logo

Overview

ID MAG02948
Name PJD3_bin.6
Sample SMP0069
Taxonomy
Kingdom Archaea
Phylum Thermoproteota
Class Nitrososphaeria
Order Nitrososphaerales
Family Nitrosopumilaceae
Genus Nitrosomaritimum
Species
Assembly information
Completeness (%) 75.6
Contamination (%) 1.12
GC content (%) 34.0
N50 (bp) 6,022
Genome size (bp) 1,211,781

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1442

Gene name Description KEGG GOs EC E-value Score Sequence
PJD3_k127_1007135_0 Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 K03243 - - 0.0 1049.0
PJD3_k127_1007135_1 Belongs to the phosphohexose mutase family K15778 - 5.4.2.2,5.4.2.8 3.153e-226 707.0
PJD3_k127_1007135_2 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000001169 246.0
PJD3_k127_1007135_3 Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H ACA, box C D and box C' D' sRNAs K02936 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001435 242.0
PJD3_k127_1007135_4 Thioredoxin K03671 - - 0.0000000000000000000000000000000000000000000000000000000000000000000785 232.0
PJD3_k127_1007135_5 Binds to the 23S rRNA K02896 - - 0.0000000000000000000000000000000001041 132.0
PJD3_k127_1007135_6 protein secretion by the type IV secretion system - - - 0.0000000000000000000000000000000001106 134.0
PJD3_k127_1007135_7 Belongs to the eukaryotic ribosomal protein eS28 family K02979 - - 0.0000000000000000000000000000001682 123.0
PJD3_k127_1010152_0 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 599.0
PJD3_k127_1010152_1 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000000000000000000000000000000000000000000000000001503 194.0
PJD3_k127_1010152_2 - - - - 0.000000000000000000000000000000000000000000000931 176.0
PJD3_k127_1010152_3 - - - - 0.000000000000000008648 84.0
PJD3_k127_1056709_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 282.0
PJD3_k127_1056709_1 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.0000000000000000000000000000000000000000000000000000001491 194.0
PJD3_k127_1056709_2 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000000003737 180.0
PJD3_k127_1056709_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000006564 186.0
PJD3_k127_1056709_4 COG4618 ABC-type protease lipase transport system, ATPase and permease components - - - 0.0000000000000000000000000000000002208 136.0
PJD3_k127_1056709_5 - - - - 0.000000000000000000000000009338 111.0
PJD3_k127_1082287_0 histidine kinase HAMP region domain protein K03406,K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 483.0
PJD3_k127_1082287_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000947 295.0
PJD3_k127_1082287_2 response regulator, receiver K02485,K02490,K03413 - - 0.000000000000000000000000000000000001495 145.0
PJD3_k127_1095352_0 CBS domain K03498 - - 6.783e-289 897.0
PJD3_k127_1095352_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 420.0
PJD3_k127_1095352_2 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006963 244.0
PJD3_k127_1095352_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000524 212.0
PJD3_k127_1095352_4 PFAM Copper binding proteins, plastocyanin azurin family - - - 0.000000000000000000000000000000000000000001127 166.0
PJD3_k127_1095352_5 - - - - 0.00000000000000000000000000000000002203 136.0
PJD3_k127_1095352_6 Mut7-C RNAse domain - - - 0.0000000000000000000000000000003826 124.0
PJD3_k127_1095352_7 - - - - 0.000000000000000000000000000002153 123.0
PJD3_k127_1095352_8 HD domain K00951 - 2.7.6.5 0.0000000000000000000000003117 109.0
PJD3_k127_1095352_9 - - - - 0.0000000000000001319 82.0
PJD3_k127_11423_0 PFAM Nucleotidyl transferase K00966,K03430 - 2.6.1.37,2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 369.0
PJD3_k127_11423_1 DNA-directed RNA polymerase, alpha subunit 40 kD subunit K03047 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 363.0
PJD3_k127_11423_2 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001181 278.0
PJD3_k127_11423_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000001661 237.0
PJD3_k127_11423_4 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000004587 222.0
PJD3_k127_11423_5 3-isopropylmalate dehydratase, large subunit K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000003827 175.0
PJD3_k127_11423_6 Belongs to the eukaryotic ribosomal protein eL18 family K02883 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000002354 89.0
PJD3_k127_11423_7 Shwachman-Bodian-Diamond syndrome (SBDS) protein K14574 - - 0.00000000006159 62.0
PJD3_k127_1256870_0 Sulfite reductase K00392 - 1.8.7.1 0.0 1024.0
PJD3_k127_1256870_1 TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 583.0
PJD3_k127_1256870_2 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 527.0
PJD3_k127_1256870_3 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 457.0
PJD3_k127_125883_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008251 569.0
PJD3_k127_125883_1 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005553 460.0
PJD3_k127_125883_2 sister chromatid segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 382.0
PJD3_k127_125883_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004578 244.0
PJD3_k127_125883_4 Involved in the catabolism of quinolinic acid (QA) K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000002573 213.0
PJD3_k127_125883_5 PFAM TPR repeat-containing protein - - - 0.000000000000000000000000000000000000008016 148.0
PJD3_k127_1353710_0 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000003602 199.0
PJD3_k127_1353710_1 - - - - 0.00000000000001974 83.0
PJD3_k127_1353710_2 - - - - 0.000000000007734 75.0
PJD3_k127_1353710_3 - - - - 0.0000000007051 59.0
PJD3_k127_1353710_4 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.00002074 47.0
PJD3_k127_1389844_0 DEAD/H associated K03724 - - 0.0 1333.0
PJD3_k127_1389844_1 S-adenosylmethionine synthetase K00789 - 2.5.1.6 1.504e-233 724.0
PJD3_k127_1389844_2 RecA RadA K04482,K04483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 296.0
PJD3_k127_1389844_3 snRNP Sm proteins K04796 - - 0.00000000000000000000000000000000000001086 145.0
PJD3_k127_1389844_4 NAD(P)H-binding K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000004981 127.0
PJD3_k127_1389844_5 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A K02188 - 2.1.1.195 0.00000002521 56.0
PJD3_k127_1412465_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 585.0
PJD3_k127_1412465_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 394.0
PJD3_k127_1412465_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 341.0
PJD3_k127_1447673_0 RNase L inhibitor, RLI K06174 - - 0.0 1075.0
PJD3_k127_1447673_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 3.783e-241 752.0
PJD3_k127_1447673_2 Met-10+ like-protein K15429 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 473.0
PJD3_k127_1447673_3 FR47-like protein K03789 - 2.3.1.128 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 298.0
PJD3_k127_1447673_4 HTH DNA binding domain - - - 0.000000000000000000000000000000206 124.0
PJD3_k127_1447673_5 Peptidase family M50 - - - 0.000000000000000006565 88.0
PJD3_k127_1450824_0 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 1.31e-321 990.0
PJD3_k127_1450824_1 Catalyzes two subsequent steps in gluconeogenesis the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P) K01622 - 3.1.3.11,4.1.2.13 6.834e-226 702.0
PJD3_k127_1450824_2 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 381.0
PJD3_k127_1450824_3 tRNA intron endonuclease, N-terminal domain K01170 - 4.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 332.0
PJD3_k127_1450824_4 - - - - 0.00000000000000000000000000000000000000000000000000000000001049 209.0
PJD3_k127_1450824_5 - - - - 0.00000000000000000000000000000000000000000000000000000007086 197.0
PJD3_k127_1450824_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K03231 - - 0.0000000000000000000000000000000000007179 140.0
PJD3_k127_1450824_7 - - - - 0.00000000000000000000000000000000007324 134.0
PJD3_k127_1450824_8 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000003163 108.0
PJD3_k127_1452209_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1125.0
PJD3_k127_1452209_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.312e-209 666.0
PJD3_k127_1549132_0 NAD-dependent epimerase dehydratase K01710 - 4.2.1.46 1.485e-218 685.0
PJD3_k127_1549132_1 PFAM DNA photolyase FAD-binding K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 445.0
PJD3_k127_1549132_2 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007357 359.0
PJD3_k127_1549132_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006057 334.0
PJD3_k127_1549132_4 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 312.0
PJD3_k127_1549132_5 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000001106 174.0
PJD3_k127_1549132_6 - - - - 0.00000000000000000000001091 100.0
PJD3_k127_1557187_0 AAA ATPase domain - - - 0.0 1209.0
PJD3_k127_1557187_1 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.0 1046.0
PJD3_k127_1557187_10 Protein of unknown function (DUF541) K09807 - - 0.00000000000000000000000000000000000000000000000000000000000006533 222.0
PJD3_k127_1557187_11 K homology RNA-binding domain K06961 - - 0.0000000000000000000000000000000000000000000000000000000648 201.0
PJD3_k127_1557187_12 - - - - 0.0000000000000000000000000000000000000000000000172 172.0
PJD3_k127_1557187_13 - - - - 0.000000000000000000000000000000000000000000009289 164.0
PJD3_k127_1557187_14 Protein of unknown function (DUF424) K09148 - - 0.00000000000000000000000000000000000002559 145.0
PJD3_k127_1557187_15 - - - - 0.00000000000000001277 84.0
PJD3_k127_1557187_16 - - - - 0.00000000000000004049 83.0
PJD3_k127_1557187_2 - - - - 2.163e-270 849.0
PJD3_k127_1557187_3 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 - 5.99.1.3 1.339e-226 704.0
PJD3_k127_1557187_4 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 484.0
PJD3_k127_1557187_5 Serine threonine protein kinase involved in cell cycle control K07178 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009001 421.0
PJD3_k127_1557187_6 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004854 302.0
PJD3_k127_1557187_7 Belongs to the small heat shock protein (HSP20) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007614 278.0
PJD3_k127_1557187_8 Translation initiation factor K03238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008371 269.0
PJD3_k127_1557187_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003711 239.0
PJD3_k127_1616500_0 UbiD family decarboxylase - - - 1.409e-247 768.0
PJD3_k127_1616500_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 317.0
PJD3_k127_1616500_2 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002088 270.0
PJD3_k127_1616500_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004183 246.0
PJD3_k127_1616500_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000004315 214.0
PJD3_k127_1616500_5 - - - - 0.00000000000000000000000000000000000000000000000000000000003541 207.0
PJD3_k127_1616500_6 - - - - 0.0000000000000000000000000000000000000000446 154.0
PJD3_k127_1616500_7 - - - - 0.00000000000000000004794 94.0
PJD3_k127_163551_0 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 508.0
PJD3_k127_163551_1 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007284 265.0
PJD3_k127_163551_2 - - - - 0.00004802 47.0
PJD3_k127_163551_3 Oocyst wall protein - - - 0.00006006 55.0
PJD3_k127_1641746_0 MGS-like domain K01955 - 6.3.5.5 0.0 1113.0
PJD3_k127_1641746_1 carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 1.433e-215 673.0
PJD3_k127_1641746_2 AAA domain (Cdc48 subfamily) - - - 4.377e-197 616.0
PJD3_k127_1641746_3 MGS-like domain K01955 - 6.3.5.5 0.000002057 49.0
PJD3_k127_1642640_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K03231 - - 7.338e-207 644.0
PJD3_k127_1642640_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002166 265.0
PJD3_k127_1642640_2 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000000000000001862 211.0
PJD3_k127_1642640_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03059 - 2.7.7.6 0.00000000000000000000000000000002023 126.0
PJD3_k127_1642640_4 Zinc finger, C2H2 type - - - 0.0000000000000000000004504 96.0
PJD3_k127_1727131_0 Alpha beta hydrolase K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 292.0
PJD3_k127_1727131_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000003798 228.0
PJD3_k127_1727131_2 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000001045 209.0
PJD3_k127_1727131_3 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids K02548,K17105,K20616 - 2.5.1.42,2.5.1.74 0.00000000000000000000000000000000004455 147.0
PJD3_k127_1727131_4 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.00000000000000000000001242 102.0
PJD3_k127_1727131_5 - - - - 0.0000000000339 65.0
PJD3_k127_1727131_6 - - - - 0.0000001493 54.0
PJD3_k127_1854_0 - - - - 0.000000000000000000000000000000000000000000002176 168.0
PJD3_k127_1854_1 sister chromatid segregation - - - 0.0000000000000009782 90.0
PJD3_k127_1854_2 - - - - 0.00000000000004008 85.0
PJD3_k127_1854_3 - - - - 0.000000000007069 66.0
PJD3_k127_1854_4 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0004464 51.0
PJD3_k127_1873063_0 COG1525 Micrococcal nuclease (thermonuclease) homologs K01174 - 3.1.31.1 0.000000000000000000000000000000000000000000121 173.0
PJD3_k127_1873063_2 - - - - 0.00000000000000000000000000000000000003555 146.0
PJD3_k127_1873063_3 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.0000005334 61.0
PJD3_k127_194481_0 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004923 382.0
PJD3_k127_194481_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000337 266.0
PJD3_k127_194481_2 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001646 251.0
PJD3_k127_194481_3 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000468 207.0
PJD3_k127_194481_4 - - - - 0.0000000000000000000000000000000000000000000000000000000414 198.0
PJD3_k127_194481_5 membrane protein domain - - - 0.00000000000000000000000000000000000000000000009327 172.0
PJD3_k127_1994669_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K18604 - 2.1.3.15,6.4.1.2,6.4.1.3 6.463e-319 978.0
PJD3_k127_1994669_1 plastoquinone (complex I) K00342,K12137,K12141 - 1.6.5.3 2.925e-310 953.0
PJD3_k127_1994669_10 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 437.0
PJD3_k127_1994669_11 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 443.0
PJD3_k127_1994669_12 Belongs to the complex I 20 kDa subunit family K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 365.0
PJD3_k127_1994669_13 4Fe-4S binding domain K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 340.0
PJD3_k127_1994669_14 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005182 288.0
PJD3_k127_1994669_15 NADH ubiquinone oxidoreductase 27 kD subunit K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005081 274.0
PJD3_k127_1994669_16 Biotin-requiring enzyme K18605 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008483 268.0
PJD3_k127_1994669_17 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 3 K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000008333 200.0
PJD3_k127_1994669_18 - - - - 0.000000000000000000000000000000000000000000000006263 173.0
PJD3_k127_1994669_19 NADH ubiquinone oxidoreductase subunit 11 or 4L (chain K) K00340 - 1.6.5.3 0.000000000000000000000000000000000000000000000008036 172.0
PJD3_k127_1994669_2 Carbamoyl-phosphate synthase L chain K18603 - 6.4.1.2,6.4.1.3 9.053e-287 884.0
PJD3_k127_1994669_20 membrane - - - 0.00000000000000000000000000000000000000000001655 164.0
PJD3_k127_1994669_21 - K03646 - - 0.00000000000000000000000000000000000000004771 160.0
PJD3_k127_1994669_22 - - - - 0.00000000000000000000000000000000000000008638 153.0
PJD3_k127_1994669_23 acid phosphatase activity - - - 0.0000000000000000000000000001788 127.0
PJD3_k127_1994669_24 Protein of unknown function (DUF1059) - - - 0.0000000000000000000007467 95.0
PJD3_k127_1994669_25 protein secretion by the type IV secretion system - - - 0.0000001263 63.0
PJD3_k127_1994669_3 NADH dehydrogenase K00337 - 1.6.5.3 3.227e-245 760.0
PJD3_k127_1994669_4 Belongs to the complex I 49 kDa subunit family K00333 - 1.6.5.3 6.093e-229 711.0
PJD3_k127_1994669_5 ATPase family associated with various cellular activities (AAA) K04800 - - 5.777e-210 656.0
PJD3_k127_1994669_6 glycosyl transferase family 2 K00721 - 2.4.1.83 9.837e-208 651.0
PJD3_k127_1994669_7 - - - - 1.545e-198 623.0
PJD3_k127_1994669_8 oxidoreductase FAD NAD(P)-binding K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 461.0
PJD3_k127_1994669_9 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005736 459.0
PJD3_k127_2003817_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K00313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 525.0
PJD3_k127_2003817_1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 492.0
PJD3_k127_2003817_2 HD domain K00951,K01139 - 2.7.6.5,3.1.7.2 0.00000000000000000000000000000000000000000000000000000000000000000003209 240.0
PJD3_k127_201577_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 432.0
PJD3_k127_201577_1 - - - - 0.00000000000000000000000000000000000000000000000000002773 188.0
PJD3_k127_201577_2 ATPase family associated with various cellular activities (AAA) K04800 - - 0.000000000000000000000000000000000000000000003358 164.0
PJD3_k127_201577_3 - K03646 - - 0.000000000000000000000000000000000000002351 155.0
PJD3_k127_201577_4 oxidoreductase FAD NAD(P)-binding K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000008543 145.0
PJD3_k127_201577_5 Protein of unknown function (DUF1059) - - - 0.0000000000000000000002882 96.0
PJD3_k127_2015802_0 - - - - 0.0 1289.0
PJD3_k127_2015802_1 cation diffusion facilitator family transporter - - - 2.05e-228 713.0
PJD3_k127_2015802_2 PFAM Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006357 599.0
PJD3_k127_2015802_3 divalent heavy-metal cations transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 510.0
PJD3_k127_2015802_4 - - - - 0.000000000000000000000000000000000001276 144.0
PJD3_k127_2015802_5 - - - - 0.000000000000000000000000000005829 121.0
PJD3_k127_2015802_6 protein secretion by the type IV secretion system - - - 0.000000009629 63.0
PJD3_k127_2122491_0 nucleotidyltransferase activity K07076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 443.0
PJD3_k127_2122491_1 COG1061 DNA or RNA helicases of superfamily II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 365.0
PJD3_k127_2122491_2 tRNA intron endonuclease, N-terminal domain K01170 - 4.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 316.0
PJD3_k127_2122491_3 helix_turn_helix ASNC type - - - 0.00000000000000000000000000000000000000000000000000000000000005951 216.0
PJD3_k127_2122491_4 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000005965 194.0
PJD3_k127_2122491_5 - - - - 0.00000000000000000000000000000000000000000001757 162.0
PJD3_k127_2135882_0 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 542.0
PJD3_k127_2135882_1 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007558 391.0
PJD3_k127_2141620_0 Domain of unknown function (DUF2088) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 574.0
PJD3_k127_2141620_1 NADH ubiquinone oxidoreductase subunit 2 (Chain N) K22169 - 1.5.98.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005993 556.0
PJD3_k127_2141620_2 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 439.0
PJD3_k127_2141620_3 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 413.0
PJD3_k127_2141620_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 318.0
PJD3_k127_2141620_5 Peptidase family M50 - - - 0.000000000000000000001377 96.0
PJD3_k127_2172923_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 2.543e-213 667.0
PJD3_k127_2172923_1 DNA-directed RNA polymerase K03049 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 361.0
PJD3_k127_2172923_2 Involved in the catabolism of quinolinic acid (QA) K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000003474 219.0
PJD3_k127_2172923_3 Belongs to the UPF0218 family K09735 - - 0.000000000000000000000000000000000000000000000000000000000000003681 220.0
PJD3_k127_2172923_4 Transcription elongation factor Spt4 K03050 - 2.7.7.6 0.0000000000000000000000000003801 113.0
PJD3_k127_2172923_5 - K07043 - - 0.00000001842 56.0
PJD3_k127_2180007_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 4.342e-257 796.0
PJD3_k127_2180007_1 Proteasome endopeptidase complex K03432 - 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007708 417.0
PJD3_k127_2180007_2 glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 366.0
PJD3_k127_2180007_3 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005291 310.0
PJD3_k127_2180007_4 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 295.0
PJD3_k127_2180007_5 regulatory protein, arsR - - - 0.00000000000000000000000000000000000000000000000000000008383 198.0
PJD3_k127_2180007_6 Toprim domain - - - 0.0000000000000000000000000000000000000000000002872 169.0
PJD3_k127_2206841_0 Belongs to the RtcB family K14415 - 6.5.1.3 2.89e-243 754.0
PJD3_k127_2206841_1 PFAM malic K00027 - 1.1.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 370.0
PJD3_k127_2225177_0 TIGRFAM glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 - 2.6.1.16 5.15e-221 692.0
PJD3_k127_2225177_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 282.0
PJD3_k127_2225177_2 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001003 276.0
PJD3_k127_2244391_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 9.035e-319 979.0
PJD3_k127_2244391_1 LAO AO transport system ATPase K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008247 521.0
PJD3_k127_2244391_2 - - - - 0.0000000000000000001821 89.0
PJD3_k127_2269113_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 361.0
PJD3_k127_2269113_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001605 265.0
PJD3_k127_2269113_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001461 260.0
PJD3_k127_2269113_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000007648 142.0
PJD3_k127_2269113_4 - - - - 0.00000000002913 63.0
PJD3_k127_2269113_5 Exonuclease - - - 0.0002845 51.0
PJD3_k127_2308734_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 2.101e-231 721.0
PJD3_k127_2308734_1 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000788 551.0
PJD3_k127_2308734_2 8-amino-7-oxononanoate synthase K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000001968 170.0
PJD3_k127_2308734_3 - - - - 0.0000000001753 64.0
PJD3_k127_233101_0 Succinyl-CoA ligase like flavodoxin domain K18594 - - 0.0 1277.0
PJD3_k127_233101_1 Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO K18931 - 2.4.2.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 473.0
PJD3_k127_233101_2 Putative TM nitroreductase - - - 0.0000000000000000000000000000000000000000007473 162.0
PJD3_k127_233101_3 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000000000002142 98.0
PJD3_k127_233101_4 - - - - 0.0000000000000009893 78.0
PJD3_k127_2335960_0 PFAM Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 2.001e-197 619.0
PJD3_k127_2335960_1 factor TFIIB K03124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 570.0
PJD3_k127_2335960_10 SRP19 protein K03105 - - 0.00000000000000000000000000000000000000000001514 163.0
PJD3_k127_2335960_11 RNA-binding protein involved in rRNA processing K07569 - - 0.000000000000000000000000000000001871 130.0
PJD3_k127_2335960_12 Cold shock protein domain K03704 - - 0.0000000000000000000000000000002629 123.0
PJD3_k127_2335960_13 CBS domain - - - 0.000000000000000000003168 96.0
PJD3_k127_2335960_14 DUF167 K09131 - - 0.000000000000000000666 87.0
PJD3_k127_2335960_15 Chlorite dismutase - - - 0.00000000000001348 74.0
PJD3_k127_2335960_2 FeS assembly ATPase SufC K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 480.0
PJD3_k127_2335960_3 chromosome segregation and condensation protein ScpA K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 363.0
PJD3_k127_2335960_4 segregation and condensation protein K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 313.0
PJD3_k127_2335960_5 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008579 292.0
PJD3_k127_2335960_6 CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003 233.0
PJD3_k127_2335960_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000002665 217.0
PJD3_k127_2335960_8 Ribosomal protein S8e K02995 - - 0.00000000000000000000000000000000000000000000000000000000000007273 214.0
PJD3_k127_2335960_9 Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits K03236 - - 0.000000000000000000000000000000000000000000000000000000000004845 207.0
PJD3_k127_2348336_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 7.869e-246 761.0
PJD3_k127_2348336_1 SUF system FeS assembly protein K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002315 263.0
PJD3_k127_2348336_2 of nitrite reductase and ring-hydroxylating K05710 - - 0.000000000000000000000000000000000000000000000007322 173.0
PJD3_k127_2348336_3 FeS assembly protein SufD K09014,K09015 - - 0.0000000000000000000000000000000000000000000001195 168.0
PJD3_k127_2348336_4 - - - - 0.0000000000000000000000000000000000000000002566 160.0
PJD3_k127_2348336_5 Phosphoglycerate kinase K00927 - 2.7.2.3 0.000000000000000000000000000000000000000002396 156.0
PJD3_k127_2396871_0 Amidohydrolase family K01464 - 3.5.2.2 4.795e-247 767.0
PJD3_k127_2396871_1 Ribose 5-phosphate isomerase K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 340.0
PJD3_k127_2396871_2 sister chromatid segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000002683 244.0
PJD3_k127_2396871_3 Cupredoxin-like domain - - - 0.000000000000000000000000000000000000000000000000000006336 194.0
PJD3_k127_2424970_0 elongation factor Tu - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 495.0
PJD3_k127_2424970_1 Cytidylyltransferase-like K00952 - 2.7.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005635 287.0
PJD3_k127_2424970_2 extracellular matrix structural constituent K12287 - - 0.00000000000002271 86.0
PJD3_k127_2431162_0 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008756 535.0
PJD3_k127_2431162_1 ester cyclase K06893 - - 0.00000000000000000000000000000000000000000000000000000000000001043 217.0
PJD3_k127_2431162_2 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 - - 0.000000000000000000000000000000000000000000000000002104 183.0
PJD3_k127_2431162_3 HEAT repeats - - - 0.000000000000000000000000000000000000000002381 158.0
PJD3_k127_2431162_4 Belongs to the P(II) protein family K04751 - - 0.000000005514 59.0
PJD3_k127_248652_0 Na+-dependent bicarbonate transporter superfamily K07086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 582.0
PJD3_k127_248652_1 Domain of unknown function (DUF4162) K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 562.0
PJD3_k127_248652_2 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 548.0
PJD3_k127_248652_3 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 480.0
PJD3_k127_248652_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 437.0
PJD3_k127_248652_5 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 355.0
PJD3_k127_248652_6 Belongs to the glycosyl hydrolase 18 family - - - 0.00000000000000000000000000000000000000000000004707 191.0
PJD3_k127_248652_7 COG3291 FOG PKD repeat - - - 0.00000000000001438 87.0
PJD3_k127_2492880_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 293.0
PJD3_k127_2492880_2 - - - - 0.00000000000001501 83.0
PJD3_k127_2492880_3 - - - - 0.000000000000411 79.0
PJD3_k127_2492880_4 - - - - 0.00000000000213 69.0
PJD3_k127_2516576_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 382.0
PJD3_k127_2516576_1 ribosomal protein K02956 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 297.0
PJD3_k127_2516576_2 - - - - 0.0000000000000000000000000000000000000000000000000000000001987 204.0
PJD3_k127_2516576_3 - - - - 0.00000000000000000000000000000000000000000000000000000009582 194.0
PJD3_k127_2516576_4 DHHA1 domain K07463 - - 0.00000000000000000000000000000000000000006399 151.0
PJD3_k127_2546823_0 Histone acetyltransferase K07739 - 2.3.1.48 3.005e-287 887.0
PJD3_k127_2546823_1 Sodium hydrogen exchanger - - - 4.101e-211 661.0
PJD3_k127_2546823_2 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006853 577.0
PJD3_k127_2546823_3 PAC2 family K06869 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005348 397.0
PJD3_k127_2546823_4 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007342 320.0
PJD3_k127_2546823_5 serine-type endopeptidase activity - - - 0.00000000000000000000000000000000000000000000000002571 187.0
PJD3_k127_2546823_6 - - - - 0.000000002312 59.0
PJD3_k127_2563546_0 Anticodon-binding domain of tRNA K01873 - 6.1.1.9 0.0 1448.0
PJD3_k127_2563546_1 aconitate hydratase K01681 - 4.2.1.3 0.0 1373.0
PJD3_k127_2563546_10 Transcriptional regulator - - - 0.00000000000000000000000000000000008864 134.0
PJD3_k127_2563546_2 adenylosuccinate lyase K01756 - 4.3.2.2 8.099e-251 778.0
PJD3_k127_2563546_3 Belongs to the PdxS SNZ family K06215 - 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005788 569.0
PJD3_k127_2563546_4 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 482.0
PJD3_k127_2563546_5 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 283.0
PJD3_k127_2563546_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002179 277.0
PJD3_k127_2563546_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001797 250.0
PJD3_k127_2563546_8 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000002327 222.0
PJD3_k127_2563546_9 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000006925 158.0
PJD3_k127_2575139_0 Glycosyl transferase family group 2 - - - 0.0 1044.0
PJD3_k127_2575139_1 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 569.0
PJD3_k127_2575139_10 - - - - 0.00000000000000000000000000000000000000000000000008908 178.0
PJD3_k127_2575139_11 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04798 - - 0.00000000000000000000000000000000000000000327 158.0
PJD3_k127_2575139_12 Ribosomal L37ae protein family K02921 - - 0.000000000000000000000000000000001575 130.0
PJD3_k127_2575139_13 PIN domain of ribonuclease K07060 - - 0.000000000000000000000000000001638 126.0
PJD3_k127_2575139_2 ferredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005457 551.0
PJD3_k127_2575139_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 473.0
PJD3_k127_2575139_4 Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'- 5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails K11600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009504 454.0
PJD3_k127_2575139_5 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site K12589 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 452.0
PJD3_k127_2575139_6 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome K03679 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008413 419.0
PJD3_k127_2575139_7 ERCC4 domain K10848 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 394.0
PJD3_k127_2575139_8 Shwachman-Bodian-Diamond syndrome (SBDS) protein K14574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 311.0
PJD3_k127_2575139_9 TIGRFAM CRISPR-associated protein Cas4 K03466,K07464,K15342,K19465 - 3.1.12.1 0.0000000000000000000000000000000000000000000000000000000000001073 219.0
PJD3_k127_2597495_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.0 1361.0
PJD3_k127_2597495_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K09482 - 6.3.5.7 3.468e-212 665.0
PJD3_k127_2597495_2 PP-loop family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 522.0
PJD3_k127_2597495_3 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 452.0
PJD3_k127_2597495_4 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K03330 - 6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 293.0
PJD3_k127_2597495_5 Acylphosphatase K01512 - 3.6.1.7 0.00000000000000000000000000000000000001143 145.0
PJD3_k127_2659709_0 Sodium hydrogen exchanger K11105 - - 1.395e-282 870.0
PJD3_k127_2659709_1 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 446.0
PJD3_k127_2659709_2 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 371.0
PJD3_k127_2659709_3 Catalyzes the synthesis of activated sulfate K00860,K07028 - 2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 334.0
PJD3_k127_2659709_4 3'(2'),5'-bisphosphate nucleotidase activity K01082 - 3.1.3.7 0.000000002783 60.0
PJD3_k127_2673839_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 4.2e-322 990.0
PJD3_k127_2673839_1 Protein of unknown function (DUF726) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 389.0
PJD3_k127_2673839_2 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K01251 - 3.3.1.1 0.000000000000000000000000000000005419 128.0
PJD3_k127_2673839_3 domain protein K20276 - - 0.000000000118 74.0
PJD3_k127_2675831_0 Belongs to the MCM family K10726 - - 0.0 1262.0
PJD3_k127_2675831_1 DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks K03726 - - 0.0 1174.0
PJD3_k127_2675831_10 - - - - 0.00000000000000001838 85.0
PJD3_k127_2675831_11 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 0.0000136 50.0
PJD3_k127_2675831_2 Replication factor C K04801 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 529.0
PJD3_k127_2675831_3 glycosyl transferase family K01001 - 2.7.8.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 469.0
PJD3_k127_2675831_4 Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex K03264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 342.0
PJD3_k127_2675831_5 PFAM 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009574 304.0
PJD3_k127_2675831_6 PFAM 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 284.0
PJD3_k127_2675831_7 GINS complex protein K09723 - - 0.000000000000000000000000000000000000000000009906 168.0
PJD3_k127_2675831_8 Trm112p-like protein - - - 0.0000000000000000000000000000000000004496 141.0
PJD3_k127_2675831_9 Oxidoreductase family, NAD-binding Rossmann fold K18855 - 1.1.1.374 0.00000000000000000000000004503 111.0
PJD3_k127_273114_0 Tyrosine--tRNA ligase K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 597.0
PJD3_k127_273114_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 330.0
PJD3_k127_273114_2 dUTPase - - - 0.000000000000000000000000000000000000000000000000000000000005425 209.0
PJD3_k127_273114_3 Tetrahydromethanopterin S-methyltransferase, subunit A K00577 - 2.1.1.86 0.00000000000000000000000000000000000000000000000000000000007104 207.0
PJD3_k127_273114_4 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000001815 159.0
PJD3_k127_273114_5 zinc finger - - - 0.0000000000000000000000000006703 113.0
PJD3_k127_2777228_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K03234 - - 0.0 1333.0
PJD3_k127_2777228_1 Radical SAM K18285 - 2.5.1.120 5.596e-202 632.0
PJD3_k127_2777228_10 - - - - 0.00000000000000002139 86.0
PJD3_k127_2777228_11 - - - - 0.000000000005829 68.0
PJD3_k127_2777228_2 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 507.0
PJD3_k127_2777228_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 318.0
PJD3_k127_2777228_4 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K07646,K20989 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000007374 209.0
PJD3_k127_2777228_5 - - - - 0.00000000000000000000000000000000000000000000000143 174.0
PJD3_k127_2777228_6 Thiamine-binding protein - - - 0.000000000000000000000000000000000758 132.0
PJD3_k127_2777228_7 - - - - 0.000000000000000000000000000000003518 130.0
PJD3_k127_2777228_8 Multicopper oxidase K00368 - 1.7.2.1 0.0000000000000000000000000002791 126.0
PJD3_k127_2777228_9 zinc finger - - - 0.000000000000000000000001377 103.0
PJD3_k127_2895826_0 Multicopper oxidase K00368 - 1.7.2.1 1.472e-282 871.0
PJD3_k127_2895826_1 Fumarase C C-terminus K01744 - 4.3.1.1 1.13e-263 815.0
PJD3_k127_2895826_2 MiaB-like tRNA modifying enzyme K15865 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007054 548.0
PJD3_k127_2895826_3 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 547.0
PJD3_k127_2895826_4 copper ion binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000012 291.0
PJD3_k127_2895826_5 Ribosomal protein L15E K02877 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007121 271.0
PJD3_k127_2895826_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004161 270.0
PJD3_k127_2895826_7 - - - - 0.000000000000000000000000000000000000000000000000000000001925 206.0
PJD3_k127_2895826_8 - - - - 0.00000000000000000000000003249 114.0
PJD3_k127_290811_0 Acetyl-coenzyme A synthetase N-terminus K01895 - 6.2.1.1 3.1e-322 994.0
PJD3_k127_290811_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 1.229e-241 751.0
PJD3_k127_290811_2 protein secretion by the type IV secretion system - - - 0.0000000000000000000000000000000000000000000000000000000000005162 224.0
PJD3_k127_290811_3 Peptidase A24A, prepilin type IV K02278,K07991 - 3.4.23.43,3.4.23.52 0.0000000000000000000000003044 114.0
PJD3_k127_291003_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 540.0
PJD3_k127_291003_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 452.0
PJD3_k127_291003_2 response regulator, receiver K03413,K07662,K07667 - - 0.0000000000000000000000000000009116 124.0
PJD3_k127_291003_3 - - - - 0.00005403 47.0
PJD3_k127_2966156_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.874e-219 685.0
PJD3_k127_2966156_1 Belongs to the UPF0284 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 539.0
PJD3_k127_2966156_10 - - - - 0.0000000000000000000000000000000000000000000000000177 190.0
PJD3_k127_2966156_11 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03058 - 2.7.7.6 0.000000000000000000000000000000000000000000000003266 173.0
PJD3_k127_2966156_12 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000006202 140.0
PJD3_k127_2966156_2 Amino acid kinase family K06981 - 2.7.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 432.0
PJD3_k127_2966156_3 Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)-mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids K00869 - 2.7.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 430.0
PJD3_k127_2966156_4 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 379.0
PJD3_k127_2966156_5 Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX K17759 - 5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 373.0
PJD3_k127_2966156_6 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009166 345.0
PJD3_k127_2966156_7 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 349.0
PJD3_k127_2966156_8 NUDIX domain K01823 - 5.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006971 335.0
PJD3_k127_2966156_9 Translin family K07477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 298.0
PJD3_k127_2976025_0 Domain of unknown function (DUF373) K08975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006827 606.0
PJD3_k127_2976025_1 - - - - 0.00000000000000000000000000000000000000000000000000001332 194.0
PJD3_k127_2976025_2 - - - - 0.000000000000000000000003462 101.0
PJD3_k127_3010053_0 RNA methylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 376.0
PJD3_k127_3010053_1 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000003247 233.0
PJD3_k127_3010053_2 Rieske 2Fe-2S K05710 - - 0.00000000000000000000000000000000000000000000000000001978 188.0
PJD3_k127_3010053_3 - - - - 0.00000000000000000000000000000000000000000000000000008123 188.0
PJD3_k127_3010053_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000002716 181.0
PJD3_k127_3010053_5 Belongs to the UPF0147 family K09721 - - 0.0000000000000000000000000000000000000003788 149.0
PJD3_k127_3010053_6 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000000000000006598 106.0
PJD3_k127_3010053_8 - - - - 0.00008544 47.0
PJD3_k127_3012010_0 Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex K03264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 441.0
PJD3_k127_3012010_1 PFAM 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 400.0
PJD3_k127_3012010_2 PFAM 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 362.0
PJD3_k127_3012010_3 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000004346 136.0
PJD3_k127_3012010_4 Replication factor C K04801 - - 0.000000000004557 65.0
PJD3_k127_3013845_0 Sodium hydrogen exchanger K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 501.0
PJD3_k127_3013845_1 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007752 450.0
PJD3_k127_3013845_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009273 440.0
PJD3_k127_3013845_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 349.0
PJD3_k127_3013845_4 Isocitrate isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000003494 203.0
PJD3_k127_3013845_5 - - - - 0.0000000000000000000000000845 106.0
PJD3_k127_3013845_6 - - - - 0.00000000000000000000001222 100.0
PJD3_k127_3076398_0 Subtilase family - - - 0.0 1308.0
PJD3_k127_3076398_1 Cytochrome b subunit of the bc complex K00412 - - 8.564e-280 864.0
PJD3_k127_3076398_2 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 392.0
PJD3_k127_3076398_3 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 371.0
PJD3_k127_3076398_4 PFAM Copper binding proteins, plastocyanin azurin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001524 233.0
PJD3_k127_3076398_5 - - - - 0.0000000000000000000000000000000000000000000000000000000001799 205.0
PJD3_k127_3076398_6 PFAM Rieske 2Fe-2S domain K15878 - - 0.000000387 59.0
PJD3_k127_3093155_0 Large family of predicted nucleotide-binding domains K06865 - - 6.754e-293 908.0
PJD3_k127_3093155_1 modulator of DNA gyrase K03568 - - 3.41e-217 682.0
PJD3_k127_3093155_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000812 376.0
PJD3_k127_3093155_3 iron dependent repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000001059 236.0
PJD3_k127_3093155_4 - - - - 0.0000000000000000000000000000000000000000000000000000002392 195.0
PJD3_k127_3093155_5 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000001195 164.0
PJD3_k127_3093155_6 uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000004273 111.0
PJD3_k127_3128726_0 Ammonium Transporter K03320 - - 5.565e-229 715.0
PJD3_k127_3128726_1 Radical SAM K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 608.0
PJD3_k127_3128726_10 - - - - 0.00000000000000000000000000000000000000000000002557 177.0
PJD3_k127_3128726_11 Belongs to the archaeal rpoM eukaryotic RPA12 RPB9 RPC11 RNA polymerase family K03057 - - 0.000000000000000000000000000000000000000000003269 165.0
PJD3_k127_3128726_12 RNA polymerase Rpb3/Rpb11 dimerisation domain K03056 - 2.7.7.6 0.00000000000000000000000000000000000000007036 152.0
PJD3_k127_3128726_13 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000002458 149.0
PJD3_k127_3128726_14 Lrp/AsnC ligand binding domain - - - 0.00000000000000000000000000000000000002681 144.0
PJD3_k127_3128726_15 - - - - 0.00000000000000000000000000867 113.0
PJD3_k127_3128726_16 - - - - 0.00000000000000000000001859 100.0
PJD3_k127_3128726_17 - - - - 0.0000000000000000137 82.0
PJD3_k127_3128726_18 Belongs to the P(II) protein family K02589 - - 0.000000000001965 71.0
PJD3_k127_3128726_2 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 591.0
PJD3_k127_3128726_3 copper ion binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008028 524.0
PJD3_k127_3128726_4 Dual specificity phosphatase, catalytic domain K14165 - 3.1.3.16,3.1.3.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 295.0
PJD3_k127_3128726_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006817 295.0
PJD3_k127_3128726_6 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 286.0
PJD3_k127_3128726_7 Adenylate guanylate cyclase with integral membrane sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002785 265.0
PJD3_k127_3128726_8 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00390,K05337 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000003176 223.0
PJD3_k127_3128726_9 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000000000000000000613 218.0
PJD3_k127_3132974_0 TIGRFAM poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 - - 9.726e-218 677.0
PJD3_k127_3132974_1 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008579 536.0
PJD3_k127_3132974_2 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 315.0
PJD3_k127_3132974_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001172 223.0
PJD3_k127_3132974_4 COG2002 Regulators of stationary sporulation gene expression - - - 0.0000000000000000000000000000000000000000000000000000000000000006235 221.0
PJD3_k127_3132974_5 phosphoribosyltransferase K07101 - - 0.000000000000000000000000000000000000000000000000006889 184.0
PJD3_k127_3132974_6 Alpha beta hydrolase - - - 0.000000000000000000000000000000000004041 138.0
PJD3_k127_321371_0 Beta propeller domain - - - 0.0 1045.0
PJD3_k127_321371_1 regulatory protein, arsR - - - 0.00000000000000000000000000000000000000000000001015 173.0
PJD3_k127_3310126_0 Catalyzes the NAD(P)( )-dependent oxidation of D-glucose to D-gluconate via gluconolactone. Can utilize both NAD( ) and NADP( ) as electron acceptor. Is involved in the degradation of glucose through a K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009181 476.0
PJD3_k127_3310126_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000732 395.0
PJD3_k127_3310126_2 COG1522 Transcriptional regulators - - - 0.000000000000000000000000984 111.0
PJD3_k127_3310126_3 - - - - 0.000006756 54.0
PJD3_k127_3371997_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 1.171e-226 709.0
PJD3_k127_3371997_1 FAD linked - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 310.0
PJD3_k127_3371997_2 helix_turn_helix ASNC type - - - 0.00000000000000000000000000000000000000000000000000000000000000002533 225.0
PJD3_k127_3371997_3 DnaJ molecular chaperone homology domain K03686 - - 0.00000000000000000000000000000000000000000000000000000000002071 211.0
PJD3_k127_3371997_4 - - - - 0.00000000000000000000000000000000004367 138.0
PJD3_k127_3371997_5 - - - - 0.00000000000000000000000000004244 119.0
PJD3_k127_3476441_0 DnaJ molecular chaperone homology domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 574.0
PJD3_k127_3476441_1 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006775 381.0
PJD3_k127_3476441_2 Adenylate guanylate cyclase with integral membrane sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 367.0
PJD3_k127_3476441_3 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 357.0
PJD3_k127_3476441_4 Belongs to the LDH MDH superfamily K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 353.0
PJD3_k127_3476441_5 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005776 241.0
PJD3_k127_3476441_6 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000001073 194.0
PJD3_k127_3476441_7 transcriptional regulators - - - 0.000000000000000000000000000000000000002697 149.0
PJD3_k127_3493834_0 Belongs to the peptidase S8 family K14647 - - 2.494e-286 894.0
PJD3_k127_3493834_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 2.548e-279 865.0
PJD3_k127_3493834_10 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000004069 173.0
PJD3_k127_3493834_11 ribosomal protein K02912 - - 0.00000000000000000000000000000000000008195 146.0
PJD3_k127_3493834_12 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K07342 - - 0.000000000000000000000000000385 113.0
PJD3_k127_3493834_13 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000009521 66.0
PJD3_k127_3493834_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 469.0
PJD3_k127_3493834_3 D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo K09716 - 3.1.1.96 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 404.0
PJD3_k127_3493834_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 398.0
PJD3_k127_3493834_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001125 279.0
PJD3_k127_3493834_6 Transcription elongation factor Spt5 K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003357 274.0
PJD3_k127_3493834_7 Binds to the 23S rRNA K02885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001402 258.0
PJD3_k127_3493834_8 helix_turn_helix ASNC type K03718 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005815 254.0
PJD3_k127_3493834_9 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04797 - - 0.000000000000000000000000000000000000000000000000002547 184.0
PJD3_k127_3497930_0 AIPR protein - - - 1.529e-289 892.0
PJD3_k127_3497930_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 377.0
PJD3_k127_3497930_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 315.0
PJD3_k127_3497930_3 Winged helix-turn-helix - - - 0.00000000000000000000000000000000000000000001124 164.0
PJD3_k127_3497930_4 - - - - 0.00000000000000005537 81.0
PJD3_k127_3497930_5 - - - - 0.000000000000002824 77.0
PJD3_k127_3497930_6 - - - - 0.00000001106 59.0
PJD3_k127_3500972_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.639e-257 799.0
PJD3_k127_3500972_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K09759 - 6.1.1.23 2.289e-252 781.0
PJD3_k127_3500972_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 534.0
PJD3_k127_3500972_3 Catalyzes the ATP- and formate-dependent formylation of 5-aminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'- monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1- beta-d-ribofuranosyl 5'-monophosphate (FAICAR) in the absence of folates K06863 - 6.3.4.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 518.0
PJD3_k127_3500972_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000007458 143.0
PJD3_k127_3500972_5 - - - - 0.000000000000000000000009071 101.0
PJD3_k127_3520922_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 1.383e-259 804.0
PJD3_k127_3520922_1 DHHA1 domain K07463 - - 4.807e-249 772.0
PJD3_k127_3520922_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 1.084e-223 698.0
PJD3_k127_3520922_3 Belongs to the eukaryotic ribosomal protein eS1 family K02984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005566 374.0
PJD3_k127_3520922_4 RNA binding K07581 - - 0.00000000000000000000000000000000000000000000005672 173.0
PJD3_k127_3546945_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 4.521e-310 956.0
PJD3_k127_3546945_1 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008475 496.0
PJD3_k127_3546945_2 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 374.0
PJD3_k127_3546945_3 transcriptional regulators K03711,K09825 - - 0.00000000000000000000000000000000000000000000000000000000000000003314 225.0
PJD3_k127_3546945_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.000000000000000000000000000000000000000000000000000001013 199.0
PJD3_k127_3546945_5 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K20989 - - 0.00000000000000000000000000000000316 134.0
PJD3_k127_3546945_7 - - - - 0.0000000000000002177 80.0
PJD3_k127_3546945_8 Acetyltransferase (GNAT) family - - - 0.0000000000000003609 79.0
PJD3_k127_3622136_0 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005725 452.0
PJD3_k127_3622136_1 TPR repeat K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008523 260.0
PJD3_k127_3622136_2 - - - - 0.000000000000000000000000000000000000000000000000008963 186.0
PJD3_k127_3622136_3 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000005956 124.0
PJD3_k127_3659676_0 Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs K18779 - 2.4.2.48 1.598e-273 846.0
PJD3_k127_3659676_1 GTPase of unknown function C-terminal K06942 - - 8.203e-213 666.0
PJD3_k127_3659676_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37 K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 576.0
PJD3_k127_3659676_3 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 377.0
PJD3_k127_3659676_4 NADH ubiquinone oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000002085 226.0
PJD3_k127_3659676_5 Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates K18532 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000002122 199.0
PJD3_k127_3659676_6 - - - - 0.000000000000000000000000000000001292 130.0
PJD3_k127_3742802_0 Radical SAM K06937 - - 0.0 1149.0
PJD3_k127_3742802_1 Archaeal transcriptional regulator TrmB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007629 444.0
PJD3_k127_3742802_2 Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008521 413.0
PJD3_k127_3742802_3 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.000000000000005762 75.0
PJD3_k127_3744286_0 Phosphate uptake regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 589.0
PJD3_k127_3744286_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 533.0
PJD3_k127_3744286_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 319.0
PJD3_k127_3744286_3 Patch-forming domain C2 of tRNA-guanine transglycosylase K07398 - - 0.00000000000000000000000000000000000000000000000000000000000000000001215 236.0
PJD3_k127_3744286_4 Contacts the emerging nascent chain on the ribosome K03626 - - 0.000000000000000000000000000000000000000000000000000002049 192.0
PJD3_k127_3744286_5 - - - - 0.00000000000000000000000000000000000000000000003161 173.0
PJD3_k127_3744286_6 H subunit K02107 - - 0.000000000000000000000000000000000000000008306 156.0
PJD3_k127_3747995_0 small GTP-binding protein K06944 - - 8.539e-216 672.0
PJD3_k127_3747995_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 1.478e-203 638.0
PJD3_k127_3747995_2 Phosphoglycolate phosphatase K22223 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 354.0
PJD3_k127_3758341_0 Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6- hydroxymethyl-7,8-dihydropterin diphosphate (6-HMDP) K07142 - 2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 335.0
PJD3_k127_3758341_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002043 228.0
PJD3_k127_3758341_2 Pterin binding enzyme K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000001979 161.0
PJD3_k127_3763624_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000006123 233.0
PJD3_k127_3763624_2 - - - - 0.00000000000000000000000000000000000000002033 153.0
PJD3_k127_3763624_4 Arsenate reductase and related K00537 - 1.20.4.1 0.000000000000000000000000000000000000005782 147.0
PJD3_k127_3763624_5 - - - - 0.00000000000000000000000000000000009236 142.0
PJD3_k127_3763624_6 - - - - 0.0000000001189 66.0
PJD3_k127_377587_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 565.0
PJD3_k127_377587_1 COG1522 Transcriptional regulators - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 516.0
PJD3_k127_377587_2 Chlorite dismutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 286.0
PJD3_k127_377587_3 Siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000001523 233.0
PJD3_k127_377587_4 - - - - 0.00000000000000000000000000000000000000000008633 161.0
PJD3_k127_3780614_0 Uncharacterised protein family (UPF0182) K09118 - - 0.0 1615.0
PJD3_k127_3780614_1 Initiation factor K03242 - - 1.452e-242 752.0
PJD3_k127_3780614_10 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000003994 225.0
PJD3_k127_3780614_11 Belongs to the eukaryotic ribosomal protein eS6 family K02991 - - 0.00000000000000000000000000000000000000000000000000000000000001784 216.0
PJD3_k127_3780614_12 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000001402 181.0
PJD3_k127_3780614_13 - - - - 0.000000000000000000000000005388 110.0
PJD3_k127_3780614_14 more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA K11130 - - 0.000000000000000000000002205 104.0
PJD3_k127_3780614_2 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 5.605e-203 640.0
PJD3_k127_3780614_3 Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K02683 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 593.0
PJD3_k127_3780614_4 Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K18882 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003656 565.0
PJD3_k127_3780614_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009453 445.0
PJD3_k127_3780614_6 Translation initiation factor 2, alpha subunit K03237 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008967 436.0
PJD3_k127_3780614_7 Precorrin-8X methylmutase K06042 - 5.4.99.60,5.4.99.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000477 332.0
PJD3_k127_3780614_8 ATP corrinoid adenosyltransferase K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004819 291.0
PJD3_k127_3780614_9 glutamine amidotransferase K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000002671 245.0
PJD3_k127_3802945_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1638.0
PJD3_k127_3802945_1 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0 1162.0
PJD3_k127_3802945_2 Thiolase, N-terminal domain K00626 - 2.3.1.9 1.51e-226 703.0
PJD3_k127_3802945_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007193 526.0
PJD3_k127_3802945_4 nucleic-acid-binding protein containing a Zn-ribbon K07068 - - 0.00000000000000000000000000000000000000000001823 165.0
PJD3_k127_3802945_5 - - - - 0.000000000000000000000000002422 111.0
PJD3_k127_3817719_0 Phosphoglycerate kinase K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 575.0
PJD3_k127_3817719_1 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 336.0
PJD3_k127_3832741_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1165.0
PJD3_k127_3832741_1 Nitroreductase K19286 - 1.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 441.0
PJD3_k127_3832741_2 - K07043 - - 0.00000000000000000000000000000000000000000000000003294 179.0
PJD3_k127_3832741_3 Domain of unknown function (DUF2024) - - - 0.0000000000000000000000000000000000000000000000003749 175.0
PJD3_k127_3832741_4 Cyclophilin-like K09143 - - 0.000000000000000000000000000000000000000000000002771 176.0
PJD3_k127_3832741_5 metal-dependent protease of the PAD1 JAB1 superfamily K21140 - 3.13.1.6 0.000000000000000000000000000000000000000001143 160.0
PJD3_k127_3832741_6 - - - - 0.000000000000000000000000000114 115.0
PJD3_k127_3832741_7 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000001406 116.0
PJD3_k127_3843868_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K13798 - 2.7.7.6 0.0 2153.0
PJD3_k127_3843868_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03041 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 438.0
PJD3_k127_3843868_2 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000004832 210.0
PJD3_k127_3843868_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03053 - 2.7.7.6 0.000000000000000000000000000000000000000000000128 168.0
PJD3_k127_3931739_0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000009362 185.0
PJD3_k127_3931739_3 - - - - 0.0000000000005002 79.0
PJD3_k127_3931739_4 - - - - 0.000000004342 63.0
PJD3_k127_3942883_0 Mechanosensitive ion channel K05802 - - 2.886e-201 642.0
PJD3_k127_3942883_1 Sodium hydrogen exchanger - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 612.0
PJD3_k127_3942883_4 transcriptional - - - 0.0000000000000000008654 88.0
PJD3_k127_3942883_5 - - - - 0.0000000000000001031 85.0
PJD3_k127_3942883_6 - - - - 0.0000000000001542 72.0
PJD3_k127_3942883_7 - - - - 0.000000001356 59.0
PJD3_k127_4026268_0 Domain of unknown function (DUF309) K09763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008398 278.0
PJD3_k127_4026268_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001355 256.0
PJD3_k127_4026268_2 phosphoglycerate mutase K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000001241 186.0
PJD3_k127_4026268_3 Belongs to the eukaryotic ribosomal protein eS24 family K02974 - - 0.000000000000000000000000000000000000000000000002646 176.0
PJD3_k127_4026268_4 Universal stress protein - - - 0.000000000000000000000000000000000002784 141.0
PJD3_k127_4026268_5 - - - - 0.0000000000000000000000000000006083 125.0
PJD3_k127_4026268_6 Universal stress protein - - - 0.0000000000000000000000000000008753 126.0
PJD3_k127_4026268_7 - - - - 0.000000000000000000000000004803 110.0
PJD3_k127_4026268_8 CBS domain - - - 0.000000000000000000000001799 108.0
PJD3_k127_4026268_9 Belongs to the eukaryotic ribosomal protein eS31 family K02977 - - 0.00000000000000000000009891 98.0
PJD3_k127_4056939_0 MOFRL family K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009635 591.0
PJD3_k127_4056939_1 COG1522 Transcriptional regulators - - - 0.00000000000000000000002128 101.0
PJD3_k127_4135715_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 5.894e-321 986.0
PJD3_k127_4135715_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 557.0
PJD3_k127_4135715_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008196 334.0
PJD3_k127_4135715_3 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000002737 149.0
PJD3_k127_4141005_0 Protein of unknown function, DUF255 K06888 - - 0.0 1122.0
PJD3_k127_4141005_1 PFAM Alcohol dehydrogenase K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 364.0
PJD3_k127_4141005_2 - - - - 0.00000000000000000000000000000000000000000000000001471 181.0
PJD3_k127_4141005_3 - - - - 0.00000000000000000000000000000000000000000007492 161.0
PJD3_k127_4141005_4 - - - - 0.00000000000000000000000000000000007967 136.0
PJD3_k127_4141005_5 - - - - 0.00000000000000000000000001195 110.0
PJD3_k127_4182672_0 Chlorophyllase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004987 420.0
PJD3_k127_4182672_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 305.0
PJD3_k127_4182672_10 - - - - 0.000000000000000000000000000000002255 132.0
PJD3_k127_4182672_11 cheY-homologous receiver domain - - - 0.00000000000000000000008732 101.0
PJD3_k127_4182672_12 - - - - 0.000000000000000000001492 98.0
PJD3_k127_4182672_13 cheY-homologous receiver domain - - - 0.00000000000000000003385 94.0
PJD3_k127_4182672_14 - - - - 0.000000000001931 72.0
PJD3_k127_4182672_16 Histidine kinase - - - 0.00000002161 66.0
PJD3_k127_4182672_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001141 270.0
PJD3_k127_4182672_3 Functions by promoting the formation of the first peptide bond K03263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002182 257.0
PJD3_k127_4182672_4 Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.00000000000000000000000000000000000000000000000005466 182.0
PJD3_k127_4182672_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000001051 185.0
PJD3_k127_4182672_6 DoxX family K15977,K16937 - 1.8.5.2 0.0000000000000000000000000000000000000000000003952 169.0
PJD3_k127_4182672_7 Phage integrase family - - - 0.00000000000000000000000000000000000000000001781 168.0
PJD3_k127_4182672_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000003362 170.0
PJD3_k127_4182672_9 protein secretion by the type IV secretion system - - - 0.000000000000000000000000000000000005053 149.0
PJD3_k127_4197296_0 PFAM Cupin 2, conserved barrel domain protein K11312 - - 0.000000000000000000000000000000000000000001147 158.0
PJD3_k127_4197296_1 Universal stress protein family - - - 0.0000000000000000000000000000000000001204 146.0
PJD3_k127_4197296_2 COG3209 Rhs family protein - - - 0.0000000004621 74.0
PJD3_k127_4197296_3 HYR domain - - - 0.0000000006088 73.0
PJD3_k127_4197296_4 serine-type endopeptidase activity K20276 - - 0.00001245 59.0
PJD3_k127_4197645_0 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 558.0
PJD3_k127_4197645_1 - - - - 0.00000000000000000000000000000000000000000000000000000000006976 206.0
PJD3_k127_4197645_2 transcriptional - - - 0.00000000000000000000000000000000000000000000000000000006166 207.0
PJD3_k127_4197645_3 Histidine kinase K03406 - - 0.00000000000000000000000000000000000000000000000000000008082 204.0
PJD3_k127_4197645_4 cheY-homologous receiver domain - - - 0.00000000000000000000000000001112 122.0
PJD3_k127_420208_0 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 574.0
PJD3_k127_420208_1 Cytochrome b subunit of the bc complex K00412 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 544.0
PJD3_k127_420208_2 PFAM Copper binding proteins, plastocyanin azurin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005568 271.0
PJD3_k127_420208_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000004742 233.0
PJD3_k127_420208_4 Beta-Casp domain K07577 - - 0.0000000000000000000000000000000007399 137.0
PJD3_k127_4263896_0 FeS assembly protein SufB K09014 - - 7.778e-299 917.0
PJD3_k127_4263896_1 FeS assembly protein SufD K09014,K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 314.0
PJD3_k127_4263896_2 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.00000000000000000000000000000000000000005379 153.0
PJD3_k127_4263896_3 phosphorelay signal transduction system - - - 0.0000000000002715 74.0
PJD3_k127_4266856_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 - 2.7.7.7 0.0 1898.0
PJD3_k127_4266856_1 PFAM TCP-1 cpn60 chaperonin family K22447 - - 2e-323 996.0
PJD3_k127_4266856_10 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006599 504.0
PJD3_k127_4266856_11 RNA methylase K07446 GO:0000049,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004809,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363 2.1.1.213 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 461.0
PJD3_k127_4266856_12 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17104 - 2.5.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 436.0
PJD3_k127_4266856_13 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006146 433.0
PJD3_k127_4266856_14 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 407.0
PJD3_k127_4266856_15 N-formylglutamate amidohydrolase K01479 - 3.5.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004955 398.0
PJD3_k127_4266856_16 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 396.0
PJD3_k127_4266856_17 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 285.0
PJD3_k127_4266856_18 protein conserved in archaea K09723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002011 262.0
PJD3_k127_4266856_19 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008401 259.0
PJD3_k127_4266856_2 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 1.965e-316 969.0
PJD3_k127_4266856_20 - - - - 0.0000000000000000000000000000000000000000000000000000000001544 205.0
PJD3_k127_4266856_21 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000000000000000000000000000001111 206.0
PJD3_k127_4266856_22 - - - - 0.000000000000000000000000000000000000000000000000006451 181.0
PJD3_k127_4266856_23 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000002616 180.0
PJD3_k127_4266856_24 Belongs to the UPF0201 family K09736 - - 0.000000000000000000000000000000000000000000006475 166.0
PJD3_k127_4266856_25 Ser thr protein kinase K07176 - - 0.000000000000000000000000000000000000000003614 164.0
PJD3_k127_4266856_26 zinc finger - - - 0.000000000000000000000000000000007675 128.0
PJD3_k127_4266856_27 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 - - 0.000000000000000000000000001095 114.0
PJD3_k127_4266856_28 - - - - 0.000000000000000000000000007197 113.0
PJD3_k127_4266856_29 - K00960 - 2.7.7.6 0.000000000000000000000114 96.0
PJD3_k127_4266856_3 Mechanosensitive ion channel K05802 - - 1.062e-282 877.0
PJD3_k127_4266856_30 - - - - 0.0000000000000000000006317 96.0
PJD3_k127_4266856_31 TIGRFAM lysine 2,3-aminomutase YodO family protein - - - 0.0000000000000002711 79.0
PJD3_k127_4266856_32 - - - - 0.000003876 52.0
PJD3_k127_4266856_4 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 4.309e-273 847.0
PJD3_k127_4266856_5 Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 9.497e-271 835.0
PJD3_k127_4266856_6 ATP-grasp domain K01295,K01439,K01921,K16181 - 3.4.17.11,3.5.1.18,6.3.2.4 6.28e-254 802.0
PJD3_k127_4266856_7 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K07558 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 597.0
PJD3_k127_4266856_8 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 591.0
PJD3_k127_4266856_9 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 524.0
PJD3_k127_4295823_0 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.0 1017.0
PJD3_k127_4295823_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.268e-252 782.0
PJD3_k127_4295823_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002505 263.0
PJD3_k127_4295823_11 Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs K11131 - - 0.0000000000000000000000000000000000000000000000000000000000001284 213.0
PJD3_k127_4295823_12 - - - - 0.000000000000000000000000000000000000000000000000000001503 194.0
PJD3_k127_4295823_13 - - - - 0.00000000000000000000000000000000000000000000000000007157 187.0
PJD3_k127_4295823_14 - - - - 0.0000000000000000000000000000000000001288 143.0
PJD3_k127_4295823_15 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000001542 134.0
PJD3_k127_4295823_18 serine-type endopeptidase activity - - - 0.00000000000000000000009084 108.0
PJD3_k127_4295823_19 transcriptional - - - 0.000000000000005703 79.0
PJD3_k127_4295823_2 3-isopropylmalate dehydratase, large subunit K01703 - 4.2.1.33,4.2.1.35 1.549e-223 697.0
PJD3_k127_4295823_3 FAD dependent oxidoreductase K15736 - - 4.354e-222 694.0
PJD3_k127_4295823_4 D-isomer specific 2-hydroxyacid dehydrogenase K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 496.0
PJD3_k127_4295823_5 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 384.0
PJD3_k127_4295823_6 F420-0:Gamma-glutamyl ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 380.0
PJD3_k127_4295823_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 343.0
PJD3_k127_4295823_8 3-isopropylmalate dehydratase, small subunit K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 305.0
PJD3_k127_4295823_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006846 269.0
PJD3_k127_4310494_0 Thiamine biosynthesis protein ThiC K03147 - 4.1.99.17 5.699e-269 830.0
PJD3_k127_4310494_1 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 7.366e-204 637.0
PJD3_k127_4310494_2 Phosphomethylpyrimidine kinase K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008944 463.0
PJD3_k127_4310494_3 Nucleotidyl transferase K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009423 367.0
PJD3_k127_4310494_4 Acetyltransferase (GNAT) domain K00621 - 2.3.1.4 0.00000000000000000000000000000000000000000000000000000007307 198.0
PJD3_k127_4310494_5 - - - - 0.000000000000000000000000000000000000000001205 160.0
PJD3_k127_4310494_6 Mut7-C RNAse domain K09122 - - 0.0000000000000004533 79.0
PJD3_k127_4310494_7 Phosphomethylpyrimidine kinase K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000002604 52.0
PJD3_k127_4424950_0 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 571.0
PJD3_k127_4424950_1 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009417 566.0
PJD3_k127_4424950_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 494.0
PJD3_k127_4424950_3 phosphoribosylglycinamide formyltransferase K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008543 308.0
PJD3_k127_4424950_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000001009 217.0
PJD3_k127_4424950_5 5-formyltetrahydrofolate cyclo-ligase K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000000001515 194.0
PJD3_k127_4424950_6 Cupin domain - - - 0.0000000000000000000000000000000000000000000009395 167.0
PJD3_k127_4424950_7 Winged helix-turn-helix - - - 0.000000000000000000000000000000000000001292 149.0
PJD3_k127_4424950_8 - - - - 0.000000000000000000000000000000000000003062 146.0
PJD3_k127_4424950_9 Antibiotic biosynthesis monooxygenase K21481 - 1.14.99.57 0.00000000000000000000000008426 109.0
PJD3_k127_4428340_0 Fibronectin-binding protein A N-terminus (FbpA) - - - 1.631e-313 970.0
PJD3_k127_4428340_1 synthetase (class II) K01880 - 6.1.1.14 1.074e-286 883.0
PJD3_k127_4428340_10 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 409.0
PJD3_k127_4428340_11 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 396.0
PJD3_k127_4428340_12 conserved protein implicated in secretion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 385.0
PJD3_k127_4428340_13 Queuosine biosynthesis protein QueC K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 380.0
PJD3_k127_4428340_14 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003457 368.0
PJD3_k127_4428340_15 Phosphoadenosine phosphosulfate reductase family K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 367.0
PJD3_k127_4428340_16 GTP cyclohydrolase I K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 326.0
PJD3_k127_4428340_17 Catalyzes the methylation of C-15 in cobalt-precorrin-6B followed by the decarboxylation of C-12 to form cobalt-precorrin- 7 K02191 - 2.1.1.196 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 309.0
PJD3_k127_4428340_18 Asp/Glu/Hydantoin racemase K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001661 275.0
PJD3_k127_4428340_19 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004616 268.0
PJD3_k127_4428340_2 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 1.198e-221 690.0
PJD3_k127_4428340_20 AMMECR1 K09141 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008895 261.0
PJD3_k127_4428340_21 ribosomal small subunit binding - - - 0.000000000000000000000000000000000000000000000000000000000008171 211.0
PJD3_k127_4428340_22 - - - - 0.0000000000000000000000000000000000000000000000000000000002068 205.0
PJD3_k127_4428340_23 Protein of unknown function DUF126 K09128 - - 0.000000000000000000000000000000000000000000000000000005706 192.0
PJD3_k127_4428340_24 - - - - 0.000000000000000000000000000000000000000000006771 164.0
PJD3_k127_4428340_25 Precorrin-2 K03394 - 2.1.1.130,2.1.1.151 0.000000000000000000000000000000000000000001224 165.0
PJD3_k127_4428340_26 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000000000000000001761 160.0
PJD3_k127_4428340_27 - - - - 0.000000000000000000000000007291 110.0
PJD3_k127_4428340_28 - - - - 0.00000000000000000000003578 101.0
PJD3_k127_4428340_29 - - - - 0.0000000000000000000007692 107.0
PJD3_k127_4428340_3 Protein of unknown function (DUF521) K09123 - - 1.538e-208 652.0
PJD3_k127_4428340_4 Glycosyl transferase family 1 - - - 5.24e-208 653.0
PJD3_k127_4428340_5 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 511.0
PJD3_k127_4428340_6 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 490.0
PJD3_k127_4428340_7 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 468.0
PJD3_k127_4428340_8 Tetrapyrrole (Corrin/Porphyrin) Methylases K05936 - 2.1.1.133,2.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 436.0
PJD3_k127_4428340_9 Conserved hypothetical ATP binding protein K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 422.0
PJD3_k127_4451913_0 cation diffusion facilitator family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 370.0
PJD3_k127_4451913_1 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000003582 258.0
PJD3_k127_4451913_2 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.00005142 55.0
PJD3_k127_4454246_0 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.0 1091.0
PJD3_k127_4454246_1 Ammonium Transporter K03320 - - 0.0 1016.0
PJD3_k127_4454246_2 ATP synthase (C/AC39) subunit K02119 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000544 545.0
PJD3_k127_4454246_3 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 414.0
PJD3_k127_4454246_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 338.0
PJD3_k127_4454246_5 CRISPR-associated protein Cas4 K07464 - 3.1.12.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 328.0
PJD3_k127_4454246_6 - - - - 0.000000000000000000000000000000000000000001139 163.0
PJD3_k127_4454246_7 - - - - 0.0000000000000000000000006943 104.0
PJD3_k127_4454246_8 - - - - 0.0000000000000000005672 90.0
PJD3_k127_4466013_0 ATPase involved in DNA repair - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008381 392.0
PJD3_k127_4466013_1 metal-dependent protease of the PAD1 JAB1 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000002087 233.0
PJD3_k127_4466013_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000003281 195.0
PJD3_k127_4466013_3 - - - - 0.0000000000000000000000000000000004646 134.0
PJD3_k127_4466013_4 - - - - 0.0000000000000000000000004908 107.0
PJD3_k127_4480078_0 Methionine synthase K00548 - 2.1.1.13 0.0 1405.0
PJD3_k127_4480078_1 homocysteine S-methyltransferase K00548 - 2.1.1.13 2.594e-196 613.0
PJD3_k127_4480078_2 cytochrome-c peroxidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007119 362.0
PJD3_k127_4480078_3 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003489 267.0
PJD3_k127_4480078_4 Major facilitator superfamily K08153 - - 0.0000000000000000000000000000000000000000000000000006752 185.0
PJD3_k127_4480078_5 Belongs to the ribosomal protein L31e family K02910 - - 0.000000000000000000000000000000000000000000002604 166.0
PJD3_k127_4480078_6 Belongs to the eukaryotic ribosomal protein eL39 family K02924 - - 0.000000000000000000001637 94.0
PJD3_k127_4506145_0 PFAM aminotransferase class-III K01845 - 5.4.3.8 1.405e-198 622.0
PJD3_k127_4506145_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 479.0
PJD3_k127_4506145_2 Belongs to the precorrin methyltransferase family K02303 - 2.1.1.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 456.0
PJD3_k127_4506145_3 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 284.0
PJD3_k127_4522211_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007791 586.0
PJD3_k127_4522211_1 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005728 368.0
PJD3_k127_4522211_2 aspartate carbamoyltransferase K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000001903 213.0
PJD3_k127_4525040_0 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009403 363.0
PJD3_k127_4525040_1 Located on the platform of the 30S subunit K02948 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001337 268.0
PJD3_k127_4525040_10 - - - - 0.000000003939 58.0
PJD3_k127_4525040_2 PFAM Chromatin associated protein KTI12 K00860,K10837 - 2.7.1.164,2.7.1.25 0.0000000000000000000000000000000000000000000000002026 180.0
PJD3_k127_4525040_3 - - - - 0.000000000000000000000000000000000000000000003594 166.0
PJD3_k127_4525040_4 Belongs to the RtcB family K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000559 163.0
PJD3_k127_4525040_5 - - - - 0.00000000000000000000000000000000001939 137.0
PJD3_k127_4525040_6 - - - - 0.0000000000000000000001067 103.0
PJD3_k127_4525040_7 zinc finger - - - 0.000000000000000000005283 98.0
PJD3_k127_4525040_8 Belongs to the phosphohexose mutase family K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.000000000000000001299 92.0
PJD3_k127_4525040_9 - - - - 0.000000000000000075 84.0
PJD3_k127_4525444_0 COG1914 Mn2 and Fe2 transporters of the NRAMP family - - - 3.49e-199 628.0
PJD3_k127_4525444_1 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 312.0
PJD3_k127_4525444_11 Protein of unknown function (DUF1059) - - - 0.0000001593 55.0
PJD3_k127_4525444_2 PFAM Ferritin, Dps family protein K02217 - 1.16.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 295.0
PJD3_k127_4525444_3 - - - - 0.000000000000000000000000000000000000000000000000000000000001471 212.0
PJD3_k127_4525444_5 - - - - 0.0000000000000000000000000000000000009211 153.0
PJD3_k127_4525444_6 - - - - 0.000000000000000000000000000003289 134.0
PJD3_k127_4525444_7 - - - - 0.000000000000000000000000003987 111.0
PJD3_k127_4525444_8 - - - - 0.000000000000000001244 88.0
PJD3_k127_4525444_9 SnoaL-like polyketide cyclase - - - 0.00000000000000001277 95.0
PJD3_k127_4634625_0 fumarate reductase flavoprotein K00239 - 1.3.5.1,1.3.5.4 0.0 1059.0
PJD3_k127_4634625_1 argininosuccinate lyase K01755 - 4.3.2.1 5.525e-238 743.0
PJD3_k127_4634625_2 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 468.0
PJD3_k127_4634625_3 PFAM ParB domain protein nuclease K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 424.0
PJD3_k127_4634625_4 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 283.0
PJD3_k127_4634625_5 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000236 257.0
PJD3_k127_4634625_6 Iron-sulfur cluster assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000808 228.0
PJD3_k127_4634625_7 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.0000000000000000000000000000000000000000000000000000000004442 203.0
PJD3_k127_4634625_8 COG4618 ABC-type protease lipase transport system, ATPase and permease components - - - 0.000000000000000000000000000000000000000000001988 167.0
PJD3_k127_4634625_9 microtubule nucleation K10389 GO:0000003,GO:0000070,GO:0000086,GO:0000166,GO:0000212,GO:0000226,GO:0000228,GO:0000242,GO:0000278,GO:0000280,GO:0000793,GO:0000794,GO:0000819,GO:0000922,GO:0000930,GO:0000931,GO:0001882,GO:0001883,GO:0003002,GO:0003006,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005768,GO:0005813,GO:0005814,GO:0005815,GO:0005819,GO:0005827,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005881,GO:0005929,GO:0006810,GO:0006996,GO:0007010,GO:0007017,GO:0007020,GO:0007049,GO:0007051,GO:0007052,GO:0007056,GO:0007057,GO:0007059,GO:0007088,GO:0007097,GO:0007098,GO:0007127,GO:0007143,GO:0007144,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007310,GO:0007312,GO:0007346,GO:0007389,GO:0008150,GO:0008274,GO:0008275,GO:0008608,GO:0009266,GO:0009581,GO:0009582,GO:0009605,GO:0009628,GO:0009794,GO:0009798,GO:0009950,GO:0009953,GO:0009987,GO:0009994,GO:0010389,GO:0010457,GO:0010564,GO:0012505,GO:0015630,GO:0016043,GO:0016048,GO:0017076,GO:0019001,GO:0019953,GO:0021700,GO:0022402,GO:0022406,GO:0022412,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0031023,GO:0031109,GO:0031252,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032954,GO:0032991,GO:0033043,GO:0034622,GO:0035639,GO:0036064,GO:0036094,GO:0042802,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045132,GO:0045177,GO:0045995,GO:0046785,GO:0046907,GO:0048285,GO:0048468,GO:0048469,GO:0048477,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051179,GO:0051225,GO:0051234,GO:0051235,GO:0051239,GO:0051258,GO:0051276,GO:0051302,GO:0051304,GO:0051306,GO:0051316,GO:0051321,GO:0051606,GO:0051640,GO:0051641,GO:0051642,GO:0051647,GO:0051649,GO:0051651,GO:0051656,GO:0051657,GO:0051661,GO:0051663,GO:0051704,GO:0051726,GO:0051783,GO:0055037,GO:0060271,GO:0061842,GO:0061982,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070925,GO:0071840,GO:0072687,GO:0090306,GO:0097159,GO:0097367,GO:0097435,GO:0097708,GO:0097711,GO:0097730,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140013,GO:0140014,GO:0140056,GO:1901265,GO:1901363,GO:1901987,GO:1901990,GO:1902412,GO:1902749,GO:1902850,GO:1903046,GO:1903047,GO:1903436,GO:2000026 - 0.000000000004836 78.0
PJD3_k127_4635220_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 516.0
PJD3_k127_4635220_1 - - - - 0.000000000000000000000000000000000000000000009548 169.0
PJD3_k127_4635220_2 - - - - 0.000000000000000000000000000000000000006536 146.0
PJD3_k127_4635220_3 - - - - 0.0000000000000000000000005365 105.0
PJD3_k127_4649610_0 LOR SDH bifunctional - - - 8.434e-201 631.0
PJD3_k127_4649610_1 HD domain K07023 - - 0.000000000000000000000000000000000000000000000000000002214 197.0
PJD3_k127_4649610_2 - - - - 0.000000000000000000000000000000000000000000000000001377 184.0
PJD3_k127_4649610_3 - - - - 0.00000000000000000000000000000000000001866 146.0
PJD3_k127_4649610_4 - - - - 0.00000000000000000000001366 102.0
PJD3_k127_4649610_5 KaiC K08482 - - 0.000000000000000003686 87.0
PJD3_k127_4669705_0 Belongs to the peptidase M24B family K01262,K01271 - 3.4.11.9,3.4.13.9 1.777e-220 687.0
PJD3_k127_4669705_1 Thiamine biosynthesis protein (ThiI) - - - 2.001e-209 653.0
PJD3_k127_4669705_2 Nodulation protein S (NodS) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002799 273.0
PJD3_k127_4669705_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001111 273.0
PJD3_k127_4674303_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 1.23e-217 680.0
PJD3_k127_4674303_1 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008888 560.0
PJD3_k127_4674303_2 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006475 351.0
PJD3_k127_4674303_3 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 302.0
PJD3_k127_4674303_4 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.00000000000000000000000000000000000000000000001617 172.0
PJD3_k127_4674303_5 - - - - 0.000000000000000000000000000000000000000000004677 166.0
PJD3_k127_467687_0 Peptidase family M1 domain K01256,K13722 - 3.4.11.2 0.0 1381.0
PJD3_k127_467687_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 608.0
PJD3_k127_467687_2 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006143 264.0
PJD3_k127_4677577_0 DEAD DEAH box helicase K06877 - - 0.0 1431.0
PJD3_k127_4677577_1 DNA Topoisomerase I (eukaryota) K03163 - 5.99.1.2 5.224e-307 946.0
PJD3_k127_4677577_2 major facilitator superfamily K08153,K08221 - - 4.483e-206 646.0
PJD3_k127_4677577_3 DNA methylase K00571,K00590 - 2.1.1.113,2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 473.0
PJD3_k127_4677577_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 453.0
PJD3_k127_4677577_5 mttA/Hcf106 family K03116 - - 0.00000000000000000000000000000000000000005581 154.0
PJD3_k127_4677577_6 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000001647 114.0
PJD3_k127_4677577_7 sister chromatid segregation - - - 0.000000002111 65.0
PJD3_k127_4693180_0 Succinyl-CoA ligase like flavodoxin domain K18593 - - 0.0 1262.0
PJD3_k127_4693180_1 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 520.0
PJD3_k127_4693180_2 Vinylacetyl-CoA Delta-isomerase K14534 - 4.2.1.120,5.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000002759 260.0
PJD3_k127_4693180_3 - - - - 0.000000000000000000000000000000000000000000000000000000000003138 211.0
PJD3_k127_4693180_4 - - - - 0.000000000000000000000000000000000000000000000000000001098 195.0
PJD3_k127_4693180_5 Bacterial regulatory protein, arsR family - - - 0.00000000000000000000000000000000000000000000002463 171.0
PJD3_k127_4693180_6 - - - - 0.00000000000000000000000000000000000000046 149.0
PJD3_k127_4693180_7 - - - - 0.000000000000000000000000000000003275 129.0
PJD3_k127_4693180_8 Reverse transcriptase-like K03469 - 3.1.26.4 0.0000007504 55.0
PJD3_k127_471540_0 Cobalamin B12-binding domain protein K16955,K22491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 387.0
PJD3_k127_471540_1 - - - - 0.00000000000000000000000000000000000000000000000000000000005673 208.0
PJD3_k127_471540_2 - - - - 0.0000000000000000000000000000000000000000000000006257 178.0
PJD3_k127_471611_0 MGS-like domain K01955 - 6.3.5.5 7.145e-244 756.0
PJD3_k127_471611_1 Glucose dehydrogenase C-terminus K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 591.0
PJD3_k127_471611_2 Calcineurin-like phosphoesterase K06953 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 383.0
PJD3_k127_471611_3 ATP synthase (F/14-kDa) subunit K02122 - - 0.000000000000000000000000000000000000000000004607 164.0
PJD3_k127_471611_4 - - - - 0.00000000000000000000000000000000000000000007723 161.0
PJD3_k127_471611_5 - - - - 0.000000000000000000000000000000000000000003122 156.0
PJD3_k127_471611_6 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.000000000000000000000000000000000704 132.0
PJD3_k127_471611_7 - - - - 0.0000000000000000000001645 98.0
PJD3_k127_4720051_0 Lamin Tail Domain - - - 0.0 1204.0
PJD3_k127_4720051_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0 1203.0
PJD3_k127_4720051_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 306.0
PJD3_k127_4720051_11 Ribosome biogenesis protein, C-terminal K09140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005371 263.0
PJD3_k127_4720051_12 Guanylyl transferase CofC like K14941 - 2.7.7.68 0.00000000000000000000000000000000000000000000000000000000000000000000002208 244.0
PJD3_k127_4720051_13 Belongs to the SUI1 family K03113 - - 0.00000000000000000000000000000000000000000000000000000003914 196.0
PJD3_k127_4720051_14 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) K07143 - - 0.0000000000000000000000000000000000000000003311 159.0
PJD3_k127_4720051_15 Protein of unknown function DUF99 K09120 - - 0.0000000000000000000000000000000000000006941 150.0
PJD3_k127_4720051_16 4 iron, 4 sulfur cluster binding - - - 0.0000000000000000000000000008584 113.0
PJD3_k127_4720051_17 - - - - 0.0000000000000000000000001832 107.0
PJD3_k127_4720051_18 Sec61beta family - - - 0.0000000000000000000002126 96.0
PJD3_k127_4720051_19 Guanylyl transferase CofC like K14941 - 2.7.7.68 0.0000000000006818 69.0
PJD3_k127_4720051_2 Predicted membrane protein (DUF2070) K08979 - - 2.015e-292 905.0
PJD3_k127_4720051_21 - - - - 0.000001029 52.0
PJD3_k127_4720051_3 - - - - 3.53e-210 661.0
PJD3_k127_4720051_4 geranylgeranyl reductase K17830 - 1.3.1.101,1.3.7.11 1.331e-201 634.0
PJD3_k127_4720051_5 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009205 592.0
PJD3_k127_4720051_6 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 586.0
PJD3_k127_4720051_7 Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 531.0
PJD3_k127_4720051_8 CAAX protease self-immunity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 335.0
PJD3_k127_4720051_9 Protein of unknown function (DUF1698) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 318.0
PJD3_k127_4727650_0 sister chromatid segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005403 287.0
PJD3_k127_4727650_1 Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits K03236 - - 0.00000000000000000000000000000000000000000000000000000001412 199.0
PJD3_k127_4727650_2 - - - - 0.0000000000000000000000000000000000000002965 149.0
PJD3_k127_4727650_3 - - - - 0.0000000000000003546 79.0
PJD3_k127_4727650_5 Transcriptional regulator - - - 0.0000000001998 61.0
PJD3_k127_4762675_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.0 1289.0
PJD3_k127_4762675_1 COG1252 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 3.265e-225 704.0
PJD3_k127_4762675_10 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000000000000000000000000000000000000000000001677 201.0
PJD3_k127_4762675_11 - - - - 0.00000000000000000000000000000000005174 134.0
PJD3_k127_4762675_12 carbon-nitrogen ligase activity, with glutamine as amido-N-donor - - - 0.00000000000000000000000000384 115.0
PJD3_k127_4762675_13 small metal-binding protein - - - 0.00000000000000000000003633 99.0
PJD3_k127_4762675_14 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000002194 59.0
PJD3_k127_4762675_2 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 4.56e-204 646.0
PJD3_k127_4762675_3 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006839 499.0
PJD3_k127_4762675_4 TIGRFAM precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K03399 - 2.1.1.289 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556 406.0
PJD3_k127_4762675_5 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005387 389.0
PJD3_k127_4762675_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005793 355.0
PJD3_k127_4762675_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000742 263.0
PJD3_k127_4762675_8 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004062 260.0
PJD3_k127_4762675_9 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000006989 212.0
PJD3_k127_477002_0 ATP phosphoribosyltransferase K00765 - 2.4.2.17 2.861e-195 611.0
PJD3_k127_477002_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 602.0
PJD3_k127_477002_2 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 579.0
PJD3_k127_477002_3 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 572.0
PJD3_k127_477002_4 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 444.0
PJD3_k127_477002_5 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 329.0
PJD3_k127_4799423_0 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005475 457.0
PJD3_k127_4799423_1 - - - - 0.00000000005126 66.0
PJD3_k127_4799423_2 - - - - 0.0000001825 58.0
PJD3_k127_480224_0 Radical SAM - - - 0.0 1136.0
PJD3_k127_480224_1 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 - - 7.459e-205 640.0
PJD3_k127_480224_2 NOSIC (NUC001) domain K14564 - - 6.618e-194 614.0
PJD3_k127_480224_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family K00555 - 2.1.1.215,2.1.1.216 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007363 587.0
PJD3_k127_480224_4 Catalyzes the conversion of dihydroorotate to orotate K00226,K00254,K17723,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.1,1.3.1.14,1.3.5.2,1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 542.0
PJD3_k127_480224_5 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K02823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 414.0
PJD3_k127_480224_6 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008528 328.0
PJD3_k127_480224_7 Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA K04795 GO:0000154,GO:0000494,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006325,GO:0006364,GO:0006396,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008213,GO:0008276,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016074,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0022613,GO:0031123,GO:0031126,GO:0031167,GO:0032259,GO:0033967,GO:0034470,GO:0034641,GO:0034660,GO:0034963,GO:0036009,GO:0036211,GO:0042054,GO:0042254,GO:0043144,GO:0043170,GO:0043412,GO:0043414,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046483,GO:0051276,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140096,GO:0140098,GO:0140102,GO:1901360,GO:1901363,GO:1901564,GO:1990258,GO:1990259 - 0.000000000000000000000000000000000000000000000000000000000000000111 232.0
PJD3_k127_480224_8 Ribosomal protein S30 K02983 - - 0.00000000000000000000000000001303 117.0
PJD3_k127_48060_0 cytochrome c biogenesis protein K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000974 416.0
PJD3_k127_48060_1 TIGRFAM phenazine biosynthesis protein PhzF family K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000003 268.0
PJD3_k127_48060_10 Cytochrome C oxidase, subunit II K00376,K02275 - 1.7.2.4,1.9.3.1 0.0000000000000000000001271 104.0
PJD3_k127_48060_11 YHS domain - - - 0.0000000000000009529 77.0
PJD3_k127_48060_12 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0000000000001056 72.0
PJD3_k127_48060_13 TPR Domain containing protein - - - 0.0000000004952 65.0
PJD3_k127_48060_14 - - - - 0.00000002905 65.0
PJD3_k127_48060_15 - - - - 0.00000005854 55.0
PJD3_k127_48060_17 Copper binding proteins, plastocyanin/azurin family - - - 0.00009113 54.0
PJD3_k127_48060_2 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000002158 220.0
PJD3_k127_48060_3 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000000000000000001553 213.0
PJD3_k127_48060_4 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000000000000000001204 216.0
PJD3_k127_48060_5 - - - - 0.00000000000000000000000000000000000000000000000000001929 193.0
PJD3_k127_48060_6 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000006646 199.0
PJD3_k127_48060_7 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000000000000000000000000000000000003534 139.0
PJD3_k127_48060_8 TIGRFAM Glutaredoxin-like domain protein - - - 0.00000000000000000000000001057 110.0
PJD3_k127_48060_9 Beta-lactamase K17836 - 3.5.2.6 0.000000000000000000000003034 119.0
PJD3_k127_4812054_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 3.544e-202 630.0
PJD3_k127_4812054_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 368.0
PJD3_k127_4812054_2 aspartate carbamoyltransferase K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 317.0
PJD3_k127_4812054_3 Involved in allosteric regulation of aspartate carbamoyltransferase K00610 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005703 286.0
PJD3_k127_4812054_4 ATP synthase subunit C K02110,K02124 - - 0.0000000000000000000000000000000001178 134.0
PJD3_k127_4820461_0 RNA-metabolising metallo-beta-lactamase K07041 - - 0.0 1226.0
PJD3_k127_4820461_1 Aminotransferase class-V - - - 1.517e-229 713.0
PJD3_k127_4820461_10 peptidyl-prolyl cis-trans isomerase K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 286.0
PJD3_k127_4820461_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000452 253.0
PJD3_k127_4820461_12 Cytidylyltransferase-like K00952 - 2.7.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000008534 239.0
PJD3_k127_4820461_13 - - - - 0.00000000000000000000000000000000000000000000000000000000006789 207.0
PJD3_k127_4820461_14 - - - - 0.000000000000000000000000000000000000000000000000000000001821 204.0
PJD3_k127_4820461_15 - - - - 0.0000000000000000000000000000000000000000000000000000602 191.0
PJD3_k127_4820461_16 - - - - 0.000000000000000000000000000000000000000003212 159.0
PJD3_k127_4820461_17 - - - - 0.0000000000000000000000000000000004018 131.0
PJD3_k127_4820461_18 IMP dehydrogenase activity - - - 0.0000000000000000000000000001037 114.0
PJD3_k127_4820461_19 - - - - 0.000000000000000000000000001285 112.0
PJD3_k127_4820461_2 Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea K00096 - 1.1.1.261 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 578.0
PJD3_k127_4820461_20 Domain of unknown function (DUF4149) - - - 0.00008576 51.0
PJD3_k127_4820461_3 Thiamine biosynthesis protein (ThiI) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 577.0
PJD3_k127_4820461_4 Belongs to the peptidase M24B family K01262,K01271 - 3.4.11.9,3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 469.0
PJD3_k127_4820461_5 Cob(II)yrinic acid a,c-diamide reductase K04719 - 1.13.11.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 424.0
PJD3_k127_4820461_6 Peptidyl-prolyl cis-trans K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000541 418.0
PJD3_k127_4820461_7 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006027 421.0
PJD3_k127_4820461_8 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009485 404.0
PJD3_k127_4820461_9 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007965 366.0
PJD3_k127_4843571_0 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 0.0 1037.0
PJD3_k127_4843571_1 acetolactate synthase, small K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005251 294.0
PJD3_k127_4843571_2 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000291 220.0
PJD3_k127_4843571_3 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.000000000000000000000000000000000000000000000000000000000000003125 222.0
PJD3_k127_4845243_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 554.0
PJD3_k127_4845243_1 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007765 422.0
PJD3_k127_4845243_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center K02992 - - 0.000000000000000000000000000000000000000000000000000002061 191.0
PJD3_k127_4845243_3 - - - - 0.00000000000000000000000000000000000000000000000000008499 187.0
PJD3_k127_4845243_4 - - - - 0.000000000000000000166 102.0
PJD3_k127_4851593_0 Sodium hydrogen exchanger K11105 - - 7.979e-220 689.0
PJD3_k127_4851593_1 Inositol monophosphatase K01082,K01092 - 3.1.3.25,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000854 453.0
PJD3_k127_4851593_2 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 385.0
PJD3_k127_4851593_3 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 288.0
PJD3_k127_4851593_4 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.0000000000000000000000000000000000002097 147.0
PJD3_k127_4851593_5 - - - - 0.00000000000000000000000000000000223 131.0
PJD3_k127_4851593_6 - - - - 0.00000000000000000000000000000403 120.0
PJD3_k127_4860789_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 1.103e-284 877.0
PJD3_k127_4860789_1 TIGRFAM lysine 2,3-aminomutase YodO family protein - - - 7.217e-236 732.0
PJD3_k127_4860789_2 - - - - 0.00000000000000000000000000000000000000000000002403 173.0
PJD3_k127_4932866_0 Radical SAM K11780 - 2.5.1.77 3.302e-202 634.0
PJD3_k127_4932866_1 PFAM Glycosyl transferase family 2 K07011,K11936 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 600.0
PJD3_k127_4932866_2 Trypsin-like serine protease with C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 591.0
PJD3_k127_4932866_3 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 328.0
PJD3_k127_4932866_4 Radical SAM K11781 - 2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 315.0
PJD3_k127_4932866_5 Putative tRNA binding domain K06878 - - 0.00000000000000000000000000000000000000000000000000000001706 198.0
PJD3_k127_4932866_6 PFAM Polyketide cyclase dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000004747 195.0
PJD3_k127_4942340_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03041 - 2.7.7.6 0.0 1887.0
PJD3_k127_4942340_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 497.0
PJD3_k127_4942340_2 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001186 247.0
PJD3_k127_4942340_3 Like-Sm ribonucleoprotein core K04796 GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000000000000000002805 109.0
PJD3_k127_4958071_0 - - - - 1.847e-279 867.0
PJD3_k127_4958071_1 - - - - 1.855e-223 703.0
PJD3_k127_4958071_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 582.0
PJD3_k127_4958071_3 serine-type endopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005135 364.0
PJD3_k127_4958071_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003043 268.0
PJD3_k127_4958071_5 - - - - 0.000000000000000000000000000000000004316 137.0
PJD3_k127_4958071_7 PFAM blue (type 1) copper domain protein - - - 0.0000000000000004844 79.0
PJD3_k127_5034941_0 Vinylacetyl-CoA Delta-isomerase K14534 - 4.2.1.120,5.3.3.3 2.432e-235 728.0
PJD3_k127_5034941_1 Zinc finger domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 364.0
PJD3_k127_5034941_2 Signal peptidase K13280 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008326 298.0
PJD3_k127_5034941_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007524 272.0
PJD3_k127_5034941_4 Thioredoxin K03671 - - 0.0000000000000000000000000000000000000000000000000000000000000944 213.0
PJD3_k127_5034941_5 zinc-ribbon domain - - - 0.0000000000000000000000000000000000000000000000000000000000006119 211.0
PJD3_k127_5034941_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03406 - - 0.0000000000000000000000000000000000000000000571 179.0
PJD3_k127_5034941_7 cheY-homologous receiver domain - - - 0.000000000000000000000004867 105.0
PJD3_k127_5067442_0 ABC 3 transport family K09816 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000726 439.0
PJD3_k127_5067442_1 PFAM ABC transporter K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 426.0
PJD3_k127_5067442_2 Ribbon-helix-helix protein, copG family K07722 - - 0.00000000000000000000000000000000000000000000000000000000000000000002861 233.0
PJD3_k127_5067442_3 Periplasmic solute binding protein K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000244 228.0
PJD3_k127_5067442_4 resistance protein K14166 - - 0.0000000000000000000000000000000000000000000000005226 178.0
PJD3_k127_5097854_0 Glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 560.0
PJD3_k127_5097854_1 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 500.0
PJD3_k127_5097854_2 Uracil-DNA glycosylase K21929 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 351.0
PJD3_k127_5097854_3 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006473 287.0
PJD3_k127_5097854_4 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000646 231.0
PJD3_k127_5097854_5 sister chromatid segregation - - - 0.000000000000000000000000000000000000000004079 166.0
PJD3_k127_5140847_0 ABC1 family - - - 3.189e-247 771.0
PJD3_k127_5140847_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 2.584e-225 702.0
PJD3_k127_5140847_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 409.0
PJD3_k127_5140847_3 thymidylate kinase K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 303.0
PJD3_k127_5140847_4 - - - - 0.0000000000000000000000000000000000000000000000000000001415 196.0
PJD3_k127_5140847_5 Belongs to the small heat shock protein (HSP20) family - - - 0.000000000000000000000000000000000000000000001825 167.0
PJD3_k127_5140847_6 - - - - 0.0000000000000000000575 90.0
PJD3_k127_5160994_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00150 - 1.2.1.59 2.133e-195 612.0
PJD3_k127_5160994_1 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002391 222.0
PJD3_k127_5160994_2 xylanase chitin deacetylase K22278 - 3.5.1.104 0.00000000000000000000000000000000000000001741 174.0
PJD3_k127_5160994_3 - - - - 0.0000000000000000000000000871 124.0
PJD3_k127_5160994_4 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis - - - 0.00000000000000000000001143 105.0
PJD3_k127_520130_0 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008431 510.0
PJD3_k127_520130_1 - - - - 0.000000000000000000000000000000000000000000000000000000000006344 209.0
PJD3_k127_520130_2 Transcription elongation factor - - - 0.00000000000000000000000000000000000000000000000004382 179.0
PJD3_k127_520130_3 SNARE associated Golgi protein - - - 0.00000000000000000000000694 102.0
PJD3_k127_520130_4 - - - - 0.00000000000000000000007063 100.0
PJD3_k127_5201925_0 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412 472.0
PJD3_k127_5201925_1 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 372.0
PJD3_k127_5201925_2 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000462 257.0
PJD3_k127_5201925_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001904 246.0
PJD3_k127_5201925_4 - - - - 0.000000000000000000000000000000001137 142.0
PJD3_k127_5201925_5 - - - - 0.0000000000000000000000000003268 121.0
PJD3_k127_528928_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 1.857e-198 625.0
PJD3_k127_528928_1 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 576.0
PJD3_k127_528928_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 306.0
PJD3_k127_528928_3 - - - - 0.00000000000000000002708 96.0
PJD3_k127_528928_4 - - - - 0.0004317 43.0
PJD3_k127_5291112_0 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 314.0
PJD3_k127_5291112_1 Fungalysin metallopeptidase (M36) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 310.0
PJD3_k127_5291112_2 Pyruvate phosphate dikinase K01006 - 2.7.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004398 271.0
PJD3_k127_5291112_3 Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000008912 249.0
PJD3_k127_5291112_4 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000000000000000000000000002326 204.0
PJD3_k127_5291112_5 - - - - 0.000000000000000000000000000000000000002267 149.0
PJD3_k127_5291112_6 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000002105 76.0
PJD3_k127_5291112_7 COG3325 Chitinase K01183 - 3.2.1.14 0.0000000006818 72.0
PJD3_k127_5314578_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 500.0
PJD3_k127_5314578_1 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008637 306.0
PJD3_k127_5314578_2 Pterin binding enzyme K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000002779 244.0
PJD3_k127_5314578_3 - - - - 0.00000000000000000000000000000000000000000000000158 178.0
PJD3_k127_5378764_0 aspartate ornithine carbamoyltransferase carbamoyl-P binding domain K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 488.0
PJD3_k127_5378764_1 Belongs to the universal ribosomal protein uS5 family K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 391.0
PJD3_k127_5378764_2 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006182 282.0
PJD3_k127_5378764_3 ribosomal protein K02907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001097 270.0
PJD3_k127_5378764_4 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000000000000000000000001279 234.0
PJD3_k127_5378764_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000001774 124.0
PJD3_k127_5459207_0 Catalyzes the oxidative deamination and cyclization of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid (ADH) to yield 3- dehydroquinate (DHQ), which is fed into the canonical shikimic pathway of aromatic amino acid biosynthesis K11646 - 1.4.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 607.0
PJD3_k127_5459207_1 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K16306 - 2.2.1.10,4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005475 436.0
PJD3_k127_5459207_2 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 339.0
PJD3_k127_5459207_3 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003713 262.0
PJD3_k127_5459207_4 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000004887 81.0
PJD3_k127_5469404_0 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 400.0
PJD3_k127_5469404_1 Transcriptional regulator K07108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003106 263.0
PJD3_k127_5469404_2 Histidine kinase K03406 - - 0.0000000000000000000000000000004349 124.0
PJD3_k127_5469404_3 Alba K03622 - - 0.0000000000000000000000000002584 116.0
PJD3_k127_5469404_4 YHS domain - - - 0.0000000000000000002075 88.0
PJD3_k127_547220_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 383.0
PJD3_k127_547220_1 - - - - 0.0000000000000000000005676 98.0
PJD3_k127_547220_3 - - - - 0.00000001718 57.0
PJD3_k127_5504603_0 Isocitrate isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 323.0
PJD3_k127_5504603_1 Protein of unknown function (DUF655) K07572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 321.0
PJD3_k127_5504603_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 301.0
PJD3_k127_5504603_3 RNA polymerase Rpb4 K03051 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000007253 190.0
PJD3_k127_5504603_4 Belongs to the eukaryotic ribosomal protein eL21 family K02889 - - 0.0000000000000000000000000000000000000000000000000005143 184.0
PJD3_k127_5504603_5 RNA methylase - - - 0.00000000000000000000000000000000005871 135.0
PJD3_k127_5504603_6 Lysine methyltransferase K02493 - 2.1.1.297 0.000000000000000000001716 100.0
PJD3_k127_5504603_7 - - - - 0.000000000001218 74.0
PJD3_k127_5520445_0 DNA primase K02316 - - 1.314e-201 631.0
PJD3_k127_5520445_1 diphthine synthase K20215 - 2.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 592.0
PJD3_k127_5520445_2 Catalyzes the release of L-lysine from LysW -gamma-L- lysine and the release of L-ornithine from LysW -L-ornithine K05831 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009402 521.0
PJD3_k127_5520445_3 Domain of unknown function DUF120 K07732 - 2.7.1.161 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 347.0
PJD3_k127_5520445_4 Cytidylyltransferase-like K00980,K14656 - 2.7.7.2,2.7.7.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000001535 264.0
PJD3_k127_555824_0 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 418.0
PJD3_k127_555824_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 343.0
PJD3_k127_555824_2 Domain of unknown function (DUF1297) K06863 - 6.3.4.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007379 271.0
PJD3_k127_555824_3 - - - - 0.000000000000000000000000000000000004556 142.0
PJD3_k127_555824_4 mttA/Hcf106 family K03116 - - 0.000000000000000000000003176 103.0
PJD3_k127_5577981_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01870 - 6.1.1.5 0.0 1433.0
PJD3_k127_5577981_1 Belongs to the peptidase S8 family K01342 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005576,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030193,GO:0030195,GO:0032101,GO:0032102,GO:0042730,GO:0043170,GO:0044238,GO:0048519,GO:0048583,GO:0048585,GO:0050789,GO:0050818,GO:0050819,GO:0050878,GO:0051239,GO:0051241,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070011,GO:0071704,GO:0080134,GO:0140096,GO:1900046,GO:1900047,GO:1901564,GO:1903034,GO:1903035 3.4.21.62 0.0000005674 56.0
PJD3_k127_5603184_0 Peptidase family M50 - - - 5.882e-206 646.0
PJD3_k127_5603184_1 May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity K06965 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 551.0
PJD3_k127_5603184_2 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000129 243.0
PJD3_k127_5603184_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000004938 237.0
PJD3_k127_5603184_4 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.0000000000000000000000000000000000000000000000000000000000005179 211.0
PJD3_k127_5603184_5 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.000000000000000000000000000000000000000008776 156.0
PJD3_k127_5603184_6 - - - - 0.00000000000000000000000001563 109.0
PJD3_k127_5662129_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.908e-309 950.0
PJD3_k127_5662129_1 TCP-1/cpn60 chaperonin family K22447 - - 1.429e-300 925.0
PJD3_k127_5662129_10 Lrp/AsnC ligand binding domain K03718 - - 0.00000000000000000000000000000000000000000000000000000000000000000294 228.0
PJD3_k127_5662129_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000005372 215.0
PJD3_k127_5662129_12 - - - - 0.000000000000000000000000000000000000000000000000000001449 193.0
PJD3_k127_5662129_13 Binds to the 23S rRNA K02929 - - 0.00000000000000000000000000000000000000000000000001587 180.0
PJD3_k127_5662129_14 Domain of unknown function (DUF2024) - - - 0.00000000000000000000000000000000000000006565 152.0
PJD3_k127_5662129_15 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000000000234 111.0
PJD3_k127_5662129_16 - - - - 0.0000000000000000000001576 98.0
PJD3_k127_5662129_17 PFAM ribosomal protein K02978 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000001555 66.0
PJD3_k127_5662129_18 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.00001909 53.0
PJD3_k127_5662129_2 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 2.621e-296 917.0
PJD3_k127_5662129_3 aspartate-semialdehyde dehydrogenase K00133 - 1.2.1.11 2.709e-214 667.0
PJD3_k127_5662129_4 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 552.0
PJD3_k127_5662129_5 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009347 453.0
PJD3_k127_5662129_6 ROK family K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 448.0
PJD3_k127_5662129_7 PFAM Aminotransferase class I and II K04720 - 4.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004144 441.0
PJD3_k127_5662129_8 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 401.0
PJD3_k127_5662129_9 MobA-like NTP transferase domain K19712 - 2.7.7.62 0.0000000000000000000000000000000000000000000000000000000000000000000001961 244.0
PJD3_k127_5679512_0 Major Intrinsic Protein K06188,K09866 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 411.0
PJD3_k127_5679512_1 transcriptional - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 367.0
PJD3_k127_5679512_2 - - - - 0.0000000000000000000000004835 113.0
PJD3_k127_5733183_0 Cell division protein 48 (CDC48) domain 2 K13525 - - 0.0 1308.0
PJD3_k127_5733183_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000798 492.0
PJD3_k127_5733183_2 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 350.0
PJD3_k127_5733183_3 - - - - 0.000000000000000000000000000000000000001919 148.0
PJD3_k127_5733183_4 Promotes the exchange of GDP for GTP in EF-1-alpha GDP, thus allowing the regeneration of EF-1-alpha GTP that could then be used to form the ternary complex EF-1-alpha GTP AAtRNA K03232 - - 0.0000000000000000000000000000000000001369 142.0
PJD3_k127_5733183_5 Zn-ribbon RNA-binding protein with a function in translation K07580 - - 0.000000000000000000000000000000000004003 136.0
PJD3_k127_5733183_6 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.0000000000000000000000000000000007973 131.0
PJD3_k127_5749509_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412,K03413 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000004447 148.0
PJD3_k127_5749509_1 Required for chromosome condensation and partitioning - - - 0.0000000000000000000000002838 117.0
PJD3_k127_5749509_2 - - - - 0.000000000000000000000001436 106.0
PJD3_k127_5761379_0 ATPase associated with various cellular activities, AAA_5 K03924,K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 458.0
PJD3_k127_5761379_1 transcriptional - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 322.0
PJD3_k127_5761379_2 KaiC K08482 - - 0.000000000000000000000000000000000000000000000001409 180.0
PJD3_k127_5761379_3 Archaeal flagellar protein F K07329 - - 0.0000000000000000000000003896 110.0
PJD3_k127_5761379_4 TIGRFAM archaeal flagellin N-terminal-like domain - - - 0.000000000000000000000003054 120.0
PJD3_k127_5761379_6 von Willebrand factor, type A K04043,K07114 - - 0.0000000000000000000009293 102.0
PJD3_k127_5761379_7 Histidine kinase - - - 0.000000000000000000009335 102.0
PJD3_k127_5761379_9 - - - - 0.0000000000004222 76.0
PJD3_k127_5940080_0 TIGRFAM ABC transporter, substrate-binding protein, aliphatic sulfonates family K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 456.0
PJD3_k127_5940080_1 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 437.0
PJD3_k127_5940080_2 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 417.0
PJD3_k127_5940080_3 Multicopper - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 401.0
PJD3_k127_5980379_0 Peptidase family M3 K08602 - - 2.868e-269 833.0
PJD3_k127_5980379_1 DEAD DEAH box helicase K05592 - 3.6.4.13 2.181e-240 747.0
PJD3_k127_5980379_10 - - - - 0.0000000000000000000000000000000000000000000000000000002796 194.0
PJD3_k127_5980379_11 - - - - 0.000000000000000000000000000000000000000000000000000001495 196.0
PJD3_k127_5980379_12 - - - - 0.000000000000000000000000000000000000000003421 158.0
PJD3_k127_5980379_13 - - - - 0.0000000000000000000000000000000000007694 140.0
PJD3_k127_5980379_14 CBS domain - - - 0.0000000000000000000000000000000000009372 143.0
PJD3_k127_5980379_15 Lrp/AsnC ligand binding domain - - - 0.000000000000000000000000000000000009251 136.0
PJD3_k127_5980379_16 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.000000000000000000000000000000000009716 136.0
PJD3_k127_5980379_17 Peptidase family M3 K08602 - - 0.00000000000000000000000000000003502 127.0
PJD3_k127_5980379_19 domain protein - - - 0.00000000000003313 87.0
PJD3_k127_5980379_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 464.0
PJD3_k127_5980379_3 Belongs to the Pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 399.0
PJD3_k127_5980379_4 COG1651 Protein-disulfide isomerase K21990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005619 363.0
PJD3_k127_5980379_5 Belongs to the PdaD family K02626 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009709 341.0
PJD3_k127_5980379_6 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 340.0
PJD3_k127_5980379_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 303.0
PJD3_k127_5980379_8 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001316 265.0
PJD3_k127_5980379_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002597 254.0
PJD3_k127_6031329_0 ribosomal protein L3 K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009598 477.0
PJD3_k127_6031329_1 Proteasome endopeptidase complex K03432 - 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006052 426.0
PJD3_k127_6031329_2 Putative RNA methyltransferase K09142 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 415.0
PJD3_k127_6031329_3 Domain of unknown function (DUF371) K09738 - - 0.000000000000000000000000000000000000000000000000000001959 194.0
PJD3_k127_6097461_0 ThiF family K21029 - 2.7.7.80 3.446e-250 777.0
PJD3_k127_6097461_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 5.965e-246 761.0
PJD3_k127_6097461_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 466.0
PJD3_k127_6097461_3 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006459 382.0
PJD3_k127_6097461_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 337.0
PJD3_k127_6097461_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000009336 229.0
PJD3_k127_6097461_6 - - - - 0.00000000000000000000000000000000000000000000000000000000001305 217.0
PJD3_k127_6097461_7 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.00000000000000000000000000000000000000000000000000000000001692 207.0
PJD3_k127_6105008_0 Heat shock 70 kDa protein K04043 - - 0.0 1022.0
PJD3_k127_6105008_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - - 7.782e-219 682.0
PJD3_k127_6105008_2 DnaJ central domain K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 580.0
PJD3_k127_6105008_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K03330 - 6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 573.0
PJD3_k127_6105008_4 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 415.0
PJD3_k127_6105008_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000000000000000000000000002251 231.0
PJD3_k127_6105008_6 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000006907 132.0
PJD3_k127_6105008_7 - - - - 0.000000000000000004263 84.0
PJD3_k127_6180491_0 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis K07332 - - 7.186e-194 617.0
PJD3_k127_6180491_1 TIGRFAM archaeal flagellin N-terminal-like domain - - - 0.0000000000000000000000000000000000000000000000000000000002346 211.0
PJD3_k127_6180491_2 Type II secretion system (T2SS), protein F K07333 - - 0.000000000000000000000000000000000003276 154.0
PJD3_k127_619355_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 332.0
PJD3_k127_619355_1 PFAM Alcohol dehydrogenase K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000001489 240.0
PJD3_k127_619355_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000002866 219.0
PJD3_k127_619355_3 - - - - 0.000000000000000000000000000009588 121.0
PJD3_k127_619355_4 - - - - 0.000000000000000000000000001785 112.0
PJD3_k127_619355_5 - - - - 0.00000000000001558 74.0
PJD3_k127_6219229_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01895 - 6.2.1.1 0.0 1058.0
PJD3_k127_6219229_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 8.154e-283 875.0
PJD3_k127_6219229_10 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000005381 232.0
PJD3_k127_6219229_11 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000002018 180.0
PJD3_k127_6219229_12 - - - - 0.00000000000000000000000000000000001854 141.0
PJD3_k127_6219229_13 - - - - 0.0000000000000000000006891 99.0
PJD3_k127_6219229_14 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.00000000000000000001475 91.0
PJD3_k127_6219229_2 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 593.0
PJD3_k127_6219229_3 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 589.0
PJD3_k127_6219229_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 394.0
PJD3_k127_6219229_5 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009669 356.0
PJD3_k127_6219229_6 transcriptional - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003728 328.0
PJD3_k127_6219229_7 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001069 280.0
PJD3_k127_6219229_8 PUA domain K07575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001751 260.0
PJD3_k127_6219229_9 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008187 244.0
PJD3_k127_6228597_0 Sugar-specific transcriptional regulator TrmB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 486.0
PJD3_k127_6228597_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 346.0
PJD3_k127_6228597_2 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000139 259.0
PJD3_k127_6228597_3 Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000007629 244.0
PJD3_k127_6228772_0 PFAM Aldehyde dehydrogenase K00135,K18601 - 1.2.1.16,1.2.1.20,1.2.1.79 4.82e-244 755.0
PJD3_k127_6228772_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 583.0
PJD3_k127_6228772_2 Catalyzes the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. Also has an independent pyrophosphate phosphohydrolase activity K08096 - 3.5.4.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007677 339.0
PJD3_k127_6228772_3 Hemerythrin HHE cation binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 291.0
PJD3_k127_6228772_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K02858 - 4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000004796 256.0
PJD3_k127_6228772_5 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000005372 215.0
PJD3_k127_6228772_6 RibD C-terminal domain K14654 - 1.1.1.302 0.000000000000000000000000000000000000000000000001456 181.0
PJD3_k127_6228772_7 - - - - 0.0000000000000000000009112 96.0
PJD3_k127_6234217_0 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 448.0
PJD3_k127_6234217_1 Serine aminopeptidase, S33 K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 432.0
PJD3_k127_6234217_2 PFAM 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008306 288.0
PJD3_k127_6234217_3 - - - - 0.00000000000000000000000000000000000000000000000007183 181.0
PJD3_k127_6234217_5 - - - - 0.000000001519 62.0
PJD3_k127_6234217_6 - - - - 0.000004384 54.0
PJD3_k127_6260242_0 Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 479.0
PJD3_k127_6260242_1 Chorismate mutase type II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 440.0
PJD3_k127_6260242_2 NUDIX domain - - - 0.00000000000000004403 81.0
PJD3_k127_6284375_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 9.37e-203 638.0
PJD3_k127_6284375_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 463.0
PJD3_k127_6284375_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008492 346.0
PJD3_k127_6284375_3 Shikimate kinase K00891 - 2.7.1.71 0.000000000000000000000000000000000000009434 156.0
PJD3_k127_6299174_0 Belongs to the enoyl-CoA hydratase isomerase family K15019 - 4.2.1.116 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 482.0
PJD3_k127_6299174_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 291.0
PJD3_k127_6299174_2 Iron-sulfur cluster assembly accessory protein K13628 - - 0.0000000000000000000000000000000000000000000000000000000000000001067 222.0
PJD3_k127_6299174_3 CBS domain - - - 0.00000000000000000000000000000000009536 136.0
PJD3_k127_6299174_4 Succinyl-CoA ligase like flavodoxin domain K18594 - - 0.0000000000000000000000000002379 114.0
PJD3_k127_6326875_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 403.0
PJD3_k127_6326875_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000002908 192.0
PJD3_k127_6326875_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.000000000001211 78.0
PJD3_k127_633136_0 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 349.0
PJD3_k127_633136_1 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002997 247.0
PJD3_k127_633136_2 ASCH domain - - - 0.0000000000000000000000000000000000000000444 153.0
PJD3_k127_633136_3 - - - - 0.0000000000000000000000000002248 115.0
PJD3_k127_6357912_0 GTPase of unknown function C-terminal K06942 - - 1.603e-222 694.0
PJD3_k127_6357912_1 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009813 240.0
PJD3_k127_6357912_2 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000000000000002 206.0
PJD3_k127_6357912_3 - - - - 0.000000000000000000000000000000000000009185 148.0
PJD3_k127_6357912_4 - - - - 0.0000000000000000000000000000000002599 132.0
PJD3_k127_6357912_5 Male sterility protein K00091,K19997 - 1.1.1.219,5.1.3.26 0.0000000000000000000000004492 116.0
PJD3_k127_6395259_0 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into K04799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 580.0
PJD3_k127_6395259_1 - - - - 0.000000000000000005302 87.0
PJD3_k127_6395259_2 - - - - 0.000000000000001059 79.0
PJD3_k127_6395259_3 - - - - 0.0000000000006156 70.0
PJD3_k127_6464236_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000003195 218.0
PJD3_k127_6464236_1 sister chromatid segregation - - - 0.0000000000000000000000000000000003006 141.0
PJD3_k127_6464236_2 - - - - 0.0000000000001795 71.0
PJD3_k127_6464236_3 domain protein K12516 - - 0.0000005119 62.0
PJD3_k127_6464236_5 - - - - 0.0005305 48.0
PJD3_k127_6465833_0 Mg2 transporter protein K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 533.0
PJD3_k127_6465833_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 379.0
PJD3_k127_6465833_2 copper ion binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001143 274.0
PJD3_k127_6465833_3 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000002276 200.0
PJD3_k127_6465833_4 PFAM Carboxymuconolactone decarboxylase - - - 0.00000000000000000000000000000000000000000001747 165.0
PJD3_k127_6465833_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000002274 160.0
PJD3_k127_6465833_6 - - - - 0.0000000000000000000000000000000000000132 145.0
PJD3_k127_6484738_0 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000678 310.0
PJD3_k127_6484738_1 Ketosteroid isomerase-related protein - - - 0.00000000000000000000000000000000000000000000000000000003385 199.0
PJD3_k127_6484738_2 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K07646,K20989 - 2.7.13.3 0.000000000000000000000002243 106.0
PJD3_k127_6523445_0 DNA polymerase K02319 - 2.7.7.7 0.0 1472.0
PJD3_k127_6523445_1 DEAD DEAH box helicase domain protein K03703,K10896 - - 4.533e-256 798.0
PJD3_k127_6523445_10 - - - - 0.0000000000000003571 81.0
PJD3_k127_6523445_11 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette K15342 - - 0.00000000000001669 73.0
PJD3_k127_6523445_12 - - - - 0.00000006117 57.0
PJD3_k127_6523445_13 sister chromatid segregation - - - 0.0000002617 59.0
PJD3_k127_6523445_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009324 516.0
PJD3_k127_6523445_3 flavodoxin nitric oxide synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 426.0
PJD3_k127_6523445_4 MafB19-like deaminase K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 340.0
PJD3_k127_6523445_5 Restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001106 286.0
PJD3_k127_6523445_6 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000001254 213.0
PJD3_k127_6523445_7 PPIC-type PPIASE domain K07533 - 5.2.1.8 0.000000000000000000000000000000000000000000007565 164.0
PJD3_k127_6523445_8 Sugar efflux transporter for intercellular exchange K15383 - - 0.000000000000000000000000000000000003927 138.0
PJD3_k127_6523445_9 - - - - 0.000000000000000006946 84.0
PJD3_k127_6531009_0 phenylalanyl-tRNA synthetase, beta subunit K01890 - 6.1.1.20 1.271e-268 835.0
PJD3_k127_6531009_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 5.039e-224 696.0
PJD3_k127_6531009_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005831 325.0
PJD3_k127_6531009_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000663 331.0
PJD3_k127_6531009_4 EVE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005703 238.0
PJD3_k127_6531009_5 - - - - 0.00000000000000000000000000000000000000000001201 166.0
PJD3_k127_6531009_6 Lrp/AsnC ligand binding domain - - - 0.0000000000000000000000000000000000000000004047 158.0
PJD3_k127_6531009_7 - - - - 0.00000000000000000000000000000000000000002136 153.0
PJD3_k127_6531009_8 - - - - 0.0000000000000000000000000000002748 124.0
PJD3_k127_6531009_9 - - - - 0.000000000000000000000004061 102.0
PJD3_k127_6538156_0 Radical SAM - - - 0.0 1046.0
PJD3_k127_6538156_1 Cysteine desulfurase K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004827 581.0
PJD3_k127_6538156_10 peptidyl-tyrosine sulfation - - - 0.000001086 50.0
PJD3_k127_6538156_2 Belongs to the LDH MDH superfamily K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006401 545.0
PJD3_k127_6538156_3 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 544.0
PJD3_k127_6538156_4 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 532.0
PJD3_k127_6538156_5 AIR carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000587 412.0
PJD3_k127_6538156_6 tRNA methyl transferase K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 337.0
PJD3_k127_6538156_7 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000001336 230.0
PJD3_k127_6538156_8 serine-type endopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000004575 222.0
PJD3_k127_6538156_9 - - - - 0.000000000000000000000000000000000000000000000000008602 181.0
PJD3_k127_663634_0 histidine kinase HAMP region domain protein K03406,K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 450.0
PJD3_k127_663634_1 response regulator, receiver K02485,K02490,K03413 - - 0.000000000000000000000000000000005782 131.0
PJD3_k127_663634_2 - - - - 0.0000000000000000000000009243 106.0
PJD3_k127_663634_3 - - - - 0.0000002405 54.0
PJD3_k127_663634_4 sister chromatid segregation - - - 0.000006517 56.0
PJD3_k127_688802_0 inner membrane component K02034 - - 3.887e-234 730.0
PJD3_k127_688802_1 inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006919 597.0
PJD3_k127_693958_0 Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 561.0
PJD3_k127_694733_0 Glyoxalase-like domain K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000004987 247.0
PJD3_k127_694733_1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000000000000000000000000000000000000000002035 185.0
PJD3_k127_694733_2 - - - - 0.00000000000000000000000000000000000000000000001171 174.0
PJD3_k127_694733_3 - - - - 0.000000000000000000000000000000000000000000001458 168.0
PJD3_k127_694733_4 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000001612 144.0
PJD3_k127_694733_5 zinc finger - - - 0.00000000000000000002979 94.0
PJD3_k127_7080_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 1.542e-207 651.0
PJD3_k127_7080_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 486.0
PJD3_k127_7080_2 Pfam:DUF137 K09722 - 6.3.2.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003196 268.0
PJD3_k127_7080_3 Nodulation protein S (NodS) - - - 0.0000000000000000000000000000000000000000000002 170.0
PJD3_k127_739597_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1362.0
PJD3_k127_745963_0 TIGRFAM excinuclease ABC, C subunit K03703 - - 1.737e-291 900.0
PJD3_k127_745963_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 3.041e-223 693.0
PJD3_k127_745963_2 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 552.0
PJD3_k127_758303_0 Archaeal Nre, N-terminal - - - 5.313e-200 627.0
PJD3_k127_758303_1 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004757 441.0
PJD3_k127_758303_10 Protein of unknown function DUF99 K09120 - - 0.000000000000000003764 85.0
PJD3_k127_758303_11 - - - - 0.00000000000002273 78.0
PJD3_k127_758303_2 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 413.0
PJD3_k127_758303_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 404.0
PJD3_k127_758303_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008541 346.0
PJD3_k127_758303_5 DSBA oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009645 321.0
PJD3_k127_758303_6 - - - - 0.00000000000000000000000000000000000000000000000000000000003611 206.0
PJD3_k127_758303_7 - - - - 0.0000000000000000000000000000000000000000000000000000001892 198.0
PJD3_k127_758303_8 zinc finger - - - 0.0000000000000000000000000000000000000000000000001059 179.0
PJD3_k127_769439_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 1.734e-217 678.0
PJD3_k127_769439_1 Deoxyhypusine synthase K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007111 563.0
PJD3_k127_769439_2 PAC2 family K06869 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006357 319.0
PJD3_k127_769439_3 Alba K03622 - - 0.00000000000000000000000000000000000000000000000000001494 191.0
PJD3_k127_769439_4 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K13566 - 3.5.1.3 0.0000000000000000000000001335 107.0
PJD3_k127_769439_5 - - - - 0.00000000000001334 76.0
PJD3_k127_812211_0 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 9.948e-243 756.0
PJD3_k127_812211_1 TIGRFAM precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K03399 - 2.1.1.289 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 363.0
PJD3_k127_812211_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000783 320.0
PJD3_k127_838267_0 Archaeal TRASH domain - - - 0.000000000000000000000000000000000000000000000000000006085 193.0
PJD3_k127_838267_1 DoxX family K15977,K16937 - 1.8.5.2 0.0000000000000000000000000000000000000000000004326 169.0
PJD3_k127_838267_5 - - - - 0.000000000001126 72.0
PJD3_k127_84880_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 7.783e-207 649.0
PJD3_k127_84880_1 Phosphate uptake regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007424 528.0
PJD3_k127_84880_2 kinase, sugar kinase superfamily K06982 - 2.7.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 405.0
PJD3_k127_84880_3 Pfam:DUF137 K09722 - 6.3.2.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 363.0
PJD3_k127_84880_4 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 296.0
PJD3_k127_84880_5 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.000000000000000000000000000000000002938 138.0
PJD3_k127_851083_0 Hydroxymethylglutaryl-coenzyme A synthase N terminal K01641 - 2.3.3.10 2.318e-266 824.0
PJD3_k127_851083_1 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 337.0
PJD3_k127_851083_2 - - - - 0.000000000000000000000000000000000000000000000004686 177.0
PJD3_k127_851083_3 response regulator, receiver K03413 - - 0.0000000000001701 79.0
PJD3_k127_860181_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 3.707e-240 746.0
PJD3_k127_860181_1 PFAM Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003623 264.0
PJD3_k127_860181_2 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000002415 125.0
PJD3_k127_896721_0 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004918 308.0
PJD3_k127_896721_1 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000025 203.0
PJD3_k127_896721_2 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000000001009 192.0
PJD3_k127_896721_3 Tetratricopeptide repeat - - - 0.000000000000000000000000102 108.0
PJD3_k127_906166_0 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 496.0
PJD3_k127_906166_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17884 - 2.7.8.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 310.0
PJD3_k127_906166_2 Belongs to the class-II aminoacyl-tRNA synthetase family K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000007307 164.0
PJD3_k127_906166_3 ribosomal protein K02976 - - 0.00000000000000000000000000000008177 124.0
PJD3_k127_906166_4 - - - - 0.00007088 48.0
PJD3_k127_911266_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 8.926e-203 632.0
PJD3_k127_911266_1 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008992 452.0
PJD3_k127_911266_2 UPF0126 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 304.0
PJD3_k127_911266_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 291.0
PJD3_k127_911266_4 Binds directly to 23S rRNA. Probably involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000354 274.0
PJD3_k127_911266_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02869 - - 0.0000000000000000000000000000000000001805 144.0
PJD3_k127_911617_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1257.0
PJD3_k127_911617_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 7.646e-279 860.0
PJD3_k127_911617_11 - - - - 0.000004111 50.0
PJD3_k127_911617_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 424.0
PJD3_k127_911617_3 SAICAR synthetase K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 335.0
PJD3_k127_911617_4 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000001083 233.0
PJD3_k127_911617_5 - - - - 0.000000000000000000000000000000000000000000000000000004663 191.0
PJD3_k127_911617_6 Domain of unknown function (DUF427) - - - 0.00000000000000000000000000000000000000000000000000001131 189.0
PJD3_k127_911617_7 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000008197 177.0
PJD3_k127_911617_8 - - - - 0.00000000000000000000000000000000000000000000003937 172.0
PJD3_k127_911617_9 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000009687 151.0
PJD3_k127_918768_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 1.313e-238 743.0
PJD3_k127_918768_1 - - - - 2.477e-210 663.0
PJD3_k127_918768_2 Tetrapyrrole (Corrin/Porphyrin) Methylases K05934 - 2.1.1.131 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 477.0
PJD3_k127_918768_3 Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication K04802 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 448.0
PJD3_k127_932202_0 DHHA1 domain K07463 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 579.0
PJD3_k127_932202_1 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001508 254.0
PJD3_k127_932202_2 - - - - 0.000000000000000000000000000000000000000000000000000002428 193.0
PJD3_k127_932202_3 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000001852 117.0
PJD3_k127_932202_4 Predicted membrane protein (DUF2061) - - - 0.00000374 53.0
PJD3_k127_934399_0 Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA K03265 - - 2.093e-236 735.0
PJD3_k127_934399_1 Probable cobalt transporter subunit (CbtA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 382.0
PJD3_k127_934399_10 - - - - 0.0000000000000000000000003363 104.0
PJD3_k127_934399_2 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 348.0
PJD3_k127_934399_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 308.0
PJD3_k127_934399_4 Domain of unknown function (DUF4443) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009596 301.0
PJD3_k127_934399_5 HIT domain K02503 - - 0.000000000000000000000000000000000000000000000000000000000000199 214.0
PJD3_k127_934399_6 transcriptional regulators - - - 0.000000000000000000000000000000000000000000000000000005041 191.0
PJD3_k127_934399_7 transcriptional regulators - - - 0.0000000000000000000000000000000000000000000000002454 177.0
PJD3_k127_934399_8 - - - - 0.0000000000000000000000000000000000004972 151.0
PJD3_k127_934399_9 Probable cobalt transporter subunit (CbtB) - - - 0.00000000000000000000000000000006386 125.0
PJD3_k127_946756_0 biotin-(Acetyl-CoA-carboxylase) ligase K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000957 491.0
PJD3_k127_946756_1 - - - - 0.000000000000000000000005542 105.0
PJD3_k127_948452_0 Radical SAM K11781 - 2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 591.0
PJD3_k127_948452_1 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 568.0
PJD3_k127_948452_2 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 399.0
PJD3_k127_948452_3 - - - - 0.000000000000000000000002546 104.0
PJD3_k127_94847_0 von Willebrand factor (vWF) type A domain - - - 7.148e-279 863.0
PJD3_k127_94847_1 ATPase family associated with various cellular activities (AAA) K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 458.0
PJD3_k127_94847_2 ASCH domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001014 233.0
PJD3_k127_94847_3 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000006627 239.0
PJD3_k127_94847_4 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.00000000000000000000000000000000000000000003137 162.0
PJD3_k127_94847_5 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.0000000000000000974 79.0
PJD3_k127_951131_0 - - - - 1.634e-220 692.0
PJD3_k127_951131_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000548 372.0
PJD3_k127_951131_2 - - - - 0.0000000000000000000002126 96.0
PJD3_k127_951131_3 - - - - 0.0000000000000000000004725 95.0
PJD3_k127_951131_4 Blue copper protein - - - 0.00000000000000000000818 94.0
PJD3_k127_99320_0 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000005919 203.0
PJD3_k127_99320_1 sister chromatid segregation - - - 0.00000000000001312 87.0
PJD3_k127_99320_2 - - - - 0.0000000000000539 85.0