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Overview

ID MAG02975
Name PJS1_bin.50
Sample SMP0070
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Pseudomonadales
Family DSM-6294
Genus Thalassolituus
Species
Assembly information
Completeness (%) 64.89
Contamination (%) 2.77
GC content (%) 47.0
N50 (bp) 5,743
Genome size (bp) 2,388,940

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2356

Gene name Description KEGG GOs EC E-value Score Sequence
PJS1_k127_1015273_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 3e-323 990.0
PJS1_k127_1015273_1 acyl-CoA dehydrogenase - - - 6.97e-283 870.0
PJS1_k127_1015273_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 1.098e-209 653.0
PJS1_k127_1015273_3 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 518.0
PJS1_k127_1015273_4 Phosphoserine phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981 446.0
PJS1_k127_1015273_5 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 416.0
PJS1_k127_1015273_6 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 397.0
PJS1_k127_1015273_7 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 392.0
PJS1_k127_1015273_9 PFAM Cold-shock protein, DNA-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000002357 236.0
PJS1_k127_1017625_0 Putative diguanylate phosphodiesterase - - - 2.503e-243 752.0
PJS1_k127_1017625_1 TRAP transporter T-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 504.0
PJS1_k127_1017625_2 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 374.0
PJS1_k127_1017625_3 Diguanylate cyclase - - - 0.00000000000000000000000000000001627 130.0
PJS1_k127_1018211_0 Monooxygenase, flavin-binding family - - - 0.0 1091.0
PJS1_k127_1018211_1 COG2207 AraC-type DNA-binding domain-containing proteins - - - 1.581e-212 661.0
PJS1_k127_1018211_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 4.213e-197 617.0
PJS1_k127_1018211_3 GGDEF domain K21019 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 414.0
PJS1_k127_1018211_4 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000000000000000000000000000000009762 189.0
PJS1_k127_1035707_0 Type I restriction-modification system methyltransferase subunit K03427 - 2.1.1.72 0.0 1005.0
PJS1_k127_1035707_1 Threonine synthase K01733 - 4.2.3.1 4.355e-307 943.0
PJS1_k127_1035707_11 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.0000000000000000000000000000000000000000002491 158.0
PJS1_k127_1035707_12 - - - - 0.0000000000000000000000006736 106.0
PJS1_k127_1035707_13 - - - - 0.0000000000000001909 84.0
PJS1_k127_1035707_2 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 6.224e-243 754.0
PJS1_k127_1035707_3 Putative ATP-dependant zinc protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 445.0
PJS1_k127_1035707_4 Type I restriction modification DNA specificity domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 390.0
PJS1_k127_1035707_5 Protein of unknown function (DUF2947) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 344.0
PJS1_k127_1035707_6 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 316.0
PJS1_k127_1035707_7 Protein of unknown function (DUF3087) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008354 315.0
PJS1_k127_1035707_8 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 303.0
PJS1_k127_1049026_0 RNB K01147,K12573 - 3.1.13.1 0.0 1232.0
PJS1_k127_1049026_1 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 404.0
PJS1_k127_1049026_2 - - - - 0.00000000000000000000000000000000000000000000000000000000003074 205.0
PJS1_k127_10642_0 Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain K00101,K00104 - 1.1.2.3,1.1.3.15 6.545e-194 608.0
PJS1_k127_10642_1 PKHD-type hydroxylase K07336 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008676 408.0
PJS1_k127_10642_2 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000000000000000000000000000000000000000000000000000006868 225.0
PJS1_k127_1078790_0 Adenine specific DNA methylase Mod K07316 - 2.1.1.72 6.371e-303 957.0
PJS1_k127_1136559_0 - - - - 1.952e-264 815.0
PJS1_k127_1136559_1 Predicted permease K07089 - - 1.796e-236 734.0
PJS1_k127_1136559_2 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 553.0
PJS1_k127_1136559_3 Protein of unknown function (DUF3833) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 393.0
PJS1_k127_1136559_4 Killing trait - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 395.0
PJS1_k127_1136559_5 Transcriptional - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 289.0
PJS1_k127_1136559_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 285.0
PJS1_k127_1136559_7 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000001585 188.0
PJS1_k127_1138868_0 Methionine aminopeptidase K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 542.0
PJS1_k127_1138868_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005557 535.0
PJS1_k127_1138868_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 491.0
PJS1_k127_1138868_3 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 477.0
PJS1_k127_1138868_4 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 424.0
PJS1_k127_1138868_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000001286 186.0
PJS1_k127_1139001_0 Secretory lipase - - - 0.0 1174.0
PJS1_k127_1139001_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0 1014.0
PJS1_k127_1139001_2 Arabinose-binding domain of AraC transcription regulator, N-term - - - 1.869e-212 662.0
PJS1_k127_1139001_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 522.0
PJS1_k127_1139001_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003728 346.0
PJS1_k127_114545_0 acetamidase formamidase K01455 - 3.5.1.49 5.338e-287 883.0
PJS1_k127_114545_1 Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007801 571.0
PJS1_k127_114545_2 C-terminal, D2-small domain, of ClpB protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 297.0
PJS1_k127_1158463_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.0 1001.0
PJS1_k127_1158463_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 4.282e-227 704.0
PJS1_k127_1158463_2 Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA K00219 - 1.3.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 524.0
PJS1_k127_1158463_3 - - - - 0.00000000000000000000000000000000000000000000001026 171.0
PJS1_k127_1163966_0 Phosphate transport system permease K02038 - - 1.358e-227 707.0
PJS1_k127_1163966_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 541.0
PJS1_k127_1163966_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 467.0
PJS1_k127_1163966_3 COG3203 Outer membrane protein (porin) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009453 458.0
PJS1_k127_1164443_0 Belongs to the peptidase M16 family K06972 - - 0.0 1273.0
PJS1_k127_1164443_1 COG0520 Selenocysteine lyase - - - 2.19e-248 767.0
PJS1_k127_1164443_2 Protein of unknown function (DUF1585) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008738 340.0
PJS1_k127_1177985_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0 1149.0
PJS1_k127_1177985_1 COG0668 Small-conductance mechanosensitive channel K22044 - - 4.857e-262 814.0
PJS1_k127_1177985_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307,K11928 - - 6.728e-245 764.0
PJS1_k127_1177985_3 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 4.154e-229 718.0
PJS1_k127_1177985_4 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 2.714e-220 683.0
PJS1_k127_1177985_5 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 499.0
PJS1_k127_1177985_6 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 374.0
PJS1_k127_1177985_7 helix_turn_helix ASNC type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001546 267.0
PJS1_k127_1177985_8 Phospholipase_D-nuclease N-terminal - - - 0.00000000000000000000000000157 112.0
PJS1_k127_1197828_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 603.0
PJS1_k127_1197828_1 Domain of unknown function (DUF4062) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 561.0
PJS1_k127_1197828_2 auxin efflux carrier K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000029 218.0
PJS1_k127_1197828_3 Regulatory protein ArsR - - - 0.00000000000000000000000000000000000000000000000000000000111 204.0
PJS1_k127_1197828_4 protein conserved in bacteria K05952 - - 0.000000000000006096 74.0
PJS1_k127_1200693_0 Type II secretion system (T2SS), protein K K02460 - - 1.315e-208 651.0
PJS1_k127_1200693_1 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 512.0
PJS1_k127_1200693_2 general secretion pathway protein K02459 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 449.0
PJS1_k127_1200693_3 protein transport across the cell outer membrane K02246,K02457,K02672,K08084 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003693 372.0
PJS1_k127_1200693_4 secretion system protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000001017 200.0
PJS1_k127_1200693_5 General secretion pathway protein I K02458 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.00000000000001479 78.0
PJS1_k127_1208111_0 belongs to the aldehyde dehydrogenase family - - - 5.648e-298 915.0
PJS1_k127_1208111_1 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 300.0
PJS1_k127_1208111_2 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000004718 199.0
PJS1_k127_1214459_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.0 1038.0
PJS1_k127_1214459_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 5.899e-208 647.0
PJS1_k127_1214459_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 534.0
PJS1_k127_1214459_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000003776 116.0
PJS1_k127_1229934_0 Glycerol-3-phosphate dehydrogenase K00111,K21054 - 1.1.1.402,1.1.5.3 0.0 1038.0
PJS1_k127_1229934_1 PFAM glycosyl transferase family 39 - - - 4.4e-323 991.0
PJS1_k127_1229934_2 signal transduction protein containing EAL and modified HD-GYP domains - - - 6.045e-235 730.0
PJS1_k127_1229934_3 COG0859 ADP-heptose LPS heptosyltransferase K02841 - - 3.538e-212 660.0
PJS1_k127_1229934_4 Two component signalling adaptor domain K03415 - - 1.082e-196 614.0
PJS1_k127_1229934_5 Lysylphosphatidylglycerol synthase TM region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 567.0
PJS1_k127_1229934_6 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 444.0
PJS1_k127_1229934_7 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000677 302.0
PJS1_k127_1229934_8 PFAM phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.000000001333 64.0
PJS1_k127_1237810_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 9.134e-263 811.0
PJS1_k127_1237810_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 8.062e-245 758.0
PJS1_k127_1237810_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002693 603.0
PJS1_k127_1237810_3 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 565.0
PJS1_k127_1237810_4 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007878 394.0
PJS1_k127_1237810_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 345.0
PJS1_k127_1237904_0 Histidine kinase - - - 0.0 2067.0
PJS1_k127_1237904_1 response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000368 191.0
PJS1_k127_1270085_0 TonB dependent receptor - - - 0.0 1275.0
PJS1_k127_1270085_1 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 451.0
PJS1_k127_1270085_2 YKOF-related Family - - - 0.00000000000000000000000000000000000000000000000001437 179.0
PJS1_k127_1295088_0 twitching motility protein K02669 - - 5.893e-218 677.0
PJS1_k127_1295088_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 419.0
PJS1_k127_1295088_2 twitching motility protein K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008096 314.0
PJS1_k127_1295088_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 296.0
PJS1_k127_13038_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.132e-296 910.0
PJS1_k127_13038_1 tRNA (Uracil-5-)-methyltransferase K03215 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070041,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009431 290.0
PJS1_k127_1306793_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 1.297e-319 981.0
PJS1_k127_1306793_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007149 516.0
PJS1_k127_1306793_2 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000000000000000000000009017 156.0
PJS1_k127_1312560_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.315e-287 883.0
PJS1_k127_1312560_1 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 569.0
PJS1_k127_1312560_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286,K12976,K16079 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 349.0
PJS1_k127_1312560_3 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008287 297.0
PJS1_k127_1312560_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002858 274.0
PJS1_k127_1315575_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 1.146e-259 799.0
PJS1_k127_1315575_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004745 606.0
PJS1_k127_1315575_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000001358 233.0
PJS1_k127_1315575_3 2 iron, 2 sulfur cluster binding K02192 GO:0003674,GO:0005488,GO:0048037,GO:0051536,GO:0051537,GO:0051540 - 0.0000000000000000000000000000000000000000591 151.0
PJS1_k127_1330149_0 Binding-protein-dependent transport system inner membrane component K02050 - - 2.594e-196 613.0
PJS1_k127_1330149_1 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003858 585.0
PJS1_k127_1330149_2 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 521.0
PJS1_k127_1330149_3 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 454.0
PJS1_k127_1361475_0 UDP-glucose 4-epimerase K01784 - 5.1.3.2 4.572e-223 693.0
PJS1_k127_1361475_1 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 456.0
PJS1_k127_1361475_2 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000115 221.0
PJS1_k127_1368354_0 PHB de-polymerase C-terminus K05973 - 3.1.1.75 4.946e-269 828.0
PJS1_k127_1368354_1 MATE efflux family protein - - - 1.175e-256 795.0
PJS1_k127_1368354_2 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 481.0
PJS1_k127_1368354_3 Salt-induced outer membrane protein K07283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 419.0
PJS1_k127_1368354_4 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000003944 235.0
PJS1_k127_1369865_1 AraC-type transcriptional regulator N-terminus - - - 7.378e-202 628.0
PJS1_k127_1369865_2 Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes K00138 - - 1.026e-198 620.0
PJS1_k127_1369865_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008849 334.0
PJS1_k127_1382754_0 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0 1654.0
PJS1_k127_1382754_1 Oxaloacetate decarboxylase K01571 - 4.1.1.3 0.0 1148.0
PJS1_k127_1382754_10 Lyase and sodium transporter K01573 - 4.1.1.3 0.0000000000000000000000000000000000000005584 149.0
PJS1_k127_1382754_11 Putative quorum-sensing-regulated virulence factor K02342,K09954,K10857 - 2.7.7.7 0.00000000000000000000000000001265 119.0
PJS1_k127_1382754_2 Na transporting methylmalonyl-CoA oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 1.405e-242 751.0
PJS1_k127_1382754_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs K05541 - - 6.948e-205 639.0
PJS1_k127_1382754_4 glutamine amidotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 461.0
PJS1_k127_1382754_5 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.0000000000000000000000000000000000000000000000000000000000005976 210.0
PJS1_k127_1382754_6 Protein of unknown function (DUF3301) - - - 0.0000000000000000000000000000000000000000000000000000000001381 204.0
PJS1_k127_1382754_7 accelerates isomerization of the peptidyl prolyl bond K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000004828 190.0
PJS1_k127_1382754_8 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.000000000000000000000000000000000000000000000000000005068 190.0
PJS1_k127_1382754_9 GCN5-related N-acetyl-transferase K06975 - - 0.00000000000000000000000000000000000000002403 154.0
PJS1_k127_1405520_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0 1173.0
PJS1_k127_1405520_1 Subtilase family - - - 8.558e-251 779.0
PJS1_k127_1405520_2 Transglutaminase-like superfamily - - - 5.086e-236 731.0
PJS1_k127_1405520_3 DeoR C terminal sensor domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 503.0
PJS1_k127_1405520_4 Protein of unknown function (DUF560) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 480.0
PJS1_k127_1405520_5 Diguanylate cyclase K13590 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008681 472.0
PJS1_k127_1405520_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006508 387.0
PJS1_k127_1405520_7 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 301.0
PJS1_k127_1405520_8 cellulase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002842 279.0
PJS1_k127_1407060_0 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 2.938e-277 854.0
PJS1_k127_1407060_1 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 2.774e-255 787.0
PJS1_k127_1407060_2 Na -dependent transporter K03453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 539.0
PJS1_k127_1407060_3 Spermidine synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 530.0
PJS1_k127_1407060_4 Adenylate cyclase K18446 - 3.6.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007639 302.0
PJS1_k127_1411004_0 Diguanylate cyclase - - - 0.0 1510.0
PJS1_k127_1411004_1 glycosylase K03575 - - 7.303e-195 608.0
PJS1_k127_1411004_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 497.0
PJS1_k127_1411004_3 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009773 489.0
PJS1_k127_1411004_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 431.0
PJS1_k127_1411004_5 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005144 401.0
PJS1_k127_1411004_6 intermembrane phospholipid transfer K07323 GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0008150,GO:0009987,GO:0010876,GO:0015711,GO:0015748,GO:0015914,GO:0016043,GO:0030288,GO:0030313,GO:0031975,GO:0033036,GO:0042597,GO:0044464,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071840,GO:0120009,GO:0120010 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 380.0
PJS1_k127_1411004_7 acetyltransferase K15866,K19802 - 5.1.1.20,5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000001616 237.0
PJS1_k127_1420241_0 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 355.0
PJS1_k127_1420241_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 294.0
PJS1_k127_1420241_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000005863 112.0
PJS1_k127_1429049_0 hydroxylase K18800 - - 4.168e-245 759.0
PJS1_k127_1429049_1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K03185 - - 5.684e-218 677.0
PJS1_k127_1429049_2 Signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 553.0
PJS1_k127_1429049_3 SAM-dependent K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 331.0
PJS1_k127_1436412_0 TonB dependent receptor K16089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008495 361.0
PJS1_k127_1436412_1 Haem utilisation ChuX/HutX K07225 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 291.0
PJS1_k127_1436412_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001942 273.0
PJS1_k127_1436412_3 HmuY protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000025 250.0
PJS1_k127_1436412_4 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000002474 201.0
PJS1_k127_1436412_5 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000001685 120.0
PJS1_k127_1436717_0 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005859 606.0
PJS1_k127_1436717_1 Pfam:DUF955 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008634 484.0
PJS1_k127_1436717_2 - - - - 0.000000000000000000000000000000000000001192 151.0
PJS1_k127_1436717_3 Plasmid maintenance system killer - - - 0.00000000000000000000000000000000008749 136.0
PJS1_k127_1438034_0 accessory protein K06959 - - 0.0 1497.0
PJS1_k127_1438034_1 Histidine kinase K20974 - 2.7.13.3 0.0 1470.0
PJS1_k127_1438034_10 Histidine kinase K07640 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004533 379.0
PJS1_k127_1438034_11 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K08312 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 375.0
PJS1_k127_1438034_12 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 288.0
PJS1_k127_1438034_13 Belongs to the HSP15 family K04762 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 279.0
PJS1_k127_1438034_14 Effector of murein hydrolase LrgA K05338,K06518 GO:0000270,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0006810,GO:0008104,GO:0008150,GO:0008152,GO:0008565,GO:0009056,GO:0009057,GO:0009253,GO:0015031,GO:0015833,GO:0016020,GO:0030203,GO:0033036,GO:0042886,GO:0043170,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000001156 184.0
PJS1_k127_1438034_15 - - - - 0.0000003845 56.0
PJS1_k127_1438034_2 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 0.0 1054.0
PJS1_k127_1438034_3 Malate dehydrogenase K00027,K00029 - 1.1.1.38,1.1.1.40 2.867e-266 823.0
PJS1_k127_1438034_4 AI-2E family transporter - - - 1.592e-199 624.0
PJS1_k127_1438034_5 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 550.0
PJS1_k127_1438034_6 Histidine kinase K07640 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 474.0
PJS1_k127_1438034_7 hydrolase K20881 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005684 457.0
PJS1_k127_1438034_8 transcriptional regulator K07662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 452.0
PJS1_k127_1438034_9 effector of murein hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 424.0
PJS1_k127_1445254_0 Bacterial SH3 domain homologues K07184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 406.0
PJS1_k127_1445254_1 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 387.0
PJS1_k127_1445254_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000001558 264.0
PJS1_k127_1445254_3 protein conserved in bacteria K07401 - - 0.0000000000000000000000000000000000000000000000000000000000000000018 226.0
PJS1_k127_1445254_4 YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the K09780 - - 0.0000000000000000000000000000000000000000000000000000000001618 205.0
PJS1_k127_1445609_0 methyl-accepting chemotaxis protein K03406 - - 1.601e-296 915.0
PJS1_k127_1445609_1 Aldo keto reductase - - - 1.494e-226 702.0
PJS1_k127_1445609_2 COG1305 Transglutaminase-like enzymes K22452 - 2.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009185 570.0
PJS1_k127_1445609_3 belongs to the thioredoxin family K03671,K05838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 344.0
PJS1_k127_1445609_4 MOSC domain - - - 0.000000000000000000000000000000000000000000000000000000002389 200.0
PJS1_k127_1451415_0 Serine Threonine protein K20074 - 3.1.3.16 0.0 1062.0
PJS1_k127_1451415_1 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 1.684e-274 844.0
PJS1_k127_1451415_2 Formate/nitrite transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 524.0
PJS1_k127_1451415_3 IG-like fold at C-terminal of FixG, putative oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 523.0
PJS1_k127_1451415_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000001517 94.0
PJS1_k127_1451842_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1964.0
PJS1_k127_1451842_1 PFAM Chemotaxis methyl-accepting receptor, signalling K03406 - - 2.271e-281 871.0
PJS1_k127_1451842_2 Outer membrane efflux protein - - - 1.755e-262 811.0
PJS1_k127_1451842_3 2OG-Fe(II) oxygenase K07394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007294 433.0
PJS1_k127_1451842_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002834 273.0
PJS1_k127_1451842_5 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006628 254.0
PJS1_k127_1451842_7 Invasion gene expression up-regulator - - - 0.000000000000000000000000000000000000000000000000000003291 192.0
PJS1_k127_1451842_8 membrane - - - 0.00000000000000000000000000000000000000000004973 160.0
PJS1_k127_1456000_0 Methionine synthase K00548 - 2.1.1.13 0.0 1448.0
PJS1_k127_1456000_1 Na -driven multidrug efflux pump - - - 1.905e-226 703.0
PJS1_k127_1457270_0 belongs to the glycosyl hydrolase 13 family - - - 0.0 1395.0
PJS1_k127_1457270_1 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 1.396e-230 714.0
PJS1_k127_146058_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1178.0
PJS1_k127_146058_1 Member of the two-component regulatory system ZraS ZraR. May function as a membrane-associated protein kinase that phosphorylates ZraR in response to high concentrations of zinc or lead in the medium - - - 4.838e-305 939.0
PJS1_k127_146058_2 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002182 231.0
PJS1_k127_1483915_0 Putative diguanylate phosphodiesterase - - - 0.0 1249.0
PJS1_k127_1483915_1 HipA N-terminal domain K07154 - 2.7.11.1 1.167e-263 814.0
PJS1_k127_1483915_2 fatty acid desaturase K00508 - 1.14.19.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 345.0
PJS1_k127_1483915_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 308.0
PJS1_k127_1483915_4 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000002209 221.0
PJS1_k127_1483915_5 Protein of unknown function (DUF2789) - - - 0.000000000000000001357 87.0
PJS1_k127_1492219_0 P-type ATPase K01533 - 3.6.3.4 7.144e-321 987.0
PJS1_k127_1492219_1 COG0348 Polyferredoxin - - - 4.506e-316 967.0
PJS1_k127_1492219_2 protein conserved in bacteria K09926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000646 313.0
PJS1_k127_1492219_3 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000001445 87.0
PJS1_k127_1500475_0 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 568.0
PJS1_k127_1500475_1 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 536.0
PJS1_k127_1500475_2 transcriptional regulator K07662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004848 448.0
PJS1_k127_1500475_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000000000000000000729 228.0
PJS1_k127_1500475_4 Late competence development protein ComFB - - - 0.000000000000000000000000000000000000000000000000000001198 193.0
PJS1_k127_1501128_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 1.01e-284 875.0
PJS1_k127_1501128_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 447.0
PJS1_k127_1501128_2 Preprotein translocase subunit SecG K03075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004273 241.0
PJS1_k127_1501128_3 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15 0.000000000000000000000000000000000005087 140.0
PJS1_k127_1503696_0 Nitrate and nitrite sensing - - - 0.0 1046.0
PJS1_k127_1503696_1 Histidine kinase - - - 3.356e-282 883.0
PJS1_k127_1503696_2 Carboxylesterase K06999 - - 0.00000000000000000000000000000002023 126.0
PJS1_k127_1576496_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.276e-266 822.0
PJS1_k127_1576496_1 COG2303 Choline dehydrogenase and related flavoproteins K03333 - 1.1.3.6 1.695e-232 719.0
PJS1_k127_1576615_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 0.0 1009.0
PJS1_k127_1576615_1 type II secretion system protein K02653 - - 4.553e-239 742.0
PJS1_k127_1576615_2 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000002326 218.0
PJS1_k127_1580025_0 Trk system potassium uptake protein K03498 - - 4.397e-314 963.0
PJS1_k127_1580025_1 Sulfate permease and related transporters (MFS superfamily) K03321 - - 5.665e-306 940.0
PJS1_k127_1580025_2 found to be peripherally associated with the inner membrane in Escherichia coli K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005741 567.0
PJS1_k127_1580025_3 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 531.0
PJS1_k127_1580025_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 376.0
PJS1_k127_1580025_5 Putative zinc-finger - - - 0.000000000000000000000344 96.0
PJS1_k127_1581456_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 1.921e-292 899.0
PJS1_k127_1581456_2 Transcription factor K18850 - 1.14.11.47 1.779e-261 805.0
PJS1_k127_1581456_3 COG0720 6-pyruvoyl-tetrahydropterin synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 536.0
PJS1_k127_1581456_4 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003812 508.0
PJS1_k127_1581456_5 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 496.0
PJS1_k127_1581456_6 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 369.0
PJS1_k127_1581456_8 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000000000000000000000002126 129.0
PJS1_k127_1593981_0 Reduces the stability of FtsZ polymers in the presence of ATP K06916 - - 9.628e-238 736.0
PJS1_k127_1593981_1 Sulfate adenylyltransferase subunit 2 K00957 - 2.7.7.4 1.962e-200 625.0
PJS1_k127_1593981_2 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008302 475.0
PJS1_k127_1593981_3 Fungal family of unknown function (DUF1776) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 463.0
PJS1_k127_1593981_4 hydrolase of the alpha beta superfamily K07018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004914 430.0
PJS1_k127_1593981_5 Bacterial protein of unknown function (Gcw_chp) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 320.0
PJS1_k127_1615482_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 1.029e-256 793.0
PJS1_k127_1615482_1 Histidine-specific methyltransferase, SAM-dependent - - - 1.203e-194 609.0
PJS1_k127_1615482_2 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 469.0
PJS1_k127_1615482_3 Domain of unknown function (DUF4328) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 401.0
PJS1_k127_1622337_0 ImcF-related N-terminal domain K11891 - - 0.0 2266.0
PJS1_k127_1622337_1 Uncharacterized protein conserved in bacteria (DUF2094) K11890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 460.0
PJS1_k127_1622337_2 ImpA, N-terminal, type VI secretion system K11902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 297.0
PJS1_k127_1646865_0 esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007868 437.0
PJS1_k127_1646865_1 Membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001182 281.0
PJS1_k127_1646865_2 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001744 245.0
PJS1_k127_1646865_3 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001643 239.0
PJS1_k127_1646865_4 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000006925 229.0
PJS1_k127_1646865_5 Steryl acetyl hydrolase K14731 - 3.1.1.83 0.0000000000000000000000000000000000000000000003107 180.0
PJS1_k127_1646865_6 KR domain - - - 0.00000000000000000000000000000000000003488 154.0
PJS1_k127_1646865_7 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000001476 138.0
PJS1_k127_1646865_8 Protein of unknown function (DUF1298) - - - 0.000000000000000001844 87.0
PJS1_k127_1646865_9 - - - - 0.00000000002165 66.0
PJS1_k127_1646976_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 7.794e-296 908.0
PJS1_k127_1646976_1 Flagellar motor protein K02557 - - 1.196e-199 623.0
PJS1_k127_1646976_10 Multiple resistance and pH regulation protein F (MrpF / PhaF) K05563 - - 0.0000000000000000000000003725 107.0
PJS1_k127_1646976_2 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 484.0
PJS1_k127_1646976_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 423.0
PJS1_k127_1646976_4 MotA TolQ ExbB proton channel K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 415.0
PJS1_k127_1646976_5 PilZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 346.0
PJS1_k127_1646976_6 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 286.0
PJS1_k127_1646976_7 Na H antiporter K05564 - - 0.0000000000000000000000000000000000000000000000000000000000000000002118 230.0
PJS1_k127_1646976_8 antiporter K05562 - - 0.00000000000000000000000000000000000000000000000004519 178.0
PJS1_k127_1646976_9 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000000000000000000000002276 142.0
PJS1_k127_1690810_0 Adenylate cyclase, class-I K05851 - 4.6.1.1 0.0 1800.0
PJS1_k127_1690810_1 chemotaxis protein K02660 - - 9.179e-284 875.0
PJS1_k127_1690810_10 response regulator K02657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007639 268.0
PJS1_k127_1690810_11 Response regulator receiver domain K02658 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008692 251.0
PJS1_k127_1690810_12 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000000000000000000000001816 200.0
PJS1_k127_1690810_2 Dihydroorotase multifunctional complex type K01465 - 3.5.2.3 2.72e-266 822.0
PJS1_k127_1690810_3 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 1.203e-207 646.0
PJS1_k127_1690810_4 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 9.247e-199 620.0
PJS1_k127_1690810_5 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 4.464e-195 610.0
PJS1_k127_1690810_6 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005414 544.0
PJS1_k127_1690810_7 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 385.0
PJS1_k127_1690810_8 Two component signalling adaptor domain K02659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009531 352.0
PJS1_k127_1690810_9 uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 334.0
PJS1_k127_1722969_0 mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth K15738 - - 2.121e-319 980.0
PJS1_k127_1722969_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 329.0
PJS1_k127_1724411_0 peptidase M42 - - - 2.005e-230 713.0
PJS1_k127_1724411_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 4.674e-221 689.0
PJS1_k127_1724411_2 Paraquat-inducible protein A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002336 241.0
PJS1_k127_1724411_4 peptidyl-prolyl cis-trans isomerase activity K01802,K03769,K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000006598 211.0
PJS1_k127_1748953_0 COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 0.0 1034.0
PJS1_k127_1748953_1 Type II secretory pathway, component PulF K02653 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009297,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0032940,GO:0033036,GO:0042886,GO:0043711,GO:0044085,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0098776 - 5.318e-220 687.0
PJS1_k127_1748953_2 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02464,K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 457.0
PJS1_k127_1748953_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000003942 236.0
PJS1_k127_1748953_4 Belongs to the N-Me-Phe pilin family K02650 - - 0.000000000000000000000000000000000000003095 150.0
PJS1_k127_1754637_0 COG1233 Phytoene dehydrogenase and related proteins K09516 - 1.3.99.23 0.0 1115.0
PJS1_k127_1754637_1 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 595.0
PJS1_k127_1754637_2 Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 504.0
PJS1_k127_1754637_4 Metal-dependent hydrolase K07043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 349.0
PJS1_k127_1754637_5 Phosphate-starvation-inducible E - - - 0.000000000000000000000000000000000000000006782 155.0
PJS1_k127_1770906_0 Putative diguanylate phosphodiesterase - - - 1.568e-316 972.0
PJS1_k127_1770906_1 oxidase, subunit K00425 - 1.10.3.14 3.096e-207 645.0
PJS1_k127_1777674_0 Imelysin K07231 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 490.0
PJS1_k127_1777674_1 Di-haem cytochrome c peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 417.0
PJS1_k127_1793986_0 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 - - 1.663e-265 821.0
PJS1_k127_1793986_1 type IV pilus modification protein PilV K02671 - - 0.0000000000000000000000000000000000007427 146.0
PJS1_k127_1793986_2 COG0642 Signal transduction histidine kinase K02668 - 2.7.13.3 0.0000000000000000000000000018 111.0
PJS1_k127_1793986_3 COG4970 Tfp pilus assembly protein FimT K08084 - - 0.0000000000001392 78.0
PJS1_k127_1793986_4 Type II transport protein GspH K08084 - - 0.000000000003965 72.0
PJS1_k127_1793986_5 Type IV Pilus-assembly protein W K02672 - - 0.00001675 55.0
PJS1_k127_1795180_0 COG2015 Alkyl sulfatase and related hydrolases - - - 1.063e-237 744.0
PJS1_k127_1795180_1 Protein of unknown function (DUF3604) - - - 0.000000000000000034 82.0
PJS1_k127_1795180_2 Protein of unknown function (DUF1214) - - - 0.0003847 46.0
PJS1_k127_1814481_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0 1491.0
PJS1_k127_1814481_1 Bile acid sodium symporter K03453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 570.0
PJS1_k127_1814481_2 Iron transporter FeoA K04758 - - 0.0000000000000000000000000000000588 124.0
PJS1_k127_1814481_3 Protein of unknown function (DUF1439) - - - 0.00000000000000002702 84.0
PJS1_k127_1841545_0 intracellular protease amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 416.0
PJS1_k127_1841545_1 Pfam:DUF385 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001332 262.0
PJS1_k127_1841545_2 - - - - 0.000000000000000000000000000000000000005074 148.0
PJS1_k127_1848214_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 5.037e-213 662.0
PJS1_k127_1848214_1 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0016874,GO:0016879,GO:0016979,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0019752,GO:0032787,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048519,GO:0050789,GO:0051186,GO:0051188,GO:0051604,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000001762 213.0
PJS1_k127_1848214_2 Protein of unknown function (DUF465) K09794 - - 0.00000000000000000000000000000000000000005672 152.0
PJS1_k127_1848214_3 response regulator - - - 0.0000000001244 62.0
PJS1_k127_1860491_0 Transglutaminase-like superfamily - - - 0.0 1206.0
PJS1_k127_1860491_1 protein (some members contain a von Willebrand factor type A (vWA) domain K02034,K13891 - - 4.159e-215 668.0
PJS1_k127_1886033_0 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0 1543.0
PJS1_k127_1886033_1 secretion pathway protein K02453 - - 0.0 1169.0
PJS1_k127_1886033_10 chain release factor K15034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001321 262.0
PJS1_k127_1886033_11 PFAM Excinuclease ABC, C subunit K07461 - - 0.000000000000000000000000000000000000000000005846 165.0
PJS1_k127_1886033_2 phosphotransferase related to Ser Thr protein K07102 - 2.7.1.221 7.222e-216 671.0
PJS1_k127_1886033_3 Type II secretion system protein C K02452 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005338 533.0
PJS1_k127_1886033_4 Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host K05801 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 511.0
PJS1_k127_1886033_5 Type II secretion system (T2SS), protein N K02463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006302 482.0
PJS1_k127_1886033_6 hemolysin III K11068 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 444.0
PJS1_k127_1886033_7 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007335 404.0
PJS1_k127_1886033_8 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0022607,GO:0030288,GO:0030313,GO:0031647,GO:0031975,GO:0033218,GO:0036211,GO:0042277,GO:0042597,GO:0043163,GO:0043165,GO:0043170,GO:0043412,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0044764,GO:0045229,GO:0050821,GO:0051082,GO:0051084,GO:0051085,GO:0051704,GO:0060274,GO:0061024,GO:0061077,GO:0065007,GO:0065008,GO:0071704,GO:0071709,GO:0071840,GO:0140096,GO:1901564 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 319.0
PJS1_k127_1886033_9 Maf-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003168 265.0
PJS1_k127_1903661_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0 1275.0
PJS1_k127_1903661_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0036094,GO:0043021,GO:0043024,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0 1059.0
PJS1_k127_1903661_2 Participates in both transcription termination and antitermination K02600 GO:0001000,GO:0001121,GO:0001125,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 2.758e-299 921.0
PJS1_k127_1903661_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0031119,GO:0034337,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004065 491.0
PJS1_k127_1903661_4 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005257 278.0
PJS1_k127_1903661_5 Protein of unknown function (DUF3015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001291 274.0
PJS1_k127_1903661_6 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0033554,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000001897 233.0
PJS1_k127_1903661_7 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000001315 173.0
PJS1_k127_1903661_8 Domain of unknown function (DUF4105) - - - 0.00000000000000000006045 94.0
PJS1_k127_1906786_0 Histidine kinase - - - 0.0 1178.0
PJS1_k127_1906786_1 Belongs to the peptidase M16 family - - - 1.961e-319 979.0
PJS1_k127_1906786_2 EAL domain - GO:0000302,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008081,GO:0008150,GO:0009628,GO:0009636,GO:0009987,GO:0010035,GO:0016020,GO:0016021,GO:0016787,GO:0016788,GO:0031224,GO:0033554,GO:0034059,GO:0034599,GO:0034614,GO:0035690,GO:0036293,GO:0036294,GO:0042221,GO:0042493,GO:0042542,GO:0042578,GO:0043900,GO:0044425,GO:0044464,GO:0046677,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070301,GO:0070482,GO:0070887,GO:0071111,GO:0071236,GO:0071453,GO:0071454,GO:0071944,GO:0097237,GO:1900190,GO:1901700,GO:1901701 - 1.293e-262 822.0
PJS1_k127_1906786_3 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 372.0
PJS1_k127_1913851_0 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.0 1100.0
PJS1_k127_1913851_1 Serine aminopeptidase, S33 - - - 1.551e-201 627.0
PJS1_k127_1913851_2 Periplasmic binding protein domain K10439 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005588 585.0
PJS1_k127_1913851_3 RNA pseudouridylate synthase K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 564.0
PJS1_k127_1913851_4 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 437.0
PJS1_k127_1914764_0 Biotin carboxylase - - - 0.0 2179.0
PJS1_k127_1914764_1 catalyzes a condensation reaction in fatty acid biosynthesis addition of an acyl acceptor of two carbons from malonyl-ACP K00647 - 2.3.1.41 3.491e-252 779.0
PJS1_k127_1914764_2 Acid phosphatase homologues - - - 0.00000000000000000000000000000000000000000000000000005904 187.0
PJS1_k127_1922616_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 2582.0
PJS1_k127_1922616_1 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 3.562e-299 920.0
PJS1_k127_1922616_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 499.0
PJS1_k127_1922616_3 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007303 319.0
PJS1_k127_1922616_4 Thioesterase K07107 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001708 269.0
PJS1_k127_1922616_5 protein conserved in bacteria K09803 - - 0.00000000000000000000000001723 111.0
PJS1_k127_1922616_6 BrnA antitoxin of type II toxin-antitoxin system K03179 - 2.5.1.39 0.00000000000000000000000003367 109.0
PJS1_k127_1922616_7 - - - - 0.0000000000000000000000002566 109.0
PJS1_k127_1922616_8 - - - - 0.000000000000000001437 89.0
PJS1_k127_193853_0 membrane K07058 - - 4.033e-211 659.0
PJS1_k127_193853_1 Belongs to the WrbA family K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 374.0
PJS1_k127_193853_2 Nucleoside 2-deoxyribosyltransferase YtoQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004691 295.0
PJS1_k127_193853_3 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000002114 237.0
PJS1_k127_193853_4 arsenate reductase K00537 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000000003082 221.0
PJS1_k127_193853_5 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000004316 169.0
PJS1_k127_193853_6 - - - - 0.0000000000000000000000000000000000000000000008543 165.0
PJS1_k127_1964199_0 Thrombospondin type 3 repeat - - - 0.0 1252.0
PJS1_k127_1964199_1 COG0457 FOG TPR repeat - - - 1.135e-203 639.0
PJS1_k127_1964199_2 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 568.0
PJS1_k127_1964199_3 - - - - 0.0000000000000000000000000000000000000000000000000000001809 198.0
PJS1_k127_1968049_0 highly regulated protein controlled by the addition removal of adenylyl groups by adenylyltransferase from specific tyrosine residues K01915 - 6.3.1.2 8.359e-260 800.0
PJS1_k127_1968049_1 COG2267 Lysophospholipase K01048 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 605.0
PJS1_k127_1968049_2 EVE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 308.0
PJS1_k127_1968049_3 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000355 259.0
PJS1_k127_1969744_0 ErfK YbiS YcfS YnhG family protein K21470 - - 0.0 1169.0
PJS1_k127_1969744_1 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000713 514.0
PJS1_k127_1969744_2 Bacterial protein of unknown function (DUF882) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009035 278.0
PJS1_k127_1969744_3 membrane transporter protein K07090 - - 0.00000000000000000000005606 98.0
PJS1_k127_1989811_0 COG4962 Flp pilus assembly protein, ATPase CpaF K02283 - - 5.912e-205 652.0
PJS1_k127_1989811_1 Type II secretion system (T2SS), protein F K12511 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009595 310.0
PJS1_k127_1989811_2 Type II secretion system (T2SS), protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001533 248.0
PJS1_k127_1989811_3 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000078 244.0
PJS1_k127_1989811_4 PFAM TadE family protein - - - 0.00000000000000000000000000000000000007779 152.0
PJS1_k127_1989811_5 chlorophyll binding - - - 0.0000000000000000000001361 107.0
PJS1_k127_1989811_6 TPR repeat - - - 0.0000000009447 65.0
PJS1_k127_1989811_7 PFAM TadE family protein - - - 0.00000004483 60.0
PJS1_k127_1989811_8 Flp pilus assembly protein CpaB K02279 - - 0.00000004592 62.0
PJS1_k127_2017743_0 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 - 2.3.3.9 0.0 1470.0
PJS1_k127_2025976_0 COG2207 AraC-type DNA-binding domain-containing proteins - - - 1.649e-221 688.0
PJS1_k127_2025976_2 Protein of unknown function, DUF481 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000945 489.0
PJS1_k127_2025976_3 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 289.0
PJS1_k127_2025976_4 Flavodoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 281.0
PJS1_k127_2028081_0 7TMR-DISM extracellular 2 - - - 0.0 1078.0
PJS1_k127_2028081_1 transcriptional regulator AraC family - - - 1.256e-223 693.0
PJS1_k127_2028081_2 fatty acid desaturase - - - 1.072e-216 674.0
PJS1_k127_2028081_3 growth - - - 0.0000000000000000000000000000000000000001225 152.0
PJS1_k127_2028081_4 COG2070 Dioxygenases related to 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.000000000000000001844 87.0
PJS1_k127_202902_0 Xanthine dehydrogenase K13482 - 1.17.1.4 0.0 1559.0
PJS1_k127_202902_1 ABC transporter K02056 - 3.6.3.17 5e-323 990.0
PJS1_k127_202902_10 Xanthine dehydrogenase K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006738 277.0
PJS1_k127_202902_11 Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily K07127 - 3.5.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000002384 244.0
PJS1_k127_202902_2 Xanthine dehydrogenase K13481 - 1.17.1.4 2.975e-312 957.0
PJS1_k127_202902_3 Guanine deaminase K01487 - 3.5.4.3 1.885e-285 877.0
PJS1_k127_202902_4 membrane - - - 6.01e-262 807.0
PJS1_k127_202902_5 Belongs to the binding-protein-dependent transport system permease family K02057 - - 2.128e-224 696.0
PJS1_k127_202902_6 Belongs to the allantoicase family K01477 - 3.5.3.4 6.498e-223 691.0
PJS1_k127_202902_7 Allantoinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004938 473.0
PJS1_k127_202902_8 Ureidoglycolate lyase K01483 - 4.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 339.0
PJS1_k127_202902_9 OHCU decarboxylase K16840 - 4.1.1.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 334.0
PJS1_k127_2041805_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 3.679e-277 852.0
PJS1_k127_2041805_1 Cytochrome c1 K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 522.0
PJS1_k127_2041805_2 Stringent starvation protein A K03599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008806 421.0
PJS1_k127_2041805_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 411.0
PJS1_k127_2041805_4 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 299.0
PJS1_k127_2041805_5 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002634 253.0
PJS1_k127_2059960_0 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007021 508.0
PJS1_k127_2059960_1 of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 350.0
PJS1_k127_2059960_2 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002674 293.0
PJS1_k127_2059960_3 COG1846 Transcriptional regulators - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000538 287.0
PJS1_k127_2059960_4 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007695 278.0
PJS1_k127_2059960_5 metal-binding protein - - - 0.0000000000000000000000000000000000000000000000000001261 191.0
PJS1_k127_2066206_0 flavoprotein involved in K transport - - - 1.717e-317 974.0
PJS1_k127_2066206_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 8.776e-264 816.0
PJS1_k127_2066206_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 559.0
PJS1_k127_2066206_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 520.0
PJS1_k127_2066206_4 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 287.0
PJS1_k127_2066206_6 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000002378 211.0
PJS1_k127_2066206_7 cellular response to heat K09807 - - 0.0000000000000000000000000000000000000000000000000000003484 194.0
PJS1_k127_2066206_8 protein conserved in bacteria - - - 0.00000000000000000000000000000000000002451 147.0
PJS1_k127_2084933_0 helix_turn_helix, arabinose operon control protein K04033 - - 1.241e-199 623.0
PJS1_k127_2084933_1 With EutC catalyzes the formation of acetaldehyde and ammonia from ethanolamine K03735 - 4.3.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 357.0
PJS1_k127_2088149_0 transport system, large permease component - - - 0.0 1297.0
PJS1_k127_2088149_1 oxidoreductase activity K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007381 478.0
PJS1_k127_2088149_2 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000006867 174.0
PJS1_k127_2096957_0 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 0.0 996.0
PJS1_k127_2096957_1 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 559.0
PJS1_k127_2096957_2 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 424.0
PJS1_k127_2096957_3 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 392.0
PJS1_k127_2096957_4 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000000000000006623 190.0
PJS1_k127_2096957_5 Cbb3-type cytochrome oxidase K00407 - - 0.0000000000000000000000000000002343 123.0
PJS1_k127_2096957_6 WYL domain - - - 0.00000000002146 64.0
PJS1_k127_2097433_0 AraC family transcriptional regulator - - - 8.394e-204 636.0
PJS1_k127_2097433_1 GGDEF domain - - - 9.416e-201 626.0
PJS1_k127_2097433_2 Acyl-CoA thioesterase K01073 - 3.1.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006832 509.0
PJS1_k127_2097433_3 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004538 409.0
PJS1_k127_2097433_4 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 405.0
PJS1_k127_2097433_5 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 312.0
PJS1_k127_2097433_6 protein, possibly involved in aromatic compounds catabolism - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006135 292.0
PJS1_k127_2097433_7 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000337 252.0
PJS1_k127_2106563_0 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000094 534.0
PJS1_k127_2106563_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 488.0
PJS1_k127_2106563_2 OsmC-like protein K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000504 279.0
PJS1_k127_2127046_0 With GlrK is part of a two-component signal transduction system regulating glmY K07715 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 466.0
PJS1_k127_2127046_1 Transcriptional regulator K07109 - - 0.00000000000000000000000000000000000000000000000000000000000000003673 228.0
PJS1_k127_2127046_2 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000007709 218.0
PJS1_k127_2127046_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000002342 75.0
PJS1_k127_214166_0 Glycosyltransferase family 20 - - - 0.0 1129.0
PJS1_k127_214166_1 Alpha amylase, catalytic domain K00690 - 2.4.1.7 5.18e-319 977.0
PJS1_k127_214166_2 malate quinone oxidoreductase K00116 - 1.1.5.4 1.101e-315 968.0
PJS1_k127_214166_3 PFAM Chemotaxis methyl-accepting receptor, signalling K03406 - - 3.693e-294 909.0
PJS1_k127_214166_4 Major facilitator superfamily - - - 1.97e-234 730.0
PJS1_k127_214166_5 protein conserved in bacteria K00243 - - 1.785e-223 698.0
PJS1_k127_214166_6 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 330.0
PJS1_k127_214166_7 PFAM Glycosyl transferase, family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.000000000000000000000000000000000000000009757 162.0
PJS1_k127_2141722_0 Serine Threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 533.0
PJS1_k127_2141722_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 368.0
PJS1_k127_2151007_0 Oxygen tolerance - - - 0.0 1085.0
PJS1_k127_2151007_1 Predicted permease K07089 - - 2.505e-203 634.0
PJS1_k127_2151007_2 Bacterial Ig-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008659 434.0
PJS1_k127_2151007_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004319 309.0
PJS1_k127_2151007_4 COG3047 Outer membrane protein W - - - 0.00000000000000000000000000000000000000000000000000000181 201.0
PJS1_k127_2151007_5 Thioredoxin domain - - - 0.0000000000000000000000000000000000000001292 150.0
PJS1_k127_2151007_6 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000004506 84.0
PJS1_k127_2151007_8 NADPH-dependent FMN reductase - - - 0.000003899 48.0
PJS1_k127_2162251_0 belongs to the CobB CobQ family K13788 - 2.3.1.8 0.0 1353.0
PJS1_k127_2162251_1 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 2.534e-292 897.0
PJS1_k127_2162251_10 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000038 363.0
PJS1_k127_2162251_11 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 328.0
PJS1_k127_2162251_12 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005109 327.0
PJS1_k127_2162251_13 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001003 284.0
PJS1_k127_2162251_15 COG3145 Alkylated DNA repair protein - - - 0.000000000000000000000000000000000000000000000000000003902 196.0
PJS1_k127_2162251_16 - - - - 0.00000000000000000000000000000000000000000000000000000832 192.0
PJS1_k127_2162251_17 Redoxin - - - 0.00000000000000000000952 99.0
PJS1_k127_2162251_2 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 2.806e-195 610.0
PJS1_k127_2162251_3 Acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 602.0
PJS1_k127_2162251_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009642 587.0
PJS1_k127_2162251_5 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 581.0
PJS1_k127_2162251_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 512.0
PJS1_k127_2162251_7 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K03796 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 464.0
PJS1_k127_2203089_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 3.445e-257 794.0
PJS1_k127_2203089_1 Tfp pilus assembly protein K08086 - - 6.464e-245 763.0
PJS1_k127_2203089_2 COG2207 AraC-type DNA-binding domain-containing proteins - - - 1.24e-203 638.0
PJS1_k127_2203089_3 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 606.0
PJS1_k127_2203089_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 573.0
PJS1_k127_2203089_5 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 355.0
PJS1_k127_2203089_6 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000001167 250.0
PJS1_k127_221387_0 methyl-accepting chemotaxis protein - - - 2.25e-304 938.0
PJS1_k127_221387_1 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 1.926e-278 858.0
PJS1_k127_221387_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 1.926e-276 851.0
PJS1_k127_221387_3 glycosyl transferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 591.0
PJS1_k127_221387_4 part of a sulfur-relay system K11179 - - 0.00000000000000000000000000000000000000000000000000000000001802 206.0
PJS1_k127_221387_5 tRNA wobble position uridine thiolation K07237 GO:0002097,GO:0002098,GO:0002143,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1902494,GO:1990228,GO:1990234 - 0.000000000000000000000000000000000000000000002103 166.0
PJS1_k127_221387_6 tRNA processing K07236 GO:0002097,GO:0002098,GO:0002143,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1902494,GO:1990228,GO:1990234 - 0.0000000000000002048 78.0
PJS1_k127_2216092_0 COG1960 Acyl-CoA dehydrogenases - - - 0.0 1219.0
PJS1_k127_2216092_1 Histidine kinase K10909 - 2.7.13.3 0.0 1040.0
PJS1_k127_2216092_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 1.289e-292 900.0
PJS1_k127_2216092_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003831 462.0
PJS1_k127_2216092_4 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 454.0
PJS1_k127_2216092_5 catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 366.0
PJS1_k127_2216092_6 diguanylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 368.0
PJS1_k127_2216092_7 Outer membrane protein W K07275 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 362.0
PJS1_k127_2236749_0 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 462.0
PJS1_k127_2236749_1 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 368.0
PJS1_k127_2236749_2 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964,K22130 - 4.1.1.104,4.2.1.109 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005289 284.0
PJS1_k127_2236749_3 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000001876 183.0
PJS1_k127_2236749_4 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000001198 156.0
PJS1_k127_2244166_0 Double sensory domain of two-component sensor kinase - - - 0.0 1398.0
PJS1_k127_2244166_1 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.0 1160.0
PJS1_k127_2244166_2 Sodium:solute symporter family K14393 - - 6.626e-262 814.0
PJS1_k127_2244166_3 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 415.0
PJS1_k127_2244166_4 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 363.0
PJS1_k127_2244166_5 Protein of unknown function, DUF485 - - - 0.000000000000000000000000000000000000000000000000000006706 191.0
PJS1_k127_2244166_6 PAS fold - - - 0.0000000000000000000000000000001465 123.0
PJS1_k127_224563_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0 1125.0
PJS1_k127_224563_1 Histidine kinase-like ATPases - - - 3.952e-233 724.0
PJS1_k127_224563_2 Transcriptional K03719 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 326.0
PJS1_k127_2266595_0 Dicarboxylate transport - - - 0.0 1697.0
PJS1_k127_2266595_1 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 442.0
PJS1_k127_2266595_2 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007812 428.0
PJS1_k127_2266595_3 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000598 388.0
PJS1_k127_2268613_0 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 4.675e-305 935.0
PJS1_k127_2268613_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 1.679e-209 652.0
PJS1_k127_2268613_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 572.0
PJS1_k127_2268613_3 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005379 538.0
PJS1_k127_2268613_5 transport system, large permease component - - - 0.0000000000000000000000000000000001106 134.0
PJS1_k127_2272334_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.0 1120.0
PJS1_k127_2272334_1 ATPases involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 452.0
PJS1_k127_2272334_2 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 303.0
PJS1_k127_2272334_3 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002092 277.0
PJS1_k127_2273841_0 FAD dependent oxidoreductase K15736 - - 1.346e-202 636.0
PJS1_k127_2273841_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003236 544.0
PJS1_k127_2273841_2 TetR family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009484 393.0
PJS1_k127_2305430_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 0.0 1499.0
PJS1_k127_2305430_1 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 364.0
PJS1_k127_2305430_2 phosphoserine phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 343.0
PJS1_k127_2321728_0 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007068 568.0
PJS1_k127_2321728_1 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 484.0
PJS1_k127_2321728_2 Haem-NO-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003199 317.0
PJS1_k127_2321728_3 ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001669 246.0
PJS1_k127_2324321_0 PhzC PhzF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 506.0
PJS1_k127_2324321_2 beta-lactamase K07576 - - 0.0000000000000000000000000000000000000000000000000000000005963 201.0
PJS1_k127_2324321_3 Subtilase family K14645 - - 0.0000000000000000000000000000000000000000006925 158.0
PJS1_k127_2325919_0 protein involved in exopolysaccharide biosynthesis K16554 - - 0.0 1099.0
PJS1_k127_2331710_0 chlorophyll binding - - - 0.0 1085.0
PJS1_k127_2331710_1 Outer membrane efflux protein - - - 1.333e-284 878.0
PJS1_k127_2331710_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 2.504e-221 688.0
PJS1_k127_2331710_3 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 361.0
PJS1_k127_2331710_4 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 353.0
PJS1_k127_2331710_5 polysaccharide biosynthetic process - - - 0.000000000000000000000000000000000000000334 149.0
PJS1_k127_2345299_0 Cytochrome c - - - 0.0 1064.0
PJS1_k127_2345299_1 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 3.1e-322 992.0
PJS1_k127_2345299_2 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 7.473e-297 911.0
PJS1_k127_2345299_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 367.0
PJS1_k127_2345299_5 Bacterial protein of unknown function (DUF839) K07093 - - 0.000000000000000000000000000000000002644 139.0
PJS1_k127_2345299_6 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000004769 93.0
PJS1_k127_2347008_0 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 334.0
PJS1_k127_2347008_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 316.0
PJS1_k127_2347008_2 Protein of unknown function (DUF1298) - - - 0.00000000000000000000006806 102.0
PJS1_k127_2347973_0 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 3.429e-242 751.0
PJS1_k127_2347973_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 1.865e-240 746.0
PJS1_k127_2347973_2 protein containing LysM domain - - - 2.165e-222 690.0
PJS1_k127_2347973_3 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 1.291e-216 671.0
PJS1_k127_2347973_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 1.406e-194 608.0
PJS1_k127_2347973_5 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 390.0
PJS1_k127_2347973_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009979 370.0
PJS1_k127_2347973_7 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 347.0
PJS1_k127_2358825_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1410.0
PJS1_k127_2358825_1 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 2.147e-312 959.0
PJS1_k127_2358825_2 Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present K03657 - 3.6.4.12 8.248e-287 882.0
PJS1_k127_2358825_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 7.848e-268 825.0
PJS1_k127_2358825_4 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 1.926e-235 728.0
PJS1_k127_2358825_5 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 289.0
PJS1_k127_2358825_6 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000000000000002754 219.0
PJS1_k127_2360739_0 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases K01457 - 3.5.1.54 0.0 1154.0
PJS1_k127_2360739_1 Belongs to the binding-protein-dependent transport system permease family K11960 - - 1.908e-310 956.0
PJS1_k127_2360739_2 branched-chain amino acid K11959 - - 5.735e-289 887.0
PJS1_k127_2360739_3 Belongs to the binding-protein-dependent transport system permease family K11961 - - 6.07e-246 760.0
PJS1_k127_2360739_4 ABC transporter, ATP-binding protein K11962 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 514.0
PJS1_k127_2360739_5 ABC transporter ATP-binding protein K11963 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 456.0
PJS1_k127_2360739_6 FCD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005636 428.0
PJS1_k127_2360739_7 Bacterial protein of unknown function (Gcw_chp) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 315.0
PJS1_k127_2360739_8 long-chain fatty acid transporting porin activity K09806 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000002587 147.0
PJS1_k127_2360739_9 Belongs to the P(II) protein family K04751,K04752 - - 0.000000000000000000000001079 103.0
PJS1_k127_2387622_0 Na+/Pi-cotransporter K03324 - - 2.093e-309 950.0
PJS1_k127_2387622_1 Ion transporter K08714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 489.0
PJS1_k127_2401613_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 3.885e-255 788.0
PJS1_k127_2401613_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 542.0
PJS1_k127_2401613_2 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003257 268.0
PJS1_k127_2401613_3 Transcriptional regulator K05799 - - 0.00000000000000000000000000000000000000000000000000000000000000000003432 235.0
PJS1_k127_2401613_4 - - - - 0.0000000000000000000000000000000000000000000000000000000002673 203.0
PJS1_k127_2409476_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1494.0
PJS1_k127_2409476_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0 1277.0
PJS1_k127_2409476_10 Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (lauroyl)-lipid IV(A) K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006692 546.0
PJS1_k127_2409476_11 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007162 507.0
PJS1_k127_2409476_13 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 395.0
PJS1_k127_2409476_14 esterase K07000 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 355.0
PJS1_k127_2409476_15 protein conserved in bacteria K09920 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006805 305.0
PJS1_k127_2409476_16 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 305.0
PJS1_k127_2409476_2 Diguanylate cyclase - - - 0.0 1219.0
PJS1_k127_2409476_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 3.83e-297 914.0
PJS1_k127_2409476_4 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 1.748e-264 816.0
PJS1_k127_2409476_5 COG1538 Outer membrane protein K12340 - - 1.438e-220 692.0
PJS1_k127_2409476_6 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 1.116e-216 672.0
PJS1_k127_2409476_7 Alpha/beta hydrolase family - - - 2.191e-194 607.0
PJS1_k127_2409476_9 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 552.0
PJS1_k127_2433707_0 PrkA family serine protein kinase K07180 - - 0.0 1284.0
PJS1_k127_2433707_1 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009945 574.0
PJS1_k127_2433707_2 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 516.0
PJS1_k127_2433707_3 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006537 442.0
PJS1_k127_2433707_4 Belongs to the UPF0229 family K09786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 355.0
PJS1_k127_2433707_5 Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide K02439 - 2.8.1.1 0.0000000000000000000000000000000000000000000000000000000000004252 211.0
PJS1_k127_2433707_6 protein affecting Mg2 Co2 transport K06195 - - 0.00000000000000000000000000000000000001807 147.0
PJS1_k127_2435564_0 Universal stress protein family K14055 - - 5.066e-197 615.0
PJS1_k127_2435564_1 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 540.0
PJS1_k127_2435564_2 Phosphate acetyl/butaryl transferase K00625 - 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008109 445.0
PJS1_k127_2435564_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006883 332.0
PJS1_k127_243815_0 belongs to the aldehyde dehydrogenase family K22445 - 1.2.99.10 2.106e-234 726.0
PJS1_k127_243815_1 Putative amidoligase enzyme - - - 4.01e-198 619.0
PJS1_k127_243815_2 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008615 278.0
PJS1_k127_243815_3 glutamine amidotransferases K07010 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003629 273.0
PJS1_k127_243815_5 - - - - 0.000000000000976 71.0
PJS1_k127_2457041_0 Lamin Tail Domain K07004 - - 0.0 1284.0
PJS1_k127_2457041_1 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 531.0
PJS1_k127_2457041_2 Low-potential electron donor to a number of redox enzymes K03839,K03840 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 358.0
PJS1_k127_2457041_3 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001596 276.0
PJS1_k127_2457041_4 Binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009513 273.0
PJS1_k127_2457041_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000008247 228.0
PJS1_k127_2457041_7 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000004097 178.0
PJS1_k127_2457041_8 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000000000000000000000004874 157.0
PJS1_k127_2467350_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 1.426e-202 631.0
PJS1_k127_2467350_1 twitching motility protein K02670 - - 2.221e-202 630.0
PJS1_k127_2467350_2 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007779 342.0
PJS1_k127_2467350_3 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007118 320.0
PJS1_k127_2467350_4 Molybdenum cofactor biosynthesis protein K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009513 273.0
PJS1_k127_2467350_5 MobA-like NTP transferase domain K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000001344 263.0
PJS1_k127_2467350_6 Mo-molybdopterin cofactor metabolic process K03636,K03637,K03752,K21142 - 2.7.7.77,2.8.1.12,4.6.1.17 0.00000000000000000000000000000000000000002541 153.0
PJS1_k127_2473565_0 Cobalamin synthesis protein cobW C-terminal domain - - - 1.535e-201 629.0
PJS1_k127_2473565_1 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006431 541.0
PJS1_k127_2473565_2 PFAM NUDIX hydrolase K03426 - 3.6.1.22 0.000000000000000000000000000000000000000000000004429 171.0
PJS1_k127_2493024_0 DNA helicase K03657 - 3.6.4.12 0.0 1067.0
PJS1_k127_2493024_1 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 319.0
PJS1_k127_2532545_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1770.0
PJS1_k127_2532545_1 aminopeptidase N K01256 - 3.4.11.2 0.0 1707.0
PJS1_k127_2532545_11 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 384.0
PJS1_k127_2532545_13 Competence protein ComEA K02237 - - 0.00000000000000000000000000000000000000000002467 162.0
PJS1_k127_2532545_14 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K06191 - - 0.000000000000000000000000000000000000000008264 154.0
PJS1_k127_2532545_15 Domain of unknown function (DUF1853) K09977 - - 0.00000000000000000000000004887 119.0
PJS1_k127_2532545_16 protein conserved in bacteria K09916 - - 0.0000000000000005364 80.0
PJS1_k127_2532545_2 Diadenosine tetraphosphatase and related serine threonine protein - - - 7.328e-218 675.0
PJS1_k127_2532545_3 transcriptional regulator - - - 1.981e-213 663.0
PJS1_k127_2532545_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 600.0
PJS1_k127_2532545_5 Tfp pilus assembly protein FimV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 600.0
PJS1_k127_2532545_6 Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine K01505 - 3.5.99.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008394 565.0
PJS1_k127_2532545_7 Protein of unknown function (DUF2797) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 545.0
PJS1_k127_2532545_8 membrane protein (homolog of Drosophila rhomboid) K02441 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 526.0
PJS1_k127_2532545_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 472.0
PJS1_k127_2537660_0 Signal transduction histidine kinase - - - 0.0 1318.0
PJS1_k127_2537660_1 Periplasmic binding protein domain K01999,K11959 - - 1.922e-261 809.0
PJS1_k127_2537660_2 Belongs to the binding-protein-dependent transport system permease family K11961 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 608.0
PJS1_k127_2537660_3 Belongs to the binding-protein-dependent transport system permease family K11960 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 477.0
PJS1_k127_2537660_4 ABC-type transport system, ATPase component K11962 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 426.0
PJS1_k127_2537660_5 ABC transporter ATP-binding protein K11963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 364.0
PJS1_k127_2537660_6 Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates K01426,K01455 - 3.5.1.4,3.5.1.49 0.000000000001505 67.0
PJS1_k127_2549462_0 of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 588.0
PJS1_k127_2549462_1 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005927 400.0
PJS1_k127_2549462_2 LPP20 lipoprotein K09860 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 358.0
PJS1_k127_256471_0 Glycosyl transferase K13693 - 2.4.1.266 2.185e-269 829.0
PJS1_k127_256471_1 COG4240 Predicted kinase K15918 - 2.7.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 583.0
PJS1_k127_256471_2 COG1718 Serine threonine protein kinase involved in cell cycle control K07178 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 540.0
PJS1_k127_256471_3 Mannosyl-3-phosphoglycerate phosphatase K07026,K15918 - 2.7.1.31,3.1.3.70 0.00000000000000000000000000000000000000000000000000000000000000192 227.0
PJS1_k127_256471_4 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000001038 160.0
PJS1_k127_2568936_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0031224,GO:0031226,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051205,GO:0051234,GO:0051259,GO:0051260,GO:0051641,GO:0061024,GO:0065003,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 4.651e-278 864.0
PJS1_k127_2568936_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010556,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1990837,GO:2000112 - 2.658e-230 722.0
PJS1_k127_2568936_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 GO:0000166,GO:0001510,GO:0001882,GO:0001883,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006457,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009268,GO:0009451,GO:0009628,GO:0009636,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0030488,GO:0030955,GO:0031420,GO:0032259,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0061077,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 458.0
PJS1_k127_2568936_3 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.00000000000000000000000000000000000000000000000000002115 190.0
PJS1_k127_2568936_4 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 GO:0003674,GO:0003824,GO:0003887,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0022616,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0000000000000000000000000000000002247 133.0
PJS1_k127_2568936_5 Could be involved in insertion of integral membrane proteins into the membrane K08998 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0031224,GO:0031226,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.0000000000000000000000000001038 117.0
PJS1_k127_2568936_6 Belongs to the bacterial ribosomal protein bL34 family K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000006039 86.0
PJS1_k127_2580218_0 acyl-CoA dehydrogenase K16047 - 1.14.14.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 443.0
PJS1_k127_2580218_1 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 426.0
PJS1_k127_2580218_2 3-oxoacyl-ACP reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 316.0
PJS1_k127_2580218_3 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001525 264.0
PJS1_k127_2580218_4 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003925 254.0
PJS1_k127_2597704_0 Transporter associated domain - - - 1.176e-270 834.0
PJS1_k127_2597704_1 Serine aminopeptidase, S33 - - - 1.861e-229 711.0
PJS1_k127_2597704_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000006521 169.0
PJS1_k127_2621181_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 524.0
PJS1_k127_2621181_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 502.0
PJS1_k127_2621181_2 Signal transduction protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 492.0
PJS1_k127_2621181_3 protein conserved in bacteria K03690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 376.0
PJS1_k127_2621181_4 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.0000000000000000000000000000000000000000000000000000001226 195.0
PJS1_k127_2651761_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000049,GO:0000154,GO:0001510,GO:0002935,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016426,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070040,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:0140102,GO:1901360,GO:1901363 2.1.1.192 2.118e-231 718.0
PJS1_k127_2651761_1 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0050896,GO:0051604,GO:0051716,GO:0070417,GO:0071704,GO:0097159,GO:0097367,GO:0097428,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1990230,GO:1990234 - 5.019e-194 609.0
PJS1_k127_2651761_2 COG3063 Tfp pilus assembly protein PilF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 339.0
PJS1_k127_2651761_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001751 270.0
PJS1_k127_2651761_4 ferredoxin, 2Fe-2S K04755 - - 0.0000000000000000000000000000000000000000000000000000000004931 205.0
PJS1_k127_2651761_5 protein conserved in bacteria - GO:0003674,GO:0004857,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0030234,GO:0031163,GO:0043086,GO:0043167,GO:0043169,GO:0044085,GO:0044092,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050790,GO:0051186,GO:0065007,GO:0065009,GO:0071840,GO:0098772 - 0.0000000000000000000000000001444 115.0
PJS1_k127_2657478_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006821 504.0
PJS1_k127_2657478_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001307 267.0
PJS1_k127_2657478_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001939 250.0
PJS1_k127_266827_0 Response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes K07712 - - 1.654e-306 940.0
PJS1_k127_266827_1 alginic acid biosynthetic process K12287 - - 4.159e-270 836.0
PJS1_k127_266827_2 Histidine kinase K07708 - 2.7.13.3 1.374e-222 692.0
PJS1_k127_2689647_0 Putative diguanylate phosphodiesterase K21025 - - 0.0 1324.0
PJS1_k127_2689647_1 - - - - 0.0 1204.0
PJS1_k127_2689647_2 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 4.235e-278 858.0
PJS1_k127_2689647_3 phosphoserine phosphatase K01079 - 3.1.3.3 3.675e-253 782.0
PJS1_k127_2689647_4 lysine 2,3-aminomutase K19810 - - 1.973e-199 623.0
PJS1_k127_2689647_5 Elongation factor P--(R)-beta-lysine ligase K04568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008729 574.0
PJS1_k127_2689647_6 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 544.0
PJS1_k127_2689647_7 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005565 388.0
PJS1_k127_2689647_8 Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000003136 196.0
PJS1_k127_2697457_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 1.572e-256 793.0
PJS1_k127_2697457_1 Belongs to the KdsA family K01627 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008676,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016043,GO:0016051,GO:0016053,GO:0016740,GO:0016765,GO:0019294,GO:0019752,GO:0022607,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046394,GO:0046400,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 533.0
PJS1_k127_2697457_2 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000364 71.0
PJS1_k127_2697457_3 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0030428,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044464,GO:0051301 - 0.0000000001061 62.0
PJS1_k127_2711152_0 Cyclic nucleotide-monophosphate binding domain K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 374.0
PJS1_k127_2711152_1 ATP dependent DNA ligase domain K10747 GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005459 297.0
PJS1_k127_2711152_2 COG2610 H gluconate symporter and related permeases - - - 0.00000000000000000000000000000000000000000000000000000006665 198.0
PJS1_k127_2711152_3 Beta-lactamase - - - 0.0000000000000002677 92.0
PJS1_k127_2720886_0 helix_turn_helix, Lux Regulon K03556 - - 0.0 1594.0
PJS1_k127_2720886_1 GGDEF domain - - - 5.297e-237 735.0
PJS1_k127_2720886_2 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 392.0
PJS1_k127_2720886_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 313.0
PJS1_k127_2720886_4 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000001017 257.0
PJS1_k127_2720886_5 FMN_bind - - - 0.00000000000000000000000000000000000000000000000000000000000000000001234 233.0
PJS1_k127_2720886_6 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000000000000000000000000000001163 144.0
PJS1_k127_2730699_0 Histidine kinase - - - 1e-323 995.0
PJS1_k127_2730699_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03314 - - 7.046e-304 934.0
PJS1_k127_2730699_2 peptidase K04774 - - 5.183e-209 653.0
PJS1_k127_2730699_3 Sodium hydrogen antiporter - - - 8.112e-196 612.0
PJS1_k127_2730699_4 alcohol dehydrogenase K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007975 589.0
PJS1_k127_2730699_5 COG0500 SAM-dependent methyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 518.0
PJS1_k127_2730699_6 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 469.0
PJS1_k127_2730699_7 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 305.0
PJS1_k127_2730699_8 sterol carrier protein - - - 0.000000000000000000000000000000000000000000000000000000000007695 207.0
PJS1_k127_2730699_9 - - - - 0.0000000000000000000000000000000000000000000009075 173.0
PJS1_k127_2732736_0 Histidine kinase - - - 0.0 1110.0
PJS1_k127_2732736_1 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 1.276e-288 887.0
PJS1_k127_2732736_2 regulator - - - 2.251e-285 878.0
PJS1_k127_2732736_3 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006373 317.0
PJS1_k127_2738029_0 Diguanylate cyclase - - - 0.0 1207.0
PJS1_k127_2738029_1 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007247 488.0
PJS1_k127_2738029_3 Circularly permuted ATP-grasp type 2 - - - 0.000000000000000000000000000000001057 130.0
PJS1_k127_2740292_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 2.913e-274 844.0
PJS1_k127_2740292_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 1.852e-270 834.0
PJS1_k127_2740292_2 (ABC) transporter, permease K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 455.0
PJS1_k127_2740292_3 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 427.0
PJS1_k127_2740292_4 Organic solvent ABC transporter substrate-binding protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 286.0
PJS1_k127_2740292_5 response to antibiotic K07122 - - 0.0000000000000000000000000000000000000000000000001186 178.0
PJS1_k127_2740292_6 2 iron, 2 sulfur cluster binding - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051536,GO:0051537,GO:0051540 - 0.0000000000000000000000000000000005809 132.0
PJS1_k127_274063_0 Alpha amylase, catalytic domain K00690 GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006066,GO:0006073,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016757,GO:0019400,GO:0019751,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0051472,GO:0071704,GO:1901615 2.4.1.7 9.699e-313 959.0
PJS1_k127_274063_1 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 601.0
PJS1_k127_274063_2 cytochrome C peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 398.0
PJS1_k127_274063_3 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000000004938 205.0
PJS1_k127_2749506_0 Histidine kinase - - - 9.675e-269 829.0
PJS1_k127_2749506_1 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007655 542.0
PJS1_k127_2749506_2 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 285.0
PJS1_k127_2749506_3 Aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000002806 211.0
PJS1_k127_2749506_4 MFS transporter - - - 0.000000000000004191 76.0
PJS1_k127_2758787_0 oxidoreductase activity K07114 - - 1.773e-307 944.0
PJS1_k127_2758787_1 Alginate export - - - 1.428e-273 844.0
PJS1_k127_2758787_2 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 533.0
PJS1_k127_2758787_3 Anti-sigma-K factor rskA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 468.0
PJS1_k127_2758787_4 Bacterial regulatory proteins, tetR family K16137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000514 377.0
PJS1_k127_2758787_5 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002986 263.0
PJS1_k127_2758787_6 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000129 190.0
PJS1_k127_2758787_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000001153 131.0
PJS1_k127_2758787_8 leucine- rich repeat protein - - - 0.0000000001818 70.0
PJS1_k127_2781339_0 transport system, large permease component - - - 0.0 1185.0
PJS1_k127_2781339_1 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB - - - 0.0000000000000000000000000000000000000000000000000003566 184.0
PJS1_k127_2791326_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1033.0
PJS1_k127_2791326_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 5.957e-278 857.0
PJS1_k127_2791326_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 348.0
PJS1_k127_2791326_3 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 327.0
PJS1_k127_2791326_4 LPP20 lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 282.0
PJS1_k127_2791326_5 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000048 258.0
PJS1_k127_2793125_0 Domain of unknown function (DUF4263) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 536.0
PJS1_k127_2793125_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002081 257.0
PJS1_k127_2793125_2 Protein of unknown function (DUF1294) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004464 245.0
PJS1_k127_2793125_3 Transposase K07486 - - 0.00000000000000000000000000000000000000000000000000000000000000000008956 236.0
PJS1_k127_2793125_4 Transposase - - - 0.00000000000000000000000000000000000000000000000001709 180.0
PJS1_k127_2793125_6 - - - - 0.000000004797 58.0
PJS1_k127_2793125_7 PFAM Post-segregation antitoxin CcdA K19164 - - 0.000000835 50.0
PJS1_k127_2796855_0 receptor K02014 - - 0.0 1048.0
PJS1_k127_2796855_1 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007641 367.0
PJS1_k127_2801093_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0 1141.0
PJS1_k127_2801093_1 Belongs to the GST superfamily K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 435.0
PJS1_k127_2801093_2 MreB/Mbl protein K04046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006314 424.0
PJS1_k127_2801093_3 MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 382.0
PJS1_k127_2814592_0 COG0471 Di- and tricarboxylate transporters - - - 0.0 1013.0
PJS1_k127_2814592_1 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003047 258.0
PJS1_k127_2814592_2 Type IV secretion system coupling protein - - - 0.0000000000000000000000000000000000000000000000000000000001748 223.0
PJS1_k127_2814592_3 - - - - 0.0000000000000000000006462 99.0
PJS1_k127_2814592_4 Transcriptional regulator - - - 0.000004554 52.0
PJS1_k127_2826140_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.0 1101.0
PJS1_k127_2826140_1 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 2.043e-209 652.0
PJS1_k127_2826140_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 5.186e-206 643.0
PJS1_k127_2826140_3 peptidase K04773 - - 1.846e-199 622.0
PJS1_k127_2826140_4 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 555.0
PJS1_k127_2826140_5 metal-binding, possibly nucleic acid-binding protein K07040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 359.0
PJS1_k127_2826140_6 Hydrolase K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000001222 216.0
PJS1_k127_2826140_7 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000003201 188.0
PJS1_k127_2826140_8 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000000000009524 124.0
PJS1_k127_2839691_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 1.757e-223 692.0
PJS1_k127_2839691_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005026 597.0
PJS1_k127_2839691_2 transmembrane signaling receptor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 323.0
PJS1_k127_2839691_3 methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000006881 241.0
PJS1_k127_2839691_4 SprT-like family - - - 0.0000000000000000000000000000000000005769 141.0
PJS1_k127_284219_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1597.0
PJS1_k127_284219_2 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000004807 104.0
PJS1_k127_2864360_0 Chemotaxis protein histidine kinase and related K03407 - 2.7.13.3 0.0 1283.0
PJS1_k127_2864360_1 SRP54-type protein, GTPase domain K02404 - - 3.059e-285 878.0
PJS1_k127_2864360_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 6.605e-204 636.0
PJS1_k127_2864360_3 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K04562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006942 522.0
PJS1_k127_2864360_4 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 518.0
PJS1_k127_2864360_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121 486.0
PJS1_k127_2864360_6 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009896 464.0
PJS1_k127_2864360_7 Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002917 246.0
PJS1_k127_2866935_0 cheY-homologous receiver domain - - - 2.957e-319 981.0
PJS1_k127_2866935_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 8.151e-212 664.0
PJS1_k127_2866935_10 - K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000004963 170.0
PJS1_k127_2866935_11 hydrolase K10806 - - 0.0000000000000001564 78.0
PJS1_k127_2866935_2 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 3.714e-207 647.0
PJS1_k127_2866935_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 561.0
PJS1_k127_2866935_4 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 557.0
PJS1_k127_2866935_5 phosphorelay sensor kinase activity K03406,K07675,K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005572 430.0
PJS1_k127_2866935_7 DoxX - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 399.0
PJS1_k127_2866935_8 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 361.0
PJS1_k127_2866935_9 cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 314.0
PJS1_k127_2888494_0 Histidine kinase K07678 - 2.7.13.3 1.124e-212 662.0
PJS1_k127_2888494_1 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 300.0
PJS1_k127_2888494_2 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000003377 107.0
PJS1_k127_2916865_0 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 600.0
PJS1_k127_2916865_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007485 529.0
PJS1_k127_2916865_2 Bacterial transglutaminase-like cysteine proteinase BTLCP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 413.0
PJS1_k127_2916865_3 MJ0042 family finger-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 371.0
PJS1_k127_2916865_4 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 289.0
PJS1_k127_2922814_0 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0 1075.0
PJS1_k127_2922814_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 5.93e-322 996.0
PJS1_k127_2922814_2 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000004635 187.0
PJS1_k127_2922814_3 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000000000000000001494 172.0
PJS1_k127_2936405_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1592.0
PJS1_k127_2936405_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 427.0
PJS1_k127_2936405_2 pyrophosphohydrolase K04765 - 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 325.0
PJS1_k127_2936405_3 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0000000000000000000000000000001465 123.0
PJS1_k127_2937647_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0 1299.0
PJS1_k127_2937647_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 2.441e-252 778.0
PJS1_k127_2937647_10 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007024 273.0
PJS1_k127_2937647_11 Belongs to the SlyX family K03745 - - 0.00000000000000000000000000000000000000007209 151.0
PJS1_k127_2937647_13 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000004579 59.0
PJS1_k127_2937647_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 3.339e-237 735.0
PJS1_k127_2937647_3 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 1.084e-235 732.0
PJS1_k127_2937647_4 serine acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 541.0
PJS1_k127_2937647_5 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 518.0
PJS1_k127_2937647_6 COG3063 Tfp pilus assembly protein PilF K02656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 517.0
PJS1_k127_2937647_7 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 512.0
PJS1_k127_2937647_8 Cold-shock' K03704 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 313.0
PJS1_k127_2937647_9 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255 306.0
PJS1_k127_293970_0 Amidohydrolase family K18456 - 3.5.4.32 7.144e-292 898.0
PJS1_k127_293970_1 - - - - 9.545e-273 843.0
PJS1_k127_293970_10 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006786 320.0
PJS1_k127_293970_11 Iron-regulated membrane protein K09939 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005765 296.0
PJS1_k127_293970_12 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001474 251.0
PJS1_k127_293970_2 COG0457 FOG TPR repeat - - - 6e-268 826.0
PJS1_k127_293970_3 Purine nucleoside permease (NUP) - - - 6.879e-239 739.0
PJS1_k127_293970_4 Dehydrogenase K12957,K13979 - - 6.183e-222 688.0
PJS1_k127_293970_6 cAMP phosphodiesterases class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 600.0
PJS1_k127_293970_7 esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007481 552.0
PJS1_k127_293970_8 transcriptional regulator K09017 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006963 438.0
PJS1_k127_293970_9 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 413.0
PJS1_k127_2943262_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 1.627e-253 781.0
PJS1_k127_2943262_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 4.49e-203 633.0
PJS1_k127_2943262_2 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 308.0
PJS1_k127_2943262_3 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 K03774 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0061077,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.0000000000000000000000000000000000000000000000003329 179.0
PJS1_k127_2943932_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 1.197e-202 631.0
PJS1_k127_2943932_1 peptidase M48, Ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 493.0
PJS1_k127_2943932_2 Putative heavy-metal-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 282.0
PJS1_k127_2943932_3 Putative heavy-metal-binding - - - 0.00000000000000000000000000000000000000000000000000000003914 196.0
PJS1_k127_2965532_0 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K00974 - 2.7.7.72 1.655e-228 710.0
PJS1_k127_2965532_1 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 390.0
PJS1_k127_2984288_0 PFAM nucleic acid binding, OB-fold, tRNA - - - 0.0 1240.0
PJS1_k127_2984288_1 Belongs to the 5'-nucleotidase family K01119 - 3.1.3.6,3.1.4.16 1.042e-206 644.0
PJS1_k127_2984288_2 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 340.0
PJS1_k127_2984288_3 transcriptional regulators - - - 0.00000000000000000000000009526 110.0
PJS1_k127_3000404_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 2.287e-297 914.0
PJS1_k127_3000404_1 Cobalt zinc cadmium efflux RND transporter outermembrane protein K15725 - - 3.935e-256 793.0
PJS1_k127_3000404_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000003922 226.0
PJS1_k127_3000404_3 PFAM biotin lipoyl attachment domain-containing protein K15727 - - 0.00000000000000000000000000000000000000000000000000000000005797 211.0
PJS1_k127_3032018_0 Lipoprotein releasing system, transmembrane protein K09808 - - 3.262e-252 781.0
PJS1_k127_3032018_2 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051234,GO:0051641,GO:0055085,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0097159,GO:0097367,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1990778 - 0.000000000000000000000000000000000000000000000000000000000000000000000000004155 259.0
PJS1_k127_3032018_3 protein conserved in bacteria K09928 - - 0.000000000000000000000000000000000000000000000000000000000000000001106 231.0
PJS1_k127_3032771_0 enoyl-CoA hydratase - - - 1.787e-253 781.0
PJS1_k127_3032771_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.112e-225 699.0
PJS1_k127_3032771_10 Positive regulator of K03803 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005434 288.0
PJS1_k127_3032771_11 Flavinator of succinate dehydrogenase K09159 - - 0.000000000000000000000000000000000000000000000003266 173.0
PJS1_k127_3032771_13 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000000000000000008116 105.0
PJS1_k127_3032771_2 Negative regulator of sigma E activity K03598 - - 2.655e-197 617.0
PJS1_k127_3032771_3 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 542.0
PJS1_k127_3032771_4 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 536.0
PJS1_k127_3032771_5 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009283 523.0
PJS1_k127_3032771_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 417.0
PJS1_k127_3032771_8 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 376.0
PJS1_k127_3032771_9 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 347.0
PJS1_k127_3040412_0 PFAM Sulfatase - - - 5.301e-285 894.0
PJS1_k127_3040412_1 PFAM AMP-dependent synthetase K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 443.0
PJS1_k127_3040412_2 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000008279 122.0
PJS1_k127_3040412_3 TonB dependent receptor - - - 0.000000000000000000000000002013 112.0
PJS1_k127_3040412_4 transcriptional regulator - - - 0.0000000000000000000002625 104.0
PJS1_k127_3040412_5 TonB dependent receptor - - - 0.0000000000000000005667 91.0
PJS1_k127_3040412_6 Cytochrome c554 and c-prime - - - 0.000000001611 61.0
PJS1_k127_3040412_7 Cytochrome c554 and c-prime - - - 0.0004055 49.0
PJS1_k127_3061538_0 Type VI secretion K11896 - - 0.0 1234.0
PJS1_k127_3061538_1 Type VI secretion protein, EvpB/VC_A0108, tail sheath K11899 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 464.0
PJS1_k127_3061538_2 Gene 25-like lysozyme K11897 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 318.0
PJS1_k127_3061538_3 Type VI secretion, TssG K11895 - - 0.0000000000000000000000000000000000000000000005886 178.0
PJS1_k127_3065450_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1275.0
PJS1_k127_3065450_1 with the alpha beta hydrolase fold K01046 - 3.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 417.0
PJS1_k127_3065450_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000396 80.0
PJS1_k127_3072122_0 phosphomannomutase K15778 - 5.4.2.2,5.4.2.8 0.0 1586.0
PJS1_k127_3072122_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930,K22478 - 2.3.1.1,2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009886 584.0
PJS1_k127_3072122_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 496.0
PJS1_k127_3072122_3 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000166,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019103,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901136,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000001165 247.0
PJS1_k127_308156_0 COG0668 Small-conductance mechanosensitive channel K16052 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 422.0
PJS1_k127_308156_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006282,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 369.0
PJS1_k127_308156_2 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division - - - 0.000000000000000000000000000000000000000000000000000000000000003638 219.0
PJS1_k127_308156_3 - - - - 0.00000000000000000000000000000000000000000009941 161.0
PJS1_k127_308156_4 - - - - 0.0000000000000000000000000000003521 124.0
PJS1_k127_3098838_0 Outer membrane protein beta-barrel family - - - 3.262e-229 710.0
PJS1_k127_3098838_1 Phytase K01083 - 3.1.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 397.0
PJS1_k127_3112907_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1917.0
PJS1_k127_3112907_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000003988 122.0
PJS1_k127_3120337_0 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 1.386e-288 889.0
PJS1_k127_3120337_1 Belongs to the 'phage' integrase family - - - 1.119e-237 734.0
PJS1_k127_3120337_2 reductase K00023 - 1.1.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 499.0
PJS1_k127_3157296_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000853 557.0
PJS1_k127_3157296_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 461.0
PJS1_k127_3157296_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 301.0
PJS1_k127_3175513_0 Belongs to the 5'-nucleotidase family K01119 - 3.1.3.6,3.1.4.16 5.654e-223 692.0
PJS1_k127_3175513_1 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 1.737e-220 689.0
PJS1_k127_3175513_2 Beta-galactosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002941 231.0
PJS1_k127_3175513_3 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000000000000000000000000000001004 223.0
PJS1_k127_3211227_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 0.0 1405.0
PJS1_k127_3211227_1 COG0501 Zn-dependent protease with chaperone function - - - 4.865e-234 729.0
PJS1_k127_3211227_2 Belongs to the ompA family K03286 - - 5.56e-200 629.0
PJS1_k127_3211227_3 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 423.0
PJS1_k127_3211227_4 lipocalin K03098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 307.0
PJS1_k127_3211227_5 COG2755 Lysophospholipase L1 and related esterases K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.000000000000000000000000000000000000000000000000000000001668 209.0
PJS1_k127_3211227_6 TonB dependent receptor K02014 - - 0.00000000000000000000000000000001337 128.0
PJS1_k127_321837_0 Fatty acid desaturase - - - 4.41e-238 741.0
PJS1_k127_321837_1 Arabinose-binding domain of AraC transcription regulator, N-term - - - 3.737e-201 628.0
PJS1_k127_321837_2 Methylenetetrahydrofolate reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000577 237.0
PJS1_k127_3230728_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 3.327e-290 890.0
PJS1_k127_3230728_1 Dyp-type peroxidase family K07223 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008389 527.0
PJS1_k127_324019_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.334e-273 843.0
PJS1_k127_324019_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009633 548.0
PJS1_k127_324019_10 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000000000000000000000000000002461 218.0
PJS1_k127_324019_11 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000000000000000000000000000000000000004554 214.0
PJS1_k127_324019_12 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000000000000000000000000000000003052 209.0
PJS1_k127_324019_13 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000000000000000000000000000000000000001032 196.0
PJS1_k127_324019_14 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000000000000000000006081 192.0
PJS1_k127_324019_15 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000000000000000000000000001946 177.0
PJS1_k127_324019_16 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000000000000000000001622 123.0
PJS1_k127_324019_17 Ribosomal protein L30 K02907 - - 0.000000000000000000000000000002047 120.0
PJS1_k127_324019_18 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000000000000000000001765 117.0
PJS1_k127_324019_19 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000001185 64.0
PJS1_k127_324019_2 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 458.0
PJS1_k127_324019_3 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 363.0
PJS1_k127_324019_4 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 346.0
PJS1_k127_324019_5 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004859 339.0
PJS1_k127_324019_6 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003083 273.0
PJS1_k127_324019_7 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001849 269.0
PJS1_k127_324019_8 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002591 250.0
PJS1_k127_324019_9 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002032 239.0
PJS1_k127_328681_0 Fatty acid desaturase K00507 - 1.14.19.1 1.225e-209 652.0
PJS1_k127_328681_1 short-chain dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 529.0
PJS1_k127_328681_2 Uncharacterized conserved protein (DUF2358) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 302.0
PJS1_k127_328681_3 NAD FAD-binding protein K06954 - - 0.00000000000000000000000000000008604 124.0
PJS1_k127_3295712_0 domain protein - - - 0.0 1041.0
PJS1_k127_3295712_1 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 418.0
PJS1_k127_3317493_0 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 561.0
PJS1_k127_3317493_1 Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006522 376.0
PJS1_k127_3317493_2 signal transduction protein containing EAL and modified HD-GYP domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005072 353.0
PJS1_k127_3337869_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 8.803e-207 651.0
PJS1_k127_3337869_1 Rieske 2Fe2S - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 546.0
PJS1_k127_3337869_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006740,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008746,GO:0008750,GO:0009117,GO:0009987,GO:0016020,GO:0016021,GO:0016491,GO:0016651,GO:0016652,GO:0019362,GO:0019637,GO:0031224,GO:0031226,GO:0034641,GO:0036094,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0046483,GO:0046496,GO:0046983,GO:0048037,GO:0050661,GO:0050662,GO:0051186,GO:0051287,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072524,GO:0097159,GO:1901265,GO:1901360,GO:1901363,GO:1901564 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000111 239.0
PJS1_k127_3337869_3 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000001044 196.0
PJS1_k127_3337869_4 COG3288 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.00000000000000000000000000000000007634 136.0
PJS1_k127_3337869_5 SnoaL-like domain - - - 0.000000000000000000000000000000001466 134.0
PJS1_k127_3340286_0 Fatty acid desaturase K00496 GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016491,GO:0016705,GO:0016713,GO:0018685,GO:0043446,GO:0043448,GO:0044237,GO:0044248,GO:0055114,GO:0071704,GO:1901575 1.14.15.3 2.267e-261 808.0
PJS1_k127_3340286_1 Transcriptional - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004231 420.0
PJS1_k127_3340286_2 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 325.0
PJS1_k127_3340286_3 Involved in chromosome partitioning - - - 0.00000000000000000000000205 103.0
PJS1_k127_3363709_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 579.0
PJS1_k127_3363709_1 transcriptional regulator K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003794 492.0
PJS1_k127_3363709_2 P-type ATPase K01533 - 3.6.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006318 469.0
PJS1_k127_3363709_3 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 399.0
PJS1_k127_3363709_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 332.0
PJS1_k127_3363709_6 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006652 252.0
PJS1_k127_3363709_7 Cytochrome oxidase maturation protein cbb3-type - - - 0.0000000000000000000000001622 106.0
PJS1_k127_3390935_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1344.0
PJS1_k127_3390935_1 Phytase K01083 - 3.1.3.8 4.183e-274 843.0
PJS1_k127_3390935_2 Aminotransferase K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 594.0
PJS1_k127_3399546_0 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 0.0 1283.0
PJS1_k127_3399546_1 FAD linked oxidase - - - 1.953e-306 940.0
PJS1_k127_3399546_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 1.307e-259 803.0
PJS1_k127_3399546_3 PFAM Metal-dependent phosphohydrolase, HD - - - 0.000000000000000000000000000000000000000004388 154.0
PJS1_k127_3434734_0 LVIVD repeat - - - 0.0 2546.0
PJS1_k127_3434734_1 - - - - 0.0 998.0
PJS1_k127_3434734_2 CHASE2 K01768 - 4.6.1.1 2.103e-297 914.0
PJS1_k127_3434734_3 Cytochrome c554 and c-prime - - - 9.043e-264 815.0
PJS1_k127_3434734_4 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 591.0
PJS1_k127_3434734_5 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000000000000000000000000000000000000000000002622 225.0
PJS1_k127_3458924_0 Acyltransferase - - - 0.0 1225.0
PJS1_k127_3458924_1 dienelactone hydrolase K21104 - 3.1.1.101 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 593.0
PJS1_k127_3458924_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 558.0
PJS1_k127_3458924_3 carboxymethylenebutenolidase activity K01061,K21104 - 3.1.1.101,3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 303.0
PJS1_k127_3458924_4 translation initiation factor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009715 282.0
PJS1_k127_348341_0 Dehydrogenase K15371 - 1.4.1.2 0.0 3052.0
PJS1_k127_348341_1 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 2.357e-224 697.0
PJS1_k127_348341_2 - - - - 1.29e-213 667.0
PJS1_k127_348341_3 Protein of unknown function (DUF2835) - - - 0.0000000000000000000000000000000000000002057 150.0
PJS1_k127_3511444_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 428.0
PJS1_k127_3511444_1 Belongs to the CinA family K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000006251 245.0
PJS1_k127_3511444_2 Belongs to the citrate synthase family K01647 GO:0003674,GO:0003824,GO:0004108,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016740,GO:0016746,GO:0016999,GO:0017144,GO:0019752,GO:0036440,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046912,GO:0055114,GO:0071704,GO:0072350 2.3.3.1 0.000000000000000000000000000000000000000002533 154.0
PJS1_k127_3511444_3 Protein of unknown function (DUF2789) - - - 0.000000000000000000000000000000000000004416 146.0
PJS1_k127_3511444_4 - - - - 0.00000000000000000000000000000000000002969 146.0
PJS1_k127_3511444_5 - - - - 0.00000000000000000000007051 99.0
PJS1_k127_3514406_0 Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds K01649,K01666 - 2.3.3.13,4.1.3.39 4.863e-198 619.0
PJS1_k127_3514406_1 Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD( ) and coenzyme A. Is the final enzyme in the meta- cleavage pathway for the degradation of aromatic compounds K04073 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008774,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 509.0
PJS1_k127_3514406_2 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 294.0
PJS1_k127_3514406_3 Bacterial transcriptional regulator - - - 0.000000000000000000000000000000000000007459 154.0
PJS1_k127_3514406_4 enoyl-CoA hydratase K15866 - 5.3.3.18 0.0000000000000002596 85.0
PJS1_k127_3535454_0 COG2070 Dioxygenases related to 2-nitropropane dioxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 4.134e-207 646.0
PJS1_k127_3535454_1 with the alpha beta hydrolase fold K01046 - 3.1.1.3 5.341e-200 625.0
PJS1_k127_3535454_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 408.0
PJS1_k127_3535454_4 Proteobacterial lipase chaperone protein - - - 0.0002559 46.0
PJS1_k127_3549432_0 Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA - - - 4.571e-220 685.0
PJS1_k127_3549432_1 enoyl-CoA hydratase K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002177 278.0
PJS1_k127_3563535_0 MATE efflux family protein K03327 - - 1.02e-277 856.0
PJS1_k127_3563535_1 protein conserved in bacteria K09906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000111 279.0
PJS1_k127_3563535_2 Nacht domain - - - 0.00000000000001016 77.0
PJS1_k127_3574803_0 protease K08303 - - 2.591e-296 910.0
PJS1_k127_3574803_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 548.0
PJS1_k127_3574803_2 Pseudouridine synthase K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 423.0
PJS1_k127_3574803_3 Protein of unknown function (DUF1461) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007947 393.0
PJS1_k127_3574803_5 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000113 254.0
PJS1_k127_3581430_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 1.227e-311 956.0
PJS1_k127_3581430_1 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 9.35e-199 620.0
PJS1_k127_3581430_2 antiporter K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 572.0
PJS1_k127_3581430_3 ABC transporter maintaining outer membrane lipid asymmetry K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 533.0
PJS1_k127_3581430_4 ABC transporter ATP-binding protein K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006172 481.0
PJS1_k127_3581430_5 lipopolysaccharide transmembrane transporter activity K02040,K11719 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015920,GO:0016020,GO:0016021,GO:0017089,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000088 343.0
PJS1_k127_3581430_6 seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing K05808 - - 0.0000000000000000000000000000000000000000000000000000000001729 203.0
PJS1_k127_3581430_7 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 - - 0.00000000000000000000003166 106.0
PJS1_k127_3581430_8 PTS fructose transporter subunit IIA K02806 - - 0.000000000000000000005273 93.0
PJS1_k127_3581430_9 (ABC) transporter, permease K02066 - - 0.00004487 45.0
PJS1_k127_3582416_0 nucleoid-associated protein K06899 - - 2.659e-236 733.0
PJS1_k127_3582416_2 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000901 313.0
PJS1_k127_3582416_3 Protein of unknown function (DUF2750) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001515 277.0
PJS1_k127_3620731_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 1.467e-266 824.0
PJS1_k127_3620731_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000000000000000000000000000000000000000000000000001214 219.0
PJS1_k127_362153_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0 1206.0
PJS1_k127_362153_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 6.859e-303 933.0
PJS1_k127_362153_2 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 2.987e-250 776.0
PJS1_k127_362153_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 3.257e-232 719.0
PJS1_k127_362153_4 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004842 359.0
PJS1_k127_362153_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006075 326.0
PJS1_k127_362153_6 ATPase or kinase K06925 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005325 302.0
PJS1_k127_362153_7 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000006981 261.0
PJS1_k127_3658045_0 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 491.0
PJS1_k127_3658045_1 cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 392.0
PJS1_k127_3658045_2 Glycosyl transferase family 2 K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 372.0
PJS1_k127_3658045_3 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000002832 227.0
PJS1_k127_3696052_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006172 481.0
PJS1_k127_3696052_1 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000009525 212.0
PJS1_k127_3696052_2 transcriptional regulator - - - 0.000000000001157 74.0
PJS1_k127_3741129_0 helicase - - - 2.498e-246 782.0
PJS1_k127_3741129_2 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 291.0
PJS1_k127_3741129_3 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000001228 218.0
PJS1_k127_3741129_4 decanoate-CoA ligase activity - - - 0.00000000000000000000000000000000000000000000000001373 188.0
PJS1_k127_378045_0 Belongs to the peptidase S11 family K07258 - 3.4.16.4 8.399e-240 743.0
PJS1_k127_378045_1 Protein of unknown function (DUF3549) - - - 2.94e-216 672.0
PJS1_k127_378045_3 Belongs to the UPF0225 family K09858 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 285.0
PJS1_k127_378045_4 Belongs to the UPF0250 family K09158 - - 0.000000000000000000000000000000000000000000000000004477 181.0
PJS1_k127_378045_6 protein conserved in bacteria - - - 0.0000000000000000000000000003569 115.0
PJS1_k127_378045_7 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000006401 109.0
PJS1_k127_3794781_0 RNA-binding protein homologous to eukaryotic snRNP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000183 265.0
PJS1_k127_3794781_1 synthase K01737 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0070497,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000000000000000002296 227.0
PJS1_k127_3794781_2 Phosphate-selective porin O and P K07221 - - 0.00000000000000000000000000000000000000352 157.0
PJS1_k127_3808505_0 dihydrodipicolinate reductase K21672 - 1.4.1.12,1.4.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006993 361.0
PJS1_k127_3808505_1 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003062 281.0
PJS1_k127_3808505_2 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001974 264.0
PJS1_k127_3808505_3 Transcriptional regulator, LysR family - - - 0.0000000000000000000000000000000000000000004181 169.0
PJS1_k127_3808505_4 belongs to the CobB CobQ family K13788 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006083,GO:0006084,GO:0006085,GO:0006091,GO:0006113,GO:0006139,GO:0006163,GO:0006164,GO:0006520,GO:0006566,GO:0006567,GO:0006629,GO:0006631,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008959,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015980,GO:0016053,GO:0016054,GO:0016407,GO:0016740,GO:0016746,GO:0016747,GO:0016999,GO:0017000,GO:0017001,GO:0017144,GO:0018130,GO:0019413,GO:0019427,GO:0019438,GO:0019541,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0042737,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045733,GO:0046390,GO:0046394,GO:0046395,GO:0046459,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0070689,GO:0071616,GO:0071704,GO:0072329,GO:0072330,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606 2.3.1.8 0.0006531 44.0
PJS1_k127_3820033_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 1.42e-252 783.0
PJS1_k127_3820033_1 flavoprotein involved in K transport - - - 3.812e-234 724.0
PJS1_k127_382041_0 NADH ubiquinone oxidoreductase subunit 5 (Chain L) Multisubunit Na H antiporter, MnhA subunit K05559 - - 0.0 1740.0
PJS1_k127_382041_1 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K05561 - - 3.105e-298 917.0
PJS1_k127_382041_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 5.442e-222 688.0
PJS1_k127_382041_3 Multisubunit Na H antiporter, MnhC subunit K05560 - - 0.0000000000000000000000000000000000000000000000000000000000000001036 222.0
PJS1_k127_382041_4 antiporter K05562 - - 0.0000000000000000000000000002248 115.0
PJS1_k127_3824623_0 Histidine kinase - - - 0.0 1058.0
PJS1_k127_3824623_1 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 1.164e-224 698.0
PJS1_k127_384048_0 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 2.022e-258 797.0
PJS1_k127_384048_1 ATPase, AAA K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 443.0
PJS1_k127_384048_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 331.0
PJS1_k127_384048_3 ATPase, AAA K03924 - - 0.00000000000000000000000000000000001556 135.0
PJS1_k127_384048_4 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000003907 106.0
PJS1_k127_3846866_0 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0042802,GO:0043021,GO:0043022,GO:0043170,GO:0043335,GO:0043412,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0051083,GO:0061077,GO:0071704,GO:0140096,GO:1901564 - 6.578e-243 754.0
PJS1_k127_3846866_1 Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed K00632 GO:0003674,GO:0003824,GO:0003988,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 2.3.1.16 4.22e-232 721.0
PJS1_k127_3846866_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051301,GO:0051704,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 581.0
PJS1_k127_3846866_3 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K01782,K01825 GO:0003674,GO:0003824,GO:0003857,GO:0004165,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008692,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 488.0
PJS1_k127_3846866_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 403.0
PJS1_k127_3846866_5 - - - - 0.000006792 48.0
PJS1_k127_3848089_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0 1147.0
PJS1_k127_3848089_1 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 4.441e-223 694.0
PJS1_k127_3848089_2 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007808 553.0
PJS1_k127_3848089_3 isochorismatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005072 325.0
PJS1_k127_3848089_4 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001902 258.0
PJS1_k127_3848089_5 Protein of unknown function (DUF938) - - - 0.0000000000000000000000000000000000000000000003154 168.0
PJS1_k127_3861279_0 TonB-dependent Receptor Plug Domain K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 619.0
PJS1_k127_3861279_1 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 615.0
PJS1_k127_3861279_2 - - - - 0.0000000000000000000000000000000000000000000000000004171 193.0
PJS1_k127_3861279_3 - - - - 0.000000000000000000000000000000001068 141.0
PJS1_k127_3861279_4 - - - - 0.0000000000000000000000002773 114.0
PJS1_k127_3861279_5 transcriptional regulator - - - 0.0000005062 57.0
PJS1_k127_388722_0 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 1.744e-203 634.0
PJS1_k127_388722_1 Flagellar hook-length control protein FliK K02414 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 604.0
PJS1_k127_388722_2 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 323.0
PJS1_k127_388722_3 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000562 316.0
PJS1_k127_388722_4 FOG HPt domain K20976 - - 0.00000000004734 63.0
PJS1_k127_3903018_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1883.0
PJS1_k127_3903018_1 AcrB/AcrD/AcrF family - - - 0.0 1194.0
PJS1_k127_3903018_2 Histidine kinase-like ATPases - - - 2.169e-296 914.0
PJS1_k127_3903018_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 554.0
PJS1_k127_3907717_0 Large extracellular alpha-helical protein K06894 - - 0.0 2342.0
PJS1_k127_3907717_1 TonB dependent receptor K02014 - - 0.0 1319.0
PJS1_k127_3907717_2 COG1283 Na phosphate symporter K03324 - - 0.0 1080.0
PJS1_k127_3907717_3 - - - - 3.075e-256 800.0
PJS1_k127_3907717_4 PFAM Ion transport 2 K10716 - - 2.694e-237 736.0
PJS1_k127_3907717_5 belongs to the carbohydrate kinase PfkB family K00847,K00892 - 2.7.1.4,2.7.1.73 1.042e-206 644.0
PJS1_k127_3907717_6 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 503.0
PJS1_k127_3907717_7 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 329.0
PJS1_k127_3924509_0 Glycosyltransferase Family 4 - - - 3.659e-230 715.0
PJS1_k127_3924509_3 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 280.0
PJS1_k127_3924509_7 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.0000000000000000000000000001637 115.0
PJS1_k127_3949666_0 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 607.0
PJS1_k127_3953475_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0 1187.0
PJS1_k127_3953475_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0 1035.0
PJS1_k127_3953475_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 7.388e-226 700.0
PJS1_k127_3953475_3 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002792 266.0
PJS1_k127_3953475_4 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004516 264.0
PJS1_k127_3953475_5 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000000000000000000000000002824 140.0
PJS1_k127_3953475_6 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 GO:0003674,GO:0003824,GO:0004150,GO:0005488,GO:0005515,GO:0016829,GO:0016830,GO:0016832,GO:0042802 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000004242 125.0
PJS1_k127_3959397_0 Belongs to the GST superfamily K11209 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006236 454.0
PJS1_k127_3959397_1 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007384 377.0
PJS1_k127_3959397_2 Glutathione S-transferase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000002355 193.0
PJS1_k127_3969728_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 8.807e-308 946.0
PJS1_k127_3969728_1 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 9.331e-211 657.0
PJS1_k127_3969728_2 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 527.0
PJS1_k127_3969728_3 COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 476.0
PJS1_k127_3969728_4 COG0406 Fructose-2,6-bisphosphatase K02226 - 3.1.3.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 413.0
PJS1_k127_3969728_5 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007606 409.0
PJS1_k127_3969728_6 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 313.0
PJS1_k127_3969728_7 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008818,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.8.26 0.0000000000000000000000000000000000000000000000000000003725 202.0
PJS1_k127_397863_0 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.0 1401.0
PJS1_k127_397863_1 flavoprotein involved in K transport - - - 0.0 1012.0
PJS1_k127_397863_10 Protein affecting phage T7 exclusion by the F plasmid K07113 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004844 263.0
PJS1_k127_397863_11 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008071 258.0
PJS1_k127_397863_12 Methyltransferase K07443 - - 0.000000000000000000000000000000000000000003435 156.0
PJS1_k127_397863_13 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000001576 66.0
PJS1_k127_397863_2 protein conserved in bacteria - - - 6.52e-321 987.0
PJS1_k127_397863_3 carnitine dehydratase - - - 1.133e-259 801.0
PJS1_k127_397863_4 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 2.078e-256 791.0
PJS1_k127_397863_5 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 1.101e-248 767.0
PJS1_k127_397863_6 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 490.0
PJS1_k127_397863_7 Protein of unknown function (DUF1449) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 406.0
PJS1_k127_397863_8 PspA IM30 family protein K03969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 400.0
PJS1_k127_397863_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 307.0
PJS1_k127_398605_0 amino acid aldolase or racemase - - - 3.282e-221 691.0
PJS1_k127_398605_1 FeS assembly SUF system protein SufT - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 349.0
PJS1_k127_398605_2 Belongs to the HesB IscA family K05997,K13628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007661 240.0
PJS1_k127_398605_3 Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000004418 224.0
PJS1_k127_3987251_0 DNA polymerase III K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000976 595.0
PJS1_k127_3987251_1 due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm K01869 - 6.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 531.0
PJS1_k127_3987251_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 462.0
PJS1_k127_3987251_3 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 297.0
PJS1_k127_3987251_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000002669 223.0
PJS1_k127_3991921_0 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates K01141 - 3.1.11.1 2.605e-319 977.0
PJS1_k127_3991921_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 519.0
PJS1_k127_3991921_2 3-methyladenine DNA glycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 462.0
PJS1_k127_3991921_3 Glutaredoxin - - - 0.0000000000000000000000000000000000000000000000000004923 186.0
PJS1_k127_3991921_4 phenylacetate-CoA ligase activity - - - 0.000000000000000000000000000000000000002394 148.0
PJS1_k127_3995471_0 Cation efflux family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 586.0
PJS1_k127_3995471_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 464.0
PJS1_k127_3995471_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 387.0
PJS1_k127_3995471_3 ABC transporter, ATP-binding protein K02003 - - 0.000000000000000000000000000000000000000000000000000000458 199.0
PJS1_k127_3995471_4 Protein of unknown function (DUF3299) K09950 - - 0.000000000000000000000000000000000000000000000008399 180.0
PJS1_k127_3995471_5 Metal-sensitive transcriptional repressor - - - 0.00000000000000000000000000000007895 130.0
PJS1_k127_3995471_6 P-type ATPase K17686 - 3.6.3.54 0.00000000000000000000134 94.0
PJS1_k127_3995471_7 GTPases (G3E family) - - - 0.00000000001141 65.0
PJS1_k127_4054026_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0 1089.0
PJS1_k127_4054026_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 9.559e-274 843.0
PJS1_k127_4054026_2 - - - - 8.576e-252 778.0
PJS1_k127_4054026_3 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 579.0
PJS1_k127_4054026_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007556 570.0
PJS1_k127_4054026_5 protein conserved in bacteria K09781 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000641 542.0
PJS1_k127_4058268_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 0.0 1531.0
PJS1_k127_4058268_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 4.846e-245 760.0
PJS1_k127_4058268_2 Required for the activity of the bacterial periplasmic transport system of putrescine K11069,K11073 - - 8.909e-231 716.0
PJS1_k127_4058268_3 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005178 534.0
PJS1_k127_4109754_0 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009456 498.0
PJS1_k127_4109754_1 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000502 248.0
PJS1_k127_4109754_2 Predicted membrane protein (DUF2127) - - - 0.0000000000000000000000000000000000000000000002747 171.0
PJS1_k127_4109754_3 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000003255 166.0
PJS1_k127_4109754_4 DoxX-like family - - - 0.0000000000000000000000000000000001832 136.0
PJS1_k127_4109754_6 - - - - 0.0000000002126 64.0
PJS1_k127_4137188_0 Methionine synthase K00548 - 2.1.1.13 1.262e-311 955.0
PJS1_k127_4137188_1 Sigma factor PP2C-like phosphatases - - - 2.118e-248 770.0
PJS1_k127_4137188_2 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 3.579e-210 655.0
PJS1_k127_4137188_3 Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins K07400 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 383.0
PJS1_k127_4137188_4 factor (Antagonist - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 322.0
PJS1_k127_4137188_5 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 294.0
PJS1_k127_4137188_6 phosphohistidine phosphatase, SixA K08296 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006322 271.0
PJS1_k127_4137188_7 PilZ domain - - - 0.000000000000000000000000000000000000000000000000000002948 192.0
PJS1_k127_4137188_8 Domain of unknown function (DUF4389) - - - 0.000000000000000000000000000000000000000000000000004262 181.0
PJS1_k127_4152046_0 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 4.412e-197 617.0
PJS1_k127_4152046_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K19696 - 2.4.2.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 500.0
PJS1_k127_4152046_2 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000003617 212.0
PJS1_k127_4179006_0 COG3023 Negative regulator of beta-lactamase expression K01447,K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043170,GO:0044424,GO:0044464,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002596 277.0
PJS1_k127_4179006_1 Acyl-CoA thioesterase K10805 - - 0.0000000000000000000000000000000000000000000000000002259 196.0
PJS1_k127_4179006_2 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000148 131.0
PJS1_k127_4193446_0 Saccharopine dehydrogenase NADP binding domain - - - 2.351e-288 886.0
PJS1_k127_4193446_1 AAA ATPase central domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 339.0
PJS1_k127_4193446_2 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005261 289.0
PJS1_k127_4193446_3 Domain of unknown function (DUF1794) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000149 254.0
PJS1_k127_4193446_4 COG0798 Arsenite efflux pump ACR3 and related permeases K03325 - - 0.000000000000000000000000000000000000000000000000000000000002981 208.0
PJS1_k127_4193446_5 Transcriptional regulator K03892 - - 0.0000000000000000000000006241 109.0
PJS1_k127_4193446_6 PFAM regulatory protein LuxR - - - 0.00000000000000000962 90.0
PJS1_k127_4194073_0 Sulfite reductase K00381 - 1.8.1.2 0.0 1129.0
PJS1_k127_4194073_1 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 491.0
PJS1_k127_4194073_2 Na -driven multidrug efflux pump - - - 0.00000000000000000000000000000000000000000000006666 169.0
PJS1_k127_4194073_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000003962 139.0
PJS1_k127_4194073_4 Sodium hydrogen antiporter - - - 0.00000000000000000000004132 98.0
PJS1_k127_4197986_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K05296 - 1.1.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 470.0
PJS1_k127_4197986_1 EthD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005014 296.0
PJS1_k127_4197986_2 Protein of unknown function (DUF1499) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001068 276.0
PJS1_k127_4197986_3 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003128 270.0
PJS1_k127_4197986_4 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 GO:0003674,GO:0003824,GO:0004844,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000741 208.0
PJS1_k127_4214502_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 8.008e-274 846.0
PJS1_k127_4214502_1 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 565.0
PJS1_k127_4214502_2 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005049 411.0
PJS1_k127_4214502_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00019 - 1.1.1.30 0.000000000000004366 76.0
PJS1_k127_4224309_0 Histidine kinase K20975 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 602.0
PJS1_k127_4224309_1 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002816 272.0
PJS1_k127_4224309_2 FIST N domain - - - 0.00000000000000000000000000000000000000000000000000223 186.0
PJS1_k127_4227078_0 LuxR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 586.0
PJS1_k127_4227078_1 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007751 333.0
PJS1_k127_4227078_2 Glutathione S-transferase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003483 246.0
PJS1_k127_4227078_3 Signal transduction histidine kinase - - - 0.00000000002082 70.0
PJS1_k127_4233972_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K12276 - - 4.905e-228 719.0
PJS1_k127_4233972_1 Type II secretory pathway, component K12282 - - 3.133e-200 636.0
PJS1_k127_4233972_10 Pilus assembly protein K12279 - - 0.0000000003186 66.0
PJS1_k127_4233972_2 COG1459 Type II secretory pathway, component PulF K02505,K12278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008987 408.0
PJS1_k127_4233972_3 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K12280 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 364.0
PJS1_k127_4233972_5 Type II secretory pathway, component ExeA K12283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003353 274.0
PJS1_k127_4233972_6 Type II and III secretion system protein K12282 - - 0.0000000000000000000000000002588 131.0
PJS1_k127_4233972_7 Prokaryotic N-terminal methylation motif K10924 - - 0.0000000000000000000000000006174 118.0
PJS1_k127_4233972_8 general secretion pathway protein - - - 0.00000000000001176 79.0
PJS1_k127_4233972_9 Prokaryotic N-terminal methylation motif - - - 0.00000000002477 70.0
PJS1_k127_4258595_0 flagellar hook-associated protein K02396 - - 0.0 1447.0
PJS1_k127_4258595_1 Rod binding protein K02395 - - 3.398e-200 629.0
PJS1_k127_4291765_0 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006576 502.0
PJS1_k127_4291765_1 Metal-dependent hydrolases of the beta-lactamase superfamily III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 456.0
PJS1_k127_4291765_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 453.0
PJS1_k127_4291765_3 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 441.0
PJS1_k127_4291765_4 Yip1 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008215 398.0
PJS1_k127_4291765_5 Methyltransferase - - - 0.00002161 46.0
PJS1_k127_4314051_0 - - - - 0.0 1558.0
PJS1_k127_4314051_1 exporters of the RND superfamily K07003 - - 0.0 1378.0
PJS1_k127_4314051_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.0 1154.0
PJS1_k127_4314051_3 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 3.065e-293 900.0
PJS1_k127_4314051_4 UPF0056 membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000000000000000006529 230.0
PJS1_k127_4314051_5 Domain of unknown function (DUF4212) - - - 0.000000000000000000000000000000000000000000000000000145 185.0
PJS1_k127_4351304_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0 1056.0
PJS1_k127_4351304_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 366.0
PJS1_k127_4351304_2 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000001104 261.0
PJS1_k127_4351304_3 Could be involved in insertion of integral membrane proteins into the membrane K08998 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0031224,GO:0031226,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.000000000000000000000002993 104.0
PJS1_k127_4351304_4 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000000003916 87.0
PJS1_k127_4352432_0 Glutamine synthetase type III N terminal K01915 - 6.3.1.2 0.0 1410.0
PJS1_k127_4352432_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 3.984e-210 656.0
PJS1_k127_4352432_2 including N-acetylases of ribosomal proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001388 254.0
PJS1_k127_4352432_4 acetyltransferase - - - 0.000000000000000000000000000000000000000000238 162.0
PJS1_k127_4353047_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1367.0
PJS1_k127_4353047_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000003579 109.0
PJS1_k127_4353047_2 Beta-galactosidase - - - 0.00000000000000000000002607 101.0
PJS1_k127_435830_0 COG4774 Outer membrane receptor for monomeric catechols K16090 - - 0.0 1502.0
PJS1_k127_435830_1 7TMR-DISM extracellular 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 450.0
PJS1_k127_435830_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006132 447.0
PJS1_k127_435830_3 MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 380.0
PJS1_k127_435830_4 biopolymer transport protein K03559 - - 0.000000000000000000000000000000000000000000000000000000000000001535 220.0
PJS1_k127_435830_5 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000001993 90.0
PJS1_k127_4360677_0 GH3 auxin-responsive promoter - - - 0.0 1101.0
PJS1_k127_4360677_1 - - - - 1.438e-212 663.0
PJS1_k127_4360677_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 579.0
PJS1_k127_4360677_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000005494 178.0
PJS1_k127_4365840_0 COG3001 Fructosamine-3-kinase - - - 1.245e-200 626.0
PJS1_k127_4365840_1 ParD-like antitoxin of type II bacterial toxin-antitoxin system - - - 0.000000000000000000000000000000000000000000000000003666 183.0
PJS1_k127_4365840_2 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000003251 115.0
PJS1_k127_4367114_0 COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid K16088 - - 0.0 1456.0
PJS1_k127_4367114_1 PepSY-associated TM region - - - 0.0 1078.0
PJS1_k127_4367114_2 - - - - 0.000000000000000000000000000000000000000000000006449 173.0
PJS1_k127_4382946_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 1.157e-296 912.0
PJS1_k127_4382946_1 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004735 396.0
PJS1_k127_4382946_2 Protein of unknown function (DUF98) K03181 - 4.1.3.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 390.0
PJS1_k127_4382946_3 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005494 359.0
PJS1_k127_4382946_4 Phosphopantetheine attachment site K02078 - - 0.00000000000000000000000000000000000003099 143.0
PJS1_k127_4382946_5 PFAM sulfotransferase - - - 0.0000000000000000000000000000000000002698 139.0
PJS1_k127_4396632_0 Belongs to the phosphatidylserine decarboxylase family K01613 - 4.1.1.65 1.138e-301 928.0
PJS1_k127_4396632_1 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 327.0
PJS1_k127_4396632_2 DTW K05812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006703 260.0
PJS1_k127_4402034_0 Peptidase M23 - - - 2.971e-272 839.0
PJS1_k127_4402034_1 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 2.021e-205 642.0
PJS1_k127_4402034_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 478.0
PJS1_k127_4402034_3 - K09004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001574 259.0
PJS1_k127_4402034_4 iron-sulfur cluster insertion protein erpA K15724 - - 0.0000000000000000000000000000000000000000000000000000000000000000001871 230.0
PJS1_k127_4402034_5 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000002286 196.0
PJS1_k127_4402034_6 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000002898 150.0
PJS1_k127_4402034_7 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000001846 143.0
PJS1_k127_4407311_0 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 4.962e-222 693.0
PJS1_k127_4407311_1 Beta-galactosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000964 342.0
PJS1_k127_4408468_0 DNA helicase K03654 - 3.6.4.12 4.558e-305 936.0
PJS1_k127_4408468_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 574.0
PJS1_k127_4408468_2 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 399.0
PJS1_k127_4411739_0 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95 C K02336 - 2.7.7.7 2.499e-309 948.0
PJS1_k127_4411739_1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007471 514.0
PJS1_k127_4411739_2 Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008679 290.0
PJS1_k127_4411739_3 Pentapeptide repeats (8 copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000008704 222.0
PJS1_k127_441682_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 2.604e-299 918.0
PJS1_k127_441682_1 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000001222 263.0
PJS1_k127_441682_2 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family K02503 - - 0.00000000000000000000000000000000000000000000000000000000000000003176 223.0
PJS1_k127_441682_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000001665 218.0
PJS1_k127_441682_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000000000000000000000000000000000000000002572 209.0
PJS1_k127_441682_5 Phosphoribosyl-ATP K01523 - 3.6.1.31 0.000000000000000000000000000000000000000000000000000000000004932 209.0
PJS1_k127_441682_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000000000000000000002832 135.0
PJS1_k127_4416878_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K20034 - 6.2.1.44 0.0 1097.0
PJS1_k127_4416878_1 Predicted metal-dependent hydrolase K07044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 606.0
PJS1_k127_4416878_2 Predicted metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000923 547.0
PJS1_k127_4416878_3 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000003263 108.0
PJS1_k127_441691_0 RHS Repeat - - - 7.537e-274 853.0
PJS1_k127_441691_1 Protein of unknown function (DUF1456) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 292.0
PJS1_k127_441691_2 - - - - 0.0000000000000000000000000000000000000000000000000000001715 195.0
PJS1_k127_441691_3 Transglycosylase associated protein - - - 0.0000000000000000000000000000000000000008877 148.0
PJS1_k127_441691_4 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.00000000000000000000000000000000000005888 147.0
PJS1_k127_441691_5 COG3806 Anti-sigma factor - - - 0.00000000000335 67.0
PJS1_k127_4435727_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1245.0
PJS1_k127_4435727_1 differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs K00648,K16872 - 2.3.1.180,2.3.1.207 2.656e-240 743.0
PJS1_k127_4435727_2 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 409.0
PJS1_k127_4435727_3 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000002605 251.0
PJS1_k127_4435727_4 RNA-binding protein containing KH domain, possibly ribosomal protein K07574 - - 0.000000000000000000000000000000000000000000000000000008199 191.0
PJS1_k127_4435727_5 Thioesterase superfamily - - - 0.00000001488 56.0
PJS1_k127_4439136_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 1.692e-214 669.0
PJS1_k127_4439136_1 DNA polymerase III subunit delta K02341 - 2.7.7.7 2.458e-194 606.0
PJS1_k127_4439136_2 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K02619 - 4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 519.0
PJS1_k127_4439136_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 398.0
PJS1_k127_4448529_0 Arabinose-binding domain of AraC transcription regulator, N-term - - - 6.02e-204 636.0
PJS1_k127_4448529_1 forms a homodimer and then a multimeric complex with NrdA K00526 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 410.0
PJS1_k127_4448529_2 2Fe-2S iron-sulfur cluster binding domain K11107 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 357.0
PJS1_k127_4448529_3 Peroxiredoxin K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008503 311.0
PJS1_k127_4448529_4 Protein of unknown function (DUF962) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004972 295.0
PJS1_k127_4448529_5 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003188 244.0
PJS1_k127_4456959_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 3.937e-301 929.0
PJS1_k127_4456959_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.431e-227 705.0
PJS1_k127_4483037_0 COG0436 Aspartate tyrosine aromatic aminotransferase K12252,K14261 - 2.6.1.84 5.386e-267 822.0
PJS1_k127_4483037_1 homoserine dehydrogenase K00003 - 1.1.1.3 2.544e-265 819.0
PJS1_k127_4483037_2 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 579.0
PJS1_k127_4483037_3 of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004636 565.0
PJS1_k127_4483037_4 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 377.0
PJS1_k127_4483037_5 Amino acid-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 307.0
PJS1_k127_4483037_6 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.00000000000000000000000000000000000000000000000000000000000002453 224.0
PJS1_k127_4483037_7 transcriptional regulator - - - 0.000000000005141 66.0
PJS1_k127_4483037_8 Transcriptional regulator K07722 - - 0.0000002412 59.0
PJS1_k127_4500103_0 Putative amidoligase enzyme (DUF2126) - - - 0.0 2333.0
PJS1_k127_4500103_1 Circularly permuted ATP-grasp type 2 - - - 0.0 1055.0
PJS1_k127_4500103_2 Circularly permuted ATP-grasp type 2 - - - 1.799e-282 867.0
PJS1_k127_4500103_3 A predicted alpha-helical domain with a conserved ER motif. - - - 1.518e-200 625.0
PJS1_k127_4504287_0 polysaccharide deacetylase - - - 5.812e-213 664.0
PJS1_k127_4504287_1 Metal-dependent hydrolase K07043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 467.0
PJS1_k127_4504287_2 DNA-J related protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000085 430.0
PJS1_k127_4504287_3 Belongs to the UPF0149 family K07039 - - 0.00000000000000000000000000000000000000000000000000000000000000008438 223.0
PJS1_k127_4504287_4 Putative transmembrane protein (PGPGW) - - - 0.0000000000000000000000002881 104.0
PJS1_k127_4505290_0 COG3639 ABC-type phosphate phosphonate transport system, permease component K02042 - - 2.386e-307 945.0
PJS1_k127_4505290_1 Arabinose-binding domain of AraC transcription regulator, N-term - - - 6.979e-204 636.0
PJS1_k127_4505290_2 sterol desaturase - - - 1.213e-194 606.0
PJS1_k127_4505290_3 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 577.0
PJS1_k127_4505290_4 acetylesterase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 477.0
PJS1_k127_4505290_5 ABC transporter, ATP-binding protein K02041 - 3.6.3.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042 443.0
PJS1_k127_4505290_6 PFAM sulfotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007651 254.0
PJS1_k127_4505290_7 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.0000000000000000000000000000000005984 130.0
PJS1_k127_4514965_0 Major facilitator superfamily - - - 1.495e-273 844.0
PJS1_k127_4514965_1 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 1.145e-238 739.0
PJS1_k127_4514965_10 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 328.0
PJS1_k127_4514965_12 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576 - 0.000000000000000000000000000001148 129.0
PJS1_k127_4514965_13 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000005443 109.0
PJS1_k127_4514965_2 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 7.34e-224 694.0
PJS1_k127_4514965_3 RNA polymerase sigma factor RpoS K03087 - - 1.459e-194 609.0
PJS1_k127_4514965_4 membrane K08974 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007619 562.0
PJS1_k127_4514965_5 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 496.0
PJS1_k127_4514965_6 COG0739 Membrane proteins related to metalloendopeptidases K06194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000993 496.0
PJS1_k127_4514965_7 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 492.0
PJS1_k127_4514965_8 LuxR family transcriptional regulator K04333,K20918 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005493 442.0
PJS1_k127_4514965_9 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 441.0
PJS1_k127_4525022_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 2023.0
PJS1_k127_4525022_1 Acetyl-coenzyme A transporter 1 K08218 - - 1.969e-274 847.0
PJS1_k127_4525022_10 transcriptional regulator - - - 0.00000000000000008707 89.0
PJS1_k127_4525022_11 His Kinase A (phosphoacceptor) domain - - - 0.00000000006933 63.0
PJS1_k127_4525022_3 LysR substrate binding domain - - - 9.088e-201 626.0
PJS1_k127_4525022_4 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 517.0
PJS1_k127_4525022_5 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 498.0
PJS1_k127_4525022_6 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 453.0
PJS1_k127_4525022_7 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 310.0
PJS1_k127_4525022_9 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000000000000000000000000002311 174.0
PJS1_k127_453015_0 zinc metalloprotease K11749 - - 1.523e-272 841.0
PJS1_k127_453015_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 443.0
PJS1_k127_453015_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 332.0
PJS1_k127_4531030_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 1.865e-313 961.0
PJS1_k127_4531030_1 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 4.518e-228 709.0
PJS1_k127_4531030_2 Belongs to the ompA family K03286,K20276 - - 1.947e-194 608.0
PJS1_k127_4531030_3 nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006546 447.0
PJS1_k127_4531030_4 Permease K07091 - - 0.00000000000000000000000000000003513 130.0
PJS1_k127_45390_0 Rod shape-determining protein K03569 - - 2.751e-214 668.0
PJS1_k127_45390_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 2.728e-197 616.0
PJS1_k127_45390_2 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004924 521.0
PJS1_k127_45390_3 Involved in the processing of the 5'end of 16S rRNA K08301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 475.0
PJS1_k127_45390_4 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 352.0
PJS1_k127_45390_5 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 302.0
PJS1_k127_45390_6 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000003673 188.0
PJS1_k127_4539989_0 Ompa motb domain protein - - - 0.0 2529.0
PJS1_k127_4539989_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 320.0
PJS1_k127_4551071_0 Protein of unknown function (DUF3494) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006803 554.0
PJS1_k127_4551071_1 belongs to the aldehyde dehydrogenase family K22445 - 1.2.99.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 335.0
PJS1_k127_4551071_2 tRNA (adenine(22)-N(1))-methyltransferase K06967 - 2.1.1.217 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 299.0
PJS1_k127_4554469_0 Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 503.0
PJS1_k127_4554469_1 Nucleotidyl transferase AbiEii toxin, Type IV TA system K09144 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 487.0
PJS1_k127_4554469_2 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005223 386.0
PJS1_k127_4554469_3 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009875 340.0
PJS1_k127_4563327_0 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 3.531e-225 718.0
PJS1_k127_4563327_1 PepSY-associated TM region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001028 265.0
PJS1_k127_4563327_3 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH - - - 0.00000002186 59.0
PJS1_k127_4563327_4 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH - - - 0.00005972 45.0
PJS1_k127_456448_0 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008194,GO:0008289,GO:0008610,GO:0008654,GO:0008915,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0019637,GO:0019897,GO:0019898,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 1.025e-198 623.0
PJS1_k127_456448_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0008780,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006409 488.0
PJS1_k127_456448_2 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0008693,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019171,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0047451,GO:0071704,GO:0072330,GO:1901576 4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 283.0
PJS1_k127_456448_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.0000000000000000000000000000000000000000009087 158.0
PJS1_k127_4566581_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 586.0
PJS1_k127_4566581_1 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002045 285.0
PJS1_k127_4566581_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000002065 152.0
PJS1_k127_4566581_3 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.00000000000000000000005155 110.0
PJS1_k127_4572823_0 Part of a membrane complex involved in electron transport K03615 - - 0.0 1321.0
PJS1_k127_4572823_1 Part of a membrane complex involved in electron transport K03614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005577 573.0
PJS1_k127_4572823_2 Part of a membrane complex involved in electron transport K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 413.0
PJS1_k127_4572823_3 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005387 377.0
PJS1_k127_4572823_4 cation transport ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 347.0
PJS1_k127_4572823_5 Part of a membrane complex involved in electron transport K03614 - - 0.000000000000000000000000000005353 118.0
PJS1_k127_4572823_6 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000000000003689 99.0
PJS1_k127_4583770_0 Glycosyltransferase Family 4 - - - 2.448e-261 807.0
PJS1_k127_4583770_1 GHMP kinases C terminal K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007096 459.0
PJS1_k127_4583770_2 chlorophyll binding - - - 0.000000000000000000000000000000000000000000000000000000000000000003878 228.0
PJS1_k127_4600846_0 esterase of the alpha-beta hydrolase superfamily K07001 - - 3.78e-244 754.0
PJS1_k127_4600846_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 4.473e-206 642.0
PJS1_k127_4600846_2 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 499.0
PJS1_k127_4600846_3 Riboflavin synthase K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 422.0
PJS1_k127_4600846_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008381 394.0
PJS1_k127_4600846_5 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 319.0
PJS1_k127_4600846_6 Glutaredoxin - - - 0.000000000000000000000000000000000000000000000001395 174.0
PJS1_k127_4618082_0 Animal haem peroxidase - - - 0.0 1865.0
PJS1_k127_4618082_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000008973 224.0
PJS1_k127_4620061_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1182.0
PJS1_k127_4620061_1 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 1.28e-242 751.0
PJS1_k127_4620061_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 589.0
PJS1_k127_4620061_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 440.0
PJS1_k127_4620061_4 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006401 410.0
PJS1_k127_4620061_6 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000003329 167.0
PJS1_k127_4626566_0 Histidine kinase K07636 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0016036,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031224,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0035556,GO:0036211,GO:0042578,GO:0042594,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071496,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006452 578.0
PJS1_k127_4626566_1 High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway K06203 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 522.0
PJS1_k127_4626566_2 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 491.0
PJS1_k127_4626566_3 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 460.0
PJS1_k127_4626566_5 Protein of unknown function (DUF3392) - - - 0.000000000000000000000000000000000000000000000000000000001677 201.0
PJS1_k127_4626566_6 Response regulator receiver domain K03413 - - 0.0000000000000000008303 93.0
PJS1_k127_4650235_0 Histidine kinase - - - 0.0 1469.0
PJS1_k127_4650235_1 protein conserved in bacteria K09859 - - 0.0 1178.0
PJS1_k127_4650235_2 fatty acid desaturase - - - 1.723e-243 752.0
PJS1_k127_4650235_3 LPP20 lipoprotein - - - 8.628e-214 665.0
PJS1_k127_4650235_4 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008061 533.0
PJS1_k127_4650235_5 Peptidoglycan-synthase activator LpoB K07337 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 382.0
PJS1_k127_4650235_6 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001306 254.0
PJS1_k127_4660081_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.0 1010.0
PJS1_k127_4660081_1 COG0477 Permeases of the major facilitator superfamily - - - 3.466e-249 769.0
PJS1_k127_4660081_11 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000000001509 141.0
PJS1_k127_4660081_12 Domain of unknown function (DUF1924) - - - 0.0000000000000000000000000004668 114.0
PJS1_k127_4660081_13 ATP synthase K02116 - - 0.0000000000000000000000001553 109.0
PJS1_k127_4660081_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 595.0
PJS1_k127_4660081_3 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005439 594.0
PJS1_k127_4660081_4 Chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006414 513.0
PJS1_k127_4660081_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 482.0
PJS1_k127_4660081_6 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 429.0
PJS1_k127_4660081_7 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 405.0
PJS1_k127_4660081_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009001 327.0
PJS1_k127_4660081_9 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000000000000000000000000000001912 235.0
PJS1_k127_4660212_0 protein of Photorhabdus and some similarities with - - - 3.556e-241 784.0
PJS1_k127_4660212_1 protein of Photorhabdus and some similarities with - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 636.0
PJS1_k127_4660212_2 COG3209 Rhs family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005007 347.0
PJS1_k127_468021_0 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K12136 - - 0.0 1189.0
PJS1_k127_468021_1 biosynthesis protein HemY K02498 - - 8.473e-236 731.0
PJS1_k127_468021_2 enzyme of heme biosynthesis K02496 - 2.1.1.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 553.0
PJS1_k127_468276_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 4.447e-225 699.0
PJS1_k127_468276_1 Protein of unknown function (DUF1254) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 400.0
PJS1_k127_468276_2 Transcriptional regulator - - - 0.000000000000000004089 96.0
PJS1_k127_4690611_0 sequence-specific DNA binding K02099 GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 - 2.074e-223 693.0
PJS1_k127_4690611_1 Immune inhibitor A peptidase M6 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006314 424.0
PJS1_k127_4690611_3 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 369.0
PJS1_k127_4690611_4 membrane protein (homolog of Drosophila rhomboid) - - - 0.0000000000000000000000000003247 121.0
PJS1_k127_4695355_0 Belongs to the beta-ketoacyl-ACP synthases family K18473 - 2.3.1.180 1.512e-256 794.0
PJS1_k127_4695355_1 WYL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 490.0
PJS1_k127_4695355_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 421.0
PJS1_k127_4695355_3 Domain of unknown function (DUF3127) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 278.0
PJS1_k127_469717_0 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 6.846e-250 771.0
PJS1_k127_469717_1 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 429.0
PJS1_k127_469717_2 Belongs to the UPF0260 family K09160 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 326.0
PJS1_k127_469717_3 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 304.0
PJS1_k127_469717_5 Von Willebrand factor - - - 0.00000000000000000000000000002548 117.0
PJS1_k127_469717_6 YcgL domain-containing protein K09902 - - 0.0000000000000000000000004289 107.0
PJS1_k127_4727556_0 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box) 5'-GGA TG GA-3' K03556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007755 604.0
PJS1_k127_4727556_1 Belongs to the aldehyde dehydrogenase family K00128,K22445 - 1.2.1.3,1.2.99.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008261 476.0
PJS1_k127_4727556_2 Predicted metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 361.0
PJS1_k127_4727556_3 MMPL family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 290.0
PJS1_k127_4727556_4 - - - - 0.00000000000000000000000000000000000000000004043 166.0
PJS1_k127_4727556_5 Ferredoxin K04755 - - 0.000000000000000000008517 95.0
PJS1_k127_4735072_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0 1338.0
PJS1_k127_4735072_1 COG1960 Acyl-CoA dehydrogenases - - - 8.387e-285 875.0
PJS1_k127_4735072_2 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 4.088e-256 790.0
PJS1_k127_4735072_3 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008032 589.0
PJS1_k127_4735072_4 Belongs to the UPF0246 family K09861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 526.0
PJS1_k127_4735072_5 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007094 528.0
PJS1_k127_4735072_6 Thioesterase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 303.0
PJS1_k127_4735072_7 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0003438 43.0
PJS1_k127_4741983_0 2-oxoglutarate dehydrogenase K00164 - 1.2.4.2 0.0 1929.0
PJS1_k127_4741983_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 2.649e-245 760.0
PJS1_k127_4752089_0 GMC oxidoreductase family - - - 0.0 1116.0
PJS1_k127_4752089_1 belongs to the aldehyde dehydrogenase family K00154 - 1.2.1.68 3.146e-312 957.0
PJS1_k127_4752089_10 COG1309 Transcriptional regulator - - - 0.000000000006014 66.0
PJS1_k127_4752089_2 Protein of unknown function (DUF3080) - - - 5.765e-213 663.0
PJS1_k127_4752089_3 S1/P1 Nuclease K05986 - 3.1.30.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 477.0
PJS1_k127_4752089_4 Bacterial transcriptional repressor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 424.0
PJS1_k127_4752089_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 354.0
PJS1_k127_4752089_6 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 325.0
PJS1_k127_4752089_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001663 222.0
PJS1_k127_4752089_8 Ferredoxin - - - 0.00000000000000000000000000000000000000000000000000002755 187.0
PJS1_k127_4752089_9 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000001509 108.0
PJS1_k127_4765052_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1606.0
PJS1_k127_4765052_1 Protein of unknown function (DUF3530) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 596.0
PJS1_k127_4765052_2 Belongs to the ribose-phosphate pyrophosphokinase family K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 556.0
PJS1_k127_4765052_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 518.0
PJS1_k127_4765052_4 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 512.0
PJS1_k127_4765052_5 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00758 - 2.4.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 501.0
PJS1_k127_4765052_6 Methyl-accepting chemotaxis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008377 361.0
PJS1_k127_4765052_7 protein conserved in bacteria K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000002285 233.0
PJS1_k127_4765052_8 HAD-hyrolase-like K01091 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0031404,GO:0033554,GO:0034641,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.18 0.00000000000000000000000000000000000000000000000000000007811 203.0
PJS1_k127_4766127_0 Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate K00265 - 1.4.1.13,1.4.1.14 0.0 2987.0
PJS1_k127_4766127_1 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 1.763e-315 966.0
PJS1_k127_4766127_2 AAA domain K03112 - - 5.426e-232 726.0
PJS1_k127_4766127_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004899 309.0
PJS1_k127_4766127_4 oxidoreductase activity - - - 0.000000000000000000000001814 105.0
PJS1_k127_4767040_0 Imelysin K07231 - - 7.883e-230 715.0
PJS1_k127_4767040_1 N2,N2-dimethylguanosine tRNA methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 334.0
PJS1_k127_4767040_2 phosphoserine phosphatase - - - 0.000000000000002102 75.0
PJS1_k127_4767047_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 6.581e-299 918.0
PJS1_k127_4767047_1 Belongs to the thiolase family K00626 - 2.3.1.9 2.908e-275 848.0
PJS1_k127_4767047_2 Acetyl-coenzyme A transporter 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006076 505.0
PJS1_k127_4767047_3 SpoU rRNA Methylase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 341.0
PJS1_k127_4767047_4 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002398 277.0
PJS1_k127_4767047_5 EF hand - - - 0.0000000000000000000000000000000000000000000000000000000000000000000416 232.0
PJS1_k127_4770871_0 cytochrome P450 - - - 2.075e-218 687.0
PJS1_k127_4770871_1 Glutathione S-transferase, N-terminal domain K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009636 381.0
PJS1_k127_4770871_2 COG1309 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000009786 190.0
PJS1_k127_4770871_3 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000000000000000002847 155.0
PJS1_k127_4770871_4 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K02182,K13776 - 6.2.1.48 0.00004633 46.0
PJS1_k127_477728_0 Tfp pilus assembly protein, ATPase PilU K02670 - - 7.493e-214 668.0
PJS1_k127_477728_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 1.351e-200 627.0
PJS1_k127_477728_2 Spermine/spermidine synthase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008682 370.0
PJS1_k127_477728_3 Putative Flp pilus-assembly TadE/G-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 347.0
PJS1_k127_477728_4 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0000018,GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008301,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030554,GO:0030983,GO:0031323,GO:0032136,GO:0032300,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000008307 178.0
PJS1_k127_4800218_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006843 606.0
PJS1_k127_4800218_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K16050 - 3.7.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 481.0
PJS1_k127_4800218_2 Sulfatase K01130 - 3.1.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009611 480.0
PJS1_k127_4800218_3 COG0346 Lactoylglutathione lyase and related lyases K16049 - 1.13.11.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 472.0
PJS1_k127_4800218_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 457.0
PJS1_k127_4800218_5 Diacylglycerol acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 291.0
PJS1_k127_4800218_6 Sulfatase K01130 - 3.1.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000002513 243.0
PJS1_k127_4800218_7 PFAM Sodium Bile acid symporter family K03453 - - 0.00000000000000000000000000000000000000000000007418 179.0
PJS1_k127_4821568_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 569.0
PJS1_k127_4821568_1 beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 460.0
PJS1_k127_4821568_2 Gram-negative-bacterium-type cell outer membrane assembly K07287 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045229,GO:0061024,GO:0071709,GO:0071840,GO:0071944,GO:0098552,GO:0098796,GO:1990063 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 386.0
PJS1_k127_4821568_3 Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000006735 222.0
PJS1_k127_4848983_0 Type II and III secretion system protein K02507,K02666 - - 0.0 1286.0
PJS1_k127_4848983_1 Pilus assembly protein PilO K02664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008913 415.0
PJS1_k127_4848983_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 402.0
PJS1_k127_4848983_3 pilus assembly protein PilN K02663 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 349.0
PJS1_k127_4848983_4 pilus assembly protein PilP K02665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 343.0
PJS1_k127_4848983_5 Pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000692 308.0
PJS1_k127_4848983_6 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000000000000000000001027 240.0
PJS1_k127_4865514_0 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 4.115e-304 935.0
PJS1_k127_4865514_1 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 379.0
PJS1_k127_4865514_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000009686 121.0
PJS1_k127_4865514_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000451 94.0
PJS1_k127_4867339_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1547.0
PJS1_k127_4867339_1 Long-chain fatty acid transport protein - - - 0.0 1094.0
PJS1_k127_4867339_2 Sh3 type 3 domain protein - - - 2.315e-212 661.0
PJS1_k127_4867339_3 double-glycine peptidase K06992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005177 603.0
PJS1_k127_4867339_4 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 560.0
PJS1_k127_4867339_5 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.00000000000000000000000000000000000000000000000000000000000000000001392 243.0
PJS1_k127_4867339_6 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000001251 194.0
PJS1_k127_4868545_0 MotA TolQ ExbB proton channel K03561 - - 3.35e-273 843.0
PJS1_k127_4868545_1 Protein of unknown function (DUF3450) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 488.0
PJS1_k127_4868545_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006286 408.0
PJS1_k127_4868545_3 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006052 344.0
PJS1_k127_4868545_4 Biopolymer K03559 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008702 261.0
PJS1_k127_4885316_0 Belongs to the GPI family K01810 - 5.3.1.9 0.0 1137.0
PJS1_k127_4885316_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 547.0
PJS1_k127_4885316_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008924 516.0
PJS1_k127_4885316_3 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000007416 258.0
PJS1_k127_4885316_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000001367 178.0
PJS1_k127_4887772_0 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 564.0
PJS1_k127_4887772_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009704 417.0
PJS1_k127_4887772_2 COG4240 Predicted kinase K15918 - 2.7.1.31 0.00000000000000000000000000000000008057 134.0
PJS1_k127_4897358_0 acyl-CoA dehydrogenase - - - 0.0 1227.0
PJS1_k127_4897358_1 SprA-related family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 465.0
PJS1_k127_4897358_2 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 290.0
PJS1_k127_4902439_0 acyl-CoA dehydrogenase - - - 0.0 1135.0
PJS1_k127_4902439_1 protein related to deoxyribodipyrimidine photolyase K06876 - - 1.037e-299 919.0
PJS1_k127_4902439_2 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K07516 - 1.1.1.35 4.108e-270 832.0
PJS1_k127_4923784_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1471.0
PJS1_k127_4923784_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 4.608e-231 716.0
PJS1_k127_4923784_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 443.0
PJS1_k127_4923784_3 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000544 327.0
PJS1_k127_4923784_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 302.0
PJS1_k127_4923784_5 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000000000000000111 154.0
PJS1_k127_4944250_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 7.359e-257 792.0
PJS1_k127_4944250_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 6.177e-238 736.0
PJS1_k127_4944250_2 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 554.0
PJS1_k127_4944250_3 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000000000000000000000003183 164.0
PJS1_k127_4953585_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 1.527e-245 758.0
PJS1_k127_4953585_1 Tfp pilus assembly protein K08086 - - 3.698e-234 729.0
PJS1_k127_4953585_2 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 2.928e-225 699.0
PJS1_k127_4953585_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 442.0
PJS1_k127_4953585_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000375 172.0
PJS1_k127_4957475_0 protein involved in exopolysaccharide biosynthesis K16554,K16692 GO:0000271,GO:0003674,GO:0003824,GO:0004672,GO:0004713,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0005975,GO:0005976,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016020,GO:0016021,GO:0016051,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0018108,GO:0018193,GO:0018212,GO:0019538,GO:0031224,GO:0031226,GO:0033692,GO:0034637,GO:0034645,GO:0036211,GO:0038083,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046377,GO:0046777,GO:0071704,GO:0071944,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 - 0.0 1183.0
PJS1_k127_4957475_1 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006154 601.0
PJS1_k127_4957475_2 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 316.0
PJS1_k127_4957475_3 Capsule assembly protein Wzi - - - 0.000000000000000000000000000000000000000000000000000000000183 209.0
PJS1_k127_4957475_4 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000287 176.0
PJS1_k127_4957475_5 endonuclease containing a URI domain K07461 - - 0.0000000000000000000000000000000004585 133.0
PJS1_k127_4962404_0 Catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP K00928 - 2.7.2.4 2.842e-314 964.0
PJS1_k127_4962404_1 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 4.386e-262 807.0
PJS1_k127_4962404_10 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000004831 220.0
PJS1_k127_4962404_12 DUF167 K09131 - - 0.00000000000000000000000000000000000000000000003067 170.0
PJS1_k127_4962404_13 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 0.000000000000000000000000000000001006 130.0
PJS1_k127_4962404_2 Involved in the biosynthesis of porphyrin-containing compound - - - 7.581e-240 742.0
PJS1_k127_4962404_3 esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003095 548.0
PJS1_k127_4962404_4 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 407.0
PJS1_k127_4962404_5 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 385.0
PJS1_k127_4962404_6 Integral membrane protein K02221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 353.0
PJS1_k127_4962404_7 Domain of unknown function (DUF4426) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 296.0
PJS1_k127_4962404_8 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007187 275.0
PJS1_k127_4962404_9 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008546 285.0
PJS1_k127_4965405_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 2.657e-279 864.0
PJS1_k127_4965405_1 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 1.681e-231 718.0
PJS1_k127_4965405_2 Role in flagellar biosynthesis K02421 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008083 473.0
PJS1_k127_4965405_3 Plays a role in the flagellum-specific transport system K02419 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 451.0
PJS1_k127_4965405_4 flagellar K02418 - - 0.00000000000000000000000000000000000000000000000000000008842 196.0
PJS1_k127_4965405_5 Flagellar biosynthetic protein FliQ K02420 - - 0.000000000000000000000000000000000000000000003026 165.0
PJS1_k127_4979130_0 COG2148 Sugar transferases involved in lipopolysaccharide synthesis K03606,K21303 - 2.7.8.40 7.118e-298 915.0
PJS1_k127_4979130_1 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 4.749e-297 913.0
PJS1_k127_4979130_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 8.526e-247 763.0
PJS1_k127_4979130_3 Putative beta-barrel porin 2 K20920 - - 4.093e-239 741.0
PJS1_k127_4979130_4 Polysaccharide biosynthesis/export protein K20988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 351.0
PJS1_k127_4979130_5 protein involved in exopolysaccharide biosynthesis K16554 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 290.0
PJS1_k127_4979130_7 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000836 130.0
PJS1_k127_4981088_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0 1146.0
PJS1_k127_4981088_1 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 7.932e-228 707.0
PJS1_k127_4981088_2 transcriptional regulator K03717 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 602.0
PJS1_k127_4981088_3 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 567.0
PJS1_k127_4981088_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 554.0
PJS1_k127_4981088_5 Belongs to the BI1 family K19416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 357.0
PJS1_k127_4981088_6 Preprotein translocase subunit YajC K03210 - - 0.000000000000000000000000000000000000000000000000000000000000000001736 228.0
PJS1_k127_4981088_7 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000002481 116.0
PJS1_k127_4981203_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 516.0
PJS1_k127_4981203_1 Abortive - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 410.0
PJS1_k127_4981203_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 399.0
PJS1_k127_4986584_0 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 - - 2.389e-286 880.0
PJS1_k127_4986584_1 ABC-type oligopeptide transport system, periplasmic component K13893 - - 1.939e-274 850.0
PJS1_k127_4986584_2 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 327.0
PJS1_k127_5001511_0 The M ring may be actively involved in energy transduction K02409 - - 0.0 1037.0
PJS1_k127_5001511_1 Flagellar regulatory protein FleQ K10941 - - 1.212e-314 965.0
PJS1_k127_5001511_2 response regulator K10943 - - 5.196e-289 889.0
PJS1_k127_5001511_3 His Kinase A (phosphoacceptor) domain K10942 - 2.7.13.3 2.913e-240 745.0
PJS1_k127_5001511_4 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 405.0
PJS1_k127_5001511_5 flagellar protein FliS K02422 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 283.0
PJS1_k127_5001511_6 Flagellar hook-basal body complex protein FliE K02408 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001434 273.0
PJS1_k127_5003739_0 due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm K01869 - 6.1.1.4 1.584e-297 912.0
PJS1_k127_5003739_1 phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 564.0
PJS1_k127_5003739_2 FMN_bind - - - 0.00000000000000003155 83.0
PJS1_k127_5009144_0 Methyl-accepting chemotaxis K03406 - - 0.0 1394.0
PJS1_k127_5009144_1 Chemotaxis protein histidine kinase and related K03407 - 2.7.13.3 0.0 1204.0
PJS1_k127_5009144_2 Chemotaxis signal transduction protein K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006175 327.0
PJS1_k127_5009144_3 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 301.0
PJS1_k127_5009144_4 Involved in type III protein export during flagellum assembly K02412 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 286.0
PJS1_k127_5009144_5 bacterial-type flagellum organization K02413 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002954 277.0
PJS1_k127_5009144_6 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000006488 238.0
PJS1_k127_501026_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K20455 - 4.2.1.117 1.126e-298 917.0
PJS1_k127_501026_1 Belongs to the citrate synthase family K01659 - 2.3.3.5 4.435e-244 755.0
PJS1_k127_501026_2 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000073 585.0
PJS1_k127_501026_3 GntR family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008805 302.0
PJS1_k127_5039806_0 Diguanylate cyclase - - - 0.0 1074.0
PJS1_k127_5039806_1 ABC transporter - - - 0.0 1024.0
PJS1_k127_5039806_2 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.00000000000000000000000000000000001406 135.0
PJS1_k127_5039806_3 Short C-terminal domain - - - 0.00000000000000000000000000001092 120.0
PJS1_k127_5044149_0 Protein involved in outer membrane biogenesis - - - 0.0 1074.0
PJS1_k127_5044149_1 His Kinase A (phosphoacceptor) domain - - - 0.0 1073.0
PJS1_k127_5044149_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 491.0
PJS1_k127_5044149_3 ABC-type branched-chain amino acid transport systems, periplasmic component K11959 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 481.0
PJS1_k127_5044149_4 flavoprotein involved in K transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 345.0
PJS1_k127_5044149_5 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 295.0
PJS1_k127_5080934_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1356.0
PJS1_k127_5080934_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 7.021e-313 979.0
PJS1_k127_5080934_2 Participates in both transcription termination and antitermination K02600 - - 1.267e-310 953.0
PJS1_k127_5080934_3 Taurine catabolism dioxygenase TauD, TfdA family - - - 1.242e-230 715.0
PJS1_k127_5080934_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 5.997e-199 621.0
PJS1_k127_5080934_5 Subtilase family K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 454.0
PJS1_k127_5080934_6 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005724 314.0
PJS1_k127_5080934_7 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004612 264.0
PJS1_k127_5080934_8 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000000000000000000000004849 178.0
PJS1_k127_5086086_0 pyrroloquinoline quinone binding - - - 0.0 2039.0
PJS1_k127_5086086_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 465.0
PJS1_k127_5149774_0 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes K00164 GO:0003674,GO:0003824,GO:0004591,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016624,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045333,GO:0055114,GO:0071704,GO:0072350,GO:1902494,GO:1990204,GO:1990234 1.2.4.2 0.0 1517.0
PJS1_k127_5149774_1 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.8.1.4 2.641e-281 867.0
PJS1_k127_5149774_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5,6.2.1.9 5.345e-225 702.0
PJS1_k127_5149774_3 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 GO:0003674,GO:0003824,GO:0004149,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008289,GO:0009060,GO:0009987,GO:0015980,GO:0016417,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016751,GO:0016999,GO:0017144,GO:0019752,GO:0031405,GO:0031406,GO:0032991,GO:0033293,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045333,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:0140096,GO:1901363,GO:1901681,GO:1902494,GO:1990204,GO:1990234 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 563.0
PJS1_k127_5149774_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009361,GO:0009987,GO:0016310,GO:0019538,GO:0032991,GO:0036211,GO:0042709,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0046777,GO:0071704,GO:1901564,GO:1902494 6.2.1.5 0.00000000000000000009973 88.0
PJS1_k127_5164401_0 membrane - - - 0.0 1707.0
PJS1_k127_5164401_1 Acts as a magnesium transporter K06213 - - 2.16e-270 835.0
PJS1_k127_5164401_2 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 586.0
PJS1_k127_5164401_3 Carbon-nitrogen hydrolase K01501,K11206 - 3.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005065 523.0
PJS1_k127_5164401_4 Belongs to the UPF0307 family K09889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 338.0
PJS1_k127_5164401_5 PTS fructose transporter subunit IIA K02806 - - 0.00000000000000000000000000000000000000000000000000000000825 198.0
PJS1_k127_5164401_6 Phosphocarrier protein HPr K08485,K11189 - - 0.00000000000000000000000000000000000000000000009609 168.0
PJS1_k127_5173517_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1913.0
PJS1_k127_5173517_1 Putative diguanylate phosphodiesterase - - - 1.591e-253 782.0
PJS1_k127_5173517_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 5.305e-235 728.0
PJS1_k127_5173517_3 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001272 254.0
PJS1_k127_518136_0 NADH flavin oxidoreductase K10680 - - 1.629e-199 625.0
PJS1_k127_518136_1 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 459.0
PJS1_k127_518136_2 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 369.0
PJS1_k127_518136_3 cytochrome - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 350.0
PJS1_k127_518136_4 Peptidase propeptide and YPEB domain - - - 0.000000000000000000000000000000000000000000000000003517 182.0
PJS1_k127_5224771_0 Predicted membrane protein (DUF2339) - - - 0.0 1099.0
PJS1_k127_5224771_1 Phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 480.0
PJS1_k127_5224771_2 Imelysin K07338 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005483 277.0
PJS1_k127_5224771_3 Protein of unknown function (DUF1513) K09947 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000028 274.0
PJS1_k127_5234033_0 in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon K13634 - - 1.942e-208 649.0
PJS1_k127_5234033_1 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 510.0
PJS1_k127_5234033_2 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 480.0
PJS1_k127_5252419_0 Pfam:HipA_N K07154 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009638 574.0
PJS1_k127_5252419_1 Transcriptional regulator - - - 0.00000000000000000000000000001618 124.0
PJS1_k127_5252979_0 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014,K16089 - - 1.738e-249 777.0
PJS1_k127_5252979_1 His Kinase A (phosphoacceptor) domain K10125 - 2.7.13.3 1.991e-245 766.0
PJS1_k127_5252979_2 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 356.0
PJS1_k127_5252979_3 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000000000000000000000000000000000003235 208.0
PJS1_k127_5263314_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0 1014.0
PJS1_k127_5263314_1 Diguanylate cyclase - - - 1.379e-223 693.0
PJS1_k127_5263314_2 transcriptional regulator K02521 - - 0.000000000000000000000002101 104.0
PJS1_k127_5272145_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0 1266.0
PJS1_k127_5272145_1 Predicted metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005823 586.0
PJS1_k127_5272145_3 Pfam:HipA_N K07154 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 480.0
PJS1_k127_5272145_4 transcriptional regulator K16137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 367.0
PJS1_k127_5276183_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.0 1067.0
PJS1_k127_5276183_1 Protein of unknown function, DUF547 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 308.0
PJS1_k127_5276183_2 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003773 258.0
PJS1_k127_5276183_3 secreted protein - - - 0.0000000000000000000000000000000000000000000000000000000000008858 220.0
PJS1_k127_5276183_4 protein conserved in bacteria K09931 - - 0.0000000000000000000000000000000000000000000000000000004742 201.0
PJS1_k127_5276183_6 TIGRFAM type I secretion membrane fusion protein, HlyD family K11003 - - 0.0001919 44.0
PJS1_k127_5295504_0 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0 1487.0
PJS1_k127_5295504_1 7TMR-DISM extracellular 2 - - - 0.0 1159.0
PJS1_k127_5295504_2 Protein of unknown function (DUF1501) - - - 5.529e-285 877.0
PJS1_k127_5295504_3 Protein of unknown function (DUF3570) - - - 1.299e-249 771.0
PJS1_k127_5295504_4 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 529.0
PJS1_k127_5295504_5 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 329.0
PJS1_k127_5295504_6 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 308.0
PJS1_k127_5295504_7 Domain of unknown function (DUF4266) - - - 0.0000000000000000000000000000000001273 132.0
PJS1_k127_5298632_0 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0 2689.0
PJS1_k127_5298632_1 ABC transporter ATP-binding protein - - - 0.0 1111.0
PJS1_k127_5298632_10 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.000000000004817 65.0
PJS1_k127_5298632_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 4.978e-277 852.0
PJS1_k127_5298632_3 molybdopterin K03750 - 2.10.1.1 5.468e-251 776.0
PJS1_k127_5298632_4 Metal-dependent hydrolase K07044 - - 2.261e-201 627.0
PJS1_k127_5298632_5 Fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 432.0
PJS1_k127_5298632_6 Metal-dependent hydrolase K07044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 431.0
PJS1_k127_5298632_7 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004998 237.0
PJS1_k127_5298632_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000577 237.0
PJS1_k127_5303462_0 PAS fold - - - 0.0 1816.0
PJS1_k127_5313522_0 Belongs to the ClpA ClpB family K03694 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 - 0.0 1387.0
PJS1_k127_5313522_1 Isocitrate K00031 GO:0003674,GO:0003824,GO:0004448,GO:0004450,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0055114 1.1.1.42 4.59e-243 751.0
PJS1_k127_5313522_2 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 GO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019538,GO:0019941,GO:0030163,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006108 374.0
PJS1_k127_5313522_3 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896,GO:0051087 - 0.0000000000000000000000000000000000000000000000000000000001056 205.0
PJS1_k127_5313522_4 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000001863 150.0
PJS1_k127_5313522_5 COG1278 Cold shock proteins K03704 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006275,GO:0006355,GO:0006950,GO:0008150,GO:0008156,GO:0009266,GO:0009409,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031667,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000002434 129.0
PJS1_k127_5332663_0 GMC oxidoreductase K03333 - 1.1.3.6 4.917e-282 874.0
PJS1_k127_5332663_1 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 453.0
PJS1_k127_5333136_0 FliG C-terminal domain K02410 - - 0.0 1113.0
PJS1_k127_5333136_1 Bacterial protein of unknown function (DUF839) K07093 - - 0.0 1088.0
PJS1_k127_5333136_2 COG1291 Flagellar motor component K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 510.0
PJS1_k127_5333136_3 Flagellar Motor Protein K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 417.0
PJS1_k127_5381009_0 protein related to glutamine synthetase K01915 - 6.3.1.2 0.0 1077.0
PJS1_k127_5381009_1 small GTP-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000003346 217.0
PJS1_k127_5381009_2 response regulator - - - 0.0000000000000000000000000000000000000000000000001021 179.0
PJS1_k127_5381009_3 - - - - 0.00000000000000000000000000000000000000009638 154.0
PJS1_k127_5388200_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0 1047.0
PJS1_k127_5388200_1 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009824 538.0
PJS1_k127_5388200_2 Uncharacterised protein family (UPF0227) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001924 269.0
PJS1_k127_5388200_3 Hpt domain - - - 0.000000000000000000000000002988 115.0
PJS1_k127_5393259_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 3.504e-195 610.0
PJS1_k127_5393259_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 527.0
PJS1_k127_5393259_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 417.0
PJS1_k127_5393259_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 403.0
PJS1_k127_5393259_4 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000001278 218.0
PJS1_k127_5430998_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1911.0
PJS1_k127_5430998_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03169 - 5.99.1.2 0.0 1241.0
PJS1_k127_5430998_2 Transglutaminase-like superfamily - - - 3.972e-316 970.0
PJS1_k127_5430998_3 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 7.707e-204 635.0
PJS1_k127_5430998_4 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 507.0
PJS1_k127_5430998_6 glutamine amidotransferase - - - 0.0000000001592 63.0
PJS1_k127_5430998_7 glutamine amidotransferase - - - 0.0001651 44.0
PJS1_k127_5442342_0 Phosphate acyltransferases - - - 8.186e-221 687.0
PJS1_k127_5442342_2 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009492 526.0
PJS1_k127_5442342_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 519.0
PJS1_k127_5442342_4 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.00000000000000000000000000000000000000000001823 165.0
PJS1_k127_5454298_0 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 476.0
PJS1_k127_5454298_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006866 453.0
PJS1_k127_5454298_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 363.0
PJS1_k127_5454298_3 MOSC N-terminal beta barrel domain K07140 GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009636,GO:0009987,GO:0019748,GO:0042221,GO:0044237,GO:0044248,GO:0050896,GO:0098754 - 0.000000000000000000000001142 107.0
PJS1_k127_5507279_0 mechanosensitive ion channel K16052 - - 1.752e-222 691.0
PJS1_k127_5507279_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 1.707e-204 638.0
PJS1_k127_5507279_2 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 488.0
PJS1_k127_5507279_3 Curli production assembly/transport component CsgG - - - 0.0000000000000000000000000000000000000000000000000000006552 194.0
PJS1_k127_5508380_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 6.769e-233 724.0
PJS1_k127_5508380_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 481.0
PJS1_k127_5508380_2 COG0427 Acetyl-CoA hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006441 464.0
PJS1_k127_5508380_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 313.0
PJS1_k127_5508380_4 QacR-like protein, C-terminal region - - - 0.0008381 44.0
PJS1_k127_5509210_0 helicase K03722 - 3.6.4.12 0.0 1414.0
PJS1_k127_5509210_1 Type II secretory pathway, component ExeA K02450 - - 4.197e-281 868.0
PJS1_k127_5509210_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 599.0
PJS1_k127_5509210_3 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008345 590.0
PJS1_k127_5509210_5 Type II secretion system protein B - - - 0.00000000002162 73.0
PJS1_k127_5522277_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 3.079e-255 788.0
PJS1_k127_5522277_1 Histidine kinase K15011 - 2.7.13.3 3.387e-220 687.0
PJS1_k127_5522277_3 Cobalt uptake substrate-specific transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003102 411.0
PJS1_k127_5522277_4 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 321.0
PJS1_k127_5522277_5 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000000000000000000006636 257.0
PJS1_k127_5526924_0 MotA TolQ ExbB proton channel K03561 - - 4.337e-270 835.0
PJS1_k127_5526924_1 Belongs to the peptidase M16 family K06972 - - 5.124e-218 677.0
PJS1_k127_5526924_2 Protein of unknown function (DUF3450) - - - 0.000000000000000000000000000000000000000000000002967 184.0
PJS1_k127_5526924_3 COG0811 Biopolymer transport proteins K03561 - - 0.0000000000000000000000000000000000000004763 154.0
PJS1_k127_5526924_4 Biopolymer K03559 - - 0.000000000000000000000000009655 109.0
PJS1_k127_5546404_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 4.487e-217 675.0
PJS1_k127_5546404_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 581.0
PJS1_k127_5546404_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008955 486.0
PJS1_k127_5546404_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001203 252.0
PJS1_k127_5546404_4 COG0607 Rhodanese-related sulfurtransferase K03972 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005623,GO:0016740,GO:0016782,GO:0016783,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000003114 232.0
PJS1_k127_5546404_5 Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation K00322 - 1.6.1.1 0.00000000000000000000000000000000000000000000000000000000000002248 214.0
PJS1_k127_5546404_6 High frequency lysogenization protein HflD homolog K07153 - - 0.0000000000000000000000000000000000000000000000000006712 183.0
PJS1_k127_5635190_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 2.29e-218 678.0
PJS1_k127_5635190_1 Tol-Pal system TolA K03646 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 466.0
PJS1_k127_5635190_2 MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 445.0
PJS1_k127_5635190_3 Biopolymer transport protein K03560 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 281.0
PJS1_k127_5635190_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000002457 117.0
PJS1_k127_5635190_5 Thioesterase K01075,K07107 GO:0003674,GO:0003824,GO:0016787,GO:0016788,GO:0016790 3.1.2.23 0.0000000000000000000000000002122 121.0
PJS1_k127_5662134_0 Bacterial protein of unknown function (DUF885) - - - 1.393e-241 750.0
PJS1_k127_5662134_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 1.894e-237 735.0
PJS1_k127_5662134_2 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 1.464e-207 645.0
PJS1_k127_5662134_3 esterase of the alpha-beta hydrolase superfamily K07001 - - 2.728e-201 627.0
PJS1_k127_5662134_4 Domain of unknown function (DUF4892) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 519.0
PJS1_k127_5662134_5 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.000000000000000000000000000000000000000000000000000000002444 201.0
PJS1_k127_5671437_0 COG2230 Cyclopropane fatty acid synthase and related methyltransferases K00574 - 2.1.1.79 1.145e-274 845.0
PJS1_k127_5671437_1 Protein of unknown function (DUF1365) K09701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 596.0
PJS1_k127_5671437_3 NAD FAD-binding protein K06954 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007305 322.0
PJS1_k127_5687207_0 7TMR-DISM extracellular 2 K20972 - - 0.0 1440.0
PJS1_k127_5687207_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0 1026.0
PJS1_k127_5687207_2 COG0464 ATPases of the AAA class - - - 3.987e-313 960.0
PJS1_k127_5687207_3 Belongs to the GARS family K01945 - 6.3.4.13 1.275e-275 848.0
PJS1_k127_5687207_4 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003878 431.0
PJS1_k127_5687207_5 acetolactate synthase K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006277 314.0
PJS1_k127_5687207_6 acetolactate synthase K01652 - 2.2.1.6 0.000000000000000000000000000000000000000008544 153.0
PJS1_k127_569356_0 Belongs to the DEAD box helicase family K05591 - 3.6.4.13 1.818e-292 899.0
PJS1_k127_569356_1 Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA) K00557 - 2.1.1.35 3.68e-242 750.0
PJS1_k127_569356_2 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 3.449e-219 683.0
PJS1_k127_569356_3 Acyl-CoA thioesterase K10805 - - 7.634e-194 605.0
PJS1_k127_569356_4 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 601.0
PJS1_k127_569356_5 Thioesterase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 351.0
PJS1_k127_569356_6 phenylacetate-CoA ligase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007326 319.0
PJS1_k127_5710926_0 ABC transporter K18893 - - 0.0 1159.0
PJS1_k127_5710926_1 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 3.043e-261 805.0
PJS1_k127_5710926_2 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008122 563.0
PJS1_k127_5710926_3 Bacterial extracellular solute-binding proteins, family 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 366.0
PJS1_k127_5710926_4 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000003631 225.0
PJS1_k127_5729961_0 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 424.0
PJS1_k127_5729961_1 ADP-ribose pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 374.0
PJS1_k127_5729961_2 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009005 357.0
PJS1_k127_5729961_3 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 350.0
PJS1_k127_5729961_5 Protein of unknown function (DUF3135) - - - 0.000000000000000000000000000000000000000000000000000000000000009142 216.0
PJS1_k127_5729961_6 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000003658 214.0
PJS1_k127_5729961_7 Fe-S-cluster oxidoreductase K06940 - - 0.000000000000000000000000000000000009033 137.0
PJS1_k127_5729961_8 Fe-S protein K06938 - - 0.0000000000000000000000000000000000265 134.0
PJS1_k127_5733852_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.0 1079.0
PJS1_k127_5733852_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 4.469e-252 780.0
PJS1_k127_5733852_2 diguanylate cyclase activity K18967,K20971 - 2.7.7.65 1.14e-205 641.0
PJS1_k127_5733852_3 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 318.0
PJS1_k127_5733852_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001109 239.0
PJS1_k127_5733852_5 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000001465 160.0
PJS1_k127_5733852_6 COG3315 O-Methyltransferase involved in polyketide biosynthesis - - - 0.000000000000000000000000000001216 120.0
PJS1_k127_5739140_0 Protein involved in outer membrane biogenesis - - - 8.757e-277 859.0
PJS1_k127_5739140_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005787 269.0
PJS1_k127_5739140_2 - - - - 0.0000000000000000000000000000000000000000000000000000002417 199.0
PJS1_k127_582179_0 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 4.633e-292 900.0
PJS1_k127_582179_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 518.0
PJS1_k127_582179_2 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000019 275.0
PJS1_k127_5824419_0 - - - - 3.221e-264 814.0
PJS1_k127_5824419_1 Outer membrane efflux protein - - - 3.222e-234 732.0
PJS1_k127_5824419_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007734 250.0
PJS1_k127_5824419_3 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000001238 188.0
PJS1_k127_582624_0 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 347.0
PJS1_k127_582624_1 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000003636 237.0
PJS1_k127_5837201_0 Belongs to the glutamate synthase family - - - 0.0 1010.0
PJS1_k127_5837201_1 Belongs to the UPF0061 (SELO) family - - - 4.223e-316 970.0
PJS1_k127_5837201_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 348.0
PJS1_k127_5837201_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001283 282.0
PJS1_k127_5848657_0 Domain of Unknown Function (DUF748) - - - 0.0 1627.0
PJS1_k127_5848657_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 3.051e-230 713.0
PJS1_k127_5869916_0 acyl-CoA dehydrogenase - - - 6.341e-270 831.0
PJS1_k127_5869916_1 nucleoside-diphosphate sugar epimerase K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 569.0
PJS1_k127_5869916_3 Belongs to the glutamate synthase family - - - 0.000000009175 56.0
PJS1_k127_589148_0 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 5.523e-236 730.0
PJS1_k127_589148_1 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009022 524.0
PJS1_k127_589148_2 (ABC) transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 499.0
PJS1_k127_589148_3 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 490.0
PJS1_k127_5908562_0 Belongs to the UPF0176 family K07146 - - 4.982e-220 683.0
PJS1_k127_5908562_1 Part of a membrane complex involved in electron transport K03613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004523 446.0
PJS1_k127_5908562_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000737 435.0
PJS1_k127_5908562_3 Part of a membrane complex involved in electron transport K03612 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 326.0
PJS1_k127_5908562_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000002226 76.0
PJS1_k127_5910107_0 chitin binding K21712 - - 0.0 1187.0
PJS1_k127_5910107_1 COG2303 Choline dehydrogenase and related flavoproteins K03333 - 1.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 311.0
PJS1_k127_5928732_0 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.0 1028.0
PJS1_k127_5928732_1 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11900 - - 1.619e-311 956.0
PJS1_k127_5928732_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 1.06e-287 883.0
PJS1_k127_5928732_3 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 1.116e-255 788.0
PJS1_k127_5928732_4 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 9.747e-248 766.0
PJS1_k127_5928732_5 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 575.0
PJS1_k127_5928732_6 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 570.0
PJS1_k127_5928732_7 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 363.0
PJS1_k127_5928732_8 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008241 305.0
PJS1_k127_5928732_9 protein conserved in bacteria K09937 - - 0.0000000000000000000000000000000007238 131.0
PJS1_k127_595572_0 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 579.0
PJS1_k127_595572_1 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 567.0
PJS1_k127_595572_2 DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 501.0
PJS1_k127_5961833_0 amine dehydrogenase activity - - - 1.393e-232 738.0
PJS1_k127_5961833_1 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 447.0
PJS1_k127_5961833_2 protein conserved in bacteria K09912 - - 0.000000000000000000000000000000000000000007241 153.0
PJS1_k127_6050943_0 of the RND superfamily K07003 - - 0.0 1588.0
PJS1_k127_6050943_1 Photosynthesis system II assembly factor YCF48 - - - 1.701e-251 778.0
PJS1_k127_6050943_3 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000005226 60.0
PJS1_k127_6051622_0 Putative zinc-binding metallo-peptidase - - - 1.498e-243 752.0
PJS1_k127_6051622_1 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 453.0
PJS1_k127_6056654_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.0 1112.0
PJS1_k127_6056654_1 Na H antiporter NhaD and related arsenite - - - 1.563e-225 702.0
PJS1_k127_6056654_2 ATPase components of ABC transporters with duplicated ATPase domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 577.0
PJS1_k127_6056654_3 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007273 414.0
PJS1_k127_6056654_4 Type IV pili methyl-accepting chemotaxis transducer N-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 317.0
PJS1_k127_6058411_0 Serine threonine protein kinase K08282,K11916,K12132 - 2.7.11.1 6.235e-272 837.0
PJS1_k127_6058411_1 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008066 582.0
PJS1_k127_6058411_2 NfeD-like C-terminal, partner-binding K07340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002368 278.0
PJS1_k127_6058411_3 Zn-dependent metallo-hydrolase RNA specificity domain K12574 - - 0.0000000000000000000000000000009895 120.0
PJS1_k127_6080249_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 2.807e-236 731.0
PJS1_k127_6080249_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 4.615e-229 711.0
PJS1_k127_6080249_2 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 555.0
PJS1_k127_6080249_3 Riboflavin synthase K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 402.0
PJS1_k127_6080249_4 Metal-dependent hydrolase K07044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 391.0
PJS1_k127_6080249_5 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 307.0
PJS1_k127_6080249_6 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 304.0
PJS1_k127_6080249_7 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 301.0
PJS1_k127_6080249_8 cellular response to heat K09807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001098 243.0
PJS1_k127_6080249_9 deoxycytidine triphosphate deaminase K09948 - - 0.00000000000000000000000000000000000000000000000000002448 189.0
PJS1_k127_6106374_0 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 0.0 1615.0
PJS1_k127_6106374_1 synthase K06175 - 5.4.99.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 531.0
PJS1_k127_6106374_2 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008187 506.0
PJS1_k127_6106374_3 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 406.0
PJS1_k127_6113829_0 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates K01637 - 4.1.3.1 0.0 1063.0
PJS1_k127_6113829_1 Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 - - - 2.436e-233 723.0
PJS1_k127_6113829_2 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009839 454.0
PJS1_k127_6113829_3 fatty acid desaturase - - - 0.0000000000000000000000000000000000000000001491 159.0
PJS1_k127_6157822_0 TonB dependent receptor - - - 0.0 1389.0
PJS1_k127_6157822_1 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000268 231.0
PJS1_k127_6157822_2 COG2124 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000006406 184.0
PJS1_k127_6157822_3 - - - - 0.00000000000000000000000000000000001372 139.0
PJS1_k127_6157822_4 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000138 115.0
PJS1_k127_6158466_0 Involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain K03578 - 3.6.4.13 0.0 1814.0
PJS1_k127_6158466_1 involved in the beta-oxidation of n-alkanoic and n-phenylalkanoic acids K01897 - 6.2.1.3 0.0 1133.0
PJS1_k127_6158961_0 COG2366 Protein related to penicillin acylase K01434,K07116 - 3.5.1.11,3.5.1.97 5.243e-221 713.0
PJS1_k127_6158961_1 COG2207 AraC-type DNA-binding domain-containing proteins - - - 2.07e-216 673.0
PJS1_k127_6158961_2 reductase K13938 - 1.5.1.3,1.5.1.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 344.0
PJS1_k127_6158961_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 328.0
PJS1_k127_6158961_4 methyltransferase - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010565,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031974,GO:0031998,GO:0031999,GO:0032259,GO:0036211,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043467,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045833,GO:0045922,GO:0046320,GO:0046322,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050994,GO:0050995,GO:0051341,GO:0051354,GO:0062012,GO:0062014,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1904732,GO:1904733,GO:1904735,GO:1904736 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 305.0
PJS1_k127_6158961_5 - - - - 0.000000000009521 66.0
PJS1_k127_6158961_6 - - - - 0.0000000002008 61.0
PJS1_k127_6158961_7 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000005234 54.0
PJS1_k127_616423_0 argininosuccinate lyase K01755 - 4.3.2.1 8.922e-301 925.0
PJS1_k127_616423_1 signal transduction protein with a C-terminal ATPase domain K08082 - 2.7.13.3 2.013e-218 681.0
PJS1_k127_616423_2 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008127 599.0
PJS1_k127_616423_3 Circularly permuted ATP-grasp type 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 595.0
PJS1_k127_616423_4 Response regulator of the LytR AlgR family K02477,K08083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 464.0
PJS1_k127_616423_5 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000001202 112.0
PJS1_k127_616423_6 Protein of unknown function (DUF3575) - - - 0.00000001439 64.0
PJS1_k127_6172717_0 Cobyrinic acid a,c-diamide synthase K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 609.0
PJS1_k127_6172717_1 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000001253 197.0
PJS1_k127_6172717_2 protein conserved in bacteria K11904 - - 0.00000008158 60.0
PJS1_k127_6174781_0 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006236 344.0
PJS1_k127_6174781_1 HupE / UreJ protein K03192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007012 340.0
PJS1_k127_6174781_2 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000004298 147.0
PJS1_k127_6176490_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008718 588.0
PJS1_k127_6176490_1 fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 397.0
PJS1_k127_6176490_2 COG2030 Acyl dehydratase - - - 0.00000000000000000000000000000000006494 134.0
PJS1_k127_6180050_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 4.939e-266 822.0
PJS1_k127_6180050_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 5.714e-263 813.0
PJS1_k127_6180050_2 Peptidoglycan polymerase that is essential for cell division K03588 - - 5.048e-244 755.0
PJS1_k127_6180050_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 1.136e-231 717.0
PJS1_k127_6180050_4 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 582.0
PJS1_k127_6180050_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0050511,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 377.0
PJS1_k127_6180050_6 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000005389 272.0
PJS1_k127_6188353_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1384.0
PJS1_k127_6188353_1 endoribonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002591 250.0
PJS1_k127_6188353_2 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000000000006062 121.0
PJS1_k127_6195672_0 TonB-dependent Receptor Plug Domain - - - 2.397e-206 666.0
PJS1_k127_6195672_1 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 493.0
PJS1_k127_6195672_2 Spirocyclase AveC-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 330.0
PJS1_k127_6195672_3 - - - - 0.00000000000000000000000000000000000005893 153.0
PJS1_k127_6201294_0 Belongs to the ompA family K03286 - - 7.728e-227 706.0
PJS1_k127_6201294_1 Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA K00674 - 2.3.1.117 1.537e-214 667.0
PJS1_k127_6201294_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003397 423.0
PJS1_k127_6201294_3 helical bimodular (HBM) domain K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 372.0
PJS1_k127_6201294_4 Lactoylglutathione lyase K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002257 271.0
PJS1_k127_6201294_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001598 248.0
PJS1_k127_6201294_6 Belongs to the ArsC family K00537 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000001682 224.0
PJS1_k127_6227120_0 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 542.0
PJS1_k127_6227120_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008082 488.0
PJS1_k127_6227120_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 467.0
PJS1_k127_6227120_3 stress-induced protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 400.0
PJS1_k127_6227120_4 stress-induced protein - - - 0.00000000000000000000000000000000000002191 143.0
PJS1_k127_6227120_5 Pfam Transposase IS66 - - - 0.000000000000000000000000000000000003758 138.0
PJS1_k127_6227120_6 Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.00000008585 54.0
PJS1_k127_6230559_0 Belongs to the peptidase S16 family - - - 0.0 1401.0
PJS1_k127_6230559_1 Histidine kinase K10715 - 2.7.13.3 0.0 1034.0
PJS1_k127_6230559_2 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 576.0
PJS1_k127_6230559_3 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004502 390.0
PJS1_k127_6230559_4 Chalcone isomerase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 352.0
PJS1_k127_6230559_6 Thioesterase K12500 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0047617,GO:0055114,GO:0071704,GO:0072329,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001162 255.0
PJS1_k127_6230559_8 5'-3' exonuclease K01146 - - 0.000000000000000000000008516 100.0
PJS1_k127_6244160_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 1.094e-276 852.0
PJS1_k127_6244160_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 1.415e-256 791.0
PJS1_k127_6244160_2 diguanylate cyclase - - - 9.757e-194 605.0
PJS1_k127_6244160_3 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 588.0
PJS1_k127_6244160_4 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003544 576.0
PJS1_k127_6244160_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 507.0
PJS1_k127_6244160_6 reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006666 478.0
PJS1_k127_6244160_7 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 473.0
PJS1_k127_6244160_8 haloacid dehalogenase-like hydrolase K22292 - 3.1.3.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008619 434.0
PJS1_k127_6244160_9 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007211 260.0
PJS1_k127_6271930_0 type II secretion system protein K02454 - - 0.0 1167.0
PJS1_k127_6271930_1 Adenylate cyclase K18446 - 3.6.1.25 1.494e-202 631.0
PJS1_k127_6271930_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease - - - 0.000000000000000000000000000001517 122.0
PJS1_k127_6280133_0 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 - 3.6.4.13 5.147e-279 861.0
PJS1_k127_6280133_1 Protein of unknown function (DUF3592) - - - 5.552e-250 775.0
PJS1_k127_6280133_2 Sodium/hydrogen exchanger family - - - 1.486e-219 685.0
PJS1_k127_6280133_3 TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 521.0
PJS1_k127_6280133_4 Protein of unknown function (DUF1275) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008742 404.0
PJS1_k127_6280133_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000009966 210.0
PJS1_k127_6280133_7 DNA-binding protein VF530 - - - 0.00000000000000000000000000000029 123.0
PJS1_k127_6289354_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1362.0
PJS1_k127_6289354_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 1.469e-216 674.0
PJS1_k127_6289354_2 Transcriptional regulator - - - 2.611e-212 663.0
PJS1_k127_6289354_3 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002797 278.0
PJS1_k127_6289354_4 COG1252 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001942 261.0
PJS1_k127_6289354_5 Modulates RecA activity K03565 GO:0003674,GO:0005488,GO:0005515,GO:0006282,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0019219,GO:0019222,GO:0019899,GO:0030234,GO:0031323,GO:0031668,GO:0033554,GO:0043086,GO:0044092,GO:0048583,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0071496,GO:0080090,GO:0080134,GO:0080135,GO:0098772,GO:2001020 - 0.0000000000000000000000000000006127 127.0
PJS1_k127_630709_0 K( ) H( ) antiporter that extrudes potassium in exchange for external protons and maintains the internal concentration of potassium under toxic levels K11105 GO:0003674,GO:0005215,GO:0005451,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006884,GO:0008150,GO:0008324,GO:0008361,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015386,GO:0015491,GO:0015672,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022804,GO:0022821,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071840,GO:0071944,GO:0090066,GO:0098655,GO:0098660,GO:0098662,GO:0099516,GO:1902600 - 1.079e-242 760.0
PJS1_k127_6317158_0 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 455.0
PJS1_k127_6317158_1 Alcohol dehydrogenase GroES-like domain K13979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005909 439.0
PJS1_k127_6317158_2 Forkhead associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 413.0
PJS1_k127_6317158_3 COG0642 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000001357 190.0
PJS1_k127_6317623_0 TonB dependent receptor K02014 - - 7.717e-283 871.0
PJS1_k127_6317623_1 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 301.0
PJS1_k127_6317623_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000001286 218.0
PJS1_k127_6317623_4 Cysteine-rich CPXCG - - - 0.000000000000000000000000000000000001318 139.0
PJS1_k127_6317623_5 FecR protein K07165 - - 0.0000000000000000000000000000000003237 132.0
PJS1_k127_6319445_0 Taurine catabolism dioxygenase TauD, TfdA family - - - 7.532e-201 628.0
PJS1_k127_6319445_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 562.0
PJS1_k127_6319445_2 PFAM Asparaginase glutaminase K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006244 515.0
PJS1_k127_6319445_3 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 435.0
PJS1_k127_6319445_5 the cytoplasmic domain of flagellar protein K04061 - - 0.000000000000000000000000000000000000000000000000001149 183.0
PJS1_k127_6337376_0 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1435.0
PJS1_k127_6337376_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 9.237e-246 758.0
PJS1_k127_6337376_2 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008887 384.0
PJS1_k127_6337376_3 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007469 277.0
PJS1_k127_6337376_4 Cold-shock' K03704 - - 0.0000000000000000000000000000000000000000001994 160.0
PJS1_k127_6337376_5 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000002367 117.0
PJS1_k127_6337376_6 High frequency lysogenization protein HflD homolog K07153 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009898,GO:0016020,GO:0019897,GO:0019898,GO:0031234,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0071944,GO:0098552,GO:0098562 - 0.000000000000000138 82.0
PJS1_k127_6362700_0 - - - - 2.779e-268 826.0
PJS1_k127_6362700_1 Cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 528.0
PJS1_k127_6362700_2 membrane protein involved in D-alanine export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007574 330.0
PJS1_k127_6366123_0 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 3.119e-270 835.0
PJS1_k127_6366123_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 1.169e-245 764.0
PJS1_k127_6366123_2 Phosphate ABC transporter substrate-binding protein K02040 - - 1.415e-216 674.0
PJS1_k127_6366123_3 hydrolase K10806 - - 0.0000000000000000000000000000000000000000000000000008973 184.0
PJS1_k127_6366123_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000009828 178.0
PJS1_k127_6369172_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 1.267e-226 703.0
PJS1_k127_6369172_1 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005897 473.0
PJS1_k127_6369172_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 460.0
PJS1_k127_6369172_3 protein conserved in bacteria K09938 - - 0.00000000000000000000000000000000000000000000000005731 179.0
PJS1_k127_6369172_4 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000009308 171.0
PJS1_k127_6380225_0 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K01488,K21053 - 3.5.4.2,3.5.4.4 1.205e-228 708.0
PJS1_k127_6380225_1 ABC transporter substrate-binding protein PnrA-like K02058 - - 2.859e-224 697.0
PJS1_k127_6380225_2 fatty acid desaturase - - - 2.773e-223 692.0
PJS1_k127_6380225_3 enoyl-CoA hydratase - - - 0.00000000000000000000000000000001496 126.0
PJS1_k127_6385331_0 COG1960 Acyl-CoA dehydrogenases K00248 - 1.3.8.1 0.0 1184.0
PJS1_k127_6385331_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 5.314e-308 944.0
PJS1_k127_6385331_2 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 1.833e-211 657.0
PJS1_k127_6385331_3 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 545.0
PJS1_k127_6385331_4 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 515.0
PJS1_k127_6385331_5 import inner membrane translocase subunit Tim44 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 487.0
PJS1_k127_6385331_6 PAP2 superfamily K12978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 456.0
PJS1_k127_6389664_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2693.0
PJS1_k127_6389664_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 601.0
PJS1_k127_6389664_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 445.0
PJS1_k127_6389664_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007641 367.0
PJS1_k127_6389664_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 308.0
PJS1_k127_6389664_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 281.0
PJS1_k127_6389664_6 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000000000000000000000000000000000000000000000000000000001119 222.0
PJS1_k127_6389664_7 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000000000000000000000005045 218.0
PJS1_k127_6389664_8 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000001339 79.0
PJS1_k127_6391408_0 transport system, large permease component - - - 0.0 1355.0
PJS1_k127_6391408_1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006869 594.0
PJS1_k127_6391408_2 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000003709 208.0
PJS1_k127_6397481_0 Catalyzes the formation of oxaloacetate from pyruvate K01960 - 6.4.1.1 0.0 1171.0
PJS1_k127_6397481_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 593.0
PJS1_k127_6397481_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 458.0
PJS1_k127_6397481_3 Catalyzes the ATP-dependent carboxylation of a covalently attached biotin and the transfer of the carboxyl group to pyruvate forming oxaloacetate K01959 - 6.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005836 432.0
PJS1_k127_6397481_4 Cytosol aminopeptidase family, catalytic domain K01255 - 3.4.11.1 0.000000000000000000000000000000000000000003476 154.0
PJS1_k127_6397805_0 Histidine kinase - - - 1.708e-220 692.0
PJS1_k127_6397805_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 299.0
PJS1_k127_6397805_2 COG0616 Periplasmic serine proteases (ClpP class) K04774 GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0016020,GO:0019538,GO:0043170,GO:0044238,GO:0044464,GO:0071704,GO:0071944,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000004768 198.0
PJS1_k127_6399997_0 cytochrome d ubiquinol oxidase, subunit K00426 - 1.10.3.14 5.59e-246 760.0
PJS1_k127_6399997_1 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 558.0
PJS1_k127_6399997_10 redox protein, regulator of disulfide bond formation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 288.0
PJS1_k127_6399997_11 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004414 238.0
PJS1_k127_6399997_12 Cyd operon protein YbgE (Cyd_oper_YbgE) - - - 0.000000000000000000000000000000000000000000000000000000000008433 208.0
PJS1_k127_6399997_13 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000000000000000000000000000000000000000000000000001941 196.0
PJS1_k127_6399997_14 PFAM membrane bound YbgT family protein K00424 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0019867,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0071944 1.10.3.14 0.0000000000006153 68.0
PJS1_k127_6399997_2 MATE efflux family protein K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 496.0
PJS1_k127_6399997_3 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008967 443.0
PJS1_k127_6399997_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 400.0
PJS1_k127_6399997_5 oxidase, subunit K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005066 398.0
PJS1_k127_6399997_6 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 372.0
PJS1_k127_6399997_7 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 355.0
PJS1_k127_6399997_8 Cytochrome b561 K12262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 338.0
PJS1_k127_6399997_9 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009426 324.0
PJS1_k127_640738_0 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 589.0
PJS1_k127_640738_1 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 361.0
PJS1_k127_646069_0 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.0 1489.0
PJS1_k127_646069_1 Binding-protein-dependent transport system inner membrane component K02034 - - 9.952e-213 663.0
PJS1_k127_646069_2 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 1.549e-199 623.0
PJS1_k127_646069_3 cation transport ATPase - - - 0.000000000000000000000000000000000000000000000000000001642 195.0
PJS1_k127_668684_0 MacB-like periplasmic core domain K02004 - - 6.505e-234 726.0
PJS1_k127_668684_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 5.01e-220 685.0
PJS1_k127_668684_2 ATPases associated with a variety of cellular activities K02003,K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002159 259.0
PJS1_k127_668684_3 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000002868 164.0
PJS1_k127_691610_0 ATP-dependent helicase HrpB K03579 - 3.6.4.13 0.0 1603.0
PJS1_k127_691610_1 AAA domain - - - 7.582e-319 977.0
PJS1_k127_691610_2 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 464.0
PJS1_k127_691610_3 - - - - 0.00000000000000000000000000000000005174 134.0
PJS1_k127_691610_4 - - - - 0.0000000000000000000000000006158 113.0
PJS1_k127_727651_0 ABC transporter ATP-binding protein K06158 - - 0.0 1161.0
PJS1_k127_756149_0 WYL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 338.0
PJS1_k127_756149_1 Transposase DDE domain - - - 0.00000000000000000000000000000000000000000000000000000000000003511 220.0
PJS1_k127_756149_2 - - - - 0.0000000000000000000000000000000000000000000000004328 176.0
PJS1_k127_756149_3 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000004885 157.0
PJS1_k127_756149_4 - - - - 0.0000000000000000000000001303 107.0
PJS1_k127_756149_6 COG3666 Transposase and inactivated derivatives - - - 0.000000000000000009361 87.0
PJS1_k127_756149_7 - - - - 0.0000000002637 63.0
PJS1_k127_769136_0 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0 1106.0
PJS1_k127_769136_1 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 602.0
PJS1_k127_769136_2 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 596.0
PJS1_k127_769136_3 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 287.0
PJS1_k127_769136_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000000000000000000000000000000000000000000000333 203.0
PJS1_k127_784024_0 Protein of unknown function (DUF1722) - - - 5.45e-211 658.0
PJS1_k127_784024_1 Flavin containing amine oxidoreductase K06955 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 562.0
PJS1_k127_784024_2 cobalamin (vitamin B12) biosynthesis CbiX K03795 - 4.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000001185 248.0
PJS1_k127_784024_3 Transcriptional K22491 - - 0.0000000000000000000000000000000000000000000000001135 177.0
PJS1_k127_788577_0 Alpha amylase, catalytic domain K00690 - 2.4.1.7 0.0 1139.0
PJS1_k127_788577_1 Belongs to the IlvD Edd family K01690 - 4.2.1.12 5.451e-288 884.0
PJS1_k127_788577_2 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 413.0
PJS1_k127_788577_3 Catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate K01625 - 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 409.0
PJS1_k127_793748_0 FOG TPR repeat - - - 0.0 1294.0
PJS1_k127_796920_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1200.0
PJS1_k127_796920_1 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 534.0
PJS1_k127_796920_2 Belongs to the bacterial histone-like protein family - - - 0.00000000000000000000000000000000000000000557 156.0
PJS1_k127_800995_0 Domain of unknown function (DUF4915) - - - 1.383e-266 820.0
PJS1_k127_800995_1 Subtilase family - - - 7.249e-254 786.0
PJS1_k127_800995_2 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 427.0
PJS1_k127_800995_3 Microcystin-dependent protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 353.0
PJS1_k127_800995_4 phage Tail Collar - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006758 344.0
PJS1_k127_800995_5 Tail Collar - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 330.0
PJS1_k127_800995_6 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 310.0
PJS1_k127_800995_7 - - - - 0.000000000000000000000000000000000000000004846 156.0
PJS1_k127_80962_0 N-methylhydantoinase A acetone carboxylase, beta subunit K01469,K01473 - 3.5.2.14,3.5.2.9 0.0 2213.0
PJS1_k127_80962_1 Diguanylate cyclase - - - 7.429e-250 771.0
PJS1_k127_80962_2 COG2863 Cytochrome c553 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009411 450.0
PJS1_k127_80962_3 Short C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 326.0
PJS1_k127_80962_4 protein conserved in bacteria K09796 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003346 244.0
PJS1_k127_821149_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 1.725e-262 809.0
PJS1_k127_821149_1 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006612 407.0
PJS1_k127_821149_2 Forms part of the polypeptide exit tunnel K02926 GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008428,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030234,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032069,GO:0032074,GO:0032268,GO:0032269,GO:0032991,GO:0032993,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0065003,GO:0065007,GO:0065009,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:0098772,GO:0140110,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 378.0
PJS1_k127_821149_3 Involved in the binding of tRNA to the ribosomes K02946 GO:0001072,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0015935,GO:0019219,GO:0019222,GO:0019538,GO:0022626,GO:0022627,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0140110,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000006072 203.0
PJS1_k127_821149_4 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000002585 171.0
PJS1_k127_840928_0 Cysteine desulfurase activator complex subunit SufB K09014 - - 1.876e-316 969.0
PJS1_k127_840928_1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component K09015 - - 1.944e-269 831.0
PJS1_k127_840928_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 8.012e-236 730.0
PJS1_k127_840928_3 ABC-type transport system involved in Fe-S cluster assembly, ATPase component K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 504.0
PJS1_k127_840928_4 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006035 300.0
PJS1_k127_840928_5 UBA THIF-type NAD FAD binding K22132 - - 0.00000000000000000000000000000000000000000002218 163.0
PJS1_k127_840928_6 Uncharacterized conserved protein (DUF2164) - - - 0.0000000000000000000000000000000000000000005834 157.0
PJS1_k127_882283_0 protein conserved in bacteria K09919 - - 9.874e-239 739.0
PJS1_k127_882283_1 FR47-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009285 464.0
PJS1_k127_882283_2 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008817 297.0
PJS1_k127_88588_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 2.597e-247 766.0
PJS1_k127_88588_1 cytochrome c5 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 318.0
PJS1_k127_88588_2 - - - - 0.00000000000000000000000000000000000000000000000003632 179.0
PJS1_k127_88588_3 hydrolase K20862 - 3.1.3.102,3.1.3.104 0.0000000000000000000000000000000000003259 140.0
PJS1_k127_892097_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 2.866e-242 749.0
PJS1_k127_892097_1 catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis K01624 - 4.1.2.13 6.985e-230 711.0
PJS1_k127_892097_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134,K03472 - 1.2.1.12,1.2.1.72 6.814e-216 670.0
PJS1_k127_892097_3 Methyltransferase domain - - - 0.000000000000000000000000054 108.0
PJS1_k127_905675_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1532.0
PJS1_k127_905675_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07639 - 2.7.13.3 2.96e-322 988.0
PJS1_k127_905675_2 transcriptional regulator K03576 - - 6.684e-200 623.0
PJS1_k127_905675_3 consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07661 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007225 490.0
PJS1_k127_905675_4 forms a homodimer and then a multimeric complex with NrdA K00526 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006444 347.0
PJS1_k127_905675_5 FOG PAS PAC domain K03776 - - 0.00000000000000003753 80.0
PJS1_k127_906137_0 ABC-type phosphate transport system, periplasmic component K02040 - - 3.334e-293 902.0
PJS1_k127_906137_1 START domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005306 396.0
PJS1_k127_906137_2 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity K14540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008998 395.0
PJS1_k127_906137_4 Belongs to the BolA IbaG family K05527 - - 0.00000000000000000000000000000000000000000000000000001309 189.0
PJS1_k127_906137_5 Belongs to the UPF0149 family K07039 - - 0.000000000000000000000000000000000000000000002609 164.0
PJS1_k127_909060_0 Plays a role in the regulation of phosphate uptake K02039 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004226 435.0
PJS1_k127_909060_1 transporter K12942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 374.0
PJS1_k127_909060_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015114,GO:0015318,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0035435,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:0099133 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005495 347.0
PJS1_k127_911830_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 0.0 2137.0
PJS1_k127_911830_1 Fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005481 397.0
PJS1_k127_911830_2 carbamoyl-phosphate synthetase glutamine chain K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 321.0
PJS1_k127_911830_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007903 297.0
PJS1_k127_950150_0 Rhs element Vgr protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 426.0
PJS1_k127_950150_1 T4-like virus tail tube protein gp19 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003101 251.0
PJS1_k127_950150_2 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000009749 206.0
PJS1_k127_950150_3 T4-like virus tail tube protein gp19 - - - 0.0000000000000000000000000000000000000000000000000003841 188.0
PJS1_k127_950150_4 PAAR motif - - - 0.0000000000000000000000000000000000000000001901 160.0
PJS1_k127_950150_5 Phage baseplate assembly protein W K06903 - - 0.0000000000000000000000000000000000000873 145.0
PJS1_k127_950150_6 homolog of phage Mu protein gp47 - - - 0.0000003356 53.0
PJS1_k127_969973_0 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 5.677e-299 918.0
PJS1_k127_969973_2 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000004306 151.0