Overview

ID MAG02993
Name PJS1_bin.8
Sample SMP0070
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family Gallionellaceae
Genus Gallionella
Species
Assembly information
Completeness (%) 92.18
Contamination (%) 2.28
GC content (%) 61.0
N50 (bp) 28,823
Genome size (bp) 2,078,389

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1993

Gene name Description KEGG GOs EC E-value Score Sequence
PJS1_k127_1021261_0 Membrane-bound serine protease (ClpP class) K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 527.0
PJS1_k127_1021261_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 501.0
PJS1_k127_1021261_2 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 390.0
PJS1_k127_1021261_3 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000000000000000004945 141.0
PJS1_k127_1021261_4 PFAM aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000001546 85.0
PJS1_k127_1027976_0 PFAM DEAD DEAH box helicase domain protein - - - 2.567e-212 668.0
PJS1_k127_1027976_1 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 548.0
PJS1_k127_1027976_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.00000000000000003753 80.0
PJS1_k127_1038823_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2537.0
PJS1_k127_1038823_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2466.0
PJS1_k127_1038823_10 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000000000000000000000000000000000000004056 168.0
PJS1_k127_1038823_11 elongation factor Tu K02358 - - 0.00000000000000000000000000000000009408 132.0
PJS1_k127_1038823_12 elongation factor Tu K02358 - - 0.000000000000000001486 85.0
PJS1_k127_1038823_13 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000001963 51.0
PJS1_k127_1038823_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1355.0
PJS1_k127_1038823_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 399.0
PJS1_k127_1038823_4 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 325.0
PJS1_k127_1038823_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006958 300.0
PJS1_k127_1038823_6 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004077 276.0
PJS1_k127_1038823_7 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006756 264.0
PJS1_k127_1038823_8 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000000001139 237.0
PJS1_k127_1038823_9 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000000000000000000904 203.0
PJS1_k127_1065780_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1099.0
PJS1_k127_1065780_1 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 2.161e-230 731.0
PJS1_k127_1065780_2 Pfam:Pyridox_oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001196 252.0
PJS1_k127_1065780_3 PFAM Protein-tyrosine phosphatase, low molecular weight K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000000006444 231.0
PJS1_k127_1065780_4 - - - - 0.000000000000000004096 89.0
PJS1_k127_1072528_0 PFAM AICARFT IMPCHase bienzyme formylation region K00602 - 2.1.2.3,3.5.4.10 1.037e-309 952.0
PJS1_k127_1072528_1 PFAM Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01945 - 6.3.4.13 1.132e-258 800.0
PJS1_k127_1072528_10 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004796 288.0
PJS1_k127_1072528_11 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003425 280.0
PJS1_k127_1072528_12 ApaG domain K06195 - - 0.0000000000000000000000000000000000000000000000000000000003799 207.0
PJS1_k127_1072528_13 TIGRFAM flagellar hook-basal body complex subunit FliE K02408 - - 0.000000000000000000000000000000000001086 141.0
PJS1_k127_1072528_14 Bacterial regulatory protein, Fis family K03557 - - 0.000000000000000000000000000008856 124.0
PJS1_k127_1072528_2 The M ring may be actively involved in energy transduction K02409 - - 2.026e-211 668.0
PJS1_k127_1072528_3 MltA specific insert domain K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 603.0
PJS1_k127_1072528_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 564.0
PJS1_k127_1072528_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 554.0
PJS1_k127_1072528_6 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009418 474.0
PJS1_k127_1072528_7 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007287 346.0
PJS1_k127_1072528_8 Alginate export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 334.0
PJS1_k127_1072528_9 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003683 317.0
PJS1_k127_1167292_0 PFAM aminotransferase class I and II K00812 - 2.6.1.1 1.286e-234 728.0
PJS1_k127_1167292_1 Membrane - - - 3.32e-231 754.0
PJS1_k127_1167292_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 297.0
PJS1_k127_1167292_3 - - - - 0.0000000000000000000000000000000000000000000000002452 183.0
PJS1_k127_1167292_4 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000003005 190.0
PJS1_k127_1167292_5 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000000000005136 159.0
PJS1_k127_1167292_6 Putative addiction module component - - - 0.000000000000000000000000000000000000009884 145.0
PJS1_k127_1167292_7 Plasmid stabilization system - - - 0.000000000000000000000000000000005964 129.0
PJS1_k127_1167292_8 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000005448 80.0
PJS1_k127_1176165_0 PFAM polysaccharide biosynthesis protein CapD - - - 2.012e-311 963.0
PJS1_k127_1176165_1 PFAM membrane bound O-acyl transferase MBOAT family protein K19294 - - 7.216e-276 853.0
PJS1_k127_1176165_10 PFAM Glycosyl transferase, family 4, conserved region K13007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 448.0
PJS1_k127_1176165_11 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005101 406.0
PJS1_k127_1176165_12 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000082 361.0
PJS1_k127_1176165_13 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 313.0
PJS1_k127_1176165_14 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000002289 233.0
PJS1_k127_1176165_15 Glycosyltransferase Family 4 K02844 - - 0.000000000000000000000000000000000000000000000000000000000000008175 243.0
PJS1_k127_1176165_16 methyltransferase - - - 0.00000003472 64.0
PJS1_k127_1176165_2 Domain of unknown function (DUF3391) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 584.0
PJS1_k127_1176165_3 PFAM glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 558.0
PJS1_k127_1176165_4 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 556.0
PJS1_k127_1176165_5 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 539.0
PJS1_k127_1176165_6 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 545.0
PJS1_k127_1176165_7 Glycosyltransferase Family 4 K02844 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 548.0
PJS1_k127_1176165_8 O-antigen ligase like membrane protein K02847 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 511.0
PJS1_k127_1176165_9 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 455.0
PJS1_k127_1182592_0 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.0 1176.0
PJS1_k127_1182592_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0 1040.0
PJS1_k127_1182592_2 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 1.604e-250 785.0
PJS1_k127_1182592_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 1.349e-241 752.0
PJS1_k127_1182592_4 AAA domain K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 394.0
PJS1_k127_1182592_5 TIGRFAM type I secretion outer membrane protein, TolC family K12340 - - 0.000000000000006096 74.0
PJS1_k127_1196375_0 Alpha amylase, C-terminal all-beta domain K00700 - 2.4.1.18 0.0 1286.0
PJS1_k127_1196375_1 Glycosyl hydrolase family 57 - - - 1.999e-287 891.0
PJS1_k127_1196375_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 6.357e-239 743.0
PJS1_k127_1196375_3 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 581.0
PJS1_k127_1196375_4 Phosphoglucose isomerase K01810 - 5.3.1.9 0.00000000000000000000000000000000000000000000000001295 183.0
PJS1_k127_1196375_5 - - - - 0.0000000000000009818 83.0
PJS1_k127_1196375_6 Bacteriophage replication gene A protein (GPA) - - - 0.0000000000188 70.0
PJS1_k127_1378982_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1545.0
PJS1_k127_1378982_1 Hsp70 protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 0.0 1128.0
PJS1_k127_1378982_10 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 1.54e-200 627.0
PJS1_k127_1378982_11 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 3.26e-197 618.0
PJS1_k127_1378982_12 PFAM Adenylyl cyclase class-3 4 guanylyl cyclase K01769 - 4.6.1.2 5.36e-197 621.0
PJS1_k127_1378982_13 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 7.987e-195 613.0
PJS1_k127_1378982_14 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007846 592.0
PJS1_k127_1378982_15 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 572.0
PJS1_k127_1378982_16 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 525.0
PJS1_k127_1378982_17 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 506.0
PJS1_k127_1378982_18 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009192 429.0
PJS1_k127_1378982_19 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 436.0
PJS1_k127_1378982_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 3.231e-281 869.0
PJS1_k127_1378982_20 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 432.0
PJS1_k127_1378982_21 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 405.0
PJS1_k127_1378982_22 PFAM type IV pilus assembly PilZ - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 359.0
PJS1_k127_1378982_23 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 291.0
PJS1_k127_1378982_24 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004682 280.0
PJS1_k127_1378982_25 Competence-damaged protein K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000002429 249.0
PJS1_k127_1378982_26 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates - - - 0.000000000000000000000000000000000000000000000000000000000003414 214.0
PJS1_k127_1378982_27 Colicin V production protein K03558 - - 0.0000000000000000000000000000000000000000000000000000000003306 209.0
PJS1_k127_1378982_28 RecX family K03565 - - 0.00000000000000000000000000000000000000000000000000000005604 199.0
PJS1_k127_1378982_29 transcription regulator containing HTH domain K18831 - - 0.000000000000000000000000000000000000000000000000006769 183.0
PJS1_k127_1378982_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 6.074e-263 814.0
PJS1_k127_1378982_30 protein conserved in bacteria K19166 - - 0.0000000000000000000000000000000000000000000006409 167.0
PJS1_k127_1378982_31 Uncharacterized ACR, COG1993 - - - 0.000000000000000000000000000000000000001045 150.0
PJS1_k127_1378982_32 Sporulation related domain K03749 - - 0.0000000000000000000000000000000000001003 149.0
PJS1_k127_1378982_33 Zinc-finger domain - - - 0.000000000000000000000000003112 111.0
PJS1_k127_1378982_34 phosphorelay signal transduction system - - - 0.0000000000000000000000002845 110.0
PJS1_k127_1378982_35 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000004407 80.0
PJS1_k127_1378982_36 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.0000000000005488 79.0
PJS1_k127_1378982_37 response to toxic substance K16347,K16348 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000002863 58.0
PJS1_k127_1378982_38 Putative diguanylate phosphodiesterase - - - 0.000000064 63.0
PJS1_k127_1378982_39 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000291 52.0
PJS1_k127_1378982_4 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835,K01840,K15778 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.2,5.4.2.8 1.535e-245 764.0
PJS1_k127_1378982_5 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 1.05e-221 691.0
PJS1_k127_1378982_6 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 1.562e-219 685.0
PJS1_k127_1378982_7 PFAM Mur ligase middle domain protein K11754 - 6.3.2.12,6.3.2.17 2.974e-210 659.0
PJS1_k127_1378982_8 pilus assembly protein FimV K08086 - - 4.3e-205 666.0
PJS1_k127_1378982_9 Nucleoside H+ symporter K05820 - - 3.362e-204 640.0
PJS1_k127_1440712_0 PFAM Alpha amylase, catalytic K05341,K05343 - 2.4.1.4,3.2.1.1,5.4.99.16 0.0 1086.0
PJS1_k127_1440712_1 Sucrose synthase K00696 - 2.4.1.14 0.0 1074.0
PJS1_k127_1440712_10 Dihydrodipicolinate reductase, C-terminus K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 383.0
PJS1_k127_1440712_11 Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily K03615 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 369.0
PJS1_k127_1440712_12 HAD-superfamily hydrolase, subfamily IIB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 346.0
PJS1_k127_1440712_13 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000434 327.0
PJS1_k127_1440712_14 PfkB domain protein K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007791 332.0
PJS1_k127_1440712_15 COG0668 Small-conductance mechanosensitive channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000197 273.0
PJS1_k127_1440712_16 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002396 263.0
PJS1_k127_1440712_17 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000000000000000000000000003058 142.0
PJS1_k127_1440712_18 COG1734 DnaK suppressor protein K06204 - - 0.0001164 46.0
PJS1_k127_1440712_2 COG0659 Sulfate permease and related transporters (MFS superfamily) K03321 - - 1.838e-258 809.0
PJS1_k127_1440712_3 Citrate transporter - - - 2.246e-208 657.0
PJS1_k127_1440712_4 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 591.0
PJS1_k127_1440712_5 PFAM sodium hydrogen exchanger - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006443 556.0
PJS1_k127_1440712_6 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 544.0
PJS1_k127_1440712_7 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003962 570.0
PJS1_k127_1440712_8 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004065 412.0
PJS1_k127_1440712_9 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 400.0
PJS1_k127_1461534_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1499.0
PJS1_k127_1461534_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0 1048.0
PJS1_k127_1461534_10 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 6.383e-225 698.0
PJS1_k127_1461534_11 Involved in the TonB-independent uptake of proteins K03641 - - 6.883e-223 696.0
PJS1_k127_1461534_12 Tetratricopeptide repeats - - - 2.979e-217 689.0
PJS1_k127_1461534_13 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 2.126e-216 681.0
PJS1_k127_1461534_14 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 4.474e-216 690.0
PJS1_k127_1461534_15 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 1.749e-206 647.0
PJS1_k127_1461534_16 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 3.799e-201 637.0
PJS1_k127_1461534_17 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 2.124e-200 627.0
PJS1_k127_1461534_18 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 3.17e-200 626.0
PJS1_k127_1461534_19 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 612.0
PJS1_k127_1461534_2 PFAM chemotaxis sensory transducer K03776 - - 2.183e-311 966.0
PJS1_k127_1461534_20 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006306 619.0
PJS1_k127_1461534_21 PFAM ATP-binding region ATPase domain protein K07645 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 604.0
PJS1_k127_1461534_22 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007985 593.0
PJS1_k127_1461534_23 histidine kinase HAMP region domain protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 576.0
PJS1_k127_1461534_24 SMART CheW domain protein K03415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006832 563.0
PJS1_k127_1461534_25 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 550.0
PJS1_k127_1461534_26 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 533.0
PJS1_k127_1461534_27 SMART CheW domain protein K03415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 529.0
PJS1_k127_1461534_28 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006048 522.0
PJS1_k127_1461534_29 SMART chemotaxis sensory transducer - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008466 523.0
PJS1_k127_1461534_3 PFAM phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 2.986e-286 886.0
PJS1_k127_1461534_30 D-ala D-ala ligase N-terminus K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 496.0
PJS1_k127_1461534_31 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006919 487.0
PJS1_k127_1461534_32 PFAM MotA TolQ ExbB proton channel K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 471.0
PJS1_k127_1461534_33 UbiA prenyltransferase family K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007943 465.0
PJS1_k127_1461534_34 PFAM OmpA MotB domain protein K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 440.0
PJS1_k127_1461534_35 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006755 418.0
PJS1_k127_1461534_36 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 415.0
PJS1_k127_1461534_37 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003499 422.0
PJS1_k127_1461534_38 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 392.0
PJS1_k127_1461534_39 PFAM MotA TolQ ExbB proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 388.0
PJS1_k127_1461534_4 PFAM ATP-binding region ATPase domain protein K03407 - 2.7.13.3 2.432e-254 797.0
PJS1_k127_1461534_40 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 389.0
PJS1_k127_1461534_41 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000523 384.0
PJS1_k127_1461534_42 Peptidase family M23 K08259 - 3.4.24.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 376.0
PJS1_k127_1461534_43 PFAM response regulator receiver K02483,K07666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 370.0
PJS1_k127_1461534_44 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008144,GO:0016829,GO:0016840,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:1901681,GO:1904047 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009187 357.0
PJS1_k127_1461534_45 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 355.0
PJS1_k127_1461534_46 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006535 327.0
PJS1_k127_1461534_47 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 323.0
PJS1_k127_1461534_48 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 315.0
PJS1_k127_1461534_49 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000702 302.0
PJS1_k127_1461534_5 Mur ligase family, catalytic domain K01924 - 6.3.2.8 4.327e-250 777.0
PJS1_k127_1461534_50 Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006358 296.0
PJS1_k127_1461534_51 VirC1 protein K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 295.0
PJS1_k127_1461534_52 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 286.0
PJS1_k127_1461534_53 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003406 280.0
PJS1_k127_1461534_54 MraZ protein, putative antitoxin-like K03925 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001165 247.0
PJS1_k127_1461534_55 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000984 245.0
PJS1_k127_1461534_56 Cytochrome b/b6/petB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001471 248.0
PJS1_k127_1461534_57 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002006 256.0
PJS1_k127_1461534_58 PFAM response regulator receiver K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000003912 235.0
PJS1_k127_1461534_59 PFAM chemotaxis K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000001181 245.0
PJS1_k127_1461534_6 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 2.156e-246 772.0
PJS1_k127_1461534_60 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000004893 229.0
PJS1_k127_1461534_61 OmpA family K03640 - - 0.000000000000000000000000000000000000000000000000000000000000000005602 229.0
PJS1_k127_1461534_62 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000000000000000000000000000001303 221.0
PJS1_k127_1461534_63 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000000000000000000000002454 213.0
PJS1_k127_1461534_64 TolA C-terminal K03646 - - 0.000000000000000000000000000000000000000000000000000000000179 212.0
PJS1_k127_1461534_65 Outer membrane lipoprotein LolB K02494 - - 0.0000000000000000000000000000000000000000000000000000000002795 209.0
PJS1_k127_1461534_66 chemotaxis, protein - - - 0.00000000000000000000000000000000000000000000000000000007246 211.0
PJS1_k127_1461534_67 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000000000000000000000000000002699 194.0
PJS1_k127_1461534_68 - - - - 0.00000000000000000000000000000000000000000000000008286 184.0
PJS1_k127_1461534_69 Dihaem cytochrome c - - - 0.00000000000000000000000000000000000000000000000137 186.0
PJS1_k127_1461534_7 SMART GGDEF domain containing protein - - - 6.791e-231 733.0
PJS1_k127_1461534_70 Domain of unknown function (DUF1924) - - - 0.0000000000000000000000000000000000000000000002612 171.0
PJS1_k127_1461534_71 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.0000000000000000000000000000000000000000000006076 171.0
PJS1_k127_1461534_72 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000000005717 168.0
PJS1_k127_1461534_73 Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02403 - - 0.00000000000000000000000000000000000000000002045 166.0
PJS1_k127_1461534_74 Ribonucleotide reductase subunit alpha - - - 0.00000000000000000000000000000000000000001218 158.0
PJS1_k127_1461534_75 Protein of unknown function (DUF721) - - - 0.0000000000000000000000000000000002171 140.0
PJS1_k127_1461534_76 transmembrane signaling receptor activity - - - 0.0000000000000000000000000000000003393 143.0
PJS1_k127_1461534_77 translation initiation factor activity - - - 0.0000000000000000000000003556 107.0
PJS1_k127_1461534_78 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.000000000000000000000004443 107.0
PJS1_k127_1461534_79 - - - - 0.000000000000000001098 97.0
PJS1_k127_1461534_8 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 1.05e-230 718.0
PJS1_k127_1461534_80 Flagellar assembly protein T, middle domain - - - 0.0000000000000000174 96.0
PJS1_k127_1461534_82 Biopolymer transport protein ExbD/TolR K03559 - - 0.000007562 48.0
PJS1_k127_1461534_83 Bacteriophage replication gene A protein (GPA) - - - 0.0002045 45.0
PJS1_k127_1461534_9 Histidine kinase K03407 GO:0003674,GO:0005488,GO:0005515,GO:0019904 2.7.13.3 8.483e-230 732.0
PJS1_k127_1690495_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1205.0
PJS1_k127_1690495_1 Pyridine nucleotide-disulphide oxidoreductase K00528 - 1.18.1.2,1.19.1.1 7.973e-229 714.0
PJS1_k127_1690495_10 Glycine cleavage system K03567 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 316.0
PJS1_k127_1690495_11 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008361 252.0
PJS1_k127_1690495_12 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000005998 237.0
PJS1_k127_1690495_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 6.497e-205 640.0
PJS1_k127_1690495_3 NeuB family K03856 - 2.5.1.54 1.864e-196 627.0
PJS1_k127_1690495_4 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 569.0
PJS1_k127_1690495_5 TIGRFAM DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005479 554.0
PJS1_k127_1690495_6 Chorismate mutase type II K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 495.0
PJS1_k127_1690495_7 PFAM Metal-dependent phosphohydrolase, HD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006302 503.0
PJS1_k127_1690495_8 Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 454.0
PJS1_k127_1690495_9 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 368.0
PJS1_k127_1732176_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 3.524e-238 741.0
PJS1_k127_1732176_1 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005225 534.0
PJS1_k127_1732176_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007394 528.0
PJS1_k127_1732176_3 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000928 496.0
PJS1_k127_1732176_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 469.0
PJS1_k127_1732176_5 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000000000000000004508 147.0
PJS1_k127_1732176_6 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.000000000000000000000000003364 111.0
PJS1_k127_1732176_7 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000000000001821 108.0
PJS1_k127_1732176_8 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000008341 74.0
PJS1_k127_175232_0 PFAM Carbamoyl-phosphate synthase L chain ATP-binding K01955 - 6.3.5.5 0.0 1984.0
PJS1_k127_175232_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1085.0
PJS1_k127_175232_10 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 433.0
PJS1_k127_175232_11 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 371.0
PJS1_k127_175232_12 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 349.0
PJS1_k127_175232_13 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 341.0
PJS1_k127_175232_14 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004031 333.0
PJS1_k127_175232_15 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008263 311.0
PJS1_k127_175232_16 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004111 277.0
PJS1_k127_175232_17 ACT domain K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000003006 259.0
PJS1_k127_175232_18 CRS1_YhbY K07574 - - 0.0000000000000000000000000000000000000000000005619 168.0
PJS1_k127_175232_19 Protein of unknown function (DUF1566) - - - 0.0000000000000000000000000000000542 134.0
PJS1_k127_175232_2 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 0.0 1017.0
PJS1_k127_175232_20 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.00000000000000000002516 94.0
PJS1_k127_175232_3 PFAM thiamine pyrophosphate K01652 - 2.2.1.6 0.0 1013.0
PJS1_k127_175232_4 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.104e-296 914.0
PJS1_k127_175232_5 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 1.492e-248 771.0
PJS1_k127_175232_6 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 8.909e-207 649.0
PJS1_k127_175232_7 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 8.437e-205 639.0
PJS1_k127_175232_8 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009313 549.0
PJS1_k127_175232_9 DAHP synthetase I family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 505.0
PJS1_k127_1818208_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 1.909e-319 987.0
PJS1_k127_1818208_1 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 3.578e-278 859.0
PJS1_k127_1818208_10 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 390.0
PJS1_k127_1818208_11 Cytidylyltransferase family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 357.0
PJS1_k127_1818208_12 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 331.0
PJS1_k127_1818208_13 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009219 304.0
PJS1_k127_1818208_14 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 288.0
PJS1_k127_1818208_15 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.00000000000000000000000000000000000000002601 153.0
PJS1_k127_1818208_16 Hemerythrin-like metal-binding protein - - - 0.00000000000000005334 88.0
PJS1_k127_1818208_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 3.608e-241 753.0
PJS1_k127_1818208_3 Ammonium Transporter Family K03320,K06580 - - 2.018e-238 740.0
PJS1_k127_1818208_4 SMART PDZ DHR GLGF domain protein K11749 - - 1.738e-203 644.0
PJS1_k127_1818208_5 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000465 614.0
PJS1_k127_1818208_6 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 490.0
PJS1_k127_1818208_7 Flagellar Assembly Protein A K09749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 474.0
PJS1_k127_1818208_8 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 415.0
PJS1_k127_1818208_9 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005822 407.0
PJS1_k127_1852762_0 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 2.752e-313 975.0
PJS1_k127_1852762_1 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005399 324.0
PJS1_k127_1897084_0 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 0.0 1194.0
PJS1_k127_1897084_1 PFAM ABC transporter related - - - 1.243e-316 975.0
PJS1_k127_1897084_10 Bacterial protein of unknown function (Gcw_chp) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 316.0
PJS1_k127_1897084_11 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 302.0
PJS1_k127_1897084_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006992 297.0
PJS1_k127_1897084_13 Fimbrial assembly protein (PilN) K02663 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000011 267.0
PJS1_k127_1897084_14 Pilus assembly protein, PilP K02665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001374 251.0
PJS1_k127_1897084_15 cyclic nucleotide-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000003831 248.0
PJS1_k127_1897084_16 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000000000000000000000000000002911 201.0
PJS1_k127_1897084_17 Transcriptional regulator, Crp Fnr family - - - 0.0000000000000000000000000000000000000000000000000000004919 201.0
PJS1_k127_1897084_18 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000000009464 187.0
PJS1_k127_1897084_19 Sterol-binding domain protein - - - 0.000000000000000000000000000000000000000000002708 168.0
PJS1_k127_1897084_2 PFAM type II and III secretion system protein K02666 - - 6.408e-262 822.0
PJS1_k127_1897084_20 Membrane fusogenic activity K09806 - - 0.0000000000000000000000006699 106.0
PJS1_k127_1897084_22 Hemerythrin HHE cation binding domain K07216 - - 0.000002565 59.0
PJS1_k127_1897084_3 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 614.0
PJS1_k127_1897084_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 590.0
PJS1_k127_1897084_5 peptidase, U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 565.0
PJS1_k127_1897084_6 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 539.0
PJS1_k127_1897084_7 Radical_SAM C-terminal domain K07139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 470.0
PJS1_k127_1897084_8 Peptidase U32 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 425.0
PJS1_k127_1897084_9 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004991 362.0
PJS1_k127_1951622_0 Sulfatase - - - 4.647e-300 932.0
PJS1_k127_1951622_1 HI0933-like protein K07007 - - 7.636e-210 657.0
PJS1_k127_1951622_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 394.0
PJS1_k127_1951622_3 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 366.0
PJS1_k127_1951622_4 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 348.0
PJS1_k127_1951622_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000003062 267.0
PJS1_k127_1951622_6 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000000000000000000000000000000000000000004759 181.0
PJS1_k127_1951622_7 Arsenical resistance operon trans-acting repressor ArsD - - - 0.0000000000000000000000000003484 117.0
PJS1_k127_1957968_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1731.0
PJS1_k127_1957968_1 General secretory system II protein E domain protein K02454,K02652,K12276 - - 2.677e-307 948.0
PJS1_k127_1957968_10 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000002846 130.0
PJS1_k127_1957968_11 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000000000003309 133.0
PJS1_k127_1957968_12 Prokaryotic N-terminal methylation motif K10924 - - 0.00000000000000000000000000006084 121.0
PJS1_k127_1957968_13 Protein of unknown function (DUF2892) - - - 0.000000000000000000000000001916 112.0
PJS1_k127_1957968_2 Virulence factor membrane-bound polymerase, C-terminal - - - 3.574e-213 681.0
PJS1_k127_1957968_3 PFAM Type II secretion system F domain K02455,K12278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000554 607.0
PJS1_k127_1957968_4 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006111 462.0
PJS1_k127_1957968_5 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005215 267.0
PJS1_k127_1957968_6 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000000000000000000001797 224.0
PJS1_k127_1957968_7 - - - - 0.0000000000000000000000000000000000000000000000000000000002315 209.0
PJS1_k127_1957968_8 Bacterial SH3 domain - - - 0.00000000000000000000000000000000000000000000000000000001754 208.0
PJS1_k127_1957968_9 general secretion pathway protein K02456,K02457,K02458,K10930,K12285 - - 0.0000000000000000000000000000000000000000000000000005557 195.0
PJS1_k127_1987781_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1086.0
PJS1_k127_1987781_1 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 3.427e-306 948.0
PJS1_k127_1987781_10 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 285.0
PJS1_k127_1987781_11 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009949 252.0
PJS1_k127_1987781_12 Transcriptional regulator K13643 - - 0.00000000000000000000000000000000000000000000000000000000000000001435 227.0
PJS1_k127_1987781_13 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.000000000000000000000000000000000000000000000000000000000000003967 222.0
PJS1_k127_1987781_14 Ferredoxin, 2Fe-2S type, ISC system K04755 - - 0.0000000000000000000000000000000000000000000000000000000002251 203.0
PJS1_k127_1987781_15 TIGRFAM iron-sulfur cluster assembly protein IscA K13628 - - 0.000000000000000000000000000000000000000000000000000000003277 199.0
PJS1_k127_1987781_16 PFAM cytochrome c class I K08738 - - 0.00000000000000000000000000000000000008257 144.0
PJS1_k127_1987781_17 Iron-sulphur cluster assembly - - - 0.00000000000000000000000000002258 120.0
PJS1_k127_1987781_18 Cytochrome c K08738 - - 0.000000000000000000002766 102.0
PJS1_k127_1987781_19 Cytochrome c, class I K08738 - - 0.0000000000000005618 82.0
PJS1_k127_1987781_2 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 2.664e-235 730.0
PJS1_k127_1987781_3 Domain of unknown function DUF21 - - - 2.55e-208 654.0
PJS1_k127_1987781_4 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 455.0
PJS1_k127_1987781_5 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 446.0
PJS1_k127_1987781_6 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 436.0
PJS1_k127_1987781_7 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 372.0
PJS1_k127_1987781_8 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 343.0
PJS1_k127_1987781_9 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 319.0
PJS1_k127_1990255_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00436 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 2.35e-300 925.0
PJS1_k127_1990255_1 Hydrogenase formation hypA family K04654 - - 4.34e-207 653.0
PJS1_k127_1990255_2 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 466.0
PJS1_k127_1990255_3 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K18007 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009526 367.0
PJS1_k127_1990255_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008101 303.0
PJS1_k127_1990255_5 hydrogenase maturation protease - - - 0.00000000000000000000000000000000000000000000000000001429 192.0
PJS1_k127_1990255_6 Protein of unknown function (DUF559) K07316 - 2.1.1.72 0.0000000000000000000000000000000000000000006409 161.0
PJS1_k127_1990255_7 hydrogenase expression formation protein HypE K04655 - - 0.000000000000000000000000000003468 128.0
PJS1_k127_1990255_8 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0000002489 58.0
PJS1_k127_1990255_9 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K18006 - 1.12.1.2 0.0000009685 50.0
PJS1_k127_2031308_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1712.0
PJS1_k127_2031308_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1412.0
PJS1_k127_2031308_10 Ribosomal protein L11 methyltransferase (PrmA) K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 505.0
PJS1_k127_2031308_11 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 512.0
PJS1_k127_2031308_12 Thiamine monophosphate synthase K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 475.0
PJS1_k127_2031308_13 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 459.0
PJS1_k127_2031308_14 repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006526 437.0
PJS1_k127_2031308_15 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 391.0
PJS1_k127_2031308_16 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006043 358.0
PJS1_k127_2031308_17 Probable molybdopterin binding domain K03831 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 334.0
PJS1_k127_2031308_18 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004807 275.0
PJS1_k127_2031308_19 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002599 269.0
PJS1_k127_2031308_2 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1213.0
PJS1_k127_2031308_20 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000001061 241.0
PJS1_k127_2031308_21 TIGRFAM MJ0042 family finger-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004555 250.0
PJS1_k127_2031308_22 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000004017 244.0
PJS1_k127_2031308_23 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000000000000000009039 224.0
PJS1_k127_2031308_24 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000000000000000000000000000000000009855 211.0
PJS1_k127_2031308_25 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.00000000000000000000000000000000000000000000000000000002638 214.0
PJS1_k127_2031308_26 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000000000000000000000000000009342 184.0
PJS1_k127_2031308_27 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000002829 185.0
PJS1_k127_2031308_28 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000000000000009984 167.0
PJS1_k127_2031308_29 PFAM CutA1 divalent ion tolerance protein K03926 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914 - 0.0000000000000000000000000000000000000007976 150.0
PJS1_k127_2031308_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 5.617e-314 967.0
PJS1_k127_2031308_30 toxin-antitoxin pair type II binding K18923,K19161 GO:0006355,GO:0006950,GO:0006974,GO:0008150,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0033554,GO:0044092,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000007935 146.0
PJS1_k127_2031308_31 MoeA C-terminal region (domain IV) K03750,K07219 - 2.10.1.1 0.000000000000000000000000000000000008527 138.0
PJS1_k127_2031308_32 Protein of unknown function (DUF2288) - - - 0.0000000000000000000000000000004502 130.0
PJS1_k127_2031308_34 - - - - 0.000000000000000000004524 96.0
PJS1_k127_2031308_35 TIGRFAM Addiction module toxin, RelE StbE K06218 - - 0.0000000007394 63.0
PJS1_k127_2031308_36 - - - - 0.000000008964 59.0
PJS1_k127_2031308_4 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 1.922e-294 916.0
PJS1_k127_2031308_5 PFAM Polyphosphate kinase 2 - - - 1.899e-293 904.0
PJS1_k127_2031308_6 PFAM Carbamoyl-phosphate synthase L chain ATP-binding K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 3.691e-278 858.0
PJS1_k127_2031308_7 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 3.811e-202 646.0
PJS1_k127_2031308_8 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 574.0
PJS1_k127_2031308_9 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 571.0
PJS1_k127_2148040_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0 1022.0
PJS1_k127_2148040_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 1.068e-241 755.0
PJS1_k127_2148040_10 PFAM Carbohydrate-selective porin OprB K07267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007336 273.0
PJS1_k127_2148040_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000007092 243.0
PJS1_k127_2148040_12 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.000000000000000000000000000000000000000000000001696 174.0
PJS1_k127_2148040_13 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000000000000003952 166.0
PJS1_k127_2148040_14 Pfam:DUF1049 K08992 - - 0.00000000000000000000000000002454 119.0
PJS1_k127_2148040_15 - - - - 0.00000002248 56.0
PJS1_k127_2148040_2 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 1.725e-205 644.0
PJS1_k127_2148040_3 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009024 583.0
PJS1_k127_2148040_4 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 564.0
PJS1_k127_2148040_5 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 547.0
PJS1_k127_2148040_6 Pyridoxal-phosphate dependent enzyme K12339 GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 521.0
PJS1_k127_2148040_7 pfkB family carbohydrate kinase K03272,K21344 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006735 523.0
PJS1_k127_2148040_8 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 449.0
PJS1_k127_2148040_9 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 366.0
PJS1_k127_2167141_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 8.819e-315 986.0
PJS1_k127_2167141_1 ATP ADP translocase K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 477.0
PJS1_k127_2167141_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 373.0
PJS1_k127_2167141_3 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 359.0
PJS1_k127_2167141_4 Flagellar regulatory protein FleQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009412 263.0
PJS1_k127_2265892_0 RNB K01147 - 3.1.13.1 2.389e-310 963.0
PJS1_k127_2265892_1 N-6 DNA Methylase K03427 - 2.1.1.72 3.315e-300 923.0
PJS1_k127_2265892_10 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 411.0
PJS1_k127_2265892_11 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 357.0
PJS1_k127_2265892_12 SMART metal-dependent phosphohydrolase HD region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 361.0
PJS1_k127_2265892_13 TonB C terminal K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005558 363.0
PJS1_k127_2265892_14 HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007747 342.0
PJS1_k127_2265892_15 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 345.0
PJS1_k127_2265892_16 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 341.0
PJS1_k127_2265892_17 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 329.0
PJS1_k127_2265892_18 Bacterial regulatory proteins, tetR family K05501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 310.0
PJS1_k127_2265892_19 response regulator, receiver K07315,K20977 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005483 313.0
PJS1_k127_2265892_2 DAHP synthetase I family K03856 - 2.5.1.54 2.226e-214 669.0
PJS1_k127_2265892_20 Bacterial regulatory protein, Fis family K15012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007162 265.0
PJS1_k127_2265892_21 Domain of unknown function (DUF1841) - - - 0.0000000000000000000000000000000000000000000000000000000000000000002121 231.0
PJS1_k127_2265892_22 Part of a membrane complex involved in electron transport K03616 - - 0.0000000000000000000000000000000000000000000000000000000000000000003504 237.0
PJS1_k127_2265892_23 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000000000000001003 200.0
PJS1_k127_2265892_24 - - - - 0.0000000000000000000000000000000000000000000000000000000914 203.0
PJS1_k127_2265892_25 Chemoreceptor zinc-binding domain - - - 0.000000000000000000000000000000000007367 141.0
PJS1_k127_2265892_26 Protein of unknown function (DUF493) K09158 - - 0.000000000000000000000000000002044 122.0
PJS1_k127_2265892_27 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000002145 126.0
PJS1_k127_2265892_28 Cytochrome C oxidase, cbb3-type, subunit III K08738 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000007517 114.0
PJS1_k127_2265892_29 Copper chaperone PCu(A)C K09796 - - 0.0000000000000000006117 92.0
PJS1_k127_2265892_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 568.0
PJS1_k127_2265892_30 Protein of unknown function (DUF2934) - - - 0.00000000000000001362 88.0
PJS1_k127_2265892_4 Histidine kinase K07678 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009745 618.0
PJS1_k127_2265892_5 PFAM ATP-binding region ATPase domain protein K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 548.0
PJS1_k127_2265892_6 PFAM peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 541.0
PJS1_k127_2265892_7 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005916 531.0
PJS1_k127_2265892_8 PFAM aminotransferase class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008196 484.0
PJS1_k127_2265892_9 HsdM N-terminal domain K03427 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008042 437.0
PJS1_k127_2273774_0 protein synthesis factor, GTP-binding K06207 - - 3.08e-321 990.0
PJS1_k127_2273774_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 3.19e-257 801.0
PJS1_k127_2273774_2 RmuC family K09760 - - 2.01e-199 631.0
PJS1_k127_2273774_3 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 329.0
PJS1_k127_2273774_4 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005724 243.0
PJS1_k127_2273774_5 Hsp90 protein K04079 - - 0.00000000000000000000000000000000000000000000000000000009378 196.0
PJS1_k127_2273774_6 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000005457 149.0
PJS1_k127_2338713_0 diguanylate cyclase K13590 - 2.7.7.65 4.654e-234 737.0
PJS1_k127_2338713_1 PFAM peptidase S1 and S6 chymotrypsin Hap K04691,K04772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 527.0
PJS1_k127_2338713_10 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 328.0
PJS1_k127_2338713_11 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000006123 243.0
PJS1_k127_2338713_12 HIT domain K02503 - - 0.000000000000000000000000000000000000000000000000000000000000368 211.0
PJS1_k127_2338713_13 Phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.0000000000000000000000000000000000000000001042 167.0
PJS1_k127_2338713_14 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000000001076 102.0
PJS1_k127_2338713_15 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000000000000000007621 99.0
PJS1_k127_2338713_16 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase). Responsible for synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs K06177 - 5.4.99.28,5.4.99.29 0.000000000001597 68.0
PJS1_k127_2338713_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 524.0
PJS1_k127_2338713_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000603 469.0
PJS1_k127_2338713_4 Histidine biosynthesis protein K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 414.0
PJS1_k127_2338713_5 histidine kinase dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 396.0
PJS1_k127_2338713_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004964 381.0
PJS1_k127_2338713_7 NIF3 (NGG1p interacting factor 3) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 362.0
PJS1_k127_2338713_8 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006581 352.0
PJS1_k127_2338713_9 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 349.0
PJS1_k127_2353582_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 7.063e-251 778.0
PJS1_k127_2353582_1 PFAM aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 581.0
PJS1_k127_2353582_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 380.0
PJS1_k127_2353582_11 Forms part of the polypeptide exit tunnel K02926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007853 348.0
PJS1_k127_2353582_12 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007215 330.0
PJS1_k127_2353582_13 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 299.0
PJS1_k127_2353582_14 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001742 280.0
PJS1_k127_2353582_15 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001128 252.0
PJS1_k127_2353582_16 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008416 251.0
PJS1_k127_2353582_17 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A K02876 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007366 246.0
PJS1_k127_2353582_18 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.000000000000000000000000000000000000000000000000000000000000000000001327 256.0
PJS1_k127_2353582_19 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000000000000000000004858 236.0
PJS1_k127_2353582_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007601 574.0
PJS1_k127_2353582_20 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000000000000000000000000002256 233.0
PJS1_k127_2353582_21 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000000000000000000000000000000002354 234.0
PJS1_k127_2353582_22 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000000000005279 230.0
PJS1_k127_2353582_23 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000000000000000000004726 217.0
PJS1_k127_2353582_24 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000000000005376 203.0
PJS1_k127_2353582_25 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000000000000000000000000000006265 202.0
PJS1_k127_2353582_26 elongation factor Tu K02358 - - 0.000000000000000000000000000000000000000000000000000000001822 199.0
PJS1_k127_2353582_27 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000000000000000000000002789 196.0
PJS1_k127_2353582_28 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000000000000000000000000000000001266 187.0
PJS1_k127_2353582_29 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000000000000009296 180.0
PJS1_k127_2353582_3 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 544.0
PJS1_k127_2353582_30 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000000000000000000000000000023 177.0
PJS1_k127_2353582_31 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.00000000000000000000000000000000000000000000002397 171.0
PJS1_k127_2353582_32 MazG-like family - - - 0.000000000000000000000000000000000000000001238 162.0
PJS1_k127_2353582_33 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000000000001592 147.0
PJS1_k127_2353582_34 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.00000000000000000000000000000000000001675 145.0
PJS1_k127_2353582_35 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000000000000000005538 145.0
PJS1_k127_2353582_36 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000000000000000000000000006811 161.0
PJS1_k127_2353582_37 Ribosomal protein L30p/L7e K02907 - - 0.00000000000000000000000001916 108.0
PJS1_k127_2353582_38 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000000000007025 90.0
PJS1_k127_2353582_39 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000006773 74.0
PJS1_k127_2353582_4 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 539.0
PJS1_k127_2353582_40 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.0000000001094 70.0
PJS1_k127_2353582_41 response regulator K02282,K07687,K07688,K07689,K07690,K13246 - 3.1.4.52 0.0000000002239 73.0
PJS1_k127_2353582_5 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 524.0
PJS1_k127_2353582_6 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000565 527.0
PJS1_k127_2353582_7 Rhodanese Homology Domain K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 517.0
PJS1_k127_2353582_8 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002931 415.0
PJS1_k127_2353582_9 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 383.0
PJS1_k127_2482864_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 3.77e-321 1002.0
PJS1_k127_2482864_1 Arginyl tRNA synthetase N terminal dom K01887 - 6.1.1.19 5.125e-318 981.0
PJS1_k127_2482864_10 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 422.0
PJS1_k127_2482864_11 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004744 413.0
PJS1_k127_2482864_12 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 385.0
PJS1_k127_2482864_13 PFAM cytochrome C oxidase mono-heme subunit FixO K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 365.0
PJS1_k127_2482864_14 Glutathione S-transferase, C-terminal domain K03599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002801 338.0
PJS1_k127_2482864_15 rod shape-determining protein MreD K03571 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004081 257.0
PJS1_k127_2482864_16 DSBA-like thioredoxin domain K03673 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001298 253.0
PJS1_k127_2482864_17 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001758 240.0
PJS1_k127_2482864_18 FixH - - - 0.0000000000000000000000000000000000000000000000000000000000000001372 224.0
PJS1_k127_2482864_19 Stringent starvation protein B K03600 - - 0.000000000000000000000000000000000000000000000000000001201 195.0
PJS1_k127_2482864_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.596e-310 956.0
PJS1_k127_2482864_20 Sporulation related domain - - - 0.00000000000000000000000000000000000000000000000002209 185.0
PJS1_k127_2482864_21 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000000227 164.0
PJS1_k127_2482864_22 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000001151 147.0
PJS1_k127_2482864_23 PFAM cytochrome c oxidase subunit I K00404 - 1.9.3.1 0.000000000000000000000000004567 110.0
PJS1_k127_2482864_24 Cbb3-type cytochrome oxidase component FixQ - - - 0.000000000000000000009751 93.0
PJS1_k127_2482864_26 - - - - 0.0000168 52.0
PJS1_k127_2482864_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 7.084e-283 874.0
PJS1_k127_2482864_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 6.608e-272 841.0
PJS1_k127_2482864_5 TIGRFAM cytochrome c oxidase accessory protein CcoG - - - 1.712e-247 770.0
PJS1_k127_2482864_6 Nitronate monooxygenase K00459 - 1.13.12.16 4.715e-231 720.0
PJS1_k127_2482864_7 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 1.444e-210 656.0
PJS1_k127_2482864_8 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 578.0
PJS1_k127_2482864_9 Sigma-70 factor, region 1.2 K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 433.0
PJS1_k127_248388_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 1.165e-254 792.0
PJS1_k127_248388_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 6.06e-224 699.0
PJS1_k127_248388_10 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000307 269.0
PJS1_k127_248388_11 ATPases involved in chromosome partitioning - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000131 256.0
PJS1_k127_248388_12 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000000000000000000000000003676 232.0
PJS1_k127_248388_13 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000004728 236.0
PJS1_k127_248388_14 Caenorhabditis protein of unknown function, DUF268 - - - 0.0000000000000000000000000000000000000000000000000000000000000002207 228.0
PJS1_k127_248388_15 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000004417 198.0
PJS1_k127_248388_16 PFAM glycosyl transferase, family 9 K02849 - - 0.00000000000000000000000000000000000000000000000001654 193.0
PJS1_k127_248388_17 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.0000000000000000000000000000000000000000000007099 179.0
PJS1_k127_248388_18 17 kDa surface antigen K06077 - - 0.000000000000000000000000000000000000000000002156 169.0
PJS1_k127_248388_19 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.000000000000000000000000000000000000000000006884 164.0
PJS1_k127_248388_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 3.737e-197 624.0
PJS1_k127_248388_20 Outer membrane lipoprotein K06077 - - 0.0000000000000000000000000000000000000000521 162.0
PJS1_k127_248388_21 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins - - - 0.000000000000000000000000000005462 127.0
PJS1_k127_248388_22 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.00000731 51.0
PJS1_k127_248388_3 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 3.214e-194 610.0
PJS1_k127_248388_4 The glycine cleavage system catalyzes the degradation of glycine K00605 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000597 604.0
PJS1_k127_248388_5 dehydratase K08678 - 4.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 550.0
PJS1_k127_248388_6 pfkB family carbohydrate kinase K00852,K00856 - 2.7.1.15,2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 526.0
PJS1_k127_248388_7 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003852 455.0
PJS1_k127_248388_8 Fructosamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 419.0
PJS1_k127_248388_9 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008201 336.0
PJS1_k127_2622855_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 2.674e-316 976.0
PJS1_k127_2622855_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 1.156e-210 660.0
PJS1_k127_2622855_10 cheY-homologous receiver domain K01768,K07814,K20977 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008411 404.0
PJS1_k127_2622855_11 SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 318.0
PJS1_k127_2622855_12 Glycine zipper 2TM domain - - - 0.00000000000000000000000000000000000000000000000000000000004836 212.0
PJS1_k127_2622855_13 Protein of unknown function, DUF - - - 0.000000000000000000000000000000000000000000000000000001012 197.0
PJS1_k127_2622855_14 Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000002277 195.0
PJS1_k127_2622855_15 Histidine kinase-like ATPase domain - - - 0.000000000000000000000000000000000000000000000002254 184.0
PJS1_k127_2622855_16 Preprotein translocase subunit K03210 - - 0.000000000000000000000000000000000000000000007812 164.0
PJS1_k127_2622855_17 Histidine Phosphotransfer domain - - - 0.0000000000000000000000000000000000000001648 160.0
PJS1_k127_2622855_18 Response regulator receiver domain K03413 - - 0.000000000000000000000000000000000000003561 149.0
PJS1_k127_2622855_19 Iron-sulfur cluster assembly protein - - - 0.0000000000000000000000000000000000008475 144.0
PJS1_k127_2622855_2 Histidine kinase - - - 2.235e-203 677.0
PJS1_k127_2622855_20 Copper binding periplasmic protein CusF - - - 0.00000000000000000007224 93.0
PJS1_k127_2622855_21 - - - - 0.000000000369 67.0
PJS1_k127_2622855_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 2.881e-203 636.0
PJS1_k127_2622855_4 response regulator - - - 1.791e-201 642.0
PJS1_k127_2622855_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004918 570.0
PJS1_k127_2622855_6 Vitamin k epoxide reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 537.0
PJS1_k127_2622855_7 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 517.0
PJS1_k127_2622855_8 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 507.0
PJS1_k127_2622855_9 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 424.0
PJS1_k127_2625501_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1153.0
PJS1_k127_2625501_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1074.0
PJS1_k127_2625501_10 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 495.0
PJS1_k127_2625501_11 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 466.0
PJS1_k127_2625501_12 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 437.0
PJS1_k127_2625501_13 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 398.0
PJS1_k127_2625501_14 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 361.0
PJS1_k127_2625501_15 PFAM peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 355.0
PJS1_k127_2625501_16 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 350.0
PJS1_k127_2625501_17 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 344.0
PJS1_k127_2625501_18 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009048 323.0
PJS1_k127_2625501_19 Nudix N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 292.0
PJS1_k127_2625501_2 ABC transporter transmembrane region K06147 - - 6.938e-304 940.0
PJS1_k127_2625501_20 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001627 272.0
PJS1_k127_2625501_21 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007388 244.0
PJS1_k127_2625501_22 PFAM outer membrane chaperone Skp (OmpH) K06142 - - 0.000000000000000000000000000000000000000000000000000000000000000001987 230.0
PJS1_k127_2625501_23 NUDIX domain K08310 - 3.6.1.67 0.00000000000000000000000000000000000000000000000000000000000000001623 226.0
PJS1_k127_2625501_24 Thioredoxin K03671 - - 0.00000000000000000000000000000000000000000000000000000000000003936 214.0
PJS1_k127_2625501_25 Uncharacterized protein conserved in bacteria (DUF2141) - - - 0.0000000000000000000000000000000000000000000000000000000000006603 216.0
PJS1_k127_2625501_26 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000000000000000005841 188.0
PJS1_k127_2625501_27 Barstar (barnase inhibitor) - - - 0.0000000000000000000000000000000000000000000004908 172.0
PJS1_k127_2625501_28 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000000000000000000016 153.0
PJS1_k127_2625501_29 PFAM guanine-specific ribonuclease N1 and T1 K01167 - 3.1.27.3 0.00000000000000000000000000000000000001304 148.0
PJS1_k127_2625501_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.666e-259 804.0
PJS1_k127_2625501_30 Regulatory protein, FmdB family - - - 0.0000000000000000000000000000002002 124.0
PJS1_k127_2625501_31 secretion system protein K02453 - - 0.00000000000001673 87.0
PJS1_k127_2625501_32 Tetratricopeptide TPR_2 repeat protein - - - 0.00000001911 68.0
PJS1_k127_2625501_33 PilZ domain - - - 0.000008955 54.0
PJS1_k127_2625501_34 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.00002419 46.0
PJS1_k127_2625501_4 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 1.042e-205 650.0
PJS1_k127_2625501_5 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 1.389e-198 621.0
PJS1_k127_2625501_6 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 1.827e-196 617.0
PJS1_k127_2625501_7 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 603.0
PJS1_k127_2625501_8 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 504.0
PJS1_k127_2625501_9 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 507.0
PJS1_k127_2652285_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1234.0
PJS1_k127_2652285_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1169.0
PJS1_k127_2652285_10 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003621 451.0
PJS1_k127_2652285_11 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 429.0
PJS1_k127_2652285_12 Tetrapyrrole (Corrin/Porphyrin) Methylases K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 379.0
PJS1_k127_2652285_13 SpoU rRNA Methylase family K03437 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 357.0
PJS1_k127_2652285_14 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 346.0
PJS1_k127_2652285_15 Lysin motif K06194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008475 338.0
PJS1_k127_2652285_16 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000979 295.0
PJS1_k127_2652285_17 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 290.0
PJS1_k127_2652285_18 reductase K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 287.0
PJS1_k127_2652285_19 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000000000000000000000001331 234.0
PJS1_k127_2652285_2 B3/4 domain K01890 - 6.1.1.20 0.0 1151.0
PJS1_k127_2652285_20 Ribosomal protein L9, N-terminal domain K02939 - - 0.000000000000000000000000000000000000000000000000000000000000000001638 229.0
PJS1_k127_2652285_21 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000000000000000000001124 213.0
PJS1_k127_2652285_22 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000000000000006999 205.0
PJS1_k127_2652285_23 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000000000000000000000000000002789 196.0
PJS1_k127_2652285_24 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000000000000000000003116 191.0
PJS1_k127_2652285_25 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000000000000000000000000000000002805 194.0
PJS1_k127_2652285_26 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000007748 174.0
PJS1_k127_2652285_27 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000000000000001134 163.0
PJS1_k127_2652285_28 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000000000000003262 150.0
PJS1_k127_2652285_29 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000000000001105 121.0
PJS1_k127_2652285_3 Threonyl and Alanyl tRNA synthetase second additional domain K01868 - 6.1.1.3 0.0 1149.0
PJS1_k127_2652285_30 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000000000000001183 115.0
PJS1_k127_2652285_31 - - - - 0.0001147 45.0
PJS1_k127_2652285_4 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 1.769e-251 781.0
PJS1_k127_2652285_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 597.0
PJS1_k127_2652285_6 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008909 545.0
PJS1_k127_2652285_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 525.0
PJS1_k127_2652285_8 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 520.0
PJS1_k127_2652285_9 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645,K13935,K15355 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 517.0
PJS1_k127_2676452_0 Helicase - - - 0.0 1374.0
PJS1_k127_2676452_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 7.563e-263 813.0
PJS1_k127_2676452_10 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005177 519.0
PJS1_k127_2676452_11 2'-deoxycytidine 5'-triphosphate deaminase (DCD) K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 410.0
PJS1_k127_2676452_12 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 376.0
PJS1_k127_2676452_13 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 391.0
PJS1_k127_2676452_14 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009222 342.0
PJS1_k127_2676452_15 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007636 338.0
PJS1_k127_2676452_16 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009264 264.0
PJS1_k127_2676452_17 Tetratricopeptide repeat-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001272 263.0
PJS1_k127_2676452_18 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000001165 208.0
PJS1_k127_2676452_19 Helix-turn-helix domain K15539 - - 0.0000000000000000000000000000000000000000000000000000787 200.0
PJS1_k127_2676452_2 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 9.461e-238 740.0
PJS1_k127_2676452_20 Belongs to the 'phage' integrase family - - - 0.00000000000000000001196 98.0
PJS1_k127_2676452_3 MscS Mechanosensitive ion channel - - - 1.825e-237 743.0
PJS1_k127_2676452_4 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 9.878e-226 702.0
PJS1_k127_2676452_5 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 9.077e-215 674.0
PJS1_k127_2676452_6 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 2.195e-214 674.0
PJS1_k127_2676452_7 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 608.0
PJS1_k127_2676452_8 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 578.0
PJS1_k127_2676452_9 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 573.0
PJS1_k127_2788224_0 alpha-glucan phosphorylase K00688 - 2.4.1.1 0.0 1385.0
PJS1_k127_2788224_1 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1255.0
PJS1_k127_2788224_10 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000529 467.0
PJS1_k127_2788224_11 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005601 466.0
PJS1_k127_2788224_12 DNA polymerase alpha chain like domain K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 466.0
PJS1_k127_2788224_13 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 414.0
PJS1_k127_2788224_14 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006142 416.0
PJS1_k127_2788224_15 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 403.0
PJS1_k127_2788224_16 TIGRFAM Sua5 YciO YrdC YwlC family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 367.0
PJS1_k127_2788224_17 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 346.0
PJS1_k127_2788224_18 Amino-transferase class IV K02619 - 4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005399 324.0
PJS1_k127_2788224_19 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 315.0
PJS1_k127_2788224_2 Abc transporter K06158 - - 0.0 1048.0
PJS1_k127_2788224_20 signal transduction protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 304.0
PJS1_k127_2788224_21 Segregation and condensation complex subunit ScpB K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004917 281.0
PJS1_k127_2788224_22 abc transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001494 274.0
PJS1_k127_2788224_23 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001651 273.0
PJS1_k127_2788224_24 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003405 261.0
PJS1_k127_2788224_25 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000008973 264.0
PJS1_k127_2788224_26 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000007553 238.0
PJS1_k127_2788224_27 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000009442 136.0
PJS1_k127_2788224_28 Belongs to the UPF0125 (RnfH) family K09801 - - 0.0000000000000000000000000000001033 136.0
PJS1_k127_2788224_29 - - - - 0.00000000000000000000000000002271 123.0
PJS1_k127_2788224_3 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0 1028.0
PJS1_k127_2788224_4 General secretory system II protein E domain protein K02454,K02652,K12276 - - 3.597e-305 943.0
PJS1_k127_2788224_5 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 4.602e-284 894.0
PJS1_k127_2788224_6 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 2.35e-243 753.0
PJS1_k127_2788224_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 5.611e-236 734.0
PJS1_k127_2788224_8 Starch synthase catalytic domain K00703 - 2.4.1.21 4.197e-200 634.0
PJS1_k127_2788224_9 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 507.0
PJS1_k127_2904680_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1597.0
PJS1_k127_2904680_1 General secretory system II protein E domain protein K02454,K02652,K12276 - - 0.0 1341.0
PJS1_k127_2904680_10 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 615.0
PJS1_k127_2904680_11 PFAM permease YjgP YjgQ family protein K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 529.0
PJS1_k127_2904680_12 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009319 519.0
PJS1_k127_2904680_13 cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 518.0
PJS1_k127_2904680_14 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 492.0
PJS1_k127_2904680_15 Pfam Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 482.0
PJS1_k127_2904680_16 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 473.0
PJS1_k127_2904680_17 Transport permease protein K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 473.0
PJS1_k127_2904680_18 PFAM permease YjgP YjgQ family protein K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009228 478.0
PJS1_k127_2904680_19 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 465.0
PJS1_k127_2904680_2 Outer membrane protein beta-barrel family K02014 - - 3.311e-298 933.0
PJS1_k127_2904680_20 ABC-type polysaccharide polyol phosphate transport system ATPase component K01990,K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004996 448.0
PJS1_k127_2904680_21 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006253 417.0
PJS1_k127_2904680_22 Glycosyltransferase like family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007304 405.0
PJS1_k127_2904680_23 PFAM Type II secretion system F domain K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 398.0
PJS1_k127_2904680_24 O-linked N-acetylglucosamine transferase SPINDLY family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 394.0
PJS1_k127_2904680_25 SMART beta-lactamase domain protein K01120 - 3.1.4.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007172 366.0
PJS1_k127_2904680_26 Transposase IS116 IS110 IS902 family protein K07486 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 369.0
PJS1_k127_2904680_27 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 364.0
PJS1_k127_2904680_28 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 331.0
PJS1_k127_2904680_29 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007978 306.0
PJS1_k127_2904680_3 metal-dependent phosphohydrolase HD sub domain - - - 8.047e-268 832.0
PJS1_k127_2904680_30 beta-fructofuranosidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 298.0
PJS1_k127_2904680_31 Formylmethanofuran dehydrogenase, subunit e - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 293.0
PJS1_k127_2904680_32 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002807 286.0
PJS1_k127_2904680_33 WxcM-like, C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002339 248.0
PJS1_k127_2904680_34 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006954 250.0
PJS1_k127_2904680_35 PFAM DNA polymerase III chi subunit HolC K02339 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000009308 207.0
PJS1_k127_2904680_36 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000003217 201.0
PJS1_k127_2904680_37 glycolate biosynthetic process K01091,K06019,K16017,K22292 - 3.1.3.105,3.1.3.18,3.6.1.1 0.00000000000000000000000000000000000000000000001527 179.0
PJS1_k127_2904680_38 Protein of unknown function (DUF560) - - - 0.000000000000000000000000000000000000000000001145 182.0
PJS1_k127_2904680_39 FecR protein - - - 0.000000000000000000000000000000000000000000479 179.0
PJS1_k127_2904680_4 Cytochrome d1, heme K15864 - 1.7.2.1,1.7.99.1 2.268e-250 784.0
PJS1_k127_2904680_40 hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000001513 153.0
PJS1_k127_2904680_42 Protein of unknown function (DUF3106) - - - 0.0000000000000000000000000000000001396 138.0
PJS1_k127_2904680_43 Acyltransferase family - - - 0.00000000000000000000000000004324 130.0
PJS1_k127_2904680_44 cytochrome c5 - - - 0.00000000000000000000000001804 113.0
PJS1_k127_2904680_45 Belongs to the sulfur carrier protein TusA family - - - 0.00000000000000000000000002016 123.0
PJS1_k127_2904680_46 Belongs to the N-Me-Phe pilin family K02650 - - 0.000000000000000000000000243 111.0
PJS1_k127_2904680_47 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000000000000000000001901 106.0
PJS1_k127_2904680_5 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 3.655e-248 775.0
PJS1_k127_2904680_50 Transposase (IS116 IS110 IS902 family) - - - 0.00000002043 58.0
PJS1_k127_2904680_51 Protein of unknown function (DUF563) - - - 0.00000002991 66.0
PJS1_k127_2904680_52 TIGRFAM addiction module toxin, RelE StbE family - - - 0.00000005396 57.0
PJS1_k127_2904680_53 Transcriptional regulator - - - 0.0000002356 53.0
PJS1_k127_2904680_54 Methyltransferase domain - - - 0.0000003973 60.0
PJS1_k127_2904680_6 UDP binding domain - - - 5.305e-210 660.0
PJS1_k127_2904680_7 serine threonine protein kinase K12132 - 2.7.11.1 1.141e-204 644.0
PJS1_k127_2904680_8 Peptidase family M48 - - - 5.053e-203 648.0
PJS1_k127_2904680_9 Domain of unknown function (DUF4143) K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000583 614.0
PJS1_k127_2921180_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1099.0
PJS1_k127_2921180_1 PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic domain K01886 - 6.1.1.18 0.0 1087.0
PJS1_k127_2921180_10 PFAM Type II secretion system F domain K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007868 582.0
PJS1_k127_2921180_11 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000504 535.0
PJS1_k127_2921180_12 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 505.0
PJS1_k127_2921180_13 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008312 490.0
PJS1_k127_2921180_14 RESPONSE REGULATOR receiver K07712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 487.0
PJS1_k127_2921180_15 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007094 466.0
PJS1_k127_2921180_16 PFAM Peptidase S24 S26A S26B, conserved region K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 452.0
PJS1_k127_2921180_17 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 443.0
PJS1_k127_2921180_18 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005683 461.0
PJS1_k127_2921180_19 MucB/RseB C-terminal domain K03598 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 431.0
PJS1_k127_2921180_2 General secretory system II protein E domain protein K02454,K02652,K12276 - - 4.193e-310 961.0
PJS1_k127_2921180_20 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 427.0
PJS1_k127_2921180_21 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 418.0
PJS1_k127_2921180_22 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 407.0
PJS1_k127_2921180_23 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 366.0
PJS1_k127_2921180_24 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 359.0
PJS1_k127_2921180_25 TIGRFAM RNA polymerase sigma factor RpoE K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 362.0
PJS1_k127_2921180_26 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 366.0
PJS1_k127_2921180_27 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 357.0
PJS1_k127_2921180_28 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 322.0
PJS1_k127_2921180_29 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 322.0
PJS1_k127_2921180_3 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.355e-288 892.0
PJS1_k127_2921180_30 PFAM Mammalian cell entry related domain protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001304 273.0
PJS1_k127_2921180_31 MlaC protein K07323 - - 0.000000000000000000000000000000000000000000000000000000000000000000001878 241.0
PJS1_k127_2921180_32 PFAM Anti sigma-E protein RseA family protein K03597 - - 0.0000000000000000000000000000000000000000000000000000000000000000002278 232.0
PJS1_k127_2921180_33 general secretion pathway protein - - - 0.000000000000000000000000000000000000000000000000000000000000003195 232.0
PJS1_k127_2921180_34 membrane - - - 0.000000000000000000000000000000000000000000000000000004808 196.0
PJS1_k127_2921180_35 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000006514 205.0
PJS1_k127_2921180_36 Lipid A 3-O-deacylase (PagL) - - - 0.00000000000000000000000000000000000000000000000000007012 192.0
PJS1_k127_2921180_37 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000000000000000000000001034 188.0
PJS1_k127_2921180_38 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000000000003066 162.0
PJS1_k127_2921180_39 - - - - 0.000000000000000000000000000000000000000005695 176.0
PJS1_k127_2921180_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 1.809e-264 818.0
PJS1_k127_2921180_40 Domain of unknown function (DUF4845) - - - 0.00000000000000000000000000000000000005827 146.0
PJS1_k127_2921180_41 Belongs to the BolA IbaG family - - - 0.0000000000000000000000000000003062 124.0
PJS1_k127_2921180_42 Transcriptional regulator K07733 - - 0.0000000000000000000000000003997 115.0
PJS1_k127_2921180_43 PFAM Sulfate transporter antisigma-factor antagonist STAS K07122 - - 0.00000000000000000000000000375 117.0
PJS1_k127_2921180_44 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000007208 85.0
PJS1_k127_2921180_45 - - - - 0.00000000000000004343 87.0
PJS1_k127_2921180_5 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 2.599e-235 732.0
PJS1_k127_2921180_6 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 3.406e-231 732.0
PJS1_k127_2921180_7 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 5.669e-222 692.0
PJS1_k127_2921180_8 PFAM type II and III secretion system protein K02453 - - 4.529e-218 692.0
PJS1_k127_2921180_9 PFAM peptidase S1 and S6 chymotrypsin Hap K04771 - 3.4.21.107 4.787e-206 649.0
PJS1_k127_2939967_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 4.159e-227 708.0
PJS1_k127_2939967_1 Mannose-6-phosphate isomerase K16011 - 2.7.7.13,5.3.1.8 1.821e-225 705.0
PJS1_k127_2939967_2 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007151 493.0
PJS1_k127_2939967_3 Winged helix-turn-helix DNA-binding - - - 0.00000000000000000000000000000000000000000000000000004391 188.0
PJS1_k127_2939967_4 Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components K05785 - - 0.000000000000002815 79.0
PJS1_k127_2967079_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.0 2119.0
PJS1_k127_2967079_1 LapD/MoxY periplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003499 492.0
PJS1_k127_2967079_10 Protein of unknown function (DUF433) - - - 0.00000000000000000000000000000003483 126.0
PJS1_k127_2967079_11 Methyl-transferase - - - 0.000000000000000000000000000000501 124.0
PJS1_k127_2967079_12 Mut7-C RNAse domain - - - 0.0000000000000001803 81.0
PJS1_k127_2967079_13 - - - - 0.0000006155 51.0
PJS1_k127_2967079_2 COG1538 Outer membrane protein K12543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 416.0
PJS1_k127_2967079_3 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 358.0
PJS1_k127_2967079_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 354.0
PJS1_k127_2967079_5 PFAM Spermine synthase K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 340.0
PJS1_k127_2967079_6 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 330.0
PJS1_k127_2967079_7 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 289.0
PJS1_k127_2967079_8 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003442 250.0
PJS1_k127_2967079_9 periplasmic protein - - - 0.00000000000000000000000000000000000000000000000000000000000003454 222.0
PJS1_k127_2979984_0 Methyltransferase type 11 K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 597.0
PJS1_k127_2979984_1 PFAM Carbon starvation protein CstA K06200 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003506 503.0
PJS1_k127_2979984_10 cytochrome C, class I - - - 0.0000001273 55.0
PJS1_k127_2979984_2 Protein of unknown function (DUF3641) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 482.0
PJS1_k127_2979984_3 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 319.0
PJS1_k127_2979984_4 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 290.0
PJS1_k127_2979984_5 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000668 261.0
PJS1_k127_2979984_6 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001739 252.0
PJS1_k127_2979984_7 Rhodanese Homology Domain K03972 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005623,GO:0016740,GO:0016782,GO:0016783,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.000000000000000000000000006816 117.0
PJS1_k127_2979984_8 PFAM extracellular solute-binding protein family 1 K02040 - - 0.00000000000000000000000002295 119.0
PJS1_k127_2979984_9 Rhodanese Homology Domain K03972 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005623,GO:0016740,GO:0016782,GO:0016783,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.000000000000000000000000359 115.0
PJS1_k127_3109993_0 FtsJ-like methyltransferase K06968 - 2.1.1.186 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000068 559.0
PJS1_k127_3109993_1 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 515.0
PJS1_k127_3109993_2 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 350.0
PJS1_k127_3148556_0 PFAM type II secretion system protein E K02669,K12203 - - 1.565e-194 624.0
PJS1_k127_3148556_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009178 602.0
PJS1_k127_3148556_10 PFAM type II secretion system protein E K02669,K12203 - - 0.00000000005285 63.0
PJS1_k127_3148556_11 Evidence 4 Homologs of previously reported genes of - - - 0.0001193 46.0
PJS1_k127_3148556_2 PFAM Metal-dependent phosphohydrolase, HD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003717 506.0
PJS1_k127_3148556_3 VanZ like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 451.0
PJS1_k127_3148556_4 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006316 376.0
PJS1_k127_3148556_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 324.0
PJS1_k127_3148556_6 YGGT family K02221 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001055 255.0
PJS1_k127_3148556_7 Ferredoxin - - - 0.00000000000000000000000000000000000000000000001444 173.0
PJS1_k127_3148556_8 DUF167 K09131 - - 0.00000000000000000000000000000000000000000004809 162.0
PJS1_k127_3148556_9 Methyltransferase, chemotaxis proteins K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000001734 124.0
PJS1_k127_3160767_0 Succinyl-CoA ligase like flavodoxin domain - - - 0.0 1198.0
PJS1_k127_3160767_1 Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 1.086e-317 982.0
PJS1_k127_3160767_10 oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000007185 124.0
PJS1_k127_3160767_2 ATP citrate lyase citrate-binding - - - 4e-208 653.0
PJS1_k127_3160767_3 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 492.0
PJS1_k127_3160767_4 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 459.0
PJS1_k127_3160767_5 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 428.0
PJS1_k127_3160767_6 4Fe-4S dicluster domain K16950 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 434.0
PJS1_k127_3160767_7 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 419.0
PJS1_k127_3160767_8 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000001271 258.0
PJS1_k127_3160767_9 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000005408 235.0
PJS1_k127_3221628_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 6.702e-279 861.0
PJS1_k127_3221628_1 AsmA family K07289 - - 1.739e-258 817.0
PJS1_k127_3221628_10 - - - - 0.0000000000000000000000001969 115.0
PJS1_k127_3221628_11 PFAM cytochrome oxidase maturation protein cbb3-type - - - 0.00000000000000001271 89.0
PJS1_k127_3221628_12 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.00000008052 64.0
PJS1_k127_3221628_13 Hemerythrin-like metal-binding protein K07216 - - 0.000003411 54.0
PJS1_k127_3221628_2 endonuclease III K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004372 593.0
PJS1_k127_3221628_3 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 405.0
PJS1_k127_3221628_4 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 365.0
PJS1_k127_3221628_5 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008354 354.0
PJS1_k127_3221628_6 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 350.0
PJS1_k127_3221628_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006301 297.0
PJS1_k127_3221628_8 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000001653 203.0
PJS1_k127_3221628_9 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 - 3.6.3.4 0.00000000000000000000000000000000000000000000000000008262 187.0
PJS1_k127_3225982_0 peptidase M24B X-Pro dipeptidase aminopeptidase domain protein K01262 - 3.4.11.9 8.494e-225 706.0
PJS1_k127_3225982_1 Involved in the biosynthesis of porphyrin-containing compound - - - 9.746e-207 648.0
PJS1_k127_3225982_2 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 465.0
PJS1_k127_3225982_3 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 394.0
PJS1_k127_3225982_4 Nucleotidyl transferase K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007616 338.0
PJS1_k127_3225982_5 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008995 324.0
PJS1_k127_3225982_6 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000002543 235.0
PJS1_k127_3225982_7 ThiS family K03154 - - 0.000000000000000000001456 97.0
PJS1_k127_3291312_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1565.0
PJS1_k127_3291312_1 AcrB/AcrD/AcrF family - - - 0.0 1487.0
PJS1_k127_3291312_10 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 374.0
PJS1_k127_3291312_11 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 363.0
PJS1_k127_3291312_12 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 346.0
PJS1_k127_3291312_13 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005204 330.0
PJS1_k127_3291312_14 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 - 3.1.3.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 321.0
PJS1_k127_3291312_15 Belongs to the ribF family K11753 GO:0003674,GO:0003824,GO:0003919,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008531,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0044237,GO:0070566 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000001479 272.0
PJS1_k127_3291312_16 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000002302 183.0
PJS1_k127_3291312_17 transcriptional regulator - - - 0.00000000000000000000000000000000000000005546 159.0
PJS1_k127_3291312_18 Protein of unknown function (DUF454) K09790 - - 0.00000000000000000000000000000000000005326 150.0
PJS1_k127_3291312_2 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0 1123.0
PJS1_k127_3291312_20 - - - - 0.00001073 53.0
PJS1_k127_3291312_22 - - - - 0.0006171 45.0
PJS1_k127_3291312_3 MacB-like periplasmic core domain K02004 - - 9.824e-198 622.0
PJS1_k127_3291312_4 MacB-like periplasmic core domain K02004 - - 1.833e-197 622.0
PJS1_k127_3291312_5 Uncharacterized protein conserved in bacteria (DUF2331) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 535.0
PJS1_k127_3291312_6 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003983 517.0
PJS1_k127_3291312_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 499.0
PJS1_k127_3291312_8 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 450.0
PJS1_k127_3291312_9 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004102 400.0
PJS1_k127_3292199_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 6e-258 804.0
PJS1_k127_3292199_1 acid) synthase K01654 - 2.5.1.56 1.372e-243 760.0
PJS1_k127_3292199_10 COGs COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00978 - 2.7.7.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008194 359.0
PJS1_k127_3292199_11 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 301.0
PJS1_k127_3292199_12 PFAM Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 289.0
PJS1_k127_3292199_13 Flagellar hook-length control protein FliK - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 292.0
PJS1_k127_3292199_14 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 286.0
PJS1_k127_3292199_15 TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 282.0
PJS1_k127_3292199_16 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000611 260.0
PJS1_k127_3292199_17 Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility - - - 0.00000000000000000000000000000000000000000000000000000000001248 215.0
PJS1_k127_3292199_18 NusG domain II - - - 0.0000000000000000000000000000000000000000000000000000000003982 203.0
PJS1_k127_3292199_19 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.000000000000000000000000000000000000000000000000000000001034 215.0
PJS1_k127_3292199_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 3.079e-205 648.0
PJS1_k127_3292199_20 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.000000000000000000000000000000000000000000000000000000002891 207.0
PJS1_k127_3292199_21 Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility - - - 0.0000000000000000000000000000000000000000000000000000002427 203.0
PJS1_k127_3292199_22 Flagellar protein FliS K02422 - - 0.000000000000000000000000000000000000000000000000009342 184.0
PJS1_k127_3292199_23 PFAM sigma 54 modulation protein ribosomal protein S30EA K05808 - - 0.0000000000000000000000000000000000000000000000002573 177.0
PJS1_k127_3292199_24 FlhB HrpN YscU SpaS Family K04061 - - 0.0000000000000000000000000000000004786 135.0
PJS1_k127_3292199_25 Flagellar protein FliT K02423 - - 0.0000000000000000000000000001887 117.0
PJS1_k127_3292199_26 FlaG protein K06603 - - 0.00000000000001537 78.0
PJS1_k127_3292199_3 Belongs to the DegT DnrJ EryC1 family K12452 - 1.17.1.1 6.193e-198 624.0
PJS1_k127_3292199_4 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 521.0
PJS1_k127_3292199_5 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004032 497.0
PJS1_k127_3292199_6 P-loop ATPase protein family K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 462.0
PJS1_k127_3292199_7 CDP-glucose 4,6-dehydratase K01709 - 4.2.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 444.0
PJS1_k127_3292199_8 ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007079 430.0
PJS1_k127_3292199_9 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 387.0
PJS1_k127_3330908_0 Histidine Phosphotransfer domain K02487,K06596 - - 0.0 1291.0
PJS1_k127_3330908_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 8.88e-304 942.0
PJS1_k127_3330908_10 THUMP K07444 - - 5.238e-213 666.0
PJS1_k127_3330908_11 Delta-aminolevulinic acid dehydratase K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 3.005e-200 626.0
PJS1_k127_3330908_12 Acetyl-coenzyme A transporter 1 K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 607.0
PJS1_k127_3330908_13 PFAM aspartate ornithine carbamoyltransferase Asp Orn-binding region K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008729 574.0
PJS1_k127_3330908_14 histidine kinase HAMP region domain protein K02660,K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 580.0
PJS1_k127_3330908_15 PFAM ABC transporter related K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 510.0
PJS1_k127_3330908_16 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 478.0
PJS1_k127_3330908_17 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007033 458.0
PJS1_k127_3330908_18 Inositol monophosphatase family K01082,K01092 - 3.1.3.25,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 413.0
PJS1_k127_3330908_19 PFAM type II secretion system protein E K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 399.0
PJS1_k127_3330908_2 PFAM TrkA-N domain protein K03499 - - 2.01e-250 778.0
PJS1_k127_3330908_20 PFAM ABC-2 type transporter K09694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 394.0
PJS1_k127_3330908_21 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 361.0
PJS1_k127_3330908_22 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008854 348.0
PJS1_k127_3330908_23 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000414 342.0
PJS1_k127_3330908_24 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005126 351.0
PJS1_k127_3330908_25 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 321.0
PJS1_k127_3330908_26 Pirin K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 316.0
PJS1_k127_3330908_27 PFAM peptidase M3A and M3B thimet oligopeptidase F K01414 - 3.4.24.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002512 267.0
PJS1_k127_3330908_28 PFAM LOR SDH bifunctional enzyme conserved region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004818 258.0
PJS1_k127_3330908_29 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000007821 237.0
PJS1_k127_3330908_3 Aminotransferase class-III K01845 - 5.4.3.8 1.324e-241 750.0
PJS1_k127_3330908_30 Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000000000000000000000000005732 230.0
PJS1_k127_3330908_31 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000004031 221.0
PJS1_k127_3330908_32 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000000000000000000000000000000000000000000000001707 221.0
PJS1_k127_3330908_33 cheY-homologous receiver domain K02657 - - 0.0000000000000000000000000000000000000000000000000000008721 195.0
PJS1_k127_3330908_34 PFAM PTS system fructose subfamily IIA component K02821 - 2.7.1.194 0.000000000000000000000000000000000000000000000000000002339 193.0
PJS1_k127_3330908_35 Two component signalling adaptor domain K02659 - - 0.0000000000000000000000000000000000000000000007287 178.0
PJS1_k127_3330908_36 PTS HPr component phosphorylation site K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000005823 139.0
PJS1_k127_3330908_37 Tautomerase enzyme K01821 - 5.3.2.6 0.0000000000000000000000000001942 115.0
PJS1_k127_3330908_38 Belongs to the UPF0149 family K07039 - - 0.00005218 57.0
PJS1_k127_3330908_4 Glutamate-cysteine ligase K01919 - 6.3.2.2 3.113e-239 745.0
PJS1_k127_3330908_5 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 3.839e-238 741.0
PJS1_k127_3330908_6 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 5.463e-236 744.0
PJS1_k127_3330908_7 Amidohydrolase family K01465 - 3.5.2.3 8.733e-223 710.0
PJS1_k127_3330908_8 repeat-containing protein - - - 8.703e-219 705.0
PJS1_k127_3330908_9 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 1.732e-216 676.0
PJS1_k127_3343884_0 AAA domain K16898 - 3.6.4.12 0.0 1660.0
PJS1_k127_3343884_1 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 2.559e-233 726.0
PJS1_k127_3343884_10 - - - - 0.0000000000000000000000000000000002704 134.0
PJS1_k127_3343884_11 - - - - 0.000000000000888 70.0
PJS1_k127_3343884_2 Protein conserved in bacteria - - - 2.129e-200 644.0
PJS1_k127_3343884_3 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006181 511.0
PJS1_k127_3343884_4 metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000904 497.0
PJS1_k127_3343884_5 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K03601,K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044237,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1,3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 383.0
PJS1_k127_3343884_6 Inhibitor of apoptosis-promoting Bax1 K19416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 361.0
PJS1_k127_3343884_7 SMART ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 340.0
PJS1_k127_3343884_8 response regulator K02485 - - 0.00000000000000000000000000000000000000000000000000000000000000000006657 241.0
PJS1_k127_3343884_9 Protein of unknown function (DUF1318) K09978 - - 0.000000000000000000000000000000000000000000000000000002945 193.0
PJS1_k127_338955_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 391.0
PJS1_k127_338955_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001791 277.0
PJS1_k127_338955_2 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000000003626 189.0
PJS1_k127_338955_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000000002566 181.0
PJS1_k127_338955_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000000003219 148.0
PJS1_k127_338955_5 ATP synthase I chain K02116 - - 0.0000000000000005399 82.0
PJS1_k127_338955_6 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.000000784 53.0
PJS1_k127_3449586_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1490.0
PJS1_k127_3449586_1 PFAM FAD linked oxidase domain protein K00102 - 1.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 521.0
PJS1_k127_3449586_10 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 304.0
PJS1_k127_3449586_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 510.0
PJS1_k127_3449586_3 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 505.0
PJS1_k127_3449586_4 Oxidoreductase FAD-binding domain protein K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 474.0
PJS1_k127_3449586_5 lytic transglycosylase activity K08306,K08308,K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009279,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0019867,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031224,GO:0031225,GO:0031975,GO:0033554,GO:0034599,GO:0042221,GO:0042597,GO:0043170,GO:0044425,GO:0044462,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0061783,GO:0070887,GO:0071236,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007081 442.0
PJS1_k127_3449586_6 HemY protein N-terminus K02498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 441.0
PJS1_k127_3449586_7 HemX, putative uroporphyrinogen-III C-methyltransferase K02496,K13543 - 2.1.1.107,4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 423.0
PJS1_k127_3449586_8 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005437 401.0
PJS1_k127_3449586_9 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 314.0
PJS1_k127_3807629_0 PFAM peptidase M3A and M3B thimet oligopeptidase F K01414 - 3.4.24.70 1.347e-302 932.0
PJS1_k127_3807629_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 4.272e-270 841.0
PJS1_k127_3807629_10 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 434.0
PJS1_k127_3807629_11 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006583 416.0
PJS1_k127_3807629_12 Phosphoesterase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008317 377.0
PJS1_k127_3807629_13 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007728 372.0
PJS1_k127_3807629_14 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 355.0
PJS1_k127_3807629_15 TIGRFAM cell division ATP-binding protein FtsE K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 352.0
PJS1_k127_3807629_16 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000216 272.0
PJS1_k127_3807629_17 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000000000000000000000000000002587 264.0
PJS1_k127_3807629_18 Domain of unknown function (DUF3369) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009712 261.0
PJS1_k127_3807629_19 - - - - 0.0000000000000000000000000000000000000000000000000001499 194.0
PJS1_k127_3807629_2 Carbon starvation protein CstA K06200 - - 7.87e-261 809.0
PJS1_k127_3807629_20 Pfam Glutaredoxin - - - 0.00000000000000000000000000000000000000000000006466 177.0
PJS1_k127_3807629_21 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000001393 168.0
PJS1_k127_3807629_22 KTSC domain - - - 0.0000000000000000000000000000000000000002946 162.0
PJS1_k127_3807629_23 Ribosomal protein L31 K02909 - - 0.0000000000000000000000000000000037 129.0
PJS1_k127_3807629_24 STAS domain K20978 - - 0.000000000000000000004658 97.0
PJS1_k127_3807629_25 - - - - 0.00000000000000000004873 102.0
PJS1_k127_3807629_26 Hemerythrin HHE cation binding domain K07216 - - 0.000000000000000008678 93.0
PJS1_k127_3807629_27 Selenoprotein, putative - - - 0.0000000005662 72.0
PJS1_k127_3807629_3 aminoacyl-histidine dipeptidase K01270 - - 8.279e-234 731.0
PJS1_k127_3807629_4 Peptidase family M48 - - - 1.897e-219 690.0
PJS1_k127_3807629_5 Belongs to the peptidase M16 family K07263 - - 5.527e-219 686.0
PJS1_k127_3807629_6 ABC-type uncharacterized transport system - - - 9.031e-205 645.0
PJS1_k127_3807629_7 PFAM peptidase M16 domain protein K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006965 504.0
PJS1_k127_3807629_8 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 522.0
PJS1_k127_3807629_9 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 441.0
PJS1_k127_3864041_0 MgtE intracellular N domain K06213 - - 1.379e-234 733.0
PJS1_k127_3864041_1 SMART PAS domain containing protein - - - 6.966e-233 763.0
PJS1_k127_3864041_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 1.882e-214 672.0
PJS1_k127_3864041_3 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005638 377.0
PJS1_k127_3864041_4 Polynucleotide kinase 3 phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004819 291.0
PJS1_k127_3864041_5 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 289.0
PJS1_k127_3864041_6 Frataxin-like domain K06202 - - 0.00000000000000000000000000000000000000000008101 161.0
PJS1_k127_3864041_7 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000001592 147.0
PJS1_k127_3864041_8 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000002083 115.0
PJS1_k127_3918247_0 PFAM CoA-binding domain protein K09181 - - 0.0 1429.0
PJS1_k127_3918247_1 PFAM sodium calcium exchanger membrane region K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009858 512.0
PJS1_k127_3918247_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000994 344.0
PJS1_k127_3918247_3 metal ion transport K14445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 348.0
PJS1_k127_3918247_4 response to cobalt ion - - - 0.000000000000000000000000000000000000000000000001741 179.0
PJS1_k127_3918247_5 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.0000000000000000000000000000000006341 134.0
PJS1_k127_3918247_6 Enoyl-CoA hydratase isomerase K19640 - - 0.000000006681 57.0
PJS1_k127_3918247_7 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11103 - - 0.000005492 49.0
PJS1_k127_4010750_0 Vitamin B12 dependent methionine synthase activation region K00548 - 2.1.1.13 0.0 1582.0
PJS1_k127_4010750_1 PFAM cytochrome c oxidase subunit I K00404 - 1.9.3.1 3.28e-280 864.0
PJS1_k127_4010750_2 Anthranilate synthase component I domain protein K01665,K13950 - 2.6.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 599.0
PJS1_k127_4010750_3 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 526.0
PJS1_k127_4010750_4 TIGRFAM cytochrome c oxidase, cbb3-type, subunit II K00405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 329.0
PJS1_k127_4010750_5 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 298.0
PJS1_k127_4010750_6 PFAM OmpW family protein K07275 - - 0.0000000000000000000000000000000000000000000000000004014 193.0
PJS1_k127_4010750_7 Cbb3-type cytochrome oxidase K00407 - - 0.0000000001173 63.0
PJS1_k127_4020571_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1343.0
PJS1_k127_4020571_1 dehydrogenase, E1 component K00164 - 1.2.4.2 0.0 1159.0
PJS1_k127_4020571_10 SurA N-terminal domain K03770 - 5.2.1.8 1.744e-235 743.0
PJS1_k127_4020571_11 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 GO:0003674,GO:0003824,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019491,GO:0019752,GO:0032787,GO:0042399,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.6.1.76 9.348e-222 693.0
PJS1_k127_4020571_12 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 1.346e-202 640.0
PJS1_k127_4020571_13 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 597.0
PJS1_k127_4020571_14 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 564.0
PJS1_k127_4020571_15 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 505.0
PJS1_k127_4020571_16 PFAM Alcohol dehydrogenase GroES domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 495.0
PJS1_k127_4020571_17 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 493.0
PJS1_k127_4020571_18 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 492.0
PJS1_k127_4020571_19 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0022900,GO:0022904,GO:0044237,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071944 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 461.0
PJS1_k127_4020571_2 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.0 1140.0
PJS1_k127_4020571_20 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 448.0
PJS1_k127_4020571_21 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 423.0
PJS1_k127_4020571_22 NlpB/DapX lipoprotein K07287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 401.0
PJS1_k127_4020571_23 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 384.0
PJS1_k127_4020571_24 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 373.0
PJS1_k127_4020571_25 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003879 355.0
PJS1_k127_4020571_26 TIGRFAM cytochrome c-type biogenesis protein CcmI K02200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 347.0
PJS1_k127_4020571_27 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007857 331.0
PJS1_k127_4020571_28 TIGRFAM periplasmic protein thiol disulphide oxidoreductase DsbE K02199 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008154 270.0
PJS1_k127_4020571_29 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000115 262.0
PJS1_k127_4020571_3 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.0 1088.0
PJS1_k127_4020571_30 PFAM ferric-uptake regulator K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002853 257.0
PJS1_k127_4020571_31 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001182 245.0
PJS1_k127_4020571_32 Bacterial protein of unknown function (DUF899) K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000001398 239.0
PJS1_k127_4020571_33 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000000000000000000000000000000000000006712 232.0
PJS1_k127_4020571_34 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000000000000000000000000000000000000007509 220.0
PJS1_k127_4020571_35 Ectoine synthase K06720 - 4.2.1.108 0.0000000000000000000000000000000000000000000000000000000000000964 214.0
PJS1_k127_4020571_36 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000000000000000000003402 217.0
PJS1_k127_4020571_37 Cytochrome C biogenesis protein K02200 - - 0.0000000000000000000000000000000000000000000000000000000000009827 213.0
PJS1_k127_4020571_38 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases K06718 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016053,GO:0016407,GO:0016740,GO:0016746,GO:0016747,GO:0018130,GO:0019491,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0042399,GO:0043170,GO:0043412,GO:0043436,GO:0043543,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.3.1.178 0.0000000000000000000000000000000000000000000000000000001549 199.0
PJS1_k127_4020571_39 TIGRFAM succinate dehydrogenase, cytochrome b556 subunit K00241 - - 0.000000000000000000000000000000000000000000000000000008536 194.0
PJS1_k127_4020571_4 TIGRFAM cytochrome c-type biogenesis protein CcmF K02198 - - 0.0 1075.0
PJS1_k127_4020571_40 - - - - 0.00000000000000000000000000000000000000001836 166.0
PJS1_k127_4020571_41 bacterial (prokaryotic) histone like domain K03530 - - 0.0000000000000000000000000000000000000003864 151.0
PJS1_k127_4020571_42 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 - - 0.00000000000000000000000000000000009123 136.0
PJS1_k127_4020571_43 FeoA K04758 - - 0.000000000000000000000000000002219 122.0
PJS1_k127_4020571_44 4Fe-4S binding domain protein - - - 0.000000000000000000000001663 105.0
PJS1_k127_4020571_45 PFAM IstB domain protein ATP-binding protein - - - 0.00000000000000000000001825 102.0
PJS1_k127_4020571_46 Flavinator of succinate dehydrogenase K09159 - - 0.0000000000000000000008126 105.0
PJS1_k127_4020571_48 SlyX K03745 - - 0.00000000000000000008103 91.0
PJS1_k127_4020571_49 - - - - 0.0000000000000005695 84.0
PJS1_k127_4020571_5 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0 1011.0
PJS1_k127_4020571_50 - - - - 0.000000000000009766 79.0
PJS1_k127_4020571_52 - - - - 0.0000026 52.0
PJS1_k127_4020571_6 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 4.627e-271 841.0
PJS1_k127_4020571_7 - - - - 3.767e-241 749.0
PJS1_k127_4020571_8 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.143e-238 743.0
PJS1_k127_4020571_9 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 5.361e-236 734.0
PJS1_k127_4025142_0 Metal-dependent hydrolase HDOD - - - 6.419e-260 822.0
PJS1_k127_4025142_1 SMART serine threonine protein kinase - - - 1.141e-232 745.0
PJS1_k127_4025142_10 PFAM Methyltransferase type 12 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062 377.0
PJS1_k127_4025142_11 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 376.0
PJS1_k127_4025142_12 TIGRFAM Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000729 364.0
PJS1_k127_4025142_13 Iron-containing redox enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009059 350.0
PJS1_k127_4025142_14 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000088 336.0
PJS1_k127_4025142_15 Bacterial dnaA protein K10763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005655 323.0
PJS1_k127_4025142_16 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 314.0
PJS1_k127_4025142_17 Phospholipase/Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 311.0
PJS1_k127_4025142_18 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 303.0
PJS1_k127_4025142_19 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 293.0
PJS1_k127_4025142_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 603.0
PJS1_k127_4025142_20 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001181 256.0
PJS1_k127_4025142_21 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000000000000002061 247.0
PJS1_k127_4025142_22 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000005798 257.0
PJS1_k127_4025142_23 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000000000000000000000005432 220.0
PJS1_k127_4025142_24 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000000000000000000000000000000000000000000000000000000000002266 224.0
PJS1_k127_4025142_25 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000005407 207.0
PJS1_k127_4025142_26 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000000719 205.0
PJS1_k127_4025142_27 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000004924 194.0
PJS1_k127_4025142_28 Thermostable hemolysin - - - 0.0000000000000000000000000000000000000000000000003986 184.0
PJS1_k127_4025142_29 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000002168 175.0
PJS1_k127_4025142_3 PFAM AIR synthase related protein domain protein K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 579.0
PJS1_k127_4025142_30 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000001129 179.0
PJS1_k127_4025142_31 - - - - 0.000000000000000000000000000000000000000008776 156.0
PJS1_k127_4025142_32 Transcriptional regulator, Crp Fnr family - - - 0.0000000000000000000000000000000000002638 149.0
PJS1_k127_4025142_33 photoreceptor activity K02482 - 2.7.13.3 0.0000000000000000000000000000003429 132.0
PJS1_k127_4025142_34 Tautomerase enzyme K01821 - 5.3.2.6 0.000000000000000000000000001916 113.0
PJS1_k127_4025142_35 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000002144 96.0
PJS1_k127_4025142_4 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 544.0
PJS1_k127_4025142_5 Winged helix-turn-helix transcription repressor, HrcA DNA-binding K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009266 512.0
PJS1_k127_4025142_6 Radical SAM superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 480.0
PJS1_k127_4025142_7 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 466.0
PJS1_k127_4025142_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007874 439.0
PJS1_k127_4025142_9 TIGRFAM HAD-superfamily subfamily IB hydrolase, TIGR01490 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 398.0
PJS1_k127_4129440_0 GAF domain - - - 8.558e-295 939.0
PJS1_k127_4129440_1 Membrane-associated sensor, integral membrane domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 355.0
PJS1_k127_4129440_2 His Kinase A (phosphoacceptor) domain - - - 0.0005679 45.0
PJS1_k127_4225381_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 5.212e-274 849.0
PJS1_k127_4225381_1 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 2.471e-249 773.0
PJS1_k127_4225381_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 1.703e-237 741.0
PJS1_k127_4225381_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 474.0
PJS1_k127_4225381_4 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 480.0
PJS1_k127_4225381_5 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 335.0
PJS1_k127_4225381_6 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000008786 175.0
PJS1_k127_4225381_7 - - - - 0.0001477 46.0
PJS1_k127_4315594_0 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 3.781e-264 820.0
PJS1_k127_4315594_1 Outer membrane efflux protein K18139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007621 400.0
PJS1_k127_4315594_10 Cytochrome C biogenesis protein K02200 - - 0.00002196 55.0
PJS1_k127_4315594_2 Domain of unknown function (DUF1956) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002528 279.0
PJS1_k127_4315594_3 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000002784 146.0
PJS1_k127_4315594_4 cell redox homeostasis K03671 - - 0.000000000000000000000000000271 121.0
PJS1_k127_4315594_5 Redoxin family - - - 0.0000000000000000000000000165 115.0
PJS1_k127_4315594_6 Copper chaperone PCu(A)C K09796 - - 0.000000000000000000001255 101.0
PJS1_k127_4315594_7 periplasmic protein thiol disulfide oxidoreductases, DsbE subfamily K02199 - - 0.00000000000000000001379 98.0
PJS1_k127_4315594_8 - - - - 0.0000000000000001961 90.0
PJS1_k127_4315594_9 PFAM Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000003075 79.0
PJS1_k127_4323356_0 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 6.542e-274 855.0
PJS1_k127_4323356_1 Periplasmic binding protein domain - - - 3.006e-205 651.0
PJS1_k127_4323356_2 PFAM ATPase associated with various cellular activities AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 477.0
PJS1_k127_4323356_3 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 432.0
PJS1_k127_4323356_4 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007289 268.0
PJS1_k127_4340338_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1710.0
PJS1_k127_4340338_1 PFAM Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase K00575,K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 593.0
PJS1_k127_4340338_10 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000008602 181.0
PJS1_k127_4340338_11 PAS domain K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000003043 98.0
PJS1_k127_4340338_12 Sulfate permease family K03321 - - 0.0000000000000002121 80.0
PJS1_k127_4340338_2 cytochrome oxidase assembly K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006241 534.0
PJS1_k127_4340338_3 Phage integrase, N-terminal SAM-like domain K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007552 475.0
PJS1_k127_4340338_4 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 441.0
PJS1_k127_4340338_5 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 389.0
PJS1_k127_4340338_6 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 319.0
PJS1_k127_4340338_7 TIGRFAM DNA-3-methyladenine glycosylase I K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003441 308.0
PJS1_k127_4340338_8 Methyltransferase, chemotaxis proteins K00575,K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006598 295.0
PJS1_k127_4340338_9 SMART CoA-binding domain protein K06929 - - 0.00000000000000000000000000000000000000000000000000000000003922 209.0
PJS1_k127_4353924_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1110.0
PJS1_k127_4353924_1 Belongs to the flagella basal body rod proteins family K02396 - - 3.13e-253 796.0
PJS1_k127_4353924_10 Belongs to the flagella basal body rod proteins family K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 458.0
PJS1_k127_4353924_11 Bacterial flagellin N-terminal helical region K02397 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 462.0
PJS1_k127_4353924_12 Belongs to the flagella basal body rod proteins family K02391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 376.0
PJS1_k127_4353924_13 PFAM MotA TolQ ExbB proton channel K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 371.0
PJS1_k127_4353924_14 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 371.0
PJS1_k127_4353924_15 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 363.0
PJS1_k127_4353924_16 TIGRFAM flagellar rod assembly protein muramidase FlgJ K02395 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 349.0
PJS1_k127_4353924_17 Bacterial export proteins, family 1 K02421 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 338.0
PJS1_k127_4353924_18 Sigma factor PP2C-like phosphatases K20977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 347.0
PJS1_k127_4353924_19 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004221 312.0
PJS1_k127_4353924_2 PFAM H transporting two-sector ATPase alpha beta subunit central region K02412 - 3.6.3.14 1.767e-197 632.0
PJS1_k127_4353924_20 Cellulose biosynthesis protein BcsQ K04562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005619 310.0
PJS1_k127_4353924_21 CheD chemotactic sensory transduction K03411 - 3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 297.0
PJS1_k127_4353924_22 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002791 268.0
PJS1_k127_4353924_23 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005254 249.0
PJS1_k127_4353924_24 PFAM Flagellar assembly protein FliH Type III secretion system HrpE K02411 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006766 245.0
PJS1_k127_4353924_25 PFAM surface presentation of antigens (SPOA) protein K02417,K03225 - - 0.000000000000000000000000000000000000000000000000000000000000000006686 228.0
PJS1_k127_4353924_26 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.0000000000000000000000000000000000000000000000000000000000000000184 231.0
PJS1_k127_4353924_27 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000003669 222.0
PJS1_k127_4353924_28 Belongs to the flagella basal body rod proteins family K02388 - - 0.00000000000000000000000000000000000000000000000000000000000009515 214.0
PJS1_k127_4353924_29 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.00000000000000000000000000000000000000000000000000001773 190.0
PJS1_k127_4353924_3 PFAM flagellar motor switch protein FliM K02416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 570.0
PJS1_k127_4353924_30 The M ring may be actively involved in energy transduction K02409 - - 0.0000000000000000000000000000000000000000000000004003 181.0
PJS1_k127_4353924_31 COG2202 FOG PAS PAC domain K03776 - - 0.0000000000000000000000000000000000000000000007755 190.0
PJS1_k127_4353924_32 Flagellar hook-length control protein FliK K02414 - - 0.0000000000000000000000000000000000000000001788 173.0
PJS1_k127_4353924_33 Flagellar FliJ protein K02413 - - 0.000000000000000000000000000000000000000000297 163.0
PJS1_k127_4353924_34 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000000001101 164.0
PJS1_k127_4353924_35 Bacterial export proteins, family 3 K02420 - - 0.0000000000000000000000000000000000000005579 149.0
PJS1_k127_4353924_36 FlgN protein K02399 - - 0.00000000000000000000000000000000001642 140.0
PJS1_k127_4353924_37 Flagellar biosynthesis protein, FliO K02418 - - 0.0000000000000000000000000000000001265 138.0
PJS1_k127_4353924_38 STAS domain K20978 - - 0.000000000000000000000617 101.0
PJS1_k127_4353924_39 PFAM Anti-sigma-28 factor FlgM family protein K02398 - - 0.000000000000000000009633 98.0
PJS1_k127_4353924_4 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 569.0
PJS1_k127_4353924_5 PFAM flagellar basal body FlaE domain protein K02390 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 570.0
PJS1_k127_4353924_6 TIGRFAM flagellar motor switch protein FliG K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 553.0
PJS1_k127_4353924_7 PFAM GTP-binding signal recognition particle SRP54 G- domain K02404 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 533.0
PJS1_k127_4353924_8 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 517.0
PJS1_k127_4353924_9 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 508.0
PJS1_k127_4473208_0 Domain of unknown function (DUF3400) - - - 0.0 2154.0
PJS1_k127_4473208_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1095.0
PJS1_k127_4473208_10 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003278 326.0
PJS1_k127_4473208_11 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006776 321.0
PJS1_k127_4473208_12 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005883 295.0
PJS1_k127_4473208_13 PFAM YaeQ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007075 258.0
PJS1_k127_4473208_14 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000007189 237.0
PJS1_k127_4473208_15 ThiF family K22132 - - 0.0000000000000000000000000000000000000000000000000000000000000000001031 242.0
PJS1_k127_4473208_16 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000000000000000000000000000000005148 212.0
PJS1_k127_4473208_17 Belongs to the UPF0225 family K09858 - - 0.000000000000000000000000000000000000000000002295 173.0
PJS1_k127_4473208_18 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000000007172 119.0
PJS1_k127_4473208_2 NADH flavin oxidoreductase NADH oxidase K10680 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005785 585.0
PJS1_k127_4473208_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007726 506.0
PJS1_k127_4473208_4 Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 491.0
PJS1_k127_4473208_5 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 445.0
PJS1_k127_4473208_6 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 440.0
PJS1_k127_4473208_7 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 414.0
PJS1_k127_4473208_8 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004061 376.0
PJS1_k127_4473208_9 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 368.0
PJS1_k127_4547314_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 1.37e-309 950.0
PJS1_k127_4547314_1 fad dependent oxidoreductase K07137 - - 6.011e-284 879.0
PJS1_k127_4547314_10 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 387.0
PJS1_k127_4547314_11 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 382.0
PJS1_k127_4547314_12 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 373.0
PJS1_k127_4547314_13 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 358.0
PJS1_k127_4547314_14 Phage integrase, N-terminal SAM-like domain K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 335.0
PJS1_k127_4547314_15 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004935 259.0
PJS1_k127_4547314_16 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000000000000000000000344 213.0
PJS1_k127_4547314_17 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000002819 205.0
PJS1_k127_4547314_18 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000000000000000000007831 143.0
PJS1_k127_4547314_19 - - - - 0.00000000000000000000000001055 113.0
PJS1_k127_4547314_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 3.618e-269 834.0
PJS1_k127_4547314_20 PFAM Integrase catalytic - - - 0.00000000000003682 72.0
PJS1_k127_4547314_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 7.65e-249 773.0
PJS1_k127_4547314_4 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 1.51e-229 716.0
PJS1_k127_4547314_5 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 471.0
PJS1_k127_4547314_6 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 441.0
PJS1_k127_4547314_7 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 443.0
PJS1_k127_4547314_8 Bacterial lipid A biosynthesis acyltransferase K02517,K12974 - 2.3.1.241,2.3.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 404.0
PJS1_k127_4547314_9 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 398.0
PJS1_k127_462003_0 LysR substrate binding domain K13634 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 489.0
PJS1_k127_462003_1 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006673 425.0
PJS1_k127_462003_2 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 300.0
PJS1_k127_462003_3 nitrite sulfite reductase hemoprotein beta-component ferrodoxin domain protein K00381,K00392 - 1.8.1.2,1.8.7.1 0.00000000000000000000000000000000000000000000000000000002813 199.0
PJS1_k127_4638459_0 Peptidase family U32 C-terminal domain K08303 - - 2.193e-261 809.0
PJS1_k127_4638459_1 Soluble lytic murein transglycosylase L domain K08309 - - 4.441e-251 792.0
PJS1_k127_4638459_10 LytTr DNA-binding domain K08083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005756 404.0
PJS1_k127_4638459_11 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009852 385.0
PJS1_k127_4638459_12 Prokaryotic cytochrome b561 K12262 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001901 280.0
PJS1_k127_4638459_13 Domain of unknown function (DUF386) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002707 237.0
PJS1_k127_4638459_14 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000001088 164.0
PJS1_k127_4638459_2 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 1.926e-249 780.0
PJS1_k127_4638459_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 7.222e-238 743.0
PJS1_k127_4638459_4 PFAM peptidase S13 D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 7.563e-208 655.0
PJS1_k127_4638459_5 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 585.0
PJS1_k127_4638459_6 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 502.0
PJS1_k127_4638459_7 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 415.0
PJS1_k127_4638459_8 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009372 391.0
PJS1_k127_4638459_9 KR domain K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 390.0
PJS1_k127_4722735_0 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.0 1296.0
PJS1_k127_4722735_1 Putative diguanylate phosphodiesterase - - - 0.0 1161.0
PJS1_k127_4722735_2 ATPase MipZ K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 365.0
PJS1_k127_4722735_3 MlaA lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 302.0
PJS1_k127_4722735_4 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000000000000000001157 196.0
PJS1_k127_4722735_5 AAA domain K16898 - 3.6.4.12 0.00000000000000000001162 96.0
PJS1_k127_4722735_6 - - - - 0.0000000000007527 71.0
PJS1_k127_4737625_0 Amino acid permease K03294 - - 3.197e-219 688.0
PJS1_k127_4737625_1 Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family K03455 - - 4.209e-208 660.0
PJS1_k127_4737625_10 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002031 269.0
PJS1_k127_4737625_11 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001123 247.0
PJS1_k127_4737625_12 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000001314 134.0
PJS1_k127_4737625_13 Hemerythrin-like metal-binding protein - - - 0.00000000000000000008395 95.0
PJS1_k127_4737625_14 PFAM Hemerythrin HHE cation binding domain protein K07216 - - 0.0000000002327 69.0
PJS1_k127_4737625_15 Pfam Mechanosensitive ion channel - - - 0.000000001629 67.0
PJS1_k127_4737625_2 Glycosyl transferase, family 2 K21349 - 2.4.1.268 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 529.0
PJS1_k127_4737625_3 hydroxypyruvate reductase K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 544.0
PJS1_k127_4737625_4 COG0463 Glycosyltransferases involved in cell wall biogenesis K13693 - 2.4.1.266 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 515.0
PJS1_k127_4737625_5 Na Pi-cotransporter K03324 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 464.0
PJS1_k127_4737625_6 Phospholipase A1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 408.0
PJS1_k127_4737625_7 mechanosensitive ion channel K22044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 378.0
PJS1_k127_4737625_8 2Fe-2S iron-sulfur cluster binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 346.0
PJS1_k127_4737625_9 response regulator receiver K07688,K07690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004528 266.0
PJS1_k127_4739303_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 8.663e-318 983.0
PJS1_k127_4739303_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 1.563e-290 901.0
PJS1_k127_4739303_10 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 373.0
PJS1_k127_4739303_11 glycerophosphodiester phosphodiesterase activity K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 360.0
PJS1_k127_4739303_12 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 354.0
PJS1_k127_4739303_13 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 306.0
PJS1_k127_4739303_14 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 281.0
PJS1_k127_4739303_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006961 282.0
PJS1_k127_4739303_16 OsmC-like protein K07397 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009573 261.0
PJS1_k127_4739303_17 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000000000001451 234.0
PJS1_k127_4739303_18 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000000000000000000000005087 226.0
PJS1_k127_4739303_19 Required for insertion of 4Fe-4S clusters K15724 - - 0.000000000000000000000000000000000000000000000000000000000002794 210.0
PJS1_k127_4739303_2 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 3.608e-223 707.0
PJS1_k127_4739303_20 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000000000000000000000001252 205.0
PJS1_k127_4739303_21 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000000000001211 132.0
PJS1_k127_4739303_22 - - - - 0.0000000000000000005213 87.0
PJS1_k127_4739303_23 elongation factor Tu K02358 - - 0.000000000000000001409 85.0
PJS1_k127_4739303_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 8.35e-220 686.0
PJS1_k127_4739303_4 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 6.517e-205 646.0
PJS1_k127_4739303_5 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 9.899e-196 613.0
PJS1_k127_4739303_6 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 612.0
PJS1_k127_4739303_7 Alpha/beta hydrolase family K03928 - 3.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 537.0
PJS1_k127_4739303_8 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 513.0
PJS1_k127_4739303_9 Indole-3-glycerol phosphate synthase K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 392.0
PJS1_k127_4782233_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 3.455e-310 957.0
PJS1_k127_4782233_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 3.074e-229 714.0
PJS1_k127_4782233_2 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 5.774e-229 717.0
PJS1_k127_4782233_3 Sugar (and other) transporter - - - 6.12e-208 655.0
PJS1_k127_4782233_4 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 300.0
PJS1_k127_4782233_5 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000001013 241.0
PJS1_k127_4782233_6 Protein of unknown function (DUF615) K09889 - - 0.00000000000000000000000000000000000000000000000000000000000000001052 228.0
PJS1_k127_4782233_7 Hemerythrin-like metal-binding protein - - - 0.0000000000000000001779 94.0
PJS1_k127_4782233_8 Cytochrome c, class I - - - 0.0000000000000000002031 91.0
PJS1_k127_4784585_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1494.0
PJS1_k127_4784585_1 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K02021,K11085 - - 1.868e-277 863.0
PJS1_k127_4784585_10 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002673 269.0
PJS1_k127_4784585_11 cytochrome oxidase assembly K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002316 250.0
PJS1_k127_4784585_12 Protein of unknown function (DUF456) K09793 - - 0.0000000000000000000000000000000000000000000008743 170.0
PJS1_k127_4784585_13 Cell division protein ZapA K09888 - - 0.00000000000000000000000000000000000000005486 156.0
PJS1_k127_4784585_14 - - - - 0.00000000000000000000000000000000000000006724 157.0
PJS1_k127_4784585_15 Ribosomal silencing factor during starvation K09710 - - 0.00000000000000003301 86.0
PJS1_k127_4784585_16 - - - - 0.00000000000003338 78.0
PJS1_k127_4784585_2 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 3.055e-271 859.0
PJS1_k127_4784585_3 AAA domain K02232 - 6.3.5.10 7.442e-216 681.0
PJS1_k127_4784585_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 566.0
PJS1_k127_4784585_5 receptor K02014,K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 449.0
PJS1_k127_4784585_6 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007132 352.0
PJS1_k127_4784585_7 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005614 279.0
PJS1_k127_4784585_8 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001364 276.0
PJS1_k127_4784585_9 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001053 286.0
PJS1_k127_488419_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 6.345e-281 868.0
PJS1_k127_488419_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 9.205e-271 836.0
PJS1_k127_488419_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.101e-262 815.0
PJS1_k127_488419_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 293.0
PJS1_k127_488419_4 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005562 270.0
PJS1_k127_488419_5 RTX toxin acyltransferase family K07389 - - 0.0000000000000000000000000000000000000000000000000000000000000000002494 233.0
PJS1_k127_488419_6 Belongs to the P(II) protein family K04751,K04752 - - 0.000000000000000000000000000000000000000000000000000000003809 201.0
PJS1_k127_488419_7 - - - - 0.0000000239 55.0
PJS1_k127_488419_8 - - - - 0.00000003778 56.0
PJS1_k127_4924172_0 Homoserine dehydrogenase K00003 - 1.1.1.3 8.537e-251 779.0
PJS1_k127_4924172_1 PFAM aminotransferase class I and II K14260 - 2.6.1.2,2.6.1.66 1.293e-246 763.0
PJS1_k127_4924172_2 Threonine synthase K01733 - 4.2.3.1 3.432e-235 734.0
PJS1_k127_4924172_3 ZIP Zinc transporter K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003033 273.0
PJS1_k127_4924172_4 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000000000000000002161 179.0
PJS1_k127_5025536_0 Glycosyltransferase family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.0 1244.0
PJS1_k127_5025536_1 Family 4 glycosyl hydrolase K01222 - 3.2.1.86 1.297e-203 640.0
PJS1_k127_5025536_2 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 503.0
PJS1_k127_5025536_3 glutamine-fructose-6-phosphate transaminase (isomerizing) activity K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006526 479.0
PJS1_k127_5025536_4 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 404.0
PJS1_k127_5025536_5 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00847,K00852,K18478 - 2.7.1.15,2.7.1.184,2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 370.0
PJS1_k127_5025536_6 SpoIIAA-like - - - 0.00000000000000000000000000000000000000000000003856 174.0
PJS1_k127_5072137_0 serine threonine protein kinase K12132 - 2.7.11.1 0.0 1273.0
PJS1_k127_5072137_1 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0 1034.0
PJS1_k127_5072137_2 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008926 501.0
PJS1_k127_5072137_3 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 443.0
PJS1_k127_5072137_4 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 414.0
PJS1_k127_5072137_5 single-stranded DNA 5'-3' exodeoxyribonuclease activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 393.0
PJS1_k127_5072137_6 Integral membrane protein TerC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 378.0
PJS1_k127_5072137_7 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 383.0
PJS1_k127_5072137_8 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005194 345.0
PJS1_k127_5072137_9 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000002488 205.0
PJS1_k127_5136784_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1213.0
PJS1_k127_5136784_1 Belongs to the ClpA ClpB family K03694 - - 0.0 1198.0
PJS1_k127_5136784_10 Pfam:KaiC K08482 - - 2.717e-227 717.0
PJS1_k127_5136784_11 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 1.147e-224 703.0
PJS1_k127_5136784_12 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 3.153e-221 717.0
PJS1_k127_5136784_13 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 576.0
PJS1_k127_5136784_14 histidine kinase HAMP region domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004798 567.0
PJS1_k127_5136784_15 LysM domain K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007234 554.0
PJS1_k127_5136784_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 545.0
PJS1_k127_5136784_17 Type I GTP cyclohydrolase folE2 K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 468.0
PJS1_k127_5136784_18 Polyprenyl synthetase K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003402 469.0
PJS1_k127_5136784_19 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 401.0
PJS1_k127_5136784_2 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 0.0 1189.0
PJS1_k127_5136784_20 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 403.0
PJS1_k127_5136784_21 SMART heat shock protein DnaJ domain protein K05801 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 385.0
PJS1_k127_5136784_22 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 380.0
PJS1_k127_5136784_23 Histidine Phosphotransfer domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 395.0
PJS1_k127_5136784_24 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 361.0
PJS1_k127_5136784_25 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 354.0
PJS1_k127_5136784_26 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 348.0
PJS1_k127_5136784_27 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 325.0
PJS1_k127_5136784_28 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 337.0
PJS1_k127_5136784_29 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008492 307.0
PJS1_k127_5136784_3 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1023.0
PJS1_k127_5136784_30 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 301.0
PJS1_k127_5136784_31 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000664 300.0
PJS1_k127_5136784_32 Intracellular septation protein A K06190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 284.0
PJS1_k127_5136784_33 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 282.0
PJS1_k127_5136784_34 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003541 278.0
PJS1_k127_5136784_35 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002114 276.0
PJS1_k127_5136784_36 chemotaxis protein K03410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004204 251.0
PJS1_k127_5136784_37 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000000000000000000000002956 216.0
PJS1_k127_5136784_38 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000003771 217.0
PJS1_k127_5136784_39 SpoIIAA-like - - - 0.0000000000000000000000000000000000000000000000000000000001234 210.0
PJS1_k127_5136784_4 Large family of predicted nucleotide-binding domains K07175 - - 1.854e-270 837.0
PJS1_k127_5136784_40 Belongs to the MsrB Met sulfoxide reductase family K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000004914 202.0
PJS1_k127_5136784_41 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000000000000006163 168.0
PJS1_k127_5136784_42 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000001141 172.0
PJS1_k127_5136784_43 Response regulator receiver - - - 0.000000000000000000000000000000000000000000001846 170.0
PJS1_k127_5136784_44 PFAM YCII-related K09780 - - 0.000000000000000000000000000000000000000002888 156.0
PJS1_k127_5136784_45 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000002265 155.0
PJS1_k127_5136784_46 Bacterial protein of unknown function (DUF883) - - - 0.00000000000000000000000000000000000000006075 153.0
PJS1_k127_5136784_47 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000000000000000001247 149.0
PJS1_k127_5136784_48 KaiB domain K08481 - - 0.0000000000000000000000000000000000031 140.0
PJS1_k127_5136784_49 SMART Cold shock protein K03704 - - 0.00000000000000000000000000000000001318 135.0
PJS1_k127_5136784_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.497e-265 820.0
PJS1_k127_5136784_50 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000000000000000000000000000001969 135.0
PJS1_k127_5136784_51 psiF repeat - - - 0.00000000000000000000000001533 113.0
PJS1_k127_5136784_52 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000000000000000003145 113.0
PJS1_k127_5136784_53 EamA-like transporter family K15270 - - 0.00000001223 57.0
PJS1_k127_5136784_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 1.886e-257 796.0
PJS1_k127_5136784_7 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 2.695e-248 771.0
PJS1_k127_5136784_8 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 1.074e-231 723.0
PJS1_k127_5136784_9 Belongs to the ABC transporter superfamily K02031,K02032 - - 1.632e-228 748.0
PJS1_k127_5161926_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1459.0
PJS1_k127_5161926_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1429.0
PJS1_k127_5161926_10 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000708 605.0
PJS1_k127_5161926_11 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 598.0
PJS1_k127_5161926_12 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 560.0
PJS1_k127_5161926_13 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 546.0
PJS1_k127_5161926_14 glycosyl - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 541.0
PJS1_k127_5161926_15 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 567.0
PJS1_k127_5161926_16 PFAM NnrS family protein K07234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 544.0
PJS1_k127_5161926_17 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 519.0
PJS1_k127_5161926_18 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 507.0
PJS1_k127_5161926_19 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 514.0
PJS1_k127_5161926_2 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 1.133e-311 966.0
PJS1_k127_5161926_20 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 500.0
PJS1_k127_5161926_21 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 492.0
PJS1_k127_5161926_22 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000534 491.0
PJS1_k127_5161926_23 Nucleotidyl transferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 482.0
PJS1_k127_5161926_24 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 474.0
PJS1_k127_5161926_25 PFAM PEGA domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 454.0
PJS1_k127_5161926_26 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008602 443.0
PJS1_k127_5161926_27 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006395 440.0
PJS1_k127_5161926_28 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004695 435.0
PJS1_k127_5161926_29 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 424.0
PJS1_k127_5161926_3 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 2.544e-232 726.0
PJS1_k127_5161926_30 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006278 419.0
PJS1_k127_5161926_31 Transglycosylase SLT domain K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 417.0
PJS1_k127_5161926_32 Phosphorylase superfamily K00772,K03815 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 392.0
PJS1_k127_5161926_33 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 382.0
PJS1_k127_5161926_34 RadC-like JAB domain K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 372.0
PJS1_k127_5161926_35 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 331.0
PJS1_k127_5161926_36 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 329.0
PJS1_k127_5161926_37 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 283.0
PJS1_k127_5161926_38 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 282.0
PJS1_k127_5161926_39 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002024 268.0
PJS1_k127_5161926_4 Flavin containing amine oxidoreductase K21677 - 1.17.8.1 3.518e-217 683.0
PJS1_k127_5161926_40 Bacterial type II and III secretion system protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007375 278.0
PJS1_k127_5161926_41 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000137 256.0
PJS1_k127_5161926_42 Belongs to the heme-copper respiratory oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007503 256.0
PJS1_k127_5161926_43 Protein of unknown function (DUF3014) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008411 248.0
PJS1_k127_5161926_44 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000000000000000000000000000000001002 206.0
PJS1_k127_5161926_45 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000000003275 192.0
PJS1_k127_5161926_46 NlpC/P60 family K19303 - - 0.000000000000000000000000000000000000000000000000245 193.0
PJS1_k127_5161926_47 Smr domain - - - 0.0000000000000000000000000000000000000000000001996 173.0
PJS1_k127_5161926_48 Uncharacterized conserved protein (DUF2249) - - - 0.00000000000000000000000000000000000000001447 154.0
PJS1_k127_5161926_49 PFAM Class I peptide chain release factor K15034 - - 0.00000000000000000000000000000000000000005467 153.0
PJS1_k127_5161926_5 PFAM aminotransferase class I and II K14267 - 2.6.1.17 1.798e-209 657.0
PJS1_k127_5161926_50 response to cobalt ion - - - 0.0000000000000000000000000000000000000003122 156.0
PJS1_k127_5161926_51 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000001451 147.0
PJS1_k127_5161926_52 Invasion gene expression up-regulator, SirB - - - 0.00000000000000000000000000000000006873 152.0
PJS1_k127_5161926_53 Cold shock K03704 - - 0.000000000000000000000000000000003092 132.0
PJS1_k127_5161926_54 CcdB protein K19163 - - 0.00000000000000000000000000000000377 130.0
PJS1_k127_5161926_55 Trm112p-like protein K09791 - - 0.00000000000000000000000007538 107.0
PJS1_k127_5161926_56 Post-segregation antitoxin CcdA K19164 - - 0.0000000000000007507 81.0
PJS1_k127_5161926_57 - - - - 0.00000000000001354 83.0
PJS1_k127_5161926_58 sulfur carrier activity K08363 - - 0.0000000000005132 73.0
PJS1_k127_5161926_59 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.0000003775 54.0
PJS1_k127_5161926_6 PFAM deoxyribose-phosphate aldolase phospho-2-dehydro-3-deoxyheptonate aldolase K11645 - 4.1.2.13 4.636e-208 649.0
PJS1_k127_5161926_60 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00001151 53.0
PJS1_k127_5161926_61 PFAM Class I peptide chain release factor K15034 - - 0.00005332 45.0
PJS1_k127_5161926_7 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 5.993e-204 638.0
PJS1_k127_5161926_8 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 7.237e-204 640.0
PJS1_k127_5161926_9 PFAM type II secretion system protein E K02670 - - 1.597e-201 633.0
PJS1_k127_5163755_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1532.0
PJS1_k127_5163755_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 3.416e-318 982.0
PJS1_k127_5163755_10 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006377 458.0
PJS1_k127_5163755_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 470.0
PJS1_k127_5163755_12 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 453.0
PJS1_k127_5163755_13 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009284 430.0
PJS1_k127_5163755_14 PFAM glycine cleavage T protein (aminomethyl transferase) K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 424.0
PJS1_k127_5163755_15 PFAM TonB-dependent receptor plug K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 437.0
PJS1_k127_5163755_16 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 444.0
PJS1_k127_5163755_17 Periplasmic domain of Sensor histidine kinase RisS K07638 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 367.0
PJS1_k127_5163755_18 response regulator K02483,K07659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 342.0
PJS1_k127_5163755_19 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009656 347.0
PJS1_k127_5163755_2 TonB dependent receptor K02014 - - 2.183e-313 977.0
PJS1_k127_5163755_20 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 323.0
PJS1_k127_5163755_21 uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 308.0
PJS1_k127_5163755_22 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 300.0
PJS1_k127_5163755_23 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001383 285.0
PJS1_k127_5163755_24 Cytochrome C biogenesis protein transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005194 272.0
PJS1_k127_5163755_25 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005949 256.0
PJS1_k127_5163755_26 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000002326 244.0
PJS1_k127_5163755_27 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000002387 239.0
PJS1_k127_5163755_28 transport system periplasmic component K01989 - - 0.00000000000000000000000000000000000000000000000000006965 198.0
PJS1_k127_5163755_29 HDOD domain - - - 0.000000000000000000000000000000000000000000000005622 188.0
PJS1_k127_5163755_3 PFAM DEAD DEAH box helicase domain protein - GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 - 5.95e-266 830.0
PJS1_k127_5163755_30 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000003447 167.0
PJS1_k127_5163755_31 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000001551 160.0
PJS1_k127_5163755_32 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.00000000000000000000000000000000005428 135.0
PJS1_k127_5163755_33 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.0000000000000000000000000000002482 129.0
PJS1_k127_5163755_34 - - - - 0.00000000000000000002477 100.0
PJS1_k127_5163755_35 - - - - 0.00000008343 59.0
PJS1_k127_5163755_36 - - - - 0.0000002198 55.0
PJS1_k127_5163755_37 - - - - 0.000008338 49.0
PJS1_k127_5163755_38 Cytochrome C and Quinol oxidase polypeptide I - - - 0.0003438 43.0
PJS1_k127_5163755_4 Diguanylate cyclase - - - 2.585e-264 841.0
PJS1_k127_5163755_5 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 3.402e-244 762.0
PJS1_k127_5163755_6 TonB-dependent receptor K02014 - - 9.883e-223 714.0
PJS1_k127_5163755_7 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008368 602.0
PJS1_k127_5163755_8 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036 597.0
PJS1_k127_5163755_9 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007403 550.0
PJS1_k127_5240250_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 523.0
PJS1_k127_5240250_1 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003087 259.0
PJS1_k127_5240250_2 regulator of disulfide bond formation K07397 - - 0.00000000000000000000000000000000000000000000000000000000000001763 217.0
PJS1_k127_5240250_3 - - - - 0.000000000000000000000000000000000000000000000000000000000001819 218.0
PJS1_k127_5240250_4 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000000000003655 209.0
PJS1_k127_5240250_5 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000000000000000007796 174.0
PJS1_k127_5240250_6 Required for insertion of 4Fe-4S clusters K15724 - - 0.0000000000000000000000000007535 113.0
PJS1_k127_5240250_7 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.0000000000000000000000001832 107.0
PJS1_k127_5245962_0 Pyrroloquinoline quinone biosynthesis protein E - - - 3.854e-273 861.0
PJS1_k127_5245962_1 AMP binding - - - 1.12e-241 761.0
PJS1_k127_5245962_10 PFAM porin Gram-negative type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 324.0
PJS1_k127_5245962_11 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09697 - 3.6.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 310.0
PJS1_k127_5245962_12 MoaC family K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004399 270.0
PJS1_k127_5245962_13 Molybdopterin guanine dinucleotide synthesis protein B K03753 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006407 258.0
PJS1_k127_5245962_14 MoaE protein K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000005561 250.0
PJS1_k127_5245962_15 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009826 253.0
PJS1_k127_5245962_16 MobA-like NTP transferase domain K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000000278 243.0
PJS1_k127_5245962_17 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000009674 234.0
PJS1_k127_5245962_18 Branched-chain amino acid ABC transporter, substrate-binding protein K01999 - - 0.000000000000000000000000000000000000000000000000001223 198.0
PJS1_k127_5245962_19 Cytochrome c K02305 - - 0.0000000000000000000000000000000000000000000000003381 185.0
PJS1_k127_5245962_2 aerobic electron transport chain K00425,K08738 - 1.10.3.14 4.814e-215 683.0
PJS1_k127_5245962_20 TIGRFAM molybdenum cofactor synthesis K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000003851 167.0
PJS1_k127_5245962_21 Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions K02635 GO:0005575,GO:0005622,GO:0005623,GO:0009512,GO:0009579,GO:0016020,GO:0032991,GO:0034357,GO:0042651,GO:0044424,GO:0044436,GO:0044464,GO:0070069 - 0.0000000000000000000000000000000000000008032 155.0
PJS1_k127_5245962_22 antibiotic catabolic process K18235 - - 0.0000000000000000000000000000000000004795 156.0
PJS1_k127_5245962_23 deoxyhypusine monooxygenase activity K18912 - 1.14.99.50 0.0000000000000000000000000000000000007437 148.0
PJS1_k127_5245962_24 antibiotic catabolic process K18235 - - 0.00000000000000000000000000000000008556 147.0
PJS1_k127_5245962_25 Cupredoxin-like domain K00376 - 1.7.2.4 0.00000000000000000000000000000008647 143.0
PJS1_k127_5245962_26 Cytochrome c - - - 0.0000000000000000000000000003133 120.0
PJS1_k127_5245962_27 Domain of unknown function (DUF4340) - - - 0.000000000000000000000000003286 124.0
PJS1_k127_5245962_28 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.00000000000000000000000379 108.0
PJS1_k127_5245962_29 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.00000000000000000000007556 102.0
PJS1_k127_5245962_3 MoeA C-terminal region (domain IV) K03750,K07219 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 603.0
PJS1_k127_5245962_30 COG1290 Cytochrome b subunit of the bc complex K00412 - - 0.000000000000000000001765 107.0
PJS1_k127_5245962_31 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.000000000000003199 82.0
PJS1_k127_5245962_32 ThiS family K03636 - - 0.00000000004365 66.0
PJS1_k127_5245962_33 Cytochrome C - - - 0.000000004811 67.0
PJS1_k127_5245962_34 - - - - 0.00001442 49.0
PJS1_k127_5245962_35 Menaquinol-cytochrome c reductase cytochrome b c subunit K03888 - - 0.0001966 52.0
PJS1_k127_5245962_4 Polyprenyl synthetase K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 548.0
PJS1_k127_5245962_5 Molybdenum Cofactor Synthesis C K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000601 511.0
PJS1_k127_5245962_6 Flavin containing amine oxidoreductase K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 424.0
PJS1_k127_5245962_7 PFAM UBA THIF-type NAD FAD binding protein K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005198 399.0
PJS1_k127_5245962_8 ABC-type uncharacterized transport system K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 348.0
PJS1_k127_5245962_9 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 346.0
PJS1_k127_5311694_0 repeat-containing protein - - - 1.464e-268 853.0
PJS1_k127_5311694_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 509.0
PJS1_k127_5311694_2 repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009959 431.0
PJS1_k127_5311694_3 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000594 310.0
PJS1_k127_5311694_4 Polysaccharide biosynthesis protein K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000008745 182.0
PJS1_k127_5315374_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239,K00278 - 1.3.5.1,1.3.5.4,1.4.3.16 1.384e-273 850.0
PJS1_k127_5315374_1 oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 4.438e-195 615.0
PJS1_k127_5315374_2 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004962 381.0
PJS1_k127_5315374_3 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001308 259.0
PJS1_k127_5315374_4 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000003173 175.0
PJS1_k127_5315374_5 4Fe-4S binding domain K00176 - 1.2.7.3 0.000000000000000000000000000001617 122.0
PJS1_k127_5315374_6 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000001726 126.0
PJS1_k127_5332881_0 glutamate synthase, alpha subunit domain protein K00265 - 1.4.1.13,1.4.1.14 0.0 2213.0
PJS1_k127_5332881_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1051.0
PJS1_k127_5332881_10 PFAM type II and III secretion system protein K02666 - - 0.00000000000000000000000000000000000000001137 154.0
PJS1_k127_5332881_11 PFAM Cytochrome C - - - 0.0000000000000000000000000000004058 137.0
PJS1_k127_5332881_2 TIGRFAM glutamate synthase, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 3.106e-281 872.0
PJS1_k127_5332881_3 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 1.256e-208 651.0
PJS1_k127_5332881_4 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 608.0
PJS1_k127_5332881_5 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004781 577.0
PJS1_k127_5332881_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005109 326.0
PJS1_k127_5332881_7 PFAM Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009877 304.0
PJS1_k127_5332881_8 Shikimate kinase K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002144 272.0
PJS1_k127_5332881_9 4Fe-4S dicluster domain K00184 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000004583 260.0
PJS1_k127_5335335_0 Histidine kinase K02482 - 2.7.13.3 1.209e-223 710.0
PJS1_k127_5335335_1 Polysulphide reductase, NrfD - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 503.0
PJS1_k127_5335335_2 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009352 395.0
PJS1_k127_5335335_3 cytochrome - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003374 334.0
PJS1_k127_5335335_4 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 301.0
PJS1_k127_5335335_5 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000003376 230.0
PJS1_k127_5335335_6 Pfam Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000004367 203.0
PJS1_k127_5335335_7 PFAM peptidase M3A and M3B thimet oligopeptidase F K01414 - 3.4.24.70 0.00000000000000000000000000003499 117.0
PJS1_k127_5335335_8 Class III cytochrome C family - - - 0.0000005596 56.0
PJS1_k127_5412800_0 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0 2073.0
PJS1_k127_5412800_1 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000716 510.0
PJS1_k127_5412800_2 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 494.0
PJS1_k127_5412800_3 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 403.0
PJS1_k127_5412800_4 PFAM Sporulation domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001727 229.0
PJS1_k127_5412800_5 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000878 237.0
PJS1_k127_5412800_6 - - - - 0.0000000000000000000000019 105.0
PJS1_k127_5412800_7 AAA ATPase domain - - - 0.0000000000000000003826 90.0
PJS1_k127_5412800_8 - - - - 0.0001056 46.0
PJS1_k127_5684459_0 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 9.241e-273 844.0
PJS1_k127_5684459_1 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 475.0
PJS1_k127_5684459_2 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 352.0
PJS1_k127_5705632_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1890.0
PJS1_k127_5705632_1 Required for chromosome condensation and partitioning K03529 - - 0.0 1508.0
PJS1_k127_5705632_10 Urea ABC transporter, urea binding protein K11959 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 608.0
PJS1_k127_5705632_11 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005931 588.0
PJS1_k127_5705632_12 Diguanylate cyclase K13069 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 582.0
PJS1_k127_5705632_13 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 569.0
PJS1_k127_5705632_14 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 514.0
PJS1_k127_5705632_15 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772,K03815 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 484.0
PJS1_k127_5705632_16 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 472.0
PJS1_k127_5705632_17 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 451.0
PJS1_k127_5705632_18 PFAM Haloacid dehalogenase domain protein hydrolase K01079 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 447.0
PJS1_k127_5705632_19 Cytochrome C and Quinol oxidase polypeptide I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 454.0
PJS1_k127_5705632_2 Diguanylate cyclase - - - 0.0 1239.0
PJS1_k127_5705632_20 HELICc2 K03722 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 415.0
PJS1_k127_5705632_21 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 422.0
PJS1_k127_5705632_22 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 360.0
PJS1_k127_5705632_23 tRNA (guanine-N7-)-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 351.0
PJS1_k127_5705632_24 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 333.0
PJS1_k127_5705632_25 Glycoprotease family K14742 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004802 330.0
PJS1_k127_5705632_26 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 322.0
PJS1_k127_5705632_27 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 GO:0000166,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003999,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0012505,GO:0016192,GO:0016208,GO:0016740,GO:0016757,GO:0016763,GO:0017076,GO:0018130,GO:0019438,GO:0030141,GO:0030554,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0034641,GO:0034654,GO:0034774,GO:0036094,GO:0036230,GO:0042119,GO:0043094,GO:0043101,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046483,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0071704,GO:0072521,GO:0072522,GO:0097159,GO:0097367,GO:0097708,GO:0099503,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 314.0
PJS1_k127_5705632_28 Protein of unknown function (DUF520) K09767 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 284.0
PJS1_k127_5705632_29 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002293 275.0
PJS1_k127_5705632_3 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 7.113e-254 785.0
PJS1_k127_5705632_30 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000001291 264.0
PJS1_k127_5705632_31 DJ-1/PfpI family K03152 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000002706 229.0
PJS1_k127_5705632_32 PFAM cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000005621 215.0
PJS1_k127_5705632_33 signal sequence binding K07152 - - 0.0000000000000000000000000000000000000000000000000000000002135 214.0
PJS1_k127_5705632_34 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789,K14742 - 2.3.1.128 0.000000000000000000000000000000000000000000000000000001191 196.0
PJS1_k127_5705632_35 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000000000000000000000000000000000003846 187.0
PJS1_k127_5705632_36 PFAM RNA-binding S4 K04762 - - 0.00000000000000000000000000000000000000000006163 164.0
PJS1_k127_5705632_37 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00000000000000000000000000000000000000007672 165.0
PJS1_k127_5705632_38 - - - - 0.0000000000000000000000000000000000003256 147.0
PJS1_k127_5705632_39 family UPF0016 - - - 0.000000000000000000000000000000000001862 142.0
PJS1_k127_5705632_4 May be involved in recombinational repair of damaged DNA K03631 - - 3.105e-247 773.0
PJS1_k127_5705632_40 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.0000000000000000000000000000000001347 146.0
PJS1_k127_5705632_41 Pentapeptide repeats (9 copies) - - - 0.000000000000000000000000001725 119.0
PJS1_k127_5705632_42 Belongs to the radical SAM superfamily. RlmN family K06941 - 2.1.1.192 0.00002443 47.0
PJS1_k127_5705632_5 Cytochrome C and Quinol oxidase polypeptide I - - - 2.725e-212 673.0
PJS1_k127_5705632_6 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 1.461e-207 685.0
PJS1_k127_5705632_7 Cytochrome b(N-terminal)/b6/petB - - - 1.834e-202 649.0
PJS1_k127_5705632_8 Major Facilitator Superfamily - - - 9.984e-201 632.0
PJS1_k127_5705632_9 PFAM aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 6.041e-195 612.0
PJS1_k127_5804436_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1229.0
PJS1_k127_5804436_1 Flavocytochrome c sulphide dehydrogenase, flavin-binding K17229 - 1.8.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 477.0
PJS1_k127_5804436_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 317.0
PJS1_k127_5804436_3 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000001468 250.0
PJS1_k127_5804436_4 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000003137 162.0
PJS1_k127_5804436_5 Cold shock protein K03704 - - 0.000000000000000000000000000000001918 130.0
PJS1_k127_5804436_6 PFAM Cytochrome C K17230 - - 0.00000000004313 68.0
PJS1_k127_58554_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370 - 1.7.5.1 0.0 2153.0
PJS1_k127_58554_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1299.0
PJS1_k127_58554_10 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 578.0
PJS1_k127_58554_11 PFAM NnrS family protein K07234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 548.0
PJS1_k127_58554_12 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 542.0
PJS1_k127_58554_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 532.0
PJS1_k127_58554_14 COG2223 Nitrate nitrite transporter K02575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003402 516.0
PJS1_k127_58554_15 Pyruvate ferredoxin oxidoreductase and related K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 503.0
PJS1_k127_58554_16 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 464.0
PJS1_k127_58554_17 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 384.0
PJS1_k127_58554_18 PFAM UPF0103 Mediator of ErbB2-driven cell motility K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009948 382.0
PJS1_k127_58554_19 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 351.0
PJS1_k127_58554_2 copper-translocating P-type ATPase K17686 - 3.6.3.54 0.0 1032.0
PJS1_k127_58554_20 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 340.0
PJS1_k127_58554_21 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 340.0
PJS1_k127_58554_22 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 306.0
PJS1_k127_58554_23 nitrate reductase, gamma subunit K00374 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 302.0
PJS1_k127_58554_24 Reversible hydration of carbon dioxide K01673 GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0008150,GO:0008270,GO:0015976,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0046872,GO:0046914 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 299.0
PJS1_k127_58554_25 helix_turn_helix, Lux Regulon K07684 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 300.0
PJS1_k127_58554_26 PFAM AMMECR1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008183 271.0
PJS1_k127_58554_27 2Fe-2S iron-sulfur cluster binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009175 245.0
PJS1_k127_58554_28 Nitrate reductase delta subunit K00373 - - 0.000000000000000000000000000000000000000000000000000000000000000002642 233.0
PJS1_k127_58554_29 TIGRFAM transcriptional regulator, Rrf2 family K13771 - - 0.0000000000000000000000000000000000000000000000000000000002744 206.0
PJS1_k127_58554_3 Respiratory nitrate reductase beta C-terminal K00371 - 1.7.5.1 9.373e-294 906.0
PJS1_k127_58554_30 monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000004396 210.0
PJS1_k127_58554_31 - - - - 0.0000000000000000000000000000000000000000000002301 170.0
PJS1_k127_58554_32 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000000000000000000001548 142.0
PJS1_k127_58554_33 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.000000000000000000001274 94.0
PJS1_k127_58554_34 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000000003739 93.0
PJS1_k127_58554_37 Phospholipid methyltransferase - - - 0.0006973 45.0
PJS1_k127_58554_4 nitrate nitrite transporter K02575 - - 1.392e-291 900.0
PJS1_k127_58554_5 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 4.894e-268 827.0
PJS1_k127_58554_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07673 - 2.7.13.3 1.412e-229 727.0
PJS1_k127_58554_7 FAD binding domain K00239,K00278 - 1.3.5.1,1.3.5.4,1.4.3.16 2.07e-198 632.0
PJS1_k127_58554_8 Radical SAM superfamily K04069 - 1.97.1.4 3.163e-197 620.0
PJS1_k127_58554_9 HflC and HflK could encode or regulate a protease K04088 - - 7.299e-195 613.0
PJS1_k127_60155_0 aldehyde-lyase activity K01621 - 4.1.2.22,4.1.2.9 0.0 1488.0
PJS1_k127_60155_1 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 336.0
PJS1_k127_60155_2 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000001428 191.0
PJS1_k127_60155_3 PFAM Collagen triple helix repeat - - - 0.000000000000000000000000000441 127.0
PJS1_k127_60155_4 periplasmic protein - - - 0.00002472 53.0
PJS1_k127_6050207_0 PFAM sigma-54 factor interaction domain-containing protein K02667 - - 3.812e-211 668.0
PJS1_k127_6050207_1 PFAM ATP-binding region, ATPase domain protein K02668 - 2.7.13.3 9.905e-207 656.0
PJS1_k127_6050207_2 TOBE domain K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 490.0
PJS1_k127_6050207_3 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006617 353.0
PJS1_k127_6050207_4 molybdenum ABC transporter, periplasmic K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 318.0
PJS1_k127_6050207_5 N-acetylmuramoyl-L-alanine amidase (Family 2) K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000001717 231.0
PJS1_k127_6050207_6 translation initiation factor activity - - - 0.0000000000000000000000000000000004998 135.0
PJS1_k127_6050207_7 - K06950 - - 0.0000000000000006719 79.0
PJS1_k127_6067178_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 2041.0
PJS1_k127_6067178_1 pyruvate phosphate dikinase K01006,K01007 - 2.7.9.1,2.7.9.2 0.0 1699.0
PJS1_k127_6067178_10 Part of a membrane complex involved in electron transport K03617 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008134 336.0
PJS1_k127_6067178_11 Part of a membrane complex involved in electron transport K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 291.0
PJS1_k127_6067178_12 Positive regulator of sigma(E), RseC/MucC K03803 - - 0.000000000000000000000000000000000000000000000000000002553 195.0
PJS1_k127_6067178_13 Hydrogenase urease accessory protein K03192 - - 0.00000000000000000000000000000000000000000000000000065 190.0
PJS1_k127_6067178_14 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000000000000000000000000000004013 184.0
PJS1_k127_6067178_15 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.00000000000000000000000000002011 118.0
PJS1_k127_6067178_2 TIGRFAM oxaloacetate decarboxylase alpha subunit K01960 - 6.4.1.1 1.636e-305 947.0
PJS1_k127_6067178_3 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 1.542e-275 856.0
PJS1_k127_6067178_4 PFAM Carbamoyl-phosphate synthase L chain K01959 - 6.4.1.1 3.454e-275 850.0
PJS1_k127_6067178_5 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 6.404e-259 802.0
PJS1_k127_6067178_6 Aldehyde dehydrogenase family K00135,K08324 - 1.2.1.16,1.2.1.20,1.2.1.24,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 613.0
PJS1_k127_6067178_7 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 548.0
PJS1_k127_6067178_8 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 482.0
PJS1_k127_6067178_9 Hydrogenase accessory protein HypB K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 411.0
PJS1_k127_6087664_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1434.0
PJS1_k127_6087664_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1413.0
PJS1_k127_6087664_10 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 8.695e-219 685.0
PJS1_k127_6087664_11 TIGRFAM fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 2.358e-208 650.0
PJS1_k127_6087664_12 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 2.841e-198 626.0
PJS1_k127_6087664_13 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 5.755e-198 619.0
PJS1_k127_6087664_14 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 603.0
PJS1_k127_6087664_15 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 544.0
PJS1_k127_6087664_16 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 541.0
PJS1_k127_6087664_17 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 505.0
PJS1_k127_6087664_18 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 501.0
PJS1_k127_6087664_19 DNA recombination-mediator protein A K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 483.0
PJS1_k127_6087664_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1221.0
PJS1_k127_6087664_20 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 466.0
PJS1_k127_6087664_21 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 449.0
PJS1_k127_6087664_22 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 423.0
PJS1_k127_6087664_23 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 422.0
PJS1_k127_6087664_24 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 400.0
PJS1_k127_6087664_25 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 369.0
PJS1_k127_6087664_26 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008492 346.0
PJS1_k127_6087664_27 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 340.0
PJS1_k127_6087664_28 Glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 333.0
PJS1_k127_6087664_29 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 307.0
PJS1_k127_6087664_3 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0 1055.0
PJS1_k127_6087664_30 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000115 262.0
PJS1_k127_6087664_31 Male sterility protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005615 259.0
PJS1_k127_6087664_32 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001098 252.0
PJS1_k127_6087664_33 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000001391 262.0
PJS1_k127_6087664_34 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000000000000000000000000000000000000009025 235.0
PJS1_k127_6087664_35 Protein of unknown function (DUF494) K03747 - - 0.00000000000000000000000000000000000000000000000000000000000000002066 228.0
PJS1_k127_6087664_36 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000000000000000000000000000000000000003051 221.0
PJS1_k127_6087664_37 - - - - 0.00000000000000000000000000000000000000000000000001033 184.0
PJS1_k127_6087664_38 PFAM Glycosyl transferase family 2 K12990 - - 0.000000000000000000000000000000000000002742 158.0
PJS1_k127_6087664_39 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000000003202 140.0
PJS1_k127_6087664_4 histidine kinase HAMP region domain protein - - - 6.343e-320 992.0
PJS1_k127_6087664_40 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000000000000004703 139.0
PJS1_k127_6087664_42 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000000001528 82.0
PJS1_k127_6087664_43 Ribonuclease P K03536 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.0000002343 58.0
PJS1_k127_6087664_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 4.415e-305 939.0
PJS1_k127_6087664_6 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.658e-280 865.0
PJS1_k127_6087664_7 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 3.953e-250 777.0
PJS1_k127_6087664_8 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 6.215e-236 736.0
PJS1_k127_6087664_9 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 7.126e-235 738.0
PJS1_k127_6089475_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 2.173e-205 648.0
PJS1_k127_6089475_1 TIGRFAM phosphate regulon sensor kinase PhoR K07636 - 2.7.13.3 2.278e-202 638.0
PJS1_k127_6089475_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005261 378.0
PJS1_k127_6089475_3 Two component transcriptional regulator PhoB, winged helix family K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 361.0
PJS1_k127_6089475_4 Uncharacterized protein family, UPF0114 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 284.0
PJS1_k127_6089475_5 Mannose-6-phosphate isomerase K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000001356 145.0
PJS1_k127_6090401_0 SMART von Willebrand factor type A - - - 0.0 1225.0
PJS1_k127_6090401_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 7.29e-313 964.0
PJS1_k127_6090401_10 SMART ATP-binding region ATPase domain protein K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 519.0
PJS1_k127_6090401_11 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 502.0
PJS1_k127_6090401_12 PFAM ATPase associated with various cellular activities K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 487.0
PJS1_k127_6090401_13 LysR substrate binding domain K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005184 481.0
PJS1_k127_6090401_14 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 452.0
PJS1_k127_6090401_15 STAS-like domain of unknown function (DUF4325) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 445.0
PJS1_k127_6090401_16 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 359.0
PJS1_k127_6090401_17 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 322.0
PJS1_k127_6090401_18 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 284.0
PJS1_k127_6090401_19 Carbonic anhydrase K01673 GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0008150,GO:0008270,GO:0015976,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0046872,GO:0046914 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004083 277.0
PJS1_k127_6090401_2 Glutamine synthetase, catalytic domain K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 2.509e-297 914.0
PJS1_k127_6090401_20 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002575 258.0
PJS1_k127_6090401_21 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000009066 205.0
PJS1_k127_6090401_22 Phosphate-starvation-inducible E K13256 - - 0.0000000000000000000000000000000000000000000000000002526 187.0
PJS1_k127_6090401_23 Peptidyl-prolyl cis-trans K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000000002421 180.0
PJS1_k127_6090401_24 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000000000000000000000009595 179.0
PJS1_k127_6090401_25 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000000000000006071 151.0
PJS1_k127_6090401_26 - - - - 0.000000000000000000000000000000000003382 145.0
PJS1_k127_6090401_27 TIGRFAM type I secretion outer membrane protein, TolC family K12340 - - 0.000000000000002014 77.0
PJS1_k127_6090401_3 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 1.418e-273 844.0
PJS1_k127_6090401_4 Vitamin B12 dependent methionine synthase activation region K00548 - 2.1.1.13 6.842e-254 786.0
PJS1_k127_6090401_5 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 2.978e-239 745.0
PJS1_k127_6090401_6 Nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 1.131e-234 738.0
PJS1_k127_6090401_7 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 593.0
PJS1_k127_6090401_8 serves to protect cells from the toxic effects of hydrogen peroxide K03781 - 1.11.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 563.0
PJS1_k127_6090401_9 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 516.0
PJS1_k127_6328006_0 Neisseria PilC beta-propeller domain K02674 - - 0.0 1478.0
PJS1_k127_6328006_1 ABC transporter C-terminal domain K15738 - - 0.0 1030.0
PJS1_k127_6328006_11 ANTAR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003775 283.0
PJS1_k127_6328006_12 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001043 259.0
PJS1_k127_6328006_13 Low molecular weight phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000008685 223.0
PJS1_k127_6328006_14 Pilus assembly protein PilX - - - 0.00000000000000000000000000000000000000000000000000000000000005709 233.0
PJS1_k127_6328006_15 response regulator - - - 0.000000000000000000000000000000000000000000000000000001421 199.0
PJS1_k127_6328006_16 Type II transport protein GspH K08084 - - 0.0000000000000000000000000000000000000000000000006584 188.0
PJS1_k127_6328006_17 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000007796 182.0
PJS1_k127_6328006_18 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.000000000000000000000000000000000000000000000001673 183.0
PJS1_k127_6328006_19 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000003066 179.0
PJS1_k127_6328006_2 ABC transporter transmembrane region K12541 - - 5.22e-299 934.0
PJS1_k127_6328006_20 type IV pilus modification protein PilV K02671 - - 0.000000000000000000000000000000000000007301 158.0
PJS1_k127_6328006_21 type IV pilus modification protein PilV K02671 - - 0.0000000000000000000000000000000000005701 153.0
PJS1_k127_6328006_22 Protein conserved in bacteria - - - 0.000000000000000000000000000000001071 147.0
PJS1_k127_6328006_23 COG4968 Tfp pilus assembly protein PilE K02655 - - 0.00000000000000000000000001421 117.0
PJS1_k127_6328006_24 protein transport across the cell outer membrane K08084 - - 0.00000000000000000000007225 104.0
PJS1_k127_6328006_25 Pilus assembly protein PilX - - - 0.00000000000000000003897 96.0
PJS1_k127_6328006_26 - - - - 0.0000000000000001689 85.0
PJS1_k127_6328006_3 Class II Aldolase and Adducin N-terminal domain - - - 3.828e-259 814.0
PJS1_k127_6328006_4 HlyD family secretion protein K12542 - - 5.766e-196 624.0
PJS1_k127_6328006_5 Neisseria PilC beta-propeller domain K02674 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 641.0
PJS1_k127_6328006_6 PFAM Bile acid sodium symporter K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 528.0
PJS1_k127_6328006_7 mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 454.0
PJS1_k127_6328006_8 Type IV Pilus-assembly protein W K02672 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006457 389.0
PJS1_k127_6328006_9 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008882 323.0
PJS1_k127_700530_0 PFAM Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase - - - 0.0 1258.0
PJS1_k127_700530_1 Inorganic H+ pyrophosphatase K15987 - 3.6.1.1 0.0 1131.0
PJS1_k127_700530_10 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 2.761e-202 634.0
PJS1_k127_700530_11 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 607.0
PJS1_k127_700530_12 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005752 601.0
PJS1_k127_700530_13 methyltransferase small - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006045 581.0
PJS1_k127_700530_14 Type II secretion system (T2SS), protein F K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 575.0
PJS1_k127_700530_15 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 537.0
PJS1_k127_700530_16 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 511.0
PJS1_k127_700530_17 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 490.0
PJS1_k127_700530_18 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 475.0
PJS1_k127_700530_19 OmpA-like transmembrane domain K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 474.0
PJS1_k127_700530_2 Histidine kinase - - - 0.0 1089.0
PJS1_k127_700530_20 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008052 461.0
PJS1_k127_700530_21 GspL periplasmic domain K02461 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 463.0
PJS1_k127_700530_22 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005205 417.0
PJS1_k127_700530_23 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 415.0
PJS1_k127_700530_24 Protein of unknown function (DUF3494) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 418.0
PJS1_k127_700530_25 Protein of unknown function (DUF3494) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 409.0
PJS1_k127_700530_26 haemagglutination activity domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 416.0
PJS1_k127_700530_27 SMART HTH transcriptional regulator, Crp - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 366.0
PJS1_k127_700530_28 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005773 337.0
PJS1_k127_700530_29 Domain of unknown function (DUF4398) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 321.0
PJS1_k127_700530_3 PFAM AMP-dependent synthetase and ligase K00666 - - 1.73e-315 1020.0
PJS1_k127_700530_30 Crp-like helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 303.0
PJS1_k127_700530_31 Type II secretion system (T2SS), protein J K02459 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005502 251.0
PJS1_k127_700530_32 general secretion pathway protein K K02460 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007268 252.0
PJS1_k127_700530_33 Type II secretion system (T2SS), protein G K02456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001656 241.0
PJS1_k127_700530_34 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001062 244.0
PJS1_k127_700530_36 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000004818 220.0
PJS1_k127_700530_37 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000001947 219.0
PJS1_k127_700530_38 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000001982 211.0
PJS1_k127_700530_39 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.000000000000000000000000000000000000000000000000000002665 201.0
PJS1_k127_700530_4 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 2.713e-269 838.0
PJS1_k127_700530_40 Type II transport protein GspH K02457 - - 0.00000000000000000000000000000000000000000000000000003846 191.0
PJS1_k127_700530_41 - - - - 0.000000000000000000000000000000000000000000000000007253 186.0
PJS1_k127_700530_42 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000002475 153.0
PJS1_k127_700530_43 Type II secretion system (T2SS), protein I K02458 - - 0.00000000000000000000000000000000000000197 153.0
PJS1_k127_700530_44 Periplasmic or secreted lipoprotein - - - 0.00000000000000000000000000000000001198 140.0
PJS1_k127_700530_45 Bacterial protein of unknown function (DUF883) - - - 0.0000000000000000000000000000000003372 134.0
PJS1_k127_700530_46 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000000000000000000000000000009395 134.0
PJS1_k127_700530_48 Domain of unknown function (DUF4398) - - - 0.000000000000000000000000000000002242 132.0
PJS1_k127_700530_49 Type II secretion system protein C K02452 - - 0.000000000000000000000000000000003291 134.0
PJS1_k127_700530_5 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 1.409e-255 794.0
PJS1_k127_700530_50 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.000000000000000000000000000000004246 131.0
PJS1_k127_700530_51 Type II secretion system (T2SS), protein M K02462 - - 0.000000000000000000000000000000221 129.0
PJS1_k127_700530_52 SMART Transport-associated and nodulation - - - 0.000000000000000000000000000001562 126.0
PJS1_k127_700530_53 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337 - - 0.000000000000000000002289 102.0
PJS1_k127_700530_54 YqjK-like protein - - - 0.000000000000000000002607 100.0
PJS1_k127_700530_55 - - - - 0.00000000000003423 73.0
PJS1_k127_700530_56 Protein of unknown function (DUF3096) - - - 0.00000000003732 66.0
PJS1_k127_700530_57 Pfam:DUF1049 - - - 0.0000000005974 62.0
PJS1_k127_700530_6 secretion system protein K02453 - - 1.597e-254 802.0
PJS1_k127_700530_7 Type II/IV secretion system protein K02454 - - 2.359e-243 758.0
PJS1_k127_700530_8 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 9.259e-226 704.0
PJS1_k127_700530_9 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 1.651e-225 703.0
PJS1_k127_77363_0 phosphorelay sensor kinase activity K02342,K02851 - 2.7.7.7,2.7.8.33,2.7.8.35 3.743e-197 622.0
PJS1_k127_77363_1 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 578.0
PJS1_k127_77363_10 - - - - 0.0000000000000000002541 102.0
PJS1_k127_77363_11 ORF6N domain - - - 0.0000000007199 64.0
PJS1_k127_77363_2 PFAM alanine dehydrogenase PNT domain protein K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 593.0
PJS1_k127_77363_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 438.0
PJS1_k127_77363_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 297.0
PJS1_k127_77363_5 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.000000000000000000000000000000000000000000000000000000000000001102 219.0
PJS1_k127_77363_6 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000000000000001648 177.0
PJS1_k127_77363_7 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000000000000000000000000000000006803 145.0
PJS1_k127_77363_8 Putative quorum-sensing-regulated virulence factor K09954 - - 0.0000000000000000000000000000000003824 131.0
PJS1_k127_77363_9 Cytochrome C assembly protein - - - 0.00000000000000000000000000000001285 137.0
PJS1_k127_785461_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 4.6e-270 848.0
PJS1_k127_785461_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.513e-236 735.0
PJS1_k127_785461_10 Transporter associated domain K06189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 460.0
PJS1_k127_785461_11 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 454.0
PJS1_k127_785461_12 S4 RNA-binding domain K06182 - 5.4.99.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 424.0
PJS1_k127_785461_13 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007291 375.0
PJS1_k127_785461_14 Lumazine binding domain K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 334.0
PJS1_k127_785461_15 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 323.0
PJS1_k127_785461_16 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008525 300.0
PJS1_k127_785461_17 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002066 277.0
PJS1_k127_785461_18 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000000000003112 243.0
PJS1_k127_785461_19 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.0000000000000000000000000000000000000000000000000000000000001202 226.0
PJS1_k127_785461_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 5.46e-228 714.0
PJS1_k127_785461_20 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000000000000000001401 203.0
PJS1_k127_785461_21 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000000000000000000006711 199.0
PJS1_k127_785461_22 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000000000000000000000002718 196.0
PJS1_k127_785461_23 PFAM Excinuclease ABC C subunit domain protein K07461 - - 0.000000000000000000000000000002245 121.0
PJS1_k127_785461_24 Tetratricopeptide repeat - - - 0.0002091 54.0
PJS1_k127_785461_3 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 2.045e-213 675.0
PJS1_k127_785461_4 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000661 584.0
PJS1_k127_785461_5 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 580.0
PJS1_k127_785461_6 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 565.0
PJS1_k127_785461_7 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004979 535.0
PJS1_k127_785461_8 EAL domain K21024 - 3.1.4.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 469.0
PJS1_k127_785461_9 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 462.0
PJS1_k127_817506_0 PFAM Orn Lys Arg decarboxylase major region K01584 - 4.1.1.19 0.0 1444.0
PJS1_k127_817506_1 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0 1202.0
PJS1_k127_817506_10 PFAM type II and III secretion system protein K02453,K12282 - - 2.568e-222 702.0
PJS1_k127_817506_11 cytochrome d1, heme region K19345 - - 1.905e-216 676.0
PJS1_k127_817506_12 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 2.738e-201 632.0
PJS1_k127_817506_13 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 576.0
PJS1_k127_817506_14 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 513.0
PJS1_k127_817506_15 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 507.0
PJS1_k127_817506_16 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 464.0
PJS1_k127_817506_17 COG1522 Transcriptional regulators - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004582 446.0
PJS1_k127_817506_18 AAA domain K02450,K12283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008643 437.0
PJS1_k127_817506_19 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 400.0
PJS1_k127_817506_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1110.0
PJS1_k127_817506_20 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 389.0
PJS1_k127_817506_21 Pilus assembly protein K12279 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008057 369.0
PJS1_k127_817506_22 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006359 353.0
PJS1_k127_817506_23 Domain of unknown function DUF11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 389.0
PJS1_k127_817506_24 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 336.0
PJS1_k127_817506_25 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009366 308.0
PJS1_k127_817506_26 Predicted membrane protein (DUF2238) K08984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009108 294.0
PJS1_k127_817506_27 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 292.0
PJS1_k127_817506_28 PFAM lipolytic protein G-D-S-L family K01073 - 3.1.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 289.0
PJS1_k127_817506_29 PFAM Phosphoribosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 288.0
PJS1_k127_817506_3 cytochrome - - - 5.064e-257 798.0
PJS1_k127_817506_30 transcriptional regulator AsnC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005575 284.0
PJS1_k127_817506_31 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001798 282.0
PJS1_k127_817506_32 pyrroloquinoline quinone binding K12287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008483 294.0
PJS1_k127_817506_33 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000002488 256.0
PJS1_k127_817506_34 overlaps another CDS with the same product name - - - 0.000000000000000000000000000000000000000000000000000000000000000000005947 237.0
PJS1_k127_817506_35 Fimbrial assembly protein (PilN) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001232 241.0
PJS1_k127_817506_36 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000001877 225.0
PJS1_k127_817506_37 Tetratricopeptide repeat K12284 - - 0.000000000000000000000000000000000000000000000000000000000000002802 232.0
PJS1_k127_817506_38 carbon utilization K12280 - - 0.00000000000000000000000000000000000000000000000000000000003313 214.0
PJS1_k127_817506_39 SCO1/SenC K07152 - - 0.00000000000000000000000000000000000000000000000000000000003573 211.0
PJS1_k127_817506_4 PFAM peptidase M17 leucyl aminopeptidase domain protein K01255 - 3.4.11.1 2.248e-252 784.0
PJS1_k127_817506_40 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.000000000000000000000000000000000000006579 147.0
PJS1_k127_817506_41 Cytochrome C oxidase, cbb3-type, subunit III K19344 - - 0.00000000000000000000000000000002231 130.0
PJS1_k127_817506_43 - - - - 0.00000000000000000000000000002447 121.0
PJS1_k127_817506_44 Sel1-like repeats. - - - 0.0000000000000000000000000004516 119.0
PJS1_k127_817506_45 - K12281 - - 0.00000000000004056 84.0
PJS1_k127_817506_46 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00003087 48.0
PJS1_k127_817506_47 Biopolymer transport protein ExbD/TolR K03559 - - 0.00008775 46.0
PJS1_k127_817506_48 SprB repeat - - - 0.0007355 54.0
PJS1_k127_817506_5 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 5.525e-252 783.0
PJS1_k127_817506_6 MgsA AAA+ ATPase C terminal K07478 - - 3.69e-243 756.0
PJS1_k127_817506_7 Radical SAM - - - 4.871e-234 730.0
PJS1_k127_817506_8 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 7.204e-228 711.0
PJS1_k127_817506_9 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 1.588e-225 706.0
PJS1_k127_853187_0 Protein of unknown function - - - 0.0 1493.0
PJS1_k127_853187_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1127.0
PJS1_k127_853187_10 CHAT domain - - - 0.00000001915 55.0
PJS1_k127_853187_11 Sulfatase-modifying factor enzyme 1 - - - 0.0000003078 63.0
PJS1_k127_853187_2 Adenylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005525 584.0
PJS1_k127_853187_3 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 540.0
PJS1_k127_853187_4 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 455.0
PJS1_k127_853187_5 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000545 291.0
PJS1_k127_853187_6 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000003945 208.0
PJS1_k127_853187_7 Caspase domain - - - 0.00000000000000000000000003931 124.0
PJS1_k127_853187_8 ABC transporter - - - 0.00000000000000000006483 96.0
PJS1_k127_853187_9 Tetratricopeptide repeat - - - 0.000000000000000001681 96.0