3_k127_4062629_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 9.936e-309 987.0
PJD3_k127_4062629_1 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 7.138e-242 764.0
PJD3_k127_4062629_2 Glycosyltransferase Family 4 K12995 - 2.4.1.348 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 348.0
PJD3_k127_4062629_3 endonuclease activity - - - 0.000000000000000000000000000000001503 137.0
PJD3_k127_4062629_4 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.00000000000000004364 87.0
PJD3_k127_4062944_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000001086 182.0
PJD3_k127_4062944_1 Tripartite ATP-independent periplasmic transporters, DctQ component K21394 - - 0.00000000000000002935 88.0
PJD3_k127_4062944_2 Short-chain dehydrogenase reductase sdr - - - 0.000000005139 57.0
PJD3_k127_4078039_0 UDP binding domain K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 565.0
PJD3_k127_4078039_1 UDP binding domain K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 549.0
PJD3_k127_4078039_2 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003999 441.0
PJD3_k127_4078039_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 331.0
PJD3_k127_4078039_4 O-acyltransferase activity K13018 - 2.3.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000002321 266.0
PJD3_k127_4078039_5 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.000000000000000000002377 97.0
PJD3_k127_4078802_0 efflux transmembrane transporter activity - - - 0.000000000000000001421 87.0
PJD3_k127_4080962_0 Nicastrin K01301 - 3.4.17.21 8.056e-209 672.0
PJD3_k127_4080962_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 460.0
PJD3_k127_4080962_2 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 316.0
PJD3_k127_4080962_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008148 320.0
PJD3_k127_4080962_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000004536 252.0
PJD3_k127_4080962_5 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009387 265.0
PJD3_k127_4080962_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000000005835 142.0
PJD3_k127_4093604_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 9.29e-274 869.0
PJD3_k127_4093604_1 Uncharacterized protein family (UPF0051) K09014 - - 3.968e-255 793.0
PJD3_k127_4093604_10 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000005344 102.0
PJD3_k127_4093604_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006317 550.0
PJD3_k127_4093604_3 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 447.0
PJD3_k127_4093604_4 ABC transporter K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 384.0
PJD3_k127_4093604_5 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009509 281.0
PJD3_k127_4093604_6 NifU-like N terminal domain K04488 - - 0.000000000000000000000000000000000000000000000001643 186.0
PJD3_k127_4093604_7 HTH domain - - - 0.0000000000000000000000000000000000000000001033 168.0
PJD3_k127_4093604_8 peptide deformylase activity K01462 - 3.5.1.88 0.00000000000000000000000000000000000002188 152.0
PJD3_k127_4093604_9 Disulphide isomerase - - - 0.000000000000000000000000000001137 123.0
PJD3_k127_4106155_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 435.0
PJD3_k127_4106155_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 342.0
PJD3_k127_4106155_2 Queuosine biosynthesis protein K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 323.0
PJD3_k127_4106155_3 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007931 314.0
PJD3_k127_4106155_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 315.0
PJD3_k127_4106155_5 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000003042 152.0
PJD3_k127_4106155_6 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000001199 109.0
PJD3_k127_4106155_7 Thiamine biosynthesis K03154 - - 0.0000000000004846 75.0
PJD3_k127_4106155_8 Preprotein translocase, YajC subunit K03210 - - 0.000000000000937 73.0
PJD3_k127_4114836_0 PFAM Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 334.0
PJD3_k127_4114836_1 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000849 199.0
PJD3_k127_4114836_2 Alpha/beta hydrolase family - - - 0.0000000000000000000000000005876 126.0
PJD3_k127_4114836_3 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000001142 107.0
PJD3_k127_412077_0 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000003703 256.0
PJD3_k127_412077_1 Alanine dehydrogenase/PNT, N-terminal domain - - - 0.00000000000000000000000000000000000001638 149.0
PJD3_k127_413148_0 DNA-templated transcription, initiation K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000000000000007405 132.0
PJD3_k127_413148_1 Glucose inhibited division protein A K21401 - 1.3.99.38 0.000000000000000000000000004964 116.0
PJD3_k127_4138001_0 E1-E2 ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 533.0
PJD3_k127_4138001_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K22110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 324.0
PJD3_k127_4138001_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002655 246.0
PJD3_k127_4138001_3 Histidine kinase K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000005286 215.0
PJD3_k127_4138001_4 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000001868 163.0
PJD3_k127_4138001_5 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.0000000000000000000000000000000002418 140.0
PJD3_k127_4138001_6 glucose sorbosone - - - 0.0000000000001343 81.0
PJD3_k127_4138001_7 Universal stress protein family K07090 - - 0.00000000005475 74.0
PJD3_k127_4138001_8 Protein of unknown function (DUF2892) - - - 0.000000004276 61.0
PJD3_k127_4138001_9 hydrolase K01048 - 3.1.1.5 0.0003157 46.0
PJD3_k127_4139334_0 arylsulfatase A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 370.0
PJD3_k127_4139334_1 Phosphotriesterase family K07048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 294.0
PJD3_k127_4139992_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K18688 - 6.2.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 525.0
PJD3_k127_4140330_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 9.648e-308 974.0
PJD3_k127_4140330_1 Rhodanese Homology Domain K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000766 332.0
PJD3_k127_4140330_2 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000005244 160.0
PJD3_k127_4140330_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000004478 132.0
PJD3_k127_4140330_4 HEAT repeats - - - 0.000000001495 70.0
PJD3_k127_4166379_0 Molydopterin dinucleotide binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 443.0
PJD3_k127_4167591_0 argininosuccinate synthase activity K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006846 468.0
PJD3_k127_4167591_1 argininosuccinate lyase K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004228 406.0
PJD3_k127_4167591_2 arginine binding K03402 GO:0000820,GO:0000821,GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006259,GO:0006310,GO:0006355,GO:0006520,GO:0006521,GO:0006525,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016043,GO:0016597,GO:0019219,GO:0019222,GO:0019752,GO:0022607,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031333,GO:0031334,GO:0031406,GO:0032991,GO:0032993,GO:0033238,GO:0033241,GO:0034214,GO:0034618,GO:0034641,GO:0036094,GO:0042150,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043254,GO:0043436,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044424,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051259,GO:0060255,GO:0062012,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140110,GO:1900079,GO:1900081,GO:1901360,GO:1901363,GO:1901564,GO:1901605,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2000144,GO:2000282,GO:2001141 - 0.00000000000000000000005491 105.0
PJD3_k127_4170008_0 Bacterial regulatory proteins, tetR family K16137 - - 0.000000000000000000000000000000000000000000000000000000000001288 220.0
PJD3_k127_4170008_1 MacB-like periplasmic core domain - - - 0.0000000001824 64.0
PJD3_k127_4191067_0 Protein of unknown function (DUF3145) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 305.0
PJD3_k127_4197301_0 3-oxoacyl-[acyl-carrier-protein] synthase activity K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000009652 272.0
PJD3_k127_4197301_1 chromosome segregation - - - 0.00000000000000000000000002958 110.0
PJD3_k127_4197783_0 Belongs to the glycosyl hydrolase 31 family K07407 - 3.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 368.0
PJD3_k127_4197783_1 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000143 174.0
PJD3_k127_4197783_2 ATP-independent chaperone mediated protein folding - - - 0.0000000000000000000000000000000000003384 147.0
PJD3_k127_4197783_3 WHG domain - - - 0.00000000000003939 78.0
PJD3_k127_4210903_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 429.0
PJD3_k127_4210903_1 - - - - 0.000000000007023 66.0
PJD3_k127_4237712_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 343.0
PJD3_k127_4237712_1 myo-inosose-2 dehydratase activity - - - 0.00000000000000000000000000000000000003692 155.0
PJD3_k127_4239284_0 Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000002111 188.0
PJD3_k127_4239284_1 - - - - 0.00000000000000000000000000000000002008 141.0
PJD3_k127_426612_0 - - - - 0.00000000000000000000000000000000000000000000000000001379 197.0
PJD3_k127_426612_1 Copper binding proteins, plastocyanin/azurin family - - - 0.000000000000382 77.0
PJD3_k127_4267901_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009578 584.0
PJD3_k127_4267901_1 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009958 276.0
PJD3_k127_4267901_2 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001831 263.0
PJD3_k127_4267901_3 creatininase K01470,K22232 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000004022 213.0
PJD3_k127_4267901_4 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000744 127.0
PJD3_k127_4272085_0 COG0524 Sugar kinases, ribokinase K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000667 273.0
PJD3_k127_4272085_1 - - - - 0.00000000000000003361 83.0
PJD3_k127_4282159_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000105 235.0
PJD3_k127_4282159_1 negative regulation of transcription, DNA-templated - - - 0.00000000000004554 74.0
PJD3_k127_4284498_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 3.206e-262 826.0
PJD3_k127_4284498_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 541.0
PJD3_k127_4284498_2 Domain of unknown function (DUF3536) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 507.0
PJD3_k127_4284498_3 Domain of unknown function (DUF1925) K22451 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000069 428.0
PJD3_k127_4284498_4 Belongs to the glycosyl hydrolase 57 family K03406,K16149 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0071704,GO:1901576 2.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009892 436.0
PJD3_k127_4284498_5 aminopeptidase activity K07004 - - 0.000000000000000000000000000000000000000000000000008919 206.0
PJD3_k127_4284498_6 WD40 repeats - - - 0.00000000000000000000000000008627 135.0
PJD3_k127_428831_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 1.126e-203 644.0
PJD3_k127_428831_1 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000637 580.0
PJD3_k127_428831_10 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000004102 216.0
PJD3_k127_428831_11 Glycine cleavage T-protein C-terminal barrel domain K06980 - - 0.00000000000000000000000000000000007697 146.0
PJD3_k127_428831_12 FAD binding domain K11472 - - 0.0000000000000000000000000000000001607 149.0
PJD3_k127_428831_13 ATP-dependent protease La (LON) substrate-binding domain K01338 - 3.4.21.53 0.0000000000000000000000000000000003091 141.0
PJD3_k127_428831_14 PFAM NAD dependent epimerase dehydratase family - - - 0.000000000000000000000000000007508 131.0
PJD3_k127_428831_15 Phosphoglycerate mutase family K08296 - - 0.000000000000003831 81.0
PJD3_k127_428831_2 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 562.0
PJD3_k127_428831_3 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 509.0
PJD3_k127_428831_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 437.0
PJD3_k127_428831_5 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 409.0
PJD3_k127_428831_6 4Fe-4S binding domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004092 360.0
PJD3_k127_428831_7 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 300.0
PJD3_k127_428831_8 UreE urease accessory protein, C-terminal domain K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000003578 266.0
PJD3_k127_428831_9 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000003286 269.0
PJD3_k127_4318318_0 Type VI secretion system effector, Hcp K11903 - - 0.000000000000001179 84.0
PJD3_k127_433522_0 Multicopper K04753 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 314.0
PJD3_k127_4345530_0 DHH family K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007801 486.0
PJD3_k127_4345530_1 Phosphate acetyl/butaryl transferase K00625 - 2.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 312.0
PJD3_k127_4345530_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000007979 238.0
PJD3_k127_4345530_3 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000612 203.0
PJD3_k127_4345530_4 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000002826 157.0
PJD3_k127_4345530_5 STAS domain K04749 - - 0.000000000000000000000000000000000004055 140.0
PJD3_k127_4345530_6 Zn-ribbon protein possibly nucleic acid-binding K07164 - - 0.0000000000000001566 88.0
PJD3_k127_4345530_7 Histidine kinase-like ATPase domain - - - 0.00000000000002666 79.0
PJD3_k127_4349016_0 Polysaccharide biosynthesis/export protein - - - 1.146e-259 824.0
PJD3_k127_4349016_1 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 355.0
PJD3_k127_4349016_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000009824 124.0
PJD3_k127_4349016_3 Sulfotransferase family - - - 0.00000000000000000001047 102.0
PJD3_k127_4349363_0 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 GO:0000271,GO:0005575,GO:0005623,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0030288,GO:0030313,GO:0031975,GO:0033692,GO:0034637,GO:0034645,GO:0042597,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0051273,GO:0051274,GO:0071704,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 531.0
PJD3_k127_4349363_1 PFAM Glycosyl transferase, family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.000000000000000007216 86.0
PJD3_k127_4360808_0 synthetase K01907 - 6.2.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 501.0
PJD3_k127_4388033_0 alpha beta - - - 0.000000005777 59.0
PJD3_k127_4400064_0 Oxidoreductase molybdopterin binding domain K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 430.0
PJD3_k127_4400064_1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009331 292.0
PJD3_k127_4400064_2 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000006332 233.0
PJD3_k127_4400064_3 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.0000000000000000000000000000000000000000000000004985 187.0
PJD3_k127_4401542_0 Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily K03615 - - 0.000000000000000000000000000000000000000005065 162.0
PJD3_k127_4401542_1 Trypsin-like peptidase domain - - - 0.00000000000000000000000004206 109.0
PJD3_k127_4407555_1 EcsC protein family - - - 0.0000000000004289 72.0
PJD3_k127_4407555_3 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.0000001694 63.0
PJD3_k127_4408863_0 aminopeptidase activity K07004 - - 0.00000000000000000000000000000000000000000000000000000000004916 220.0
PJD3_k127_440986_0 Bacterial membrane protein, YfhO - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 447.0
PJD3_k127_440986_1 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 364.0
PJD3_k127_440986_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000371 192.0
PJD3_k127_4411433_0 Rieske-like [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 304.0
PJD3_k127_4411433_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004178 251.0
PJD3_k127_4411433_2 Acyl-transferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000002694 211.0
PJD3_k127_4411433_3 - - - - 0.0000000000000000000000000000000000002898 154.0
PJD3_k127_4411433_4 DinB family - - - 0.000000001473 67.0
PJD3_k127_4417711_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000002533 187.0
PJD3_k127_4417711_1 Malate synthase K01638 - 2.3.3.9 0.0000007266 57.0
PJD3_k127_4421258_0 PFAM magnesium chelatase ChlI subunit K07391 - - 6.195e-197 630.0
PJD3_k127_4421258_1 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 600.0
PJD3_k127_4421258_2 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000000000000002591 149.0
PJD3_k127_4421258_4 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000001808 138.0
PJD3_k127_4421258_5 nitric oxide dioxygenase activity - - - 0.00000000000000000003963 97.0
PJD3_k127_4421258_6 - - - - 0.000000000000000005991 84.0
PJD3_k127_4421258_7 SnoaL-like domain - - - 0.00000002416 63.0
PJD3_k127_4453588_0 POT family K03305 - - 9.581e-208 661.0
PJD3_k127_4453588_1 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000004288 192.0
PJD3_k127_4453588_2 Copper chaperone PCu(A)C K03619,K07152,K09796 GO:0003674,GO:0005048,GO:0005488,GO:0033218,GO:0042277 - 0.00000000000000000000000000000000000000000003387 169.0
PJD3_k127_4453588_3 cytochrome c oxidase K02351,K02862 - - 0.000000000000000000000000000000000000002077 160.0
PJD3_k127_4453588_4 Copper chaperone PCu(A)C K09796 - - 0.00000000000000000003978 98.0
PJD3_k127_4453588_5 - - - - 0.000000000000009792 82.0
PJD3_k127_4455221_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003294 278.0
PJD3_k127_4455221_1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000006122 93.0
PJD3_k127_4455221_3 - - - - 0.00005972 45.0
PJD3_k127_4472486_0 AIR synthase related protein, C-terminal domain K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000009259 221.0
PJD3_k127_4472486_1 cysteine desulfurase family protein - - - 0.0000000000000000008476 87.0
PJD3_k127_4500376_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000001064 206.0
PJD3_k127_4500376_2 Belongs to the universal stress protein A family - - - 0.0000000000000000000005725 112.0
PJD3_k127_4500376_3 Amino acid permease - - - 0.00000000000000003926 96.0
PJD3_k127_4551568_0 B12 binding domain K00548 - 2.1.1.13 0.0 1262.0
PJD3_k127_4551568_1 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 2.425e-227 722.0
PJD3_k127_4551568_2 B12 binding domain K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 461.0
PJD3_k127_4551568_3 Acyl-CoA dehydrogenase, C-terminal domain K00248,K09478 - 1.3.8.1,1.3.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 437.0
PJD3_k127_4551568_4 YGGT family K02221 - - 0.0000000000000000000000000001579 123.0
PJD3_k127_4551568_5 DUF167 K09131 - - 0.0000000000000005308 88.0
PJD3_k127_4551568_6 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K03921 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0009605,GO:0009607,GO:0016020,GO:0030312,GO:0040007,GO:0043207,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071944,GO:0075136 1.14.19.11,1.14.19.2,1.14.19.26 0.000007112 48.0
PJD3_k127_4551568_7 PFAM Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0002665 52.0
PJD3_k127_4569097_0 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 361.0
PJD3_k127_4570093_0 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005922 276.0
PJD3_k127_4570093_1 NmrA-like family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000007524 202.0
PJD3_k127_4589917_0 Sodium:solute symporter family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000006716 232.0
PJD3_k127_4598997_0 Oxidoreductase - - - 7.428e-245 766.0
PJD3_k127_4598997_1 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 439.0
PJD3_k127_4598997_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004102 282.0
PJD3_k127_4598997_3 hydroperoxide reductase activity - - - 0.0000000000000000000000000000001255 126.0
PJD3_k127_4598997_4 hydroperoxide reductase activity - - - 0.00000000000000000187 87.0
PJD3_k127_4598997_5 Glycine cleavage T-protein C-terminal barrel domain - - - 0.000001602 51.0
PJD3_k127_4606649_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 323.0
PJD3_k127_4606649_1 - - - - 0.000000000007767 74.0
PJD3_k127_4609896_0 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 419.0
PJD3_k127_4609896_1 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005325 373.0
PJD3_k127_4609896_2 - - - - 0.00000000000000000000000000000000000000000000000009255 186.0
PJD3_k127_4620105_0 Sulfatase - - - 0.0000000000000000000000000000000000003242 149.0
PJD3_k127_4646791_0 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 315.0
PJD3_k127_4646791_1 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000000000000000000000007928 117.0
PJD3_k127_4650607_0 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 317.0
PJD3_k127_4650607_1 - - - - 0.0000000000007392 75.0
PJD3_k127_4663288_0 Phosphotransferase enzyme family - - - 5.797e-263 844.0
PJD3_k127_4663288_1 - - - - 0.000000000000000000000001122 116.0
PJD3_k127_4663288_2 Peptidase M1, membrane alanine aminopeptidase - - - 0.00009953 54.0
PJD3_k127_4668963_0 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 290.0
PJD3_k127_4668963_1 - - - - 0.00000001451 57.0
PJD3_k127_4673070_0 DALR_2 K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005845 444.0
PJD3_k127_4673070_2 - - - - 0.000002807 51.0
PJD3_k127_46881_0 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.0000000000000000000000000000000000000000000000000000000000000000000000003093 253.0
PJD3_k127_46881_1 DinB family - - - 0.00000000000000000000000000000000000000000000000000000007116 207.0
PJD3_k127_46881_2 DoxX-like family - - - 0.0000000000000000000000000000000000000003432 154.0
PJD3_k127_46891_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 588.0
PJD3_k127_46891_1 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007878 533.0
PJD3_k127_46891_10 Domain of unknown function (DUF4332) - - - 0.0000000000000000000000000000000005856 136.0
PJD3_k127_46891_11 Protein conserved in bacteria - - - 0.00000000000000000000002946 110.0
PJD3_k127_46891_12 Septum formation initiator K05589 - - 0.000000000009871 72.0
PJD3_k127_46891_13 MerT mercuric transport protein K08363 - - 0.000000002614 65.0
PJD3_k127_46891_2 OmpA family K02557,K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003925 375.0
PJD3_k127_46891_3 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000002369 257.0
PJD3_k127_46891_4 chlorophyll binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003658 263.0
PJD3_k127_46891_5 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000018 183.0
PJD3_k127_46891_6 Protein of unknown function, DUF481 K07283 - - 0.000000000000000000000000000000000000000000000007218 180.0
PJD3_k127_46891_7 GTP binding - - - 0.0000000000000000000000000000000000000000000003671 172.0
PJD3_k127_46891_8 Protein of unknown function, DUF - - - 0.00000000000000000000000000000000000003275 151.0
PJD3_k127_46891_9 antibiotic catabolic process K18235 - - 0.00000000000000000000000000000000002103 135.0
PJD3_k127_4689654_0 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 543.0
PJD3_k127_4689654_1 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 334.0
PJD3_k127_4689654_10 protein kinase activity - - - 0.00008874 46.0
PJD3_k127_4689654_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001317 279.0
PJD3_k127_4689654_3 HD domain K07023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001985 247.0
PJD3_k127_4689654_4 Belongs to the acetyltransferase family. ArgA subfamily - - - 0.00000000000000000000000000000000000000000000000000001406 199.0
PJD3_k127_4689654_5 DinB family - - - 0.000000000000000000000000000000001618 135.0
PJD3_k127_4689654_6 - - - - 0.000000000000000000001395 101.0
PJD3_k127_4689654_7 Protein of unknown function (DUF1579) - - - 0.0000000000000006341 83.0
PJD3_k127_4689654_9 Cupin 2, conserved barrel domain protein - - - 0.00007828 46.0
PJD3_k127_4705358_0 Peptidase family M1 domain - - - 3.899e-245 773.0
PJD3_k127_4705358_1 belongs to the aldehyde dehydrogenase family K00128 GO:0003674,GO:0003824,GO:0004029,GO:0006081,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0044237,GO:0055114,GO:0071704 1.2.1.3 1.22e-201 647.0
PJD3_k127_4705358_2 Belongs to the GcvT family K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 446.0
PJD3_k127_4705358_3 xanthine dehydrogenase activity K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 295.0
PJD3_k127_4705358_4 Cold shock K03704 - - 0.000000000000000000000000000000001964 132.0
PJD3_k127_4705358_5 Cold shock K03704 - - 0.0000000000000000000000000000000103 131.0
PJD3_k127_4729647_0 Nickel-dependent hydrogenase K14126 - 1.8.98.5 4.513e-218 691.0
PJD3_k127_4729647_1 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 376.0
PJD3_k127_4729647_2 spore germination K03605 - - 0.000000000000000000000001627 109.0
PJD3_k127_4729647_3 Peptidase family M28 - - - 0.000000000001744 72.0
PJD3_k127_4729647_4 PFAM Cyclic nucleotide-binding domain - - - 0.00000008695 61.0
PJD3_k127_4768896_0 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 528.0
PJD3_k127_4776394_0 PQQ-like domain K00114,K17760,K21676 - 1.1.2.8,1.1.9.1,1.17.2.2 2.18e-242 767.0
PJD3_k127_4776394_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000001319 196.0
PJD3_k127_4776394_2 protein kinase activity - - - 0.0000000000000000003167 89.0
PJD3_k127_4787988_0 Nitrate reductase cytochrome c-type subunit (NapB) K02568 - - 0.00000000000000000000002184 104.0
PJD3_k127_4787988_1 Domain of unknown function (DUF5107) - - - 0.000000000001792 70.0
PJD3_k127_4805768_0 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 398.0
PJD3_k127_4828483_0 Ion transport protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000002606 205.0
PJD3_k127_4828483_1 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000002443 167.0
PJD3_k127_4833362_0 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007652 332.0
PJD3_k127_4833362_1 COG0657 Esterase lipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 307.0
PJD3_k127_4903631_0 Cytochrome c-type biogenesis protein CcmF C-terminal K02198 - - 3.307e-255 803.0
PJD3_k127_4903631_1 Belongs to the carbamoyltransferase HypF family K04656 - - 6.187e-212 683.0
PJD3_k127_4903631_2 hydrogenase expression formation protein HypD K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 529.0
PJD3_k127_4903631_3 AIR synthase related protein, C-terminal domain K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 395.0
PJD3_k127_4903631_4 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.00000000000000000000000000000000000000000000000000000000000007061 218.0
PJD3_k127_4903631_5 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000008244 161.0
PJD3_k127_4903631_6 - - - - 0.0000000000000000000000000000005449 132.0
PJD3_k127_4903631_7 subunit of a heme lyase K02200 - - 0.00000000000000000000000005517 116.0
PJD3_k127_4903631_8 HupF/HypC family K04653 - - 0.000000000000000000000007162 105.0
PJD3_k127_4903631_9 - - - - 0.000000000003674 70.0
PJD3_k127_494273_0 Peptidase family M3 K08602 - - 2.036e-215 683.0
PJD3_k127_494273_1 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007982 347.0
PJD3_k127_494273_2 Binding-protein-dependent transport system inner membrane component K02011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000309 247.0
PJD3_k127_494273_3 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000002927 70.0
PJD3_k127_4943114_0 polysaccharide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000002293 219.0
PJD3_k127_4943114_1 polysaccharide biosynthetic process - - - 0.000000000000000000000000000000000004243 153.0
PJD3_k127_4943716_0 Peptidase of plants and bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007389 397.0
PJD3_k127_4957613_0 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006703 491.0
PJD3_k127_4965313_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 444.0
PJD3_k127_4965313_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000005149 225.0
PJD3_k127_4965313_2 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000001346 223.0
PJD3_k127_4965313_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000001518 207.0
PJD3_k127_4965313_4 Zinc finger domain - - - 0.0000000001874 69.0
PJD3_k127_4965313_5 rRNA binding K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000128 54.0
PJD3_k127_4966832_0 Phosphoribosyl transferase domain K07101 - - 0.0000000000000000000000000000000000000000002297 167.0
PJD3_k127_4969704_0 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000003585 218.0
PJD3_k127_4969704_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000005251 100.0
PJD3_k127_4969704_2 arylsulfatase A - - - 0.000002746 49.0
PJD3_k127_498202_0 RNA recognition motif - - - 0.000000000000000000000000000000000000002693 150.0
PJD3_k127_4986808_0 - - - - 0.000000000000000000000000000000000000001092 151.0
PJD3_k127_4991925_0 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006072 346.0
PJD3_k127_4991925_1 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000000004243 139.0
PJD3_k127_4991925_2 DinB family - - - 0.000000000006925 66.0
PJD3_k127_5001859_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 3.063e-274 856.0
PJD3_k127_5001859_1 Putative ATP-binding cassette K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004412 513.0
PJD3_k127_5001859_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 352.0
PJD3_k127_5001859_3 Transglutaminase/protease-like homologues - - - 0.0000000000000000001155 103.0
PJD3_k127_5001859_4 Tetratricopeptide repeat - - - 0.000000000002556 77.0
PJD3_k127_5001859_5 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.0000008985 60.0
PJD3_k127_5014975_0 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001714 251.0
PJD3_k127_5014975_1 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.0000000000000000000000000000000000000000000000000000000000000000001014 233.0
PJD3_k127_5026740_0 copper-translocating P-type ATPase K01533 - 3.6.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009665 320.0
PJD3_k127_5026740_1 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K06898,K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 297.0
PJD3_k127_5026740_2 - - - - 0.000000000000000000000000002059 122.0
PJD3_k127_5026740_4 Tetratricopeptide repeat - - - 0.0000958 55.0
PJD3_k127_5026740_5 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 - 4.2.3.1 0.0006693 43.0
PJD3_k127_5029534_0 - - - - 0.000000000000000000000000000000000000000005469 162.0
PJD3_k127_5029534_1 SnoaL-like polyketide cyclase - - - 0.00000000000001774 74.0
PJD3_k127_5033751_0 dTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.000000000000000000000000003995 117.0
PJD3_k127_5047419_0 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 538.0
PJD3_k127_5056528_0 Transcriptional regulator PadR-like family - - - 0.00004545 51.0
PJD3_k127_5064001_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 4.662e-220 708.0
PJD3_k127_5064001_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 578.0
PJD3_k127_5064001_10 Diguanylate cyclase - - - 0.0000000000000000000000000000002885 141.0
PJD3_k127_5064001_2 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 552.0
PJD3_k127_5064001_3 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 509.0
PJD3_k127_5064001_4 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 421.0
PJD3_k127_5064001_5 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004938 403.0
PJD3_k127_5064001_6 Phage integrase, N-terminal SAM-like domain K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 302.0
PJD3_k127_5064001_7 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000002987 257.0
PJD3_k127_5064001_8 Probable molybdopterin binding domain K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000007278 199.0
PJD3_k127_5064001_9 - - - - 0.000000000000000000000000000000005799 139.0
PJD3_k127_5066336_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005916 283.0
PJD3_k127_5066336_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000001015 131.0
PJD3_k127_5074234_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 590.0
PJD3_k127_5074234_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 574.0
PJD3_k127_5074234_2 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 322.0
PJD3_k127_5074234_3 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 324.0
PJD3_k127_5074234_4 Glycosyl hydrolase family 3 N terminal domain K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002925 288.0
PJD3_k127_5074234_5 Trypsin-like peptidase domain K08372 - - 0.0003157 46.0
PJD3_k127_5074888_0 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 411.0
PJD3_k127_5074888_1 ABC-2 family transporter protein K01992 - - 0.0000000000000000000001438 111.0
PJD3_k127_5080824_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 5.369e-229 739.0
PJD3_k127_5080824_1 Domain in cystathionine beta-synthase and other proteins. K01697 - 4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 590.0
PJD3_k127_5080824_10 Rhomboid family - - - 0.00000000000000000000000000000000001299 147.0
PJD3_k127_5080824_11 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000001049 118.0
PJD3_k127_5080824_12 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000245 112.0
PJD3_k127_5080824_13 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000384 92.0
PJD3_k127_5080824_14 Ribosomal protein L34 K02914 - - 0.00000000000000002729 83.0
PJD3_k127_5080824_15 Sporulation related domain - - - 0.00000000000000005381 93.0
PJD3_k127_5080824_16 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000001822 70.0
PJD3_k127_5080824_17 Iron-binding zinc finger CDGSH type - - - 0.00000003163 63.0
PJD3_k127_5080824_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 387.0
PJD3_k127_5080824_3 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000084 375.0
PJD3_k127_5080824_4 Zn-dependent protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 364.0
PJD3_k127_5080824_5 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 365.0
PJD3_k127_5080824_6 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004298 353.0
PJD3_k127_5080824_7 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008763 247.0
PJD3_k127_5080824_8 NUDIX domain K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000003501 198.0
PJD3_k127_5080824_9 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000002091 201.0
PJD3_k127_508403_0 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002888 451.0
PJD3_k127_508403_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007169 400.0
PJD3_k127_508403_10 Tetratricopeptide repeat - - - 0.00002588 55.0
PJD3_k127_508403_11 distant relative of homeotic protein bithoraxoid K07131 - - 0.0002789 50.0
PJD3_k127_508403_2 Bacterial dnaA protein K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 317.0
PJD3_k127_508403_3 Small GTP-binding protein K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000467 276.0
PJD3_k127_508403_4 CheC-like family K03410 - - 0.000000000000000000000000000000000000000000000000000000001092 207.0
PJD3_k127_508403_5 P2 response regulator binding domain K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000002265 186.0
PJD3_k127_508403_6 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000004374 145.0
PJD3_k127_508403_7 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000002717 115.0
PJD3_k127_508403_8 PFAM Roadblock LC7 family protein - - - 0.00000004064 62.0
PJD3_k127_508403_9 Tetratricopeptide repeat - - - 0.000006772 52.0
PJD3_k127_510856_0 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 301.0
PJD3_k127_510856_1 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000003103 191.0
PJD3_k127_510856_2 peptidase - - - 0.000000000000000000003422 105.0
PJD3_k127_510856_3 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000008461 91.0
PJD3_k127_510856_5 - - - - 0.0005536 46.0
PJD3_k127_5114328_0 - - - - 0.000008319 57.0
PJD3_k127_5118479_0 DNA-templated transcription, initiation K03088 - - 0.0000000000000000001292 96.0
PJD3_k127_513096_0 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009906 474.0
PJD3_k127_513096_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001614 286.0
PJD3_k127_513096_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001442 258.0
PJD3_k127_513096_3 arylsulfatase A - - - 0.000000000000000000000000000000000000000000000000000000000000000000002818 254.0
PJD3_k127_5134293_0 protein kinase activity - - - 0.00000000000000000001768 93.0
PJD3_k127_5134293_1 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000001933 93.0
PJD3_k127_5156646_0 TrkA-C domain K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007807 515.0
PJD3_k127_5156646_1 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009485 422.0
PJD3_k127_5156646_2 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002778 278.0
PJD3_k127_5188695_0 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000934 466.0
PJD3_k127_5188695_1 Fatty acid desaturase K00508 - 1.14.19.3 0.000000000000000000000000000000000000000000000001129 186.0
PJD3_k127_5192115_0 PFAM NAD-dependent epimerase dehydratase - - - 2.066e-208 659.0
PJD3_k127_5192115_1 DNA photolyase K01669 - 4.1.99.3 9.798e-197 625.0
PJD3_k127_5192115_2 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006389 300.0
PJD3_k127_5192115_4 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852,K00874,K16328 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050225 2.7.1.15,2.7.1.45,2.7.1.83 0.00000000000000000000000000000000000000000000000001896 191.0
PJD3_k127_5192115_5 Activator of hsp90 atpase 1 family protein - - - 0.0000000000000000000000001064 111.0
PJD3_k127_5192115_6 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.0000000000000000000000009152 110.0
PJD3_k127_5192115_7 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000003746 94.0
PJD3_k127_5192115_8 - - - - 0.0000001818 61.0
PJD3_k127_5211387_0 RDD family K06384 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005985 351.0
PJD3_k127_5211387_1 associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 326.0
PJD3_k127_5211387_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000001272 107.0
PJD3_k127_5211387_4 pathogenesis - - - 0.000000000000000000008059 102.0
PJD3_k127_5211387_5 Protein of unknown function DUF58 - - - 0.000000000002284 76.0
PJD3_k127_5211387_6 Domain of unknown function (DUF4129) - - - 0.00001053 55.0
PJD3_k127_5226356_0 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008682 385.0
PJD3_k127_5226356_1 mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000000000000007068 222.0
PJD3_k127_5226356_2 Bacterial PH domain - - - 0.00000001176 66.0
PJD3_k127_5238829_0 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00819,K00821 GO:0003674,GO:0003824,GO:0004587,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.6.1.11,2.6.1.13,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003095 497.0
PJD3_k127_5238829_1 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000005194 202.0
PJD3_k127_524965_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 537.0
PJD3_k127_524965_1 Zinc finger domain - - - 0.000003141 53.0
PJD3_k127_5260495_0 Elongation factor G C-terminus K06207 - - 1.06e-275 878.0
PJD3_k127_5260495_1 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 356.0
PJD3_k127_5260495_2 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 310.0
PJD3_k127_5260495_3 SurA N-terminal domain K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001037 295.0
PJD3_k127_5260495_4 NAD(P)-binding Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001596 273.0
PJD3_k127_5260495_5 cation diffusion facilitator family transporter K16264 GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000000004455 256.0
PJD3_k127_5260495_6 - - - - 0.000006308 52.0
PJD3_k127_5306620_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001012 263.0
PJD3_k127_5306620_1 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000008248 75.0
PJD3_k127_5328810_0 succinate-CoA ligase activity - - - 0.00000000000001386 74.0
PJD3_k127_5333427_0 Peptidase family M28 - - - 2.685e-218 690.0
PJD3_k127_5333427_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 616.0
PJD3_k127_5333427_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000001285 225.0
PJD3_k127_5333427_3 COG4771 Outer membrane receptor for ferrienterochelin and colicins K02014,K16087,K16089 - - 0.0000000000000000000000000004005 126.0
PJD3_k127_5333427_4 lipopolysaccharide heptosyltransferase K02841,K02843 - - 0.00000000112 68.0
PJD3_k127_5341029_0 2-hydroxyglutaryl-CoA dehydratase, D-component K04113 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 406.0
PJD3_k127_5341029_1 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 381.0
PJD3_k127_5341029_2 Peptidase m28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 372.0
PJD3_k127_5341029_3 S-(hydroxymethyl)glutathione dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008404 352.0
PJD3_k127_5341029_4 BadF/BadG/BcrA/BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007495 326.0
PJD3_k127_5341029_5 PFAM ATPase, BadF BadG BcrA BcrD type - - - 0.0000000000000000000000000000000000000000000000000000002564 222.0
PJD3_k127_5341029_6 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000001884 160.0
PJD3_k127_5341029_7 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000007042 164.0
PJD3_k127_5341029_8 - - - - 0.00001996 51.0
PJD3_k127_5341029_9 hemerythrin HHE cation binding domain - - - 0.0002475 49.0
PJD3_k127_5346510_0 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 290.0
PJD3_k127_5346510_1 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000007161 179.0
PJD3_k127_5346510_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000695 168.0
PJD3_k127_5346510_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000008742 142.0
PJD3_k127_5350191_0 Enoyl-CoA hydratase K07539,K18570 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016822,GO:0016823,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901787,GO:1901788 3.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004228 427.0
PJD3_k127_5350191_1 M61 glycyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000008748 249.0
PJD3_k127_5350191_2 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000004918 238.0
PJD3_k127_5350191_3 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000003573 136.0
PJD3_k127_5350191_4 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) K00216 - 1.3.1.28 0.00000001073 60.0
PJD3_k127_5369540_0 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004598 521.0
PJD3_k127_5369540_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 398.0
PJD3_k127_5369540_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000001162 183.0
PJD3_k127_5369540_3 Phosphoribosyl transferase domain K07101 - - 0.00000000000000000000000000000000000000000000000456 177.0
PJD3_k127_5369540_4 anaphase-promoting complex binding - - - 0.00001428 57.0
PJD3_k127_5377435_0 RadC-like JAB domain K03630 - - 0.0000000000000000000000000000000000000000000000000003309 192.0
PJD3_k127_5382531_0 Flavin reductase like domain - - - 0.00000000000000000000000000000551 125.0
PJD3_k127_5382531_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000007666 115.0
PJD3_k127_5382531_2 G5 domain protein - - - 0.00000000000000007842 80.0
PJD3_k127_5388786_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005832 287.0
PJD3_k127_5390588_0 secondary active sulfate transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000002149 238.0
PJD3_k127_5390588_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000004453 219.0
PJD3_k127_5390588_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000008329 194.0
PJD3_k127_5390588_3 regulation of cell shape K04074,K06997 - - 0.0000000008418 67.0
PJD3_k127_5398112_0 Membrane - - - 3.264e-198 626.0
PJD3_k127_5398112_1 Tetratricopeptide repeat K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000379 280.0
PJD3_k127_5398112_2 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000134 226.0
PJD3_k127_5398112_3 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000000000000000000000004689 203.0
PJD3_k127_5398112_4 ECF sigma factor - - - 0.000000000000000000000000000000000000000003864 162.0
PJD3_k127_5398112_5 cytochrome C peroxidase - - - 0.00000000000000000000000000005377 129.0
PJD3_k127_5409554_0 Pyridoxal-phosphate dependent enzyme K05396 - 4.4.1.15 0.000000000000000004197 86.0
PJD3_k127_5409554_1 Pyridoxal-phosphate dependent enzyme K05396,K17950 - 4.4.1.15,4.4.1.25 0.000000000001548 70.0
PJD3_k127_5409554_2 Pyridoxal-phosphate dependent enzyme K01505 - 3.5.99.7 0.0000000001311 66.0
PJD3_k127_5409554_3 Pyridoxal-phosphate dependent enzyme K01505 - 3.5.99.7 0.00000002205 63.0
PJD3_k127_5409554_4 extracellular nuclease K07004 - - 0.000005071 50.0
PJD3_k127_5409554_5 Pyridoxal-phosphate dependent enzyme - - - 0.0005102 43.0
PJD3_k127_5416267_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000004779 218.0
PJD3_k127_5426186_0 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 303.0
PJD3_k127_5426186_1 Integrase core domain - - - 0.000000008282 57.0
PJD3_k127_5432986_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000003038 216.0
PJD3_k127_5432986_1 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000005141 97.0
PJD3_k127_5433065_0 HELICc2 K03722 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008101 408.0
PJD3_k127_5435823_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000003263 229.0
PJD3_k127_5435823_1 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000006186 104.0
PJD3_k127_5438342_0 Alpha galactosidase A - - - 0.000000000000000000000000000000000001886 148.0
PJD3_k127_5446779_0 PFAM Integrase catalytic region K07497 - - 0.0000000000000000000000000000000000000000000000685 179.0
PJD3_k127_5446779_1 PFAM transposase IS3 IS911 family protein K07497 - - 0.00000000000000000000000001032 110.0
PJD3_k127_5446779_2 Belongs to the peptidase S8 family - - - 0.000000164 63.0
PJD3_k127_5446779_3 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0001406 54.0
PJD3_k127_5466147_0 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008569 588.0
PJD3_k127_5466147_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000003566 213.0
PJD3_k127_5466147_2 - - - - 0.00000000000000000000000000000000000000000000004919 181.0
PJD3_k127_5475576_0 PFAM MazG nucleotide pyrophosphohydrolase K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000002324 234.0
PJD3_k127_5484211_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000001417 236.0
PJD3_k127_5484211_1 Bacterial type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000004525 232.0
PJD3_k127_548431_0 Transposase mutator type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006494 312.0
PJD3_k127_5490979_0 Alanine dehydrogenase/PNT, N-terminal domain K00290,K14157 - 1.5.1.7,1.5.1.8,1.5.1.9 0.00000000000000000000000000000000000001881 146.0
PJD3_k127_5495536_0 - - GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008757,GO:0016278,GO:0016740,GO:0016741,GO:0032259 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 314.0
PJD3_k127_5495536_1 Predicted permease YjgP/YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000003733 218.0
PJD3_k127_5511814_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004823 456.0
PJD3_k127_5511814_1 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000000000000000000000002625 232.0
PJD3_k127_5511814_2 Protein of unknown function (DUF520) K09767 - - 0.00000000000000000000000000000000000000000000000002032 184.0
PJD3_k127_5511814_3 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000002726 174.0
PJD3_k127_5511814_4 Homoserine dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000001786 172.0
PJD3_k127_5511814_5 - - - - 0.000000000000002215 82.0
PJD3_k127_5512866_0 Aldo Keto reductase K07079 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 325.0
PJD3_k127_5515338_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000001082 161.0
PJD3_k127_5515338_1 5-formyltetrahydrofolate cyclo-ligase K01934 - 6.3.3.2 0.00008968 50.0
PJD3_k127_552512_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.164e-248 773.0
PJD3_k127_552512_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009577 335.0
PJD3_k127_552512_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 324.0
PJD3_k127_552512_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000001196 98.0
PJD3_k127_5532759_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 542.0
PJD3_k127_5532759_1 Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006953 247.0
PJD3_k127_5532759_2 CcmB protein K02194 - - 0.0000000000000000000000000000000000000000000000000000009906 201.0
PJD3_k127_5532759_3 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.0000000000000000000000000000000000000000000000000005059 191.0
PJD3_k127_5532759_4 ABC transporter K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000004232 191.0
PJD3_k127_5532759_5 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000001946 172.0
PJD3_k127_5532759_6 STAS domain K04749 - - 0.0000002819 55.0
PJD3_k127_5533978_0 3-methyl-2-oxobutanoate hydroxymethyltransferase activity K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000696 329.0
PJD3_k127_5533978_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001445 295.0
PJD3_k127_5533978_2 HD superfamily hydrolase involved in NAD metabolism K00950 - 2.7.6.3 0.000000000000000000000000000000004759 139.0
PJD3_k127_5533978_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000006427 112.0
PJD3_k127_5533978_4 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000003269 53.0
PJD3_k127_5572739_0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 8.474e-229 727.0
PJD3_k127_5572739_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 518.0
PJD3_k127_5572739_10 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000003941 132.0
PJD3_k127_5572739_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000001235 123.0
PJD3_k127_5572739_12 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.00000000000000000000000000005026 124.0
PJD3_k127_5572739_13 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000005161 116.0
PJD3_k127_5572739_14 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000004086 118.0
PJD3_k127_5572739_15 Uncharacterised protein family (UPF0182) K09118 - - 0.00000000000000000000000008336 125.0
PJD3_k127_5572739_16 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000001237 80.0
PJD3_k127_5572739_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000586 494.0
PJD3_k127_5572739_3 Phosphoglucomutase/phosphomannomutase, C-terminal domain K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 489.0
PJD3_k127_5572739_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008184 434.0
PJD3_k127_5572739_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 334.0
PJD3_k127_5572739_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 326.0
PJD3_k127_5572739_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004652 278.0
PJD3_k127_5572739_8 Amino acid kinase family K00926 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008804,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019546,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000002638 243.0
PJD3_k127_5572739_9 NDK K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000001259 198.0
PJD3_k127_5580949_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000002943 183.0
PJD3_k127_5580949_1 Protein of unknown function (DUF993) - - - 0.00000089 51.0
PJD3_k127_5583142_0 glutamate--cysteine ligase - - - 0.000000000000000000000000000000000000000000000003315 180.0
PJD3_k127_5585070_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000238 229.0
PJD3_k127_5585070_1 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0000000000000000000000000000000000000000000000000000001072 206.0
PJD3_k127_5585070_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000005742 103.0
PJD3_k127_5626652_0 - - - - 0.0000000000003107 81.0
PJD3_k127_5626652_1 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.000002195 59.0
PJD3_k127_5629799_0 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000606 554.0
PJD3_k127_5629799_1 PFAM LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000007834 192.0
PJD3_k127_5630217_0 transporter - - - 0.000000000000000000000000000000000000007459 154.0
PJD3_k127_5630217_1 divalent heavy-metal cations transporter - - - 0.0000000000000000000000000003519 125.0
PJD3_k127_5631557_0 Biotin carboxylase C-terminal domain K01941,K01961 - 6.3.4.14,6.3.4.6,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 485.0
PJD3_k127_5631557_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 421.0
PJD3_k127_5631557_10 Ribosomal protein S9/S16 K02996 - - 0.000000000000000000000000000000000000000000000000008215 183.0
PJD3_k127_5631557_11 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000004845 177.0
PJD3_k127_5631557_12 Biotin-requiring enzyme - - - 0.000000000000000000000000000000004132 136.0
PJD3_k127_5631557_13 zinc metalloprotease K11749 GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016021,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0043170,GO:0043856,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0045152,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:0140110,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.000000000000000005537 86.0
PJD3_k127_5631557_14 Protein of unknown function (DUF2723) - - - 0.0002384 53.0
PJD3_k127_5631557_2 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 339.0
PJD3_k127_5631557_3 Ribosomal protein S2 K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 338.0
PJD3_k127_5631557_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 318.0
PJD3_k127_5631557_5 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000869 298.0
PJD3_k127_5631557_6 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000003012 233.0
PJD3_k127_5631557_7 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000001736 238.0
PJD3_k127_5631557_8 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000002209 213.0
PJD3_k127_5631557_9 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000508 207.0
PJD3_k127_563625_0 Beta-lactamase superfamily domain K06136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 350.0
PJD3_k127_563625_1 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000000000001872 164.0
PJD3_k127_563625_2 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000005457 132.0
PJD3_k127_5636340_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.217e-238 745.0
PJD3_k127_5636340_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 6.062e-199 632.0
PJD3_k127_5636340_10 - - - - 0.0000000000000000000002547 106.0
PJD3_k127_5636340_11 Molybdopterin guanine dinucleotide synthesis protein B K03753 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000003965 94.0
PJD3_k127_5636340_12 - - - - 0.0000000000000000013 91.0
PJD3_k127_5636340_13 PFAM nitrogen-fixing NifU domain protein - - - 0.0000000000000092 77.0
PJD3_k127_5636340_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 397.0
PJD3_k127_5636340_3 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007201 311.0
PJD3_k127_5636340_4 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000003179 214.0
PJD3_k127_5636340_5 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000004847 174.0
PJD3_k127_5636340_6 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000001292 172.0
PJD3_k127_5636340_7 CoA binding domain K06929 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000004646 133.0
PJD3_k127_5636340_8 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000007912 131.0
PJD3_k127_5636340_9 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000006293 129.0
PJD3_k127_5659052_0 glutamate--cysteine ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 520.0
PJD3_k127_5662106_0 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000765 544.0
PJD3_k127_5662106_1 response to abiotic stimulus - - - 0.00000000000000000000000001482 117.0
PJD3_k127_5662106_2 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000005309 102.0
PJD3_k127_5662106_3 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000003788 97.0
PJD3_k127_5662106_4 Cytidine and deoxycytidylate deaminase zinc-binding region - - - 0.000000000002446 67.0
PJD3_k127_5669988_0 Protein of unknown function, DUF255 K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 596.0
PJD3_k127_5669988_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 356.0
PJD3_k127_5669988_10 - - - - 0.0000000000000000000004804 100.0
PJD3_k127_5669988_2 PLD-like domain K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 327.0
PJD3_k127_5669988_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007055 275.0
PJD3_k127_5669988_4 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000002698 265.0
PJD3_k127_5669988_5 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004483 248.0
PJD3_k127_5669988_6 Peptidase family M20/M25/M40 - - - 0.0000000000000000000000000000000000000000000000009588 186.0
PJD3_k127_5669988_7 Cobalt transport protein K16785 - - 0.00000000000000000000000000006622 126.0
PJD3_k127_5669988_8 GAF domain-containing protein K08968 - 1.8.4.14 0.000000000000000000000005406 108.0
PJD3_k127_5669988_9 phosphorelay sensor kinase activity K16923 - - 0.00000000000000000000005335 106.0
PJD3_k127_5672466_0 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000007374 117.0
PJD3_k127_5725458_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 1.607e-223 705.0
PJD3_k127_5725458_1 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 551.0
PJD3_k127_5725458_10 Ham1 family K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000005197 191.0
PJD3_k127_5725458_11 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000001656 153.0
PJD3_k127_5725458_12 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.0000000000000000000000000000000000000004763 170.0
PJD3_k127_5725458_13 Lipopolysaccharide-assembly - - - 0.000000000000000000000000000000000000002898 152.0
PJD3_k127_5725458_14 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.00000000000000000000000000000000001984 147.0
PJD3_k127_5725458_15 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000001397 122.0
PJD3_k127_5725458_16 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000006976 96.0
PJD3_k127_5725458_17 - - - - 0.00000000000004967 81.0
PJD3_k127_5725458_18 - - - - 0.00001922 55.0
PJD3_k127_5725458_2 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009845 327.0
PJD3_k127_5725458_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005779 311.0
PJD3_k127_5725458_4 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 302.0
PJD3_k127_5725458_5 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 285.0
PJD3_k127_5725458_6 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001459 254.0
PJD3_k127_5725458_7 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000006657 228.0
PJD3_k127_5725458_8 SecD/SecF GG Motif K03074 - - 0.0000000000000000000000000000000000000000000000000000000000001716 226.0
PJD3_k127_5725458_9 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000000000001505 198.0
PJD3_k127_5725557_0 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005226 254.0
PJD3_k127_5725557_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0004005 46.0
PJD3_k127_5732637_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 307.0
PJD3_k127_5732637_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000000000000000000000000004811 154.0
PJD3_k127_5744223_0 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000001152 220.0
PJD3_k127_5744223_1 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000001415 209.0
PJD3_k127_5744223_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000008014 113.0
PJD3_k127_5744223_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000002375 81.0
PJD3_k127_5746848_0 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000276 211.0
PJD3_k127_5746848_1 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000145 103.0
PJD3_k127_5752681_0 Peptidase family C69 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000142 253.0
PJD3_k127_5752681_1 Peptidase family C69 - - - 0.00000000000000000000000000000000005177 135.0
PJD3_k127_5760425_0 COG0433 Predicted ATPase K06915 - - 1.179e-238 751.0
PJD3_k127_5760425_1 AAA domain K03546 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007284 550.0
PJD3_k127_5760425_2 Calcineurin-like phosphoesterase superfamily domain K03547 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 372.0
PJD3_k127_5765384_0 Putative lumazine-binding - - - 0.000000000000000000000000000000278 128.0
PJD3_k127_5765384_1 Membrane - - - 0.000000000000002292 82.0
PJD3_k127_5765384_2 4 iron, 4 sulfur cluster binding K02572,K02573 - - 0.000002515 53.0
PJD3_k127_5777254_0 aconitate hydratase K01681 - 4.2.1.3 1.944e-316 984.0
PJD3_k127_5777254_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 322.0
PJD3_k127_579826_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 368.0
PJD3_k127_579826_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005443 284.0
PJD3_k127_579826_2 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000001606 249.0
PJD3_k127_579826_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000001257 193.0
PJD3_k127_579826_4 Glutathione peroxidase - - - 0.0000000000000000000000000000000000000000006797 163.0
PJD3_k127_579826_5 PFAM Protein kinase domain K12132 - 2.7.11.1 0.00000000000004609 82.0
PJD3_k127_5799622_0 Peptidase family M50 - - - 0.00000000000000000000000000000004593 131.0
PJD3_k127_5799622_1 - - - - 0.00000000002473 69.0
PJD3_k127_5804663_0 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.00000000000000000000000000000000000000004116 157.0
PJD3_k127_5804663_1 helix_turn _helix lactose operon repressor K02529 - - 0.000000000000000000000000000000000002477 146.0
PJD3_k127_5804663_2 - - - - 0.0002788 53.0
PJD3_k127_5805602_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 511.0
PJD3_k127_5809840_0 PglZ domain - - - 1.921e-196 629.0
PJD3_k127_5809840_1 ABC transporter transmembrane region K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008158 452.0
PJD3_k127_5809840_2 Glycosyl transferase, family 9 K02843 - - 0.000000000000000000000000000000000000000000000001301 187.0
PJD3_k127_5809840_3 DUF based on E. rectale Gene description (DUF3880) K06320 - - 0.000000000000104 82.0
PJD3_k127_5817652_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 473.0
PJD3_k127_5817652_1 Penicillin binding protein transpeptidase domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000927 405.0
PJD3_k127_5817652_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 293.0
PJD3_k127_5817652_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000001163 193.0
PJD3_k127_5817652_4 TPR repeat-containing protein - - - 0.0000321 57.0
PJD3_k127_5817652_5 - - - - 0.00003692 49.0
PJD3_k127_582914_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005211 389.0
PJD3_k127_582914_1 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.00000000000000000000000000000000000000000000000000000000000000004884 229.0
PJD3_k127_582914_2 - K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.0000000000000000000001754 101.0
PJD3_k127_582914_3 iron dependent repressor K03709 - - 0.0000000000000007121 82.0
PJD3_k127_5829596_0 - - - - 0.0000000000000000001402 98.0
PJD3_k127_5829596_1 chlorophyll binding K02040,K03286,K21218 - - 0.0000005349 59.0
PJD3_k127_5830193_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000002705 200.0
PJD3_k127_5838499_0 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 434.0
PJD3_k127_5838499_1 Ethanolamine utilisation protein EutN/carboxysome K04028 - - 0.000000000000000000000000000000000000004873 149.0
PJD3_k127_5838499_2 BMC - - - 0.00000000000000000000000000001132 120.0
PJD3_k127_5841884_0 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000004951 227.0
PJD3_k127_5861094_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 458.0
PJD3_k127_5861094_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000009647 166.0
PJD3_k127_5861094_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639,K20967 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0040007,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0071944,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22,4.6.1.17 0.0000000000000000000004606 97.0
PJD3_k127_5876513_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 329.0
PJD3_k127_5876513_1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 288.0
PJD3_k127_5920759_0 PFAM Amino acid - - - 4.526e-273 901.0
PJD3_k127_5920759_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 6.504e-212 664.0
PJD3_k127_5920759_10 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.0000000000000000000000000000000000000399 158.0
PJD3_k127_5920759_11 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000002579 157.0
PJD3_k127_5920759_12 - - - - 0.00000000000000000000706 103.0
PJD3_k127_5920759_13 Mechanosensitive ion channel - - - 0.00000000000001045 85.0
PJD3_k127_5920759_14 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000001326 84.0
PJD3_k127_5920759_2 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007692 468.0
PJD3_k127_5920759_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 382.0
PJD3_k127_5920759_4 O-acyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 348.0
PJD3_k127_5920759_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006534 348.0
PJD3_k127_5920759_6 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000607 280.0
PJD3_k127_5920759_7 Periplasmic copper-binding protein (NosD) - - - 0.00000000000000000000000000000000000000000000000000000003437 216.0
PJD3_k127_5920759_8 PFAM Sodium calcium exchanger membrane region K07301 - - 0.00000000000000000000000000000000000000000000000004106 186.0
PJD3_k127_5920759_9 NUDIX domain K08310 - 3.6.1.67 0.000000000000000000000000000000000000007806 152.0
PJD3_k127_5923496_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 564.0
PJD3_k127_5923496_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 400.0
PJD3_k127_5923496_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003744 386.0
PJD3_k127_5923496_3 Cell cycle protein K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 331.0
PJD3_k127_5923496_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 289.0
PJD3_k127_5923496_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000149 296.0
PJD3_k127_5923496_6 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000005954 202.0
PJD3_k127_5923496_7 Cell division protein FtsQ K03589 - - 0.0000000000000000000000000003642 123.0
PJD3_k127_5924293_0 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000000000003709 228.0
PJD3_k127_5924293_1 aldehyde oxidase and xanthine dehydrogenase a b hammerhead - - - 0.0000000000000000000000177 104.0
PJD3_k127_5932409_0 Alpha galactosidase A K07407 - 3.2.1.22 0.000000000000000001416 94.0
PJD3_k127_5938144_0 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 484.0
PJD3_k127_5938144_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 395.0
PJD3_k127_5938144_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006203 373.0
PJD3_k127_5938144_3 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 329.0
PJD3_k127_5938144_4 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000007498 222.0
PJD3_k127_5938144_5 Protein of unknown function (DUF1684) K09164 - - 0.000000000000004789 85.0
PJD3_k127_5938144_6 Protein of unknown function (DUF3108) - - - 0.000007923 49.0
PJD3_k127_5938144_7 - - - - 0.0003415 46.0
PJD3_k127_5952964_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 5.347e-219 692.0
PJD3_k127_5952964_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 454.0
PJD3_k127_5952964_2 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 311.0
PJD3_k127_5952964_3 Peptidase, M23 - - - 0.00000000009083 64.0
PJD3_k127_5952964_4 Zinc-dependent metalloprotease - - - 0.0002577 53.0
PJD3_k127_5953403_0 response regulator K07782 - - 0.0000000000000000000000000000000000000000000000000000000000000004256 228.0
PJD3_k127_5953403_1 - - - - 0.00000000000001973 82.0
PJD3_k127_5971616_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000002592 226.0
PJD3_k127_599480_0 Saccharopine dehydrogenase C-terminal domain K19064 - 1.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 492.0
PJD3_k127_599480_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 458.0
PJD3_k127_599480_2 Asparaginase K01444 - 3.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000699 391.0
PJD3_k127_599480_3 Thioredoxin - - - 0.00000000000000000000000000000000000000009587 157.0
PJD3_k127_599480_4 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides K08281 - 3.5.1.19 0.00000000002586 66.0
PJD3_k127_599480_5 Calcineurin-like phosphoesterase - - - 0.0000002378 63.0
PJD3_k127_599480_6 Tricorn protease C1 domain - - - 0.00003266 55.0
PJD3_k127_5997549_0 lysine biosynthetic process via aminoadipic acid - - - 1.054e-219 702.0
PJD3_k127_6009503_0 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808 484.0
PJD3_k127_6009503_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 317.0
PJD3_k127_6009503_2 cyclic nucleotide binding K00384,K10914,K16922 - 1.8.1.9 0.0003248 47.0
PJD3_k127_6057515_0 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000001236 133.0
PJD3_k127_6057515_1 - - - - 0.0000000000000000003118 89.0
PJD3_k127_6057515_2 Thioesterase superfamily - - - 0.000000000000000002264 91.0
PJD3_k127_6070054_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 478.0
PJD3_k127_6070054_1 Type IV pilus assembly protein PilM; K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 458.0
PJD3_k127_6070054_10 protein transport across the cell outer membrane K02457,K02458,K08084 - - 0.00002134 52.0
PJD3_k127_6070054_2 AMIN domain K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 467.0
PJD3_k127_6070054_3 Bacterial regulatory protein, Fis family K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001952 279.0
PJD3_k127_6070054_4 - - - - 0.00000000000000000000000000000000000223 153.0
PJD3_k127_6070054_5 Fimbrial assembly protein (PilN) - - - 0.0000000000000000000000000000000005027 139.0
PJD3_k127_6070054_6 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000878 134.0
PJD3_k127_6070054_7 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000000002346 119.0
PJD3_k127_6070054_8 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000009076 106.0
PJD3_k127_6070054_9 - - - - 0.000000000000000000006195 100.0
PJD3_k127_6073064_0 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 2.44e-238 749.0
PJD3_k127_6073064_1 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 2.246e-214 672.0
PJD3_k127_6073064_10 cyclic nucleotide-binding K10914 - - 0.0002405 54.0
PJD3_k127_6073064_2 DinB superfamily K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005612 466.0
PJD3_k127_6073064_3 PFAM Sodium sulfate symporter transmembrane region K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 381.0
PJD3_k127_6073064_4 transport K05845,K05846 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 362.0
PJD3_k127_6073064_5 Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine K18911 - 2.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002429 284.0
PJD3_k127_6073064_6 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006987 276.0
PJD3_k127_6073064_7 glycine betaine L-proline K05847 - - 0.0000000000000000000000000000000000000000000000000000000000000000006177 237.0
PJD3_k127_6073064_8 Glutamate-cysteine ligase family 2(GCS2) K01919 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000001404 212.0
PJD3_k127_6073064_9 phosphorelay signal transduction system K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000003134 218.0
PJD3_k127_6077295_0 GHMP kinases N terminal domain K00938 - 2.7.4.2 0.000000004329 68.0
PJD3_k127_6106228_0 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000001839 122.0
PJD3_k127_6128603_1 Lipocalin-like domain - - - 0.0000000000281 72.0
PJD3_k127_6132703_0 4 iron, 4 sulfur cluster binding K03737 - 1.2.7.1 0.0 1434.0
PJD3_k127_6132703_1 electron transfer activity K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 318.0
PJD3_k127_6148548_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 515.0
PJD3_k127_6148548_1 Elongator protein 3, MiaB family, Radical SAM K18285 - 2.5.1.120 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 505.0
PJD3_k127_6148548_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 494.0
PJD3_k127_6148548_3 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007241 322.0
PJD3_k127_6148548_4 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001265 288.0
PJD3_k127_6148548_5 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000002693 191.0
PJD3_k127_6148548_6 SNARE associated Golgi protein - - - 0.00000000000000000000000000001879 129.0
PJD3_k127_6148548_7 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000002434 118.0
PJD3_k127_6148548_8 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000103 113.0
PJD3_k127_6174250_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 8.528e-291 914.0
PJD3_k127_6174250_1 Peptidase family M1 domain - - - 3.922e-260 816.0
PJD3_k127_6174250_10 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000009171 229.0
PJD3_k127_6174250_11 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000008101 205.0
PJD3_k127_6174250_12 transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000002006 211.0
PJD3_k127_6174250_13 Tfp pilus assembly protein FimV K00694 - 2.4.1.12 0.0000000000000000000000000000000000000000000127 179.0
PJD3_k127_6174250_14 COG0346 Lactoylglutathione lyase and related lyases - - - 0.00000000000000000000000000000000000000000002861 168.0
PJD3_k127_6174250_15 Protein of unknown function (DUF962) - - - 0.00000000000000000000000000000000000000000007361 161.0
PJD3_k127_6174250_16 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000005713 147.0
PJD3_k127_6174250_17 Metal-sensitive transcriptional repressor K21600 - - 0.000000000000000000000000000000000002065 141.0
PJD3_k127_6174250_18 - - - - 0.00000000000000000000000000000001029 134.0
PJD3_k127_6174250_19 Cupredoxin-like domain - - - 0.0000000000000000000000000000001828 132.0
PJD3_k127_6174250_2 Heavy-metal-associated domain K01533,K17686 - 3.6.3.4,3.6.3.54 3.403e-248 792.0
PJD3_k127_6174250_20 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.0000000000000000000000000000002124 127.0
PJD3_k127_6174250_21 SnoaL-like domain - - - 0.000000000000000000000000000004377 125.0
PJD3_k127_6174250_22 AraC-like ligand binding domain - - - 0.000000000000000000000000000007953 123.0
PJD3_k127_6174250_23 Antidote-toxin recognition MazE, bacterial antitoxin K07172 - - 0.00000000000000000003317 92.0
PJD3_k127_6174250_24 Heavy-metal-associated domain K07213 - - 0.000000000001378 72.0
PJD3_k127_6174250_3 HI0933-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 580.0
PJD3_k127_6174250_4 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008631 464.0
PJD3_k127_6174250_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 338.0
PJD3_k127_6174250_6 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009085 306.0
PJD3_k127_6174250_7 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 299.0
PJD3_k127_6174250_8 Amidinotransferase K01482 - 3.5.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009389 279.0
PJD3_k127_6174250_9 ABC 3 transport family K02075,K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001018 254.0
PJD3_k127_6188490_0 Penicillin amidase K07116 - 3.5.1.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007973 489.0
PJD3_k127_6188490_1 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001337 264.0
PJD3_k127_6188490_2 Protein of unknown function (DUF429) K09147 - - 0.000000000000000000000000000000000000000000000000000000000000008182 225.0
PJD3_k127_6188490_3 - - - - 0.000000000000000000000000000000000000000002607 162.0
PJD3_k127_6188490_4 CoA binding domain K06929 - - 0.00000000000000000000000000000000000000002642 157.0
PJD3_k127_6188490_5 - - - - 0.00000000000000000000000000000000005736 139.0
PJD3_k127_6188490_6 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000002105 136.0
PJD3_k127_6188490_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000005079 128.0
PJD3_k127_6188490_8 Cysteine-rich CPXCG - - - 0.0000000000000000005242 89.0
PJD3_k127_6200100_0 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009507 606.0
PJD3_k127_6200100_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 369.0
PJD3_k127_6200100_2 Belongs to the multicopper oxidase YfiH RL5 family K05810 GO:0003674,GO:0005488,GO:0005507,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.000000000000000000000001121 115.0
PJD3_k127_6200100_3 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000002621 105.0
PJD3_k127_6201747_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 473.0
PJD3_k127_6201747_1 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 374.0
PJD3_k127_6201747_10 N-Acetylmuramoyl-L-alanine amidase - - - 0.00000000001327 76.0
PJD3_k127_6201747_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006067 250.0
PJD3_k127_6201747_3 Roadblock/LC7 domain - - - 0.0000000000000000000000000000000000000000000000000007375 193.0
PJD3_k127_6201747_4 pilus organization - - - 0.0000000000000000000000000000000000000000000002166 184.0
PJD3_k127_6201747_5 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000002368 117.0
PJD3_k127_6201747_8 - - - - 0.00000000000000007069 87.0
PJD3_k127_6201747_9 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000001212 78.0
PJD3_k127_6207910_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 3.211e-199 642.0
PJD3_k127_6207910_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008001 581.0
PJD3_k127_6207910_2 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 345.0
PJD3_k127_6228682_0 heme-copper terminal oxidase activity K02274 - 1.9.3.1 1.48e-197 630.0
PJD3_k127_6228682_1 CobW/HypB/UreG, nucleotide-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006686 605.0
PJD3_k127_6228682_2 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005483 266.0
PJD3_k127_6228682_3 cytochrome c oxidase (Subunit II) - - - 0.000000000000000000000000000000000000000000000000000000003168 206.0
PJD3_k127_6228682_4 serine-type endopeptidase activity - - - 0.00000000000000000000000001686 123.0
PJD3_k127_6228682_5 2 iron, 2 sulfur cluster binding K13643 - - 0.00000000000000000000001375 108.0
PJD3_k127_6228682_6 NmrA-like family - - - 0.00000000000000000000003254 103.0
PJD3_k127_6228682_7 Electron transport protein SCO1 SenC K07152 - - 0.00000000000004688 82.0
PJD3_k127_6228682_8 - - - - 0.000000000009138 73.0
PJD3_k127_6228682_9 - - - - 0.000005002 50.0
PJD3_k127_6233029_0 Peptidase, family M49 - - - 0.000000000000000000000000000000000000000000000001159 186.0
PJD3_k127_6237926_0 CotH kinase protein - - - 0.000000000000000000000000000000000000000000000000002306 199.0
PJD3_k127_6237926_1 CotH kinase protein - - - 0.0004623 52.0
PJD3_k127_624079_0 TAP-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000004058 236.0
PJD3_k127_624505_0 SIS domain K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 372.0
PJD3_k127_624505_1 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000002433 179.0
PJD3_k127_624505_2 - - - - 0.000000000000000000000000000000000000000000000007232 189.0
PJD3_k127_624505_3 DAHP synthetase I family K01627 - 2.5.1.55 0.0000000000000000000000000001372 117.0
PJD3_k127_624505_4 Lipopolysaccharide-assembly, LptC-related - - - 0.00000000000000000004939 99.0
PJD3_k127_6256789_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 424.0
PJD3_k127_6256789_1 ATP synthesis coupled electron transport K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000004341 178.0
PJD3_k127_6267223_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 0.0 1046.0
PJD3_k127_6267223_1 Fumarate reductase, iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005823 389.0
PJD3_k127_6280215_0 Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001415 259.0
PJD3_k127_6287315_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000809 357.0
PJD3_k127_6295711_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 2.679e-217 689.0
PJD3_k127_6295711_1 acr, cog1993 K09137 - - 0.0000000000000000000000000000000000000000000003501 171.0
PJD3_k127_6295711_2 Thioesterase superfamily - - - 0.00000000000000000000000000000000000003215 150.0
PJD3_k127_6295711_3 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000000003369 130.0
PJD3_k127_6296938_0 Putative aminopeptidase - - - 0.0000000000000000000000000000000000000000339 164.0
PJD3_k127_6296938_1 domain, Protein K01179,K07260,K13735 - 3.2.1.4,3.4.17.14 0.00000000000000000000000000000000001897 145.0
PJD3_k127_6296938_2 long-chain fatty acid transport protein - - - 0.000008924 57.0
PJD3_k127_6297855_0 5'-nucleotidase, C-terminal domain K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 602.0
PJD3_k127_6297855_1 Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007346 417.0
PJD3_k127_6297855_10 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000004095 134.0
PJD3_k127_6297855_11 Protein of unknown function (DUF445) - - - 0.0000000000005895 79.0
PJD3_k127_6297855_12 DNA-binding transcription factor activity K03892 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0043170,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0046685,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000003614 63.0
PJD3_k127_6297855_13 - - - - 0.00000003698 66.0
PJD3_k127_6297855_14 Pfam Phosphate-selective porin O and P - - - 0.000000257 62.0
PJD3_k127_6297855_15 Belongs to the peptidase S1C family K08070 - 1.3.1.74 0.0007249 52.0
PJD3_k127_6297855_2 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 340.0
PJD3_k127_6297855_3 HAMP domain K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 328.0
PJD3_k127_6297855_4 Transcriptional regulatory protein, C terminal K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007272 300.0
PJD3_k127_6297855_5 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009024 315.0
PJD3_k127_6297855_6 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000004377 262.0
PJD3_k127_6297855_7 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000117 247.0
PJD3_k127_6297855_8 Zn peptidase - - - 0.00000000000000000000000000000000000000000000000000000002512 220.0
PJD3_k127_6297855_9 RNA 2'-O ribose methyltransferase substrate binding K03437 - - 0.0000000000000000000000000000000000000000000000000000002504 203.0
PJD3_k127_6303998_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1172.0
PJD3_k127_6303998_1 cobalamin-transporting ATPase activity K02014,K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 449.0
PJD3_k127_6303998_10 Cytochrome c - - - 0.0000000000000000000000001238 121.0
PJD3_k127_6303998_11 Carboxypeptidase - - - 0.0000000000000006165 85.0
PJD3_k127_6303998_12 amine dehydrogenase activity - - - 0.0000000000008185 80.0
PJD3_k127_6303998_13 Leishmanolysin - - - 0.000001308 57.0
PJD3_k127_6303998_14 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.000002114 51.0
PJD3_k127_6303998_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 413.0
PJD3_k127_6303998_3 Elongation factor SelB winged helix 3 K03833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005601 400.0
PJD3_k127_6303998_4 FecCD transport family K02013,K02015 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000001306 255.0
PJD3_k127_6303998_5 ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000005086 234.0
PJD3_k127_6303998_6 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000000001111 188.0
PJD3_k127_6303998_7 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.0000000000000000000000000000000000000000000000002771 183.0
PJD3_k127_6303998_8 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000009017 177.0
PJD3_k127_6303998_9 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000003798 153.0
PJD3_k127_6358668_0 Multicopper oxidase K00368,K22348 - 1.16.3.3,1.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000002151 277.0
PJD3_k127_6366682_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1186.0
PJD3_k127_6366682_1 COG0471 Di- and tricarboxylate transporters - - - 0.000000000000000000000000000000000000000000000653 167.0
PJD3_k127_6367969_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 556.0
PJD3_k127_6367969_1 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 489.0
PJD3_k127_6367969_2 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006504 350.0
PJD3_k127_6367969_3 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000248 201.0
PJD3_k127_6367969_4 maF-like protein K06287 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030145,GO:0036218,GO:0036221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0047429 - 0.000000000000000000000000000000000000000002924 162.0
PJD3_k127_6368912_0 MatE K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004204 261.0
PJD3_k127_6368912_1 response regulator, receiver - - - 0.0000000000000000000000000000007303 124.0
PJD3_k127_6368912_2 TM2 domain - - - 0.0000000000000000007736 92.0
PJD3_k127_6391923_0 serine-type peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 454.0
PJD3_k127_6391923_1 protoporphyrinogen oxidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 334.0
PJD3_k127_6391923_2 - - - - 0.0000000000000000000005025 99.0
PJD3_k127_6404689_0 COG0006 Xaa-Pro aminopeptidase K08688 - 3.5.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006193 448.0
PJD3_k127_6404689_1 - - - - 0.00000000000000000000269 98.0
PJD3_k127_6418070_0 Rossmann-like domain - - - 0.000000000000000000000000000000000000105 154.0
PJD3_k127_6418070_1 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000002764 122.0
PJD3_k127_6418070_2 tail specific protease K03797 - 3.4.21.102 0.000000000003411 72.0
PJD3_k127_6420285_0 Glycosyltransferase Family 4 - - - 0.0 1268.0
PJD3_k127_6420285_1 beta-1,4-mannooligosaccharide phosphorylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 535.0
PJD3_k127_6420285_2 permease - - - 0.000005492 49.0
PJD3_k127_6420306_0 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006042 548.0
PJD3_k127_6420306_1 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000009292 220.0
PJD3_k127_6420306_2 - - - - 0.00000000000000000000000000000000000000000000000002209 185.0
PJD3_k127_6420306_3 Domain of unknown function (DUF4184) - - - 0.000000000000000000000000000000002813 139.0
PJD3_k127_6420306_4 Multicopper oxidase K22348 - 1.16.3.3 0.00000000000000000000000203 108.0
PJD3_k127_6420306_5 - - - - 0.0000000000000001699 91.0
PJD3_k127_6420306_6 ubiE/COQ5 methyltransferase family - - - 0.000000000000001155 79.0
PJD3_k127_6420306_7 - - - - 0.0000000000588 68.0
PJD3_k127_6420306_8 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.000000001187 71.0
PJD3_k127_6420306_9 - - - - 0.000000001415 61.0
PJD3_k127_6423779_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 3.474e-228 730.0
PJD3_k127_6423779_1 Alcohol dehydrogenase GroES domain protein K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005881 480.0
PJD3_k127_6423779_2 Protein of unknown function (DUF819) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 454.0
PJD3_k127_6423779_3 Glutamate-cysteine ligase family 2(GCS2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 368.0
PJD3_k127_6423779_4 N-formylglutamate amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000001036 229.0
PJD3_k127_6423779_5 CO dehydrogenase flavoprotein C-terminal domain K13479 - 1.17.1.4 0.000000000000000000000000000000000000000001474 167.0
PJD3_k127_6423779_6 CO dehydrogenase flavoprotein K03518,K13481 - 1.17.1.4,1.2.5.3 0.000000000000000000000000000000000000009211 156.0
PJD3_k127_6423779_7 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000008802 120.0
PJD3_k127_6427375_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 - 4.1.1.98 1.71e-243 760.0
PJD3_k127_6427375_1 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 322.0
PJD3_k127_6427375_2 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000008307 259.0
PJD3_k127_6427375_3 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000004651 245.0
PJD3_k127_6427375_4 GIY-YIG type nucleases (URI domain) K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000408 245.0
PJD3_k127_6427375_5 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000005234 159.0
PJD3_k127_6431924_0 Glutamate formimidoyltransferase K00603,K13990 - 2.1.2.5,4.3.1.4 1.49e-226 714.0
PJD3_k127_6431924_1 Zincin-like metallopeptidase - - - 0.000000000000002651 84.0
PJD3_k127_643541_0 Sodium Bile acid symporter family K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004151 425.0
PJD3_k127_643541_1 Methyltransferase type 11 K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007825 324.0
PJD3_k127_643541_2 Phospholipid methyltransferase K21310 - 2.1.1.334 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 305.0
PJD3_k127_643541_3 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.000000000000000000000000000000000000000008401 169.0
PJD3_k127_643541_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000006194 109.0
PJD3_k127_643541_5 DinB family - - - 0.000000000000002086 83.0
PJD3_k127_643541_6 - - - - 0.00001059 53.0
PJD3_k127_6435840_0 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009667 374.0
PJD3_k127_6435840_1 Ribonuclease E/G family K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 385.0
PJD3_k127_6435840_10 - - - - 0.000008527 55.0
PJD3_k127_6435840_2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009763 299.0
PJD3_k127_6435840_3 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000001425 259.0
PJD3_k127_6435840_4 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.000000000000000000000000000000000000000000000000000000000002182 222.0
PJD3_k127_6435840_5 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000002871 198.0
PJD3_k127_6435840_6 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000002457 141.0
PJD3_k127_6435840_7 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000000000000000003537 122.0
PJD3_k127_6435840_8 Acyl-CoA dehydrogenase, C-terminal domain K18244 - - 0.00000000000000000000000000001088 118.0
PJD3_k127_6435840_9 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000001255 122.0
PJD3_k127_6443679_0 3-beta hydroxysteroid dehydrogenase/isomerase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000019 247.0
PJD3_k127_6443679_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000002958 194.0
PJD3_k127_6443679_2 Glycoprotease family K14742 - - 0.00000000000000000000000007822 117.0
PJD3_k127_6443679_3 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000004505 113.0
PJD3_k127_6443679_4 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000004253 95.0
PJD3_k127_6443679_5 peptidoglycan-binding protein, lysm - - - 0.00000000000000001067 95.0
PJD3_k127_6443679_6 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0002682,GO:0002684,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006950,GO:0008150,GO:0009314,GO:0009380,GO:0009605,GO:0009607,GO:0009628,GO:0016020,GO:0032991,GO:0035821,GO:0042802,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0071944,GO:0075136,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00004167 49.0
PJD3_k127_6445557_0 PFAM Cys Met metabolism pyridoxal-phosphate- dependent protein K01739,K01758,K01761 - 2.5.1.48,4.4.1.1,4.4.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009163 546.0
PJD3_k127_6452977_0 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00819,K00821 GO:0003674,GO:0003824,GO:0004587,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.6.1.11,2.6.1.13,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005839 535.0
PJD3_k127_6463286_0 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000003378 141.0
PJD3_k127_6466822_0 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 452.0
PJD3_k127_6466822_1 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.000000000000000000000000000000000000000000004513 166.0
PJD3_k127_6466822_2 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.0000000000000000000000000000000005598 139.0
PJD3_k127_6466822_3 Mo-molybdopterin cofactor metabolic process K03636,K21142 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.12 0.00009109 52.0
PJD3_k127_6472820_0 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000798 537.0
PJD3_k127_6472820_1 Glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0000000000000000000000000000000000000000000000004564 179.0
PJD3_k127_6481883_0 PFAM Prenyltransferase squalene oxidase K06045,K17811 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009267,GO:0009605,GO:0009607,GO:0009975,GO:0009987,GO:0009991,GO:0010350,GO:0016101,GO:0016102,GO:0016114,GO:0016853,GO:0016872,GO:0019637,GO:0031667,GO:0031668,GO:0031669,GO:0033385,GO:0033554,GO:0035439,GO:0035440,GO:0042594,GO:0043167,GO:0043169,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044419,GO:0046872,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071496,GO:0071704,GO:0075136,GO:1901576 4.2.1.129,5.4.99.17,5.5.1.16 0.00000000000000000000000000000000000000000000000000000000008644 218.0
PJD3_k127_6489881_0 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000002373 201.0
PJD3_k127_6489881_1 N-terminal domain of oxidoreductase K07119 - - 0.000000000000000000000001261 108.0
PJD3_k127_6489881_2 PFAM SOUL heme-binding protein - - - 0.0000000000000001045 81.0
PJD3_k127_6511027_0 Transposase DDE domain K07487 - - 2.792e-229 718.0
PJD3_k127_6538091_0 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005659 262.0
PJD3_k127_6538091_1 - - - - 0.00000006991 61.0
PJD3_k127_6538091_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00001242 49.0
PJD3_k127_6539927_0 - K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.000000000000000000000000000000000000000000000000000336 188.0
PJD3_k127_6539927_1 Multicopper oxidase K22348 - 1.16.3.3 0.000000000000000000000000000001577 125.0
PJD3_k127_6539927_2 spectrin binding K15503 - - 0.00000000001099 70.0
PJD3_k127_6550017_0 Fructose-bisphosphate aldolase class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 582.0
PJD3_k127_6550017_1 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 476.0
PJD3_k127_6550017_2 Phosphoglucose isomerase K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 416.0
PJD3_k127_6550017_3 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 301.0
PJD3_k127_6550017_4 YtxH-like protein - - - 0.000000002025 65.0
PJD3_k127_6550017_5 Virulence factor BrkB K07058 - - 0.000000004934 63.0
PJD3_k127_658455_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 3.515e-209 657.0
PJD3_k127_658455_1 Acyclic terpene utilisation family protein AtuA - - - 1.933e-201 636.0
PJD3_k127_658455_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 487.0
PJD3_k127_658455_3 COG1014 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, gamma subunit K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 332.0
PJD3_k127_658455_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000001611 226.0
PJD3_k127_658455_5 enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000001746 197.0
PJD3_k127_658455_6 - - - - 0.0000000000000000000000000000000000000000004701 160.0
PJD3_k127_663137_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 458.0
PJD3_k127_663137_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000004745 89.0
PJD3_k127_675491_0 protein conserved in bacteria - - - 0.0000000000000000000000000000000000002208 153.0
PJD3_k127_699028_0 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003298 270.0
PJD3_k127_699028_1 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000001807 156.0
PJD3_k127_699028_2 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000004594 136.0
PJD3_k127_699028_3 Transcriptional regulator K16137 - - 0.000000000000000000000000000000006809 135.0
PJD3_k127_699028_4 nuclear chromosome segregation - - - 0.000000000000000000000000000000007231 139.0
PJD3_k127_699028_5 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000006465 127.0
PJD3_k127_699028_6 - - - - 0.00000002468 57.0
PJD3_k127_710431_0 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs - - - 0.0000000000000000000000000000000000000000000000000000000000006405 215.0
PJD3_k127_710431_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily K03216 - 2.1.1.207 0.0000000000000000000000000000000000000009081 152.0
PJD3_k127_717311_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 331.0
PJD3_k127_717311_1 - - - - 0.00000000000000009694 92.0
PJD3_k127_718067_0 Aromatic amino acid lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005836 302.0
PJD3_k127_731621_0 Belongs to the glycosyl hydrolase 43 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 354.0
PJD3_k127_731621_1 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401 347.0
PJD3_k127_748221_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 350.0
PJD3_k127_748221_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000001284 241.0
PJD3_k127_748221_2 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000000000005015 220.0
PJD3_k127_748221_3 HEAT repeats - - - 0.0000000000000000000000000000000000000001015 155.0
PJD3_k127_748643_0 Belongs to the RtcB family K14415 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 6.5.1.3 0.000000000000000000000000000000000000000000000000000005277 194.0
PJD3_k127_754538_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 559.0
PJD3_k127_754538_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 422.0
PJD3_k127_754538_10 Ribosomal protein S16 K02959 - - 0.000000000000000000002156 102.0
PJD3_k127_754538_11 Protein of unknown function (DUF445) - - - 0.00000000000000152 86.0
PJD3_k127_754538_12 - - - - 0.000000000001691 73.0
PJD3_k127_754538_2 Lytic transglycosylase catalytic K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 298.0
PJD3_k127_754538_3 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002959 282.0
PJD3_k127_754538_4 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000006694 248.0
PJD3_k127_754538_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000009333 195.0
PJD3_k127_754538_6 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000001958 178.0
PJD3_k127_754538_7 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000233 153.0
PJD3_k127_754538_8 Transglycosylase SLT domain - - - 0.00000000000000000000000000000001141 135.0
PJD3_k127_754538_9 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0008150,GO:0040007 - 0.0000000000000000000000002679 115.0
PJD3_k127_758472_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000002663 226.0
PJD3_k127_758472_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000182 178.0
PJD3_k127_784234_0 Alpha-tubulin suppressor and related RCC1 domain-containing - - - 0.000000000000000000000000000000000000000000000000000000000000000000001516 253.0
PJD3_k127_784234_1 COGs COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.00000000000000000000000000000000000000000001851 166.0
PJD3_k127_784234_2 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000006462 148.0
PJD3_k127_792100_0 FeS assembly protein SufB K09014 - - 0.0000000000000000000000000000000000000000000000000000000000002221 215.0
PJD3_k127_792100_1 HTH domain - - - 0.000000000000000000000000000000000000004237 154.0
PJD3_k127_794598_0 Dihydrodipicolinate synthetase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004029 411.0
PJD3_k127_794598_1 Epimerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008951 341.0
PJD3_k127_794598_2 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 338.0
PJD3_k127_794598_3 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000224 138.0
PJD3_k127_797008_0 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 617.0
PJD3_k127_797008_1 Na+/H+ antiporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007501 587.0
PJD3_k127_797008_2 Predicted permease YjgP/YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 310.0
PJD3_k127_797008_3 amino acid activation for nonribosomal peptide biosynthetic process K05996 - 3.4.17.18 0.000000000000000000000000000000000000000002216 179.0
PJD3_k127_797008_4 Cytochrome oxidase assembly protein K02259 - - 0.000000000000000000000000000000000001723 149.0
PJD3_k127_797008_5 Predicted permease YjgP/YjgQ family K07091 - - 0.00000000000000000000000002977 117.0
PJD3_k127_797008_6 - K03641 - - 0.000000000000000000001084 109.0
PJD3_k127_797008_7 PFAM Uncharacterised protein family (UPF0164) - - - 0.000000000000000000004219 103.0
PJD3_k127_809481_0 lipoprotein transporter activity K02003,K09814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008323 332.0
PJD3_k127_809481_1 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000005684 204.0
PJD3_k127_813408_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000003271 239.0
PJD3_k127_813408_1 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000909 156.0
PJD3_k127_814547_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009196 438.0
PJD3_k127_814547_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001264 274.0
PJD3_k127_814547_2 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007155 265.0
PJD3_k127_814547_3 GHMP kinase - - - 0.000000000000000000000000000000000000000002578 167.0
PJD3_k127_814547_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.0001416 44.0
PJD3_k127_834517_0 - - GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008757,GO:0016278,GO:0016740,GO:0016741,GO:0032259 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007438 589.0
PJD3_k127_834517_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02504,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004953 367.0
PJD3_k127_834517_2 Peptidase M28 - - - 0.00000000000000000000000000000000000000000000000000000000001017 222.0
PJD3_k127_834517_3 TIGRFAM competence protein ComEA helix-hairpin-helix repeat K02237 - - 0.0000000000000005735 87.0
PJD3_k127_850859_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 2.511e-214 679.0
PJD3_k127_850859_1 - - - - 0.000000000000000000000000000007131 138.0
PJD3_k127_868061_0 amine dehydrogenase activity K17285 - - 8.523e-241 751.0
PJD3_k127_868061_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 555.0
PJD3_k127_868061_2 Aminotransferase class-III K00821,K03918,K07250,K13524,K20428 - 2.6.1.11,2.6.1.17,2.6.1.19,2.6.1.22,2.6.1.33,2.6.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 484.0
PJD3_k127_868061_3 COG0454 Histone acetyltransferase HPA2 and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 368.0
PJD3_k127_868061_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000001046 251.0
PJD3_k127_868061_5 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000002732 197.0
PJD3_k127_868061_6 COG0454 Histone acetyltransferase HPA2 and related - - - 0.000000000000000000000000000000000000000000000000000875 197.0
PJD3_k127_868061_7 - - - - 0.00000000000000000000000000000000000000000000000005169 189.0
PJD3_k127_868061_8 - - - - 0.0000000000000000000000000000493 121.0
PJD3_k127_868061_9 DinB superfamily - - - 0.0000002235 59.0
PJD3_k127_881119_0 Peptidase, M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004408 395.0
PJD3_k127_881119_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008375 327.0
PJD3_k127_881119_2 Heterodisulfide reductase, subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000001808 276.0
PJD3_k127_881119_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000001122 146.0
PJD3_k127_881119_4 Nitrous oxide-stimulated promoter - - - 0.000000000000000000000000000000363 129.0
PJD3_k127_881119_5 - - - - 0.0002886 50.0
PJD3_k127_881441_0 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000008768 154.0
PJD3_k127_904361_0 PFAM sugar isomerase (SIS) K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 376.0
PJD3_k127_91726_0 alpha beta - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006592 303.0
PJD3_k127_923703_0 histone H2A K63-linked ubiquitination - - - 0.000000000000000000000001658 110.0
PJD3_k127_930517_0 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 342.0
PJD3_k127_930517_1 Teichuronic acid biosynthesis glycosyltransferase tuaH - - - 0.0000000000000000000000000000000000002157 156.0
PJD3_k127_947142_0 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001398 282.0
PJD3_k127_947142_1 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000001038 139.0
PJD3_k127_95262_0 PFAM Inosine uridine-preferring nucleoside hydrolase K01239 - 3.2.2.1 0.00000000000000000000000000000000000000000000000001965 190.0
PJD3_k127_95262_1 TPR repeat - - - 0.00000000000000003677 93.0
PJD3_k127_95262_2 Outer membrane protein beta-barrel domain - - - 0.000000000000001054 85.0
PJD3_k127_95262_3 Alternative locus ID - - - 0.00000000000008896 85.0
PJD3_k127_95262_4 cell adhesion involved in biofilm formation - - - 0.0000001641 64.0
PJD3_k127_95262_5 SnoaL-like domain - - - 0.00001349 55.0
PJD3_k127_960617_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000003429 126.0
PJD3_k127_961585_0 RecG wedge domain K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 310.0
PJD3_k127_971318_0 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000066 400.0
PJD3_k127_971318_1 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000000000000007468 223.0
PJD3_k127_971318_2 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000008761 214.0
PJD3_k127_971318_3 Domain of unknown function DUF21 K03699 - - 0.000000000000000000000000000000008734 139.0
PJD3_k127_971318_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000003952 122.0
PJD3_k127_984670_0 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 540.0
PJD3_k127_984670_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007582 409.0
PJD3_k127_984670_2 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003898 339.0
PJD3_k127_984670_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001543 293.0
PJD3_k127_984670_4 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000001294 241.0
PJD3_k127_984670_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000718 173.0
PJD3_k127_984670_6 - - - - 0.000000000000000000000000000000000002224 153.0
PJD3_k127_984670_7 ECF sigma factor K03088 - - 0.00000000000000000000000000004038 126.0
PJD3_k127_984670_8 Peptidase family M20/M25/M40 - - - 0.000000000000001781 79.0