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Overview

ID MAG03071
Name PJS3_bin.12
Sample SMP0072
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Pseudomonadales
Family Alcanivoracaceae
Genus JARGPN01
Species
Assembly information
Completeness (%) 93.77
Contamination (%) 0.73
GC content (%) 52.0
N50 (bp) 76,143
Genome size (bp) 3,149,865

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2615

Gene name Description KEGG GOs EC E-value Score Sequence
PJS3_k127_1057368_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1032.0
PJS3_k127_1057368_1 ABC transporter ATP-binding protein - - - 1e-323 995.0
PJS3_k127_1057368_10 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 2.063e-224 702.0
PJS3_k127_1057368_12 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007327 574.0
PJS3_k127_1057368_13 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 552.0
PJS3_k127_1057368_14 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 539.0
PJS3_k127_1057368_15 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008814 525.0
PJS3_k127_1057368_16 desaturase K00508 - 1.14.19.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009216 527.0
PJS3_k127_1057368_17 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 520.0
PJS3_k127_1057368_18 phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 516.0
PJS3_k127_1057368_19 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 513.0
PJS3_k127_1057368_2 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 1.348e-316 990.0
PJS3_k127_1057368_20 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 486.0
PJS3_k127_1057368_21 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 464.0
PJS3_k127_1057368_22 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs K05541 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 430.0
PJS3_k127_1057368_23 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002295 403.0
PJS3_k127_1057368_24 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 387.0
PJS3_k127_1057368_25 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 383.0
PJS3_k127_1057368_26 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005497 378.0
PJS3_k127_1057368_27 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 367.0
PJS3_k127_1057368_28 Oxidoreductase FAD-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 364.0
PJS3_k127_1057368_29 Riboflavin synthase K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005046 351.0
PJS3_k127_1057368_3 ATPase components of ABC transporters with duplicated ATPase domains - - - 1.369e-289 895.0
PJS3_k127_1057368_30 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates K01637 - 4.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 337.0
PJS3_k127_1057368_31 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 329.0
PJS3_k127_1057368_32 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 323.0
PJS3_k127_1057368_33 protein conserved in bacteria K00243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 317.0
PJS3_k127_1057368_34 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 314.0
PJS3_k127_1057368_35 ABC-type metal ion transport system, periplasmic component surface adhesin K02077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008245 311.0
PJS3_k127_1057368_36 L-2,4-diaminobutyric acid acetyltransferase K06718 - 2.3.1.178 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001093 276.0
PJS3_k127_1057368_37 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001056 278.0
PJS3_k127_1057368_38 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000002728 264.0
PJS3_k127_1057368_39 Represses the transcription of fabB, involved in unsaturated fatty acid (UFA) biosynthesis. By controlling UFA production, FabR directly influences the physical properties of the membrane bilayer K22105 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003114 267.0
PJS3_k127_1057368_4 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 8.212e-284 883.0
PJS3_k127_1057368_40 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007553 256.0
PJS3_k127_1057368_41 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001002 259.0
PJS3_k127_1057368_42 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000184 257.0
PJS3_k127_1057368_43 Non-ribosomal peptide synthetase modules and related proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004582 265.0
PJS3_k127_1057368_44 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000000000004029 247.0
PJS3_k127_1057368_45 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002625 247.0
PJS3_k127_1057368_46 Binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000000000000000000000000964 233.0
PJS3_k127_1057368_47 COG1846 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000000000000009888 236.0
PJS3_k127_1057368_48 ABC 3 transport family K02075 - - 0.0000000000000000000000000000000000000000000000000000000000000000003188 239.0
PJS3_k127_1057368_49 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.0000000000000000000000000000000000000000000000000000000000000000343 224.0
PJS3_k127_1057368_5 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 2.776e-243 755.0
PJS3_k127_1057368_50 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000000000000000000000000004172 216.0
PJS3_k127_1057368_51 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000000004234 203.0
PJS3_k127_1057368_52 ATPase or kinase K06925 - - 0.00000000000000000000000000000000000000000000000000001093 192.0
PJS3_k127_1057368_53 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000003397 186.0
PJS3_k127_1057368_54 TIGRFAM Thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000000000000000000000000005676 179.0
PJS3_k127_1057368_55 Domain of unknown function (DUF4399) - - - 0.000000000000000000000000000000000000000000000518 169.0
PJS3_k127_1057368_56 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.0000000000000000000000000000000000000171 155.0
PJS3_k127_1057368_57 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000001585 141.0
PJS3_k127_1057368_58 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000000000000000000002925 142.0
PJS3_k127_1057368_59 Integrase catalytic - - - 0.000000000000000000000000000000104 126.0
PJS3_k127_1057368_6 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 5.272e-238 743.0
PJS3_k127_1057368_60 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000000001634 127.0
PJS3_k127_1057368_61 Protein of unknown function (DUF2750) - - - 0.0000000000000000000000000000003823 126.0
PJS3_k127_1057368_62 DNA replication, synthesis of RNA primer K02686 GO:0000228,GO:0000428,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005658,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006270,GO:0006276,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0016070,GO:0018130,GO:0019438,GO:0030880,GO:0030894,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043596,GO:0043601,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0046483,GO:0050896,GO:0055029,GO:0061695,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990077,GO:1990099,GO:1990234,GO:1990837 - 0.00000000000000000000000001139 113.0
PJS3_k127_1057368_64 MBOAT, membrane-bound O-acyltransferase family - - - 0.000000000000000000000000991 116.0
PJS3_k127_1057368_65 - - - - 0.000000000000000000000002956 106.0
PJS3_k127_1057368_67 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000000001044 85.0
PJS3_k127_1057368_68 Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a - - - 0.00000000000000005251 85.0
PJS3_k127_1057368_69 Integrase catalytic - - - 0.000000000004877 66.0
PJS3_k127_1057368_7 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 1.084e-232 726.0
PJS3_k127_1057368_71 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000002468 57.0
PJS3_k127_1057368_72 Transmembrane anti-sigma factor - - - 0.000004554 52.0
PJS3_k127_1057368_74 lipolytic protein G-D-S-L family - - - 0.00003695 55.0
PJS3_k127_1057368_75 PFAM Sulfotransferase domain - - - 0.00004892 54.0
PJS3_k127_1057368_8 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 2.934e-228 713.0
PJS3_k127_1057368_9 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.294e-227 710.0
PJS3_k127_1248831_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 999.0
PJS3_k127_1248831_1 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 2.197e-287 888.0
PJS3_k127_1248831_10 ATPase, AAA K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 452.0
PJS3_k127_1248831_11 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 443.0
PJS3_k127_1248831_12 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 439.0
PJS3_k127_1248831_13 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 394.0
PJS3_k127_1248831_14 COG1192 ATPases involved in chromosome partitioning - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 387.0
PJS3_k127_1248831_15 Transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 376.0
PJS3_k127_1248831_16 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000766 373.0
PJS3_k127_1248831_17 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 370.0
PJS3_k127_1248831_18 Domain of unknown function (DUF4062) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 361.0
PJS3_k127_1248831_19 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 352.0
PJS3_k127_1248831_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 9.518e-287 890.0
PJS3_k127_1248831_20 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 344.0
PJS3_k127_1248831_21 MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009433 329.0
PJS3_k127_1248831_22 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 329.0
PJS3_k127_1248831_23 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007101 331.0
PJS3_k127_1248831_24 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000501 276.0
PJS3_k127_1248831_25 Belongs to the WrbA family K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002512 273.0
PJS3_k127_1248831_26 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004029 271.0
PJS3_k127_1248831_27 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005011 268.0
PJS3_k127_1248831_28 Histidine kinase K07717,K15011 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000175 277.0
PJS3_k127_1248831_29 TIGRFAM Methylated-DNA- protein -cysteine S-methyltransferase, DNA binding K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000004492 252.0
PJS3_k127_1248831_3 COG0514 Superfamily II DNA helicase K03654 - 3.6.4.12 3.357e-275 859.0
PJS3_k127_1248831_30 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000000000000005429 238.0
PJS3_k127_1248831_31 COG1309 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000003924 225.0
PJS3_k127_1248831_32 membrane protein domain - - - 0.00000000000000000000000000000000000000000000000000000000000002453 224.0
PJS3_k127_1248831_33 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000000007115 218.0
PJS3_k127_1248831_34 Domain of unknown function (DUF4350) - - - 0.000000000000000000000000000000000000000000000000000000002453 217.0
PJS3_k127_1248831_35 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 - - 0.00000000000000000000000000000000000000000000000000000001114 203.0
PJS3_k127_1248831_36 Biopolymer transport protein K03560 - - 0.0000000000000000000000000000000000000000000000000000001863 199.0
PJS3_k127_1248831_38 protein, possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000000000000000000000002766 186.0
PJS3_k127_1248831_39 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000287 190.0
PJS3_k127_1248831_4 acyl-CoA dehydrogenase K09456 - - 9.782e-267 831.0
PJS3_k127_1248831_40 Thioesterase K01075,K07107 - 3.1.2.23 0.0000000000000000000000000000000000000000000000003091 181.0
PJS3_k127_1248831_41 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000000000000000000000000000005419 181.0
PJS3_k127_1248831_42 arsenate reductase K00537 - 1.20.4.1 0.0000000000000000000000000000000000000000000000813 172.0
PJS3_k127_1248831_44 Bacterial DNA-binding protein - - - 0.000000000000000000000000000000000000008018 150.0
PJS3_k127_1248831_45 ABC-type phosphate transport system, periplasmic component - - - 0.00000000000000000000000001087 115.0
PJS3_k127_1248831_46 Transcriptional regulator K16137 - - 0.00000000000000000000000006367 114.0
PJS3_k127_1248831_47 membrane - - - 0.000000000000000000000000143 110.0
PJS3_k127_1248831_48 Aminopeptidase - - - 0.0000000000000000000000005491 108.0
PJS3_k127_1248831_49 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000019 93.0
PJS3_k127_1248831_5 Involved in the TonB-independent uptake of proteins K03641 - - 2.84e-203 641.0
PJS3_k127_1248831_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 592.0
PJS3_k127_1248831_7 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 574.0
PJS3_k127_1248831_8 membrane K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 482.0
PJS3_k127_1248831_9 Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons K01563 - 3.8.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 459.0
PJS3_k127_1317292_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1333.0
PJS3_k127_1317292_1 Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present K03657 - 3.6.4.12 0.0 1103.0
PJS3_k127_1317292_10 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 - 3.1.11.5 3.449e-202 676.0
PJS3_k127_1317292_11 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 2.324e-194 618.0
PJS3_k127_1317292_13 COG0659 Sulfate permease and related transporters (MFS superfamily) K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009485 579.0
PJS3_k127_1317292_14 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 GO:0000724,GO:0000725,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004519,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008854,GO:0009314,GO:0009338,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044355,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0099046,GO:0140097,GO:1901360,GO:1902494 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009825 590.0
PJS3_k127_1317292_15 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 558.0
PJS3_k127_1317292_16 Pyridine nucleotide-disulphide oxidoreductase K05297 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0015046,GO:0016491,GO:0016730,GO:0016731,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.18.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 554.0
PJS3_k127_1317292_17 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 548.0
PJS3_k127_1317292_18 Phosphate ABC transporter substrate-binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 546.0
PJS3_k127_1317292_19 Domain of unknown function (DUF3333) K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008728 545.0
PJS3_k127_1317292_2 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0 1043.0
PJS3_k127_1317292_20 carboxylic ester hydrolase activity K01054 - 3.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006427 513.0
PJS3_k127_1317292_21 SBF-like CPA transporter family (DUF4137) K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 493.0
PJS3_k127_1317292_22 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 479.0
PJS3_k127_1317292_23 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 478.0
PJS3_k127_1317292_24 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 469.0
PJS3_k127_1317292_25 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 439.0
PJS3_k127_1317292_26 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 433.0
PJS3_k127_1317292_27 Peroxiredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006568 421.0
PJS3_k127_1317292_28 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008907 417.0
PJS3_k127_1317292_29 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 418.0
PJS3_k127_1317292_3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 8.717e-304 940.0
PJS3_k127_1317292_30 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 402.0
PJS3_k127_1317292_31 COG3568 Metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009833 394.0
PJS3_k127_1317292_32 NADPH-dependent FMN reductase K11811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 383.0
PJS3_k127_1317292_33 ATPase, AAA K06923 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 364.0
PJS3_k127_1317292_34 Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006347 365.0
PJS3_k127_1317292_35 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 GO:0000166,GO:0000724,GO:0000725,GO:0003674,GO:0003824,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008854,GO:0009338,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043142,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 360.0
PJS3_k127_1317292_36 COG1108 ABC-type Mn2 Zn2 transport systems, permease components K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 338.0
PJS3_k127_1317292_37 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003176 327.0
PJS3_k127_1317292_38 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 302.0
PJS3_k127_1317292_39 hemolysin III K11068 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003983 293.0
PJS3_k127_1317292_4 - - - - 3.53e-277 870.0
PJS3_k127_1317292_40 Sugar-binding cellulase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001392 291.0
PJS3_k127_1317292_41 Thiol disulfide interchange protein K03673 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002137 279.0
PJS3_k127_1317292_43 COG2863 Cytochrome c553 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001301 256.0
PJS3_k127_1317292_44 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000006562 251.0
PJS3_k127_1317292_45 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001919 246.0
PJS3_k127_1317292_47 transporter component K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000002996 233.0
PJS3_k127_1317292_48 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.00000000000000000000000000000000000000000000000000000000000002633 227.0
PJS3_k127_1317292_49 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000000000000000000005376 213.0
PJS3_k127_1317292_5 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 1.267e-239 746.0
PJS3_k127_1317292_50 hydrolase K10806 - - 0.000000000000000000000000000000000000000000000000000000001253 203.0
PJS3_k127_1317292_51 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000891 211.0
PJS3_k127_1317292_52 RF-1 domain K15034 - - 0.00000000000000000000000000000000000000000000000000000006704 199.0
PJS3_k127_1317292_53 ABC-type Zn2 transport system, periplasmic component surface adhesin K09815 - - 0.00000000000000000000000000000000000000000000000000002073 199.0
PJS3_k127_1317292_55 transporter component K07112 - - 0.00000000000000000000000000000000000000000000000000007244 189.0
PJS3_k127_1317292_56 COG0517 FOG CBS domain - - - 0.000000000000000000000000000000000000000000000000002737 186.0
PJS3_k127_1317292_57 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.000000000000000000000000000000000000000000000000007435 186.0
PJS3_k127_1317292_58 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000007963 183.0
PJS3_k127_1317292_59 L-2,4-diaminobutyric acid acetyltransferase K06718 - 2.3.1.178 0.000000000000000000000000000000000000000000006376 168.0
PJS3_k127_1317292_6 probably responsible for the translocation of the substrate across the membrane K02037 - - 1.005e-211 666.0
PJS3_k127_1317292_60 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00000000000000000000000000000000000000000001415 168.0
PJS3_k127_1317292_61 COG3245 Cytochrome c5 - - - 0.0000000000000000000000000000000000002691 143.0
PJS3_k127_1317292_62 helix_turn_helix, Arsenical Resistance Operon Repressor - GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000004559 136.0
PJS3_k127_1317292_64 Transcriptional K03892 - - 0.00000000000000000000000000000004857 128.0
PJS3_k127_1317292_65 secreted trypsin-like serine protease K01325 - 3.4.21.35 0.0000000000000000000000000000002073 142.0
PJS3_k127_1317292_66 rubredoxin - - - 0.0000000000000000000000000005141 114.0
PJS3_k127_1317292_68 Domain of unknown function (DUF4329) - - - 0.0000000000000000006263 89.0
PJS3_k127_1317292_69 - - - - 0.000000000000000004119 87.0
PJS3_k127_1317292_7 X-Pro dipeptidyl-peptidase (S15 family) - - - 6.986e-206 655.0
PJS3_k127_1317292_71 Belongs to the SlyX family K03745 - - 0.000000000002947 69.0
PJS3_k127_1317292_73 Sulfotransferase family - - - 0.000000003398 66.0
PJS3_k127_1317292_8 Histidine kinase K07636 - 2.7.13.3 3.985e-204 643.0
PJS3_k127_1317292_9 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 1.032e-203 644.0
PJS3_k127_1409247_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0 1732.0
PJS3_k127_1409247_1 X-Pro dipeptidyl-peptidase (S15 family) - - - 7.301e-213 677.0
PJS3_k127_1409247_10 Protein of unknown function (DUF1461) - - - 0.00000000000000000000000000000000000000000000000000000000000019 222.0
PJS3_k127_1409247_11 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 - - 0.00000000000000000000000000000000000000000000000000000007199 209.0
PJS3_k127_1409247_12 secretion system protein G K02456 - - 0.00000000000000000000000000000000000000000000000000002941 190.0
PJS3_k127_1409247_13 COG3288 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.00000000000000000000000000000000000001202 148.0
PJS3_k127_1409247_14 general secretion pathway protein K02458 - - 0.00000000000000000000000000000001742 134.0
PJS3_k127_1409247_15 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 - - 0.000000000000000000000000000002334 126.0
PJS3_k127_1409247_16 Prokaryotic N-terminal methylation motif K02457 - - 0.0000000000000000000001585 105.0
PJS3_k127_1409247_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 604.0
PJS3_k127_1409247_3 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008571 518.0
PJS3_k127_1409247_4 kinase activity K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007705 488.0
PJS3_k127_1409247_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 406.0
PJS3_k127_1409247_6 mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 379.0
PJS3_k127_1409247_7 COG3156 Type II secretory pathway, component PulK K02460 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 316.0
PJS3_k127_1409247_8 Salt-induced outer membrane protein K07283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001078 270.0
PJS3_k127_1409247_9 general secretion pathway protein K02459 - - 0.00000000000000000000000000000000000000000000000000000000000004494 221.0
PJS3_k127_149781_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1130.0
PJS3_k127_149781_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1045.0
PJS3_k127_149781_10 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 534.0
PJS3_k127_149781_11 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 508.0
PJS3_k127_149781_12 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 451.0
PJS3_k127_149781_13 COG3203 Outer membrane protein (porin) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 410.0
PJS3_k127_149781_14 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 376.0
PJS3_k127_149781_15 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009314,GO:0009416,GO:0009628,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0050896,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006746 376.0
PJS3_k127_149781_16 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 364.0
PJS3_k127_149781_17 Dynamin family K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009898,GO:0009987,GO:0016020,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0019843,GO:0019897,GO:0019898,GO:0022613,GO:0031234,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0036211,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044877,GO:0046777,GO:0070181,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 369.0
PJS3_k127_149781_18 COG3203 Outer membrane protein (porin) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 341.0
PJS3_k127_149781_19 pyrophosphohydrolase K04765 - 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 331.0
PJS3_k127_149781_2 hydroxymethylglutaryl-CoA reductase K00021 - 1.1.1.34 0.0 1039.0
PJS3_k127_149781_20 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 312.0
PJS3_k127_149781_21 UbiA prenyltransferase family K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 317.0
PJS3_k127_149781_22 membrane protein (homolog of Drosophila rhomboid) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 319.0
PJS3_k127_149781_23 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000458 312.0
PJS3_k127_149781_24 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 291.0
PJS3_k127_149781_25 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 287.0
PJS3_k127_149781_26 PFAM AMP-dependent synthetase and ligase K22319 - 6.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001312 301.0
PJS3_k127_149781_27 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004911 293.0
PJS3_k127_149781_28 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000271 277.0
PJS3_k127_149781_29 Negative regulator of sigma E activity K03598 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000394 273.0
PJS3_k127_149781_3 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007,K21787 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016999,GO:0017000,GO:0017144,GO:0044237,GO:0044249 2.7.9.2 9.259e-316 992.0
PJS3_k127_149781_30 Thiol disulfide interchange protein K02199 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000028 250.0
PJS3_k127_149781_31 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000000000003899 242.0
PJS3_k127_149781_32 COG4235, Cytochrome c biogenesis factor K02200 - - 0.000000000000000000000000000000000000000000000000000000000000000001378 239.0
PJS3_k127_149781_33 phosphatidylcholine synthase activity K01004,K17103 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050520,GO:0071704,GO:0090407,GO:1901576 2.7.8.24,2.7.8.8 0.00000000000000000000000000000000000000000000002986 177.0
PJS3_k127_149781_34 Pfam:DUF46 - - - 0.0000000000000000000000000000000000000000000117 168.0
PJS3_k127_149781_35 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.000000000000000000000000000000000000000001685 164.0
PJS3_k127_149781_36 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000000000002878 157.0
PJS3_k127_149781_37 Positive regulator of K03803 - - 0.00000000000000000000000000000005926 129.0
PJS3_k127_149781_38 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000004903 123.0
PJS3_k127_149781_39 Domain of unknown function (DUF4845) - - - 0.0000000002549 66.0
PJS3_k127_149781_4 Cytochrome c-type biogenesis protein K02198 - - 3.735e-290 904.0
PJS3_k127_149781_5 Histidine kinase K07678 - 2.7.13.3 2.126e-264 842.0
PJS3_k127_149781_6 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 6.42e-232 730.0
PJS3_k127_149781_7 catalyzes a condensation reaction in fatty acid biosynthesis addition of an acyl acceptor of two carbons from malonyl-ACP K00647 - 2.3.1.41 1.298e-208 653.0
PJS3_k127_149781_8 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 3.609e-199 629.0
PJS3_k127_149781_9 exporters of the RND superfamily K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007158 586.0
PJS3_k127_1612771_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0 1581.0
PJS3_k127_1612771_1 Involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain K03578 - 3.6.4.13 0.0 1508.0
PJS3_k127_1612771_10 protease with the C-terminal PDZ domain - - - 4.839e-261 816.0
PJS3_k127_1612771_100 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006248 361.0
PJS3_k127_1612771_101 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 351.0
PJS3_k127_1612771_102 Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host K05801 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005982 344.0
PJS3_k127_1612771_103 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009248 351.0
PJS3_k127_1612771_104 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 339.0
PJS3_k127_1612771_105 Predicted metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 329.0
PJS3_k127_1612771_106 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 325.0
PJS3_k127_1612771_107 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 323.0
PJS3_k127_1612771_108 metal-dependent phosphoesterases (PHP family) K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 328.0
PJS3_k127_1612771_109 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 327.0
PJS3_k127_1612771_11 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 9.467e-255 805.0
PJS3_k127_1612771_110 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 324.0
PJS3_k127_1612771_111 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 319.0
PJS3_k127_1612771_112 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 312.0
PJS3_k127_1612771_113 Predicted membrane protein (DUF2157) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 319.0
PJS3_k127_1612771_114 Histidine phosphatase superfamily (branch 1) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 304.0
PJS3_k127_1612771_115 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 307.0
PJS3_k127_1612771_116 (Lipo)protein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 310.0
PJS3_k127_1612771_117 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 301.0
PJS3_k127_1612771_118 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531 303.0
PJS3_k127_1612771_119 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 299.0
PJS3_k127_1612771_12 Sulfate permease and related transporters (MFS superfamily) K03321 - - 1.017e-254 793.0
PJS3_k127_1612771_120 sugar transferases, involved in - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004819 291.0
PJS3_k127_1612771_121 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 288.0
PJS3_k127_1612771_122 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002186 283.0
PJS3_k127_1612771_123 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002224 286.0
PJS3_k127_1612771_124 protein conserved in bacteria K09929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004437 279.0
PJS3_k127_1612771_125 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002999 269.0
PJS3_k127_1612771_126 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002986 275.0
PJS3_k127_1612771_127 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000005659 262.0
PJS3_k127_1612771_128 PhnA protein K06193 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008912 261.0
PJS3_k127_1612771_129 AraC family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001133 269.0
PJS3_k127_1612771_13 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 2.884e-233 725.0
PJS3_k127_1612771_130 COG0110 Acetyltransferase (isoleucine patch superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001431 256.0
PJS3_k127_1612771_131 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008893 261.0
PJS3_k127_1612771_132 DoxX - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001273 254.0
PJS3_k127_1612771_133 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000004059 252.0
PJS3_k127_1612771_134 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000001189 246.0
PJS3_k127_1612771_135 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001204 248.0
PJS3_k127_1612771_136 nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003389 258.0
PJS3_k127_1612771_137 Capsular polysaccharide biosynthesis protein CapK K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000003383 252.0
PJS3_k127_1612771_138 COG2030 Acyl dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001114 236.0
PJS3_k127_1612771_139 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000009992 235.0
PJS3_k127_1612771_14 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 8.152e-229 711.0
PJS3_k127_1612771_140 colicin V production K03558 - - 0.0000000000000000000000000000000000000000000000000000000000000000002271 234.0
PJS3_k127_1612771_141 Lipase chaperone - - - 0.0000000000000000000000000000000000000000000000000000000000000000002444 243.0
PJS3_k127_1612771_142 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000000000000000000000000000000000004923 238.0
PJS3_k127_1612771_143 acyl-CoA thioesterase K01073 - 3.1.2.20 0.000000000000000000000000000000000000000000000000000000000000001775 227.0
PJS3_k127_1612771_144 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000002164 225.0
PJS3_k127_1612771_145 nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000003614 217.0
PJS3_k127_1612771_146 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000002491 215.0
PJS3_k127_1612771_147 Bacterial SH3 domain K07184 - - 0.000000000000000000000000000000000000000000000000000000000005149 215.0
PJS3_k127_1612771_148 Domain of unknown function (DUF4442) - - - 0.00000000000000000000000000000000000000000000000000000000003158 209.0
PJS3_k127_1612771_149 GXWXG protein - - - 0.000000000000000000000000000000000000000000000000000000000205 208.0
PJS3_k127_1612771_15 Neutral/alkaline non-lysosomal ceramidase, N-terminal K12349 - 3.5.1.23 2.026e-228 726.0
PJS3_k127_1612771_150 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0000000000000000000000000000000000000000000000000000000002084 205.0
PJS3_k127_1612771_151 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.0000000000000000000000000000000000000000000000000000000006345 206.0
PJS3_k127_1612771_152 GDSL-like Lipase/Acylhydrolase K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.000000000000000000000000000000000000000000000000000000007713 206.0
PJS3_k127_1612771_153 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000006733 200.0
PJS3_k127_1612771_154 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000219 194.0
PJS3_k127_1612771_155 Glutaredoxin - - - 0.00000000000000000000000000000000000000000000000000937 183.0
PJS3_k127_1612771_156 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000001079 187.0
PJS3_k127_1612771_157 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.00000000000000000000000000000000000000000000000001534 182.0
PJS3_k127_1612771_158 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.00000000000000000000000000000000000000000000000005944 189.0
PJS3_k127_1612771_159 Thioesterase-like superfamily - - - 0.00000000000000000000000000000000000000000000000006038 183.0
PJS3_k127_1612771_16 Polysaccharide biosynthesis protein - - - 7.574e-221 702.0
PJS3_k127_1612771_160 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104,K20945 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.00000000000000000000000000000000000000000000007124 172.0
PJS3_k127_1612771_161 Glycosyltransferase, group 2 family protein - - - 0.00000000000000000000000000000000000000000000007679 180.0
PJS3_k127_1612771_162 EVE domain - - - 0.000000000000000000000000000000000000000000001183 170.0
PJS3_k127_1612771_163 YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the K09780 - - 0.00000000000000000000000000000000000000000001052 163.0
PJS3_k127_1612771_164 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000008462 168.0
PJS3_k127_1612771_165 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.00000000000000000000000000000000000000001979 166.0
PJS3_k127_1612771_167 - - - - 0.00000000000000000000000000000000000008499 148.0
PJS3_k127_1612771_168 Outer Membrane Lipoprotein - - - 0.0000000000000000000000000000000000008852 149.0
PJS3_k127_1612771_169 - - - - 0.00000000000000000000000000000000000836 139.0
PJS3_k127_1612771_17 protein conserved in bacteria K09989 - - 1.696e-219 684.0
PJS3_k127_1612771_170 Protein of unknown function (DUF2505) - - - 0.00000000000000000000000000000000002817 140.0
PJS3_k127_1612771_171 Cold shock protein domain K03704 - - 0.00000000000000000000000000000000009748 133.0
PJS3_k127_1612771_172 - - - - 0.000000000000000000000000000000003298 141.0
PJS3_k127_1612771_173 - - - - 0.00000000000000000000000000000001262 135.0
PJS3_k127_1612771_174 GDYXXLXY protein - - - 0.0000000000000000000000000000001759 131.0
PJS3_k127_1612771_175 - - - - 0.000000000000000000000000000001559 129.0
PJS3_k127_1612771_176 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000005448 126.0
PJS3_k127_1612771_177 Sporulation related domain K03749 - - 0.00000000000000000000000000001377 126.0
PJS3_k127_1612771_179 protein conserved in bacteria - - - 0.0000000000000000000000000001121 120.0
PJS3_k127_1612771_18 Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues K01791,K08068 - 3.2.1.183,5.1.3.14 3.91e-218 679.0
PJS3_k127_1612771_180 - - - - 0.00000000000000000000007866 103.0
PJS3_k127_1612771_181 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000001456 97.0
PJS3_k127_1612771_182 MAPEG family K07136 - - 0.000000000000000000003713 98.0
PJS3_k127_1612771_183 Glycosyl transferases group 1 - - - 0.0000000000000003909 88.0
PJS3_k127_1612771_184 Competence protein ComEA K02237 - - 0.000000000000003558 78.0
PJS3_k127_1612771_185 polysaccharide catabolic process K01179,K01218 - 3.2.1.4,3.2.1.78 0.00000000000001312 88.0
PJS3_k127_1612771_187 - - - - 0.00000000004603 74.0
PJS3_k127_1612771_188 Putative prokaryotic signal transducing protein - - - 0.0000000001858 67.0
PJS3_k127_1612771_19 protein involved in exopolysaccharide biosynthesis K16554,K16692 - - 2.403e-216 693.0
PJS3_k127_1612771_190 Bacterial regulatory proteins, tetR family K09017 - - 0.0000000158 64.0
PJS3_k127_1612771_192 intracellular chloride channel activity K05027,K05030 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005215,GO:0005216,GO:0005229,GO:0005253,GO:0005254,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005887,GO:0005902,GO:0006508,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006821,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008509,GO:0012505,GO:0012506,GO:0015075,GO:0015103,GO:0015108,GO:0015267,GO:0015276,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0016324,GO:0016787,GO:0019538,GO:0022803,GO:0022834,GO:0022836,GO:0022838,GO:0022839,GO:0022857,GO:0030141,GO:0030659,GO:0030667,GO:0031090,GO:0031224,GO:0031226,GO:0031410,GO:0031982,GO:0034220,GO:0042588,GO:0042589,GO:0042995,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0044238,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045177,GO:0051179,GO:0051234,GO:0055085,GO:0061778,GO:0070011,GO:0071704,GO:0071944,GO:0097708,GO:0098588,GO:0098590,GO:0098656,GO:0098660,GO:0098661,GO:0098805,GO:0098858,GO:0099503,GO:0120025,GO:0140096,GO:1901564,GO:1902476 - 0.000004375 60.0
PJS3_k127_1612771_193 - - - - 0.00001025 51.0
PJS3_k127_1612771_194 - - - - 0.00006318 45.0
PJS3_k127_1612771_2 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1314.0
PJS3_k127_1612771_20 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 2.13e-213 669.0
PJS3_k127_1612771_21 Belongs to the GPI family K01810 - 5.3.1.9 7.436e-209 663.0
PJS3_k127_1612771_22 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 1.301e-205 643.0
PJS3_k127_1612771_23 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 6.541e-205 640.0
PJS3_k127_1612771_24 Acyl-CoA dehydrogenase, C-terminal domain K00253 - 1.3.8.4 6.893e-204 639.0
PJS3_k127_1612771_25 acyl-CoA dehydrogenase - - - 6.643e-202 644.0
PJS3_k127_1612771_26 Belongs to the DegT DnrJ EryC1 family - - - 4.288e-201 632.0
PJS3_k127_1612771_27 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 1.227e-197 622.0
PJS3_k127_1612771_28 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 1.821e-195 639.0
PJS3_k127_1612771_29 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 3.801e-194 609.0
PJS3_k127_1612771_3 Domain of unknown function (DUF3362) - - - 0.0 1209.0
PJS3_k127_1612771_30 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 9.556e-194 622.0
PJS3_k127_1612771_31 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 607.0
PJS3_k127_1612771_32 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 605.0
PJS3_k127_1612771_33 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 623.0
PJS3_k127_1612771_34 differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs K00648,K16872 - 2.3.1.180,2.3.1.207 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 592.0
PJS3_k127_1612771_35 transporter K12942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 595.0
PJS3_k127_1612771_36 Tfp pilus assembly protein K08086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 613.0
PJS3_k127_1612771_37 COG1305 Transglutaminase-like enzymes K22452 - 2.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 598.0
PJS3_k127_1612771_38 NAD(P)H-binding K17716 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005682 561.0
PJS3_k127_1612771_39 carnitine dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 557.0
PJS3_k127_1612771_4 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.0 1028.0
PJS3_k127_1612771_40 glycosyl transferase group 1 K03208 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 544.0
PJS3_k127_1612771_41 epimerase dehydratase K02473,K17947 - 5.1.3.25,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 534.0
PJS3_k127_1612771_42 Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 538.0
PJS3_k127_1612771_43 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 530.0
PJS3_k127_1612771_44 acetyltransferases and hydrolases with the alpha beta hydrolase fold K01046 - 3.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 510.0
PJS3_k127_1612771_45 ATPase, AAA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 509.0
PJS3_k127_1612771_46 COG3555 Aspartyl asparaginyl beta-hydroxylase and related dioxygenases K12979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 504.0
PJS3_k127_1612771_47 Fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 508.0
PJS3_k127_1612771_48 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 499.0
PJS3_k127_1612771_49 UDP-glucose 4-epimerase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 501.0
PJS3_k127_1612771_5 Asparagine synthase K01953 - 6.3.5.4 6.821e-294 914.0
PJS3_k127_1612771_50 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 496.0
PJS3_k127_1612771_51 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 498.0
PJS3_k127_1612771_52 alginic acid biosynthetic process K01729 - 4.2.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 520.0
PJS3_k127_1612771_53 electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008721 490.0
PJS3_k127_1612771_54 fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 482.0
PJS3_k127_1612771_55 Domain of Unknown Function (DUF349) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 500.0
PJS3_k127_1612771_56 Glycosyl transferase family 4 K13007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 470.0
PJS3_k127_1612771_57 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009775 473.0
PJS3_k127_1612771_58 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 461.0
PJS3_k127_1612771_59 (ABC) transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009136 458.0
PJS3_k127_1612771_6 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 6.65e-286 883.0
PJS3_k127_1612771_60 Esterase lipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007002 454.0
PJS3_k127_1612771_61 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000739 454.0
PJS3_k127_1612771_62 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 442.0
PJS3_k127_1612771_63 haloacid K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007605 440.0
PJS3_k127_1612771_64 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 449.0
PJS3_k127_1612771_65 COG0515 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 445.0
PJS3_k127_1612771_66 Saccharopine dehydrogenase NADP binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 441.0
PJS3_k127_1612771_67 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 430.0
PJS3_k127_1612771_68 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 429.0
PJS3_k127_1612771_69 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 435.0
PJS3_k127_1612771_7 Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01886 - 6.1.1.18 2.682e-280 869.0
PJS3_k127_1612771_70 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 429.0
PJS3_k127_1612771_71 ATPase, AAA K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006309 423.0
PJS3_k127_1612771_72 glycosyl transferase group 1 K13004,K21011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009667 428.0
PJS3_k127_1612771_73 Belongs to the UPF0276 family K09930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 422.0
PJS3_k127_1612771_74 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 419.0
PJS3_k127_1612771_75 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 414.0
PJS3_k127_1612771_76 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 420.0
PJS3_k127_1612771_77 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 412.0
PJS3_k127_1612771_78 Preprotein translocase subunit SecA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 409.0
PJS3_k127_1612771_79 Belongs to the DEAD box helicase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004137 412.0
PJS3_k127_1612771_8 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 9.945e-268 828.0
PJS3_k127_1612771_80 Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004137 404.0
PJS3_k127_1612771_81 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008888 399.0
PJS3_k127_1612771_82 Small-conductance mechanosensitive channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 391.0
PJS3_k127_1612771_83 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000725 392.0
PJS3_k127_1612771_84 Capsule assembly protein Wzi - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 399.0
PJS3_k127_1612771_85 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007524 385.0
PJS3_k127_1612771_86 Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 384.0
PJS3_k127_1612771_87 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 383.0
PJS3_k127_1612771_88 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 385.0
PJS3_k127_1612771_89 Male sterility protein K00091,K01784 - 1.1.1.219,5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 385.0
PJS3_k127_1612771_9 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 3.048e-265 823.0
PJS3_k127_1612771_90 COG1226 Kef-type K transport systems K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 380.0
PJS3_k127_1612771_91 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 383.0
PJS3_k127_1612771_92 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257 396.0
PJS3_k127_1612771_93 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 370.0
PJS3_k127_1612771_94 of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 368.0
PJS3_k127_1612771_95 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 364.0
PJS3_k127_1612771_96 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 358.0
PJS3_k127_1612771_97 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 364.0
PJS3_k127_1612771_98 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 359.0
PJS3_k127_1612771_99 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 356.0
PJS3_k127_16348_0 DNA polymerase K02337 - 2.7.7.7 0.0 1757.0
PJS3_k127_16348_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1578.0
PJS3_k127_16348_10 Belongs to the aldehyde dehydrogenase family K00128,K06447 - 1.2.1.3,1.2.1.71 1.839e-265 822.0
PJS3_k127_16348_11 COG0642 Signal transduction histidine kinase - - - 2.061e-255 819.0
PJS3_k127_16348_12 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 3.735e-255 796.0
PJS3_k127_16348_13 belongs to the aldehyde dehydrogenase family K22445 - 1.2.99.10 7.136e-255 796.0
PJS3_k127_16348_14 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 3.492e-245 760.0
PJS3_k127_16348_15 COG0146 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 2.638e-230 722.0
PJS3_k127_16348_16 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 7.356e-230 718.0
PJS3_k127_16348_17 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 1.034e-229 720.0
PJS3_k127_16348_18 serine threonine protein kinase K12132 - 2.7.11.1 2.129e-221 722.0
PJS3_k127_16348_19 Protein of unknown function (DUF3592) - - - 3.953e-200 638.0
PJS3_k127_16348_2 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1252.0
PJS3_k127_16348_20 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 639.0
PJS3_k127_16348_21 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007166 616.0
PJS3_k127_16348_22 Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 594.0
PJS3_k127_16348_23 Catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate K14267 - 2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 594.0
PJS3_k127_16348_24 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 576.0
PJS3_k127_16348_25 Histidine kinase K07639 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 580.0
PJS3_k127_16348_26 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007615 569.0
PJS3_k127_16348_27 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 546.0
PJS3_k127_16348_28 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 531.0
PJS3_k127_16348_29 Part of a membrane complex involved in electron transport K03614 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 520.0
PJS3_k127_16348_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1168.0
PJS3_k127_16348_30 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 522.0
PJS3_k127_16348_31 COG0642 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004625 529.0
PJS3_k127_16348_32 dioxygenase K11159 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 519.0
PJS3_k127_16348_33 Belongs to the RimK family K05844 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 507.0
PJS3_k127_16348_34 Deacylase K06987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 498.0
PJS3_k127_16348_35 Esterase of the alpha-beta hydrolase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 495.0
PJS3_k127_16348_36 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007019 481.0
PJS3_k127_16348_37 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 - 2.1.3.3,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006882 471.0
PJS3_k127_16348_38 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007046 466.0
PJS3_k127_16348_39 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 448.0
PJS3_k127_16348_4 Belongs to the TPP enzyme family K01652 - 2.2.1.6 2.02e-312 961.0
PJS3_k127_16348_40 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 448.0
PJS3_k127_16348_41 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 448.0
PJS3_k127_16348_42 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 453.0
PJS3_k127_16348_43 Peptidase_C39 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 437.0
PJS3_k127_16348_44 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006945 424.0
PJS3_k127_16348_45 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009922 427.0
PJS3_k127_16348_46 Protein of unknown function (DUF2817) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 402.0
PJS3_k127_16348_47 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 392.0
PJS3_k127_16348_48 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 385.0
PJS3_k127_16348_49 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 382.0
PJS3_k127_16348_5 Part of a membrane complex involved in electron transport K03615 - - 7.605e-298 942.0
PJS3_k127_16348_50 consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07661 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 381.0
PJS3_k127_16348_51 Part of a membrane complex involved in electron transport K03613 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 376.0
PJS3_k127_16348_52 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007431 367.0
PJS3_k127_16348_53 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0000702,GO:0000703,GO:0003674,GO:0003824,GO:0003906,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0034644,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0090304,GO:0104004,GO:0140097,GO:1901360 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 362.0
PJS3_k127_16348_54 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 354.0
PJS3_k127_16348_55 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008588 348.0
PJS3_k127_16348_56 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 343.0
PJS3_k127_16348_57 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 340.0
PJS3_k127_16348_58 Belongs to the GST superfamily K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009868 329.0
PJS3_k127_16348_59 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 332.0
PJS3_k127_16348_6 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 6.495e-290 905.0
PJS3_k127_16348_60 overlaps another CDS with the same product name K21019 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 331.0
PJS3_k127_16348_61 overlaps another CDS with the same product name K21019 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 327.0
PJS3_k127_16348_62 Mobile mystery protein B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 310.0
PJS3_k127_16348_63 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 309.0
PJS3_k127_16348_64 Glutathione S-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 298.0
PJS3_k127_16348_65 of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 300.0
PJS3_k127_16348_66 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 295.0
PJS3_k127_16348_67 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002521 283.0
PJS3_k127_16348_68 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002978 277.0
PJS3_k127_16348_69 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000003722 277.0
PJS3_k127_16348_7 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 8.422e-282 874.0
PJS3_k127_16348_70 membrane protein (homolog of Drosophila rhomboid) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000103 247.0
PJS3_k127_16348_71 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000000000000000000000000000004659 228.0
PJS3_k127_16348_72 Lactoylglutathione lyase K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000002254 219.0
PJS3_k127_16348_73 protein conserved in archaea - - - 0.00000000000000000000000000000000000000000000000000000000000000684 218.0
PJS3_k127_16348_74 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000000000000000000000000000000000000000001029 219.0
PJS3_k127_16348_75 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000001119 215.0
PJS3_k127_16348_76 transcriptional Regulator, LysR family - - - 0.0000000000000000000000000000000000000000000000000000000000004229 221.0
PJS3_k127_16348_77 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.0000000000000000000000000000000000000000000000000000002406 201.0
PJS3_k127_16348_78 PepSY-associated TM region - - - 0.000000000000000000000000000000000000000000000000000000675 201.0
PJS3_k127_16348_79 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000000000001199 181.0
PJS3_k127_16348_8 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 2.262e-276 856.0
PJS3_k127_16348_80 FMN_bind - - - 0.000000000000000000000000000000000000000000000006166 179.0
PJS3_k127_16348_81 Belongs to the ArsC family K00537 - 1.20.4.1 0.000000000000000000000000000000000000000000003536 166.0
PJS3_k127_16348_83 YaeQ - - - 0.000000000000000000000000000000000000000002422 161.0
PJS3_k127_16348_84 transcriptional regulator - - - 0.000000000000000000000000000000000000000002506 162.0
PJS3_k127_16348_85 Mobile mystery protein A - - - 0.000000000000000000000000000000000000000002909 160.0
PJS3_k127_16348_86 Protein of unknown function (DUF2834) - - - 0.000000000000000000000000000000000000633 144.0
PJS3_k127_16348_87 Thioredoxin K03671 - - 0.0000000000000000000000000000001232 128.0
PJS3_k127_16348_88 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000000000002072 126.0
PJS3_k127_16348_89 Tautomerase enzyme K01821 - 5.3.2.6 0.00000000000000000000000001563 109.0
PJS3_k127_16348_9 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 3.116e-269 844.0
PJS3_k127_16348_90 Cytochrome c K12263 - - 0.00000000000000000000000002898 114.0
PJS3_k127_16348_91 Protein of unknown function (DUF3301) - - - 0.00000000000000000000000005325 111.0
PJS3_k127_16348_92 Protein of unknown function (DUF2288) - - - 0.000000000000000000000000576 109.0
PJS3_k127_16348_93 COG2825 Outer membrane protein K06142 - - 0.000000000000000000000001751 109.0
PJS3_k127_16348_94 endonuclease containing a URI domain K07461 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.00000000000000000000001062 103.0
PJS3_k127_16348_96 Outer membrane protein beta-barrel domain - - - 0.0000000000002251 78.0
PJS3_k127_16348_98 Antirestriction protein (ArdA) - - - 0.000000000004374 66.0
PJS3_k127_16348_99 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000002108 62.0
PJS3_k127_1713375_0 exporters of the RND superfamily K07003 - - 0.0 1017.0
PJS3_k127_1713375_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.594e-291 900.0
PJS3_k127_1713375_10 Thioredoxin domain-containing protein K05838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 326.0
PJS3_k127_1713375_11 COG0739 Membrane proteins related to metalloendopeptidases K06194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001625 286.0
PJS3_k127_1713375_12 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006139,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008254,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009129,GO:0009131,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009173,GO:0009175,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030145,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042578,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046049,GO:0046050,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002554 284.0
PJS3_k127_1713375_13 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000000000000000004725 257.0
PJS3_k127_1713375_14 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000003501 244.0
PJS3_k127_1713375_15 sterol carrier protein - - - 0.000000000000000000000000000000000000000000000000000000001015 204.0
PJS3_k127_1713375_16 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000000000000000000000000000135 195.0
PJS3_k127_1713375_18 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.00000000000000000000000000000002057 128.0
PJS3_k127_1713375_19 transposase activity K07483 - - 0.00003259 46.0
PJS3_k127_1713375_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 4.267e-245 761.0
PJS3_k127_1713375_3 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 4.208e-231 735.0
PJS3_k127_1713375_4 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 484.0
PJS3_k127_1713375_5 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000357 392.0
PJS3_k127_1713375_6 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 381.0
PJS3_k127_1713375_7 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 339.0
PJS3_k127_1713375_8 membrane K08974 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 339.0
PJS3_k127_1713375_9 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 333.0
PJS3_k127_1791047_0 Acts as a magnesium transporter K06213 - - 4.574e-202 638.0
PJS3_k127_1791047_1 Protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 535.0
PJS3_k127_1791047_2 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 368.0
PJS3_k127_1791047_3 PTS fructose transporter subunit IIA K02806 - - 0.000000000000000000000000000000000000000000000000000000000000003498 220.0
PJS3_k127_1791047_4 Belongs to the UPF0307 family K09889 - - 0.000000000000000000000000000000000000001039 153.0
PJS3_k127_1791047_5 - - - - 0.00000000000000000000000000000009055 134.0
PJS3_k127_1791047_6 Phosphocarrier protein HPr K08485,K11189 - - 0.0000000000000000000000000006116 115.0
PJS3_k127_1917943_0 Allophanate hydrolase subunit 1 K01941 - 6.3.4.6 0.0 1892.0
PJS3_k127_1917943_1 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases K01457 - 3.5.1.54 1.898e-267 836.0
PJS3_k127_1917943_10 Domain of unknown function (DUF1989) K09967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 392.0
PJS3_k127_1917943_11 Domain of unknown function (DUF1989) K09967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 381.0
PJS3_k127_1917943_12 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006814 332.0
PJS3_k127_1917943_13 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000355 192.0
PJS3_k127_1917943_15 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000226 117.0
PJS3_k127_1917943_2 Thrombospondin type 3 repeat - - - 3.068e-202 655.0
PJS3_k127_1917943_3 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 573.0
PJS3_k127_1917943_4 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346 512.0
PJS3_k127_1917943_5 exporters of the RND superfamily K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003717 517.0
PJS3_k127_1917943_6 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005912 491.0
PJS3_k127_1917943_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 464.0
PJS3_k127_1917943_8 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 428.0
PJS3_k127_1917943_9 COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 409.0
PJS3_k127_2073275_0 E-set like domain - - - 0.000000000000000001471 98.0
PJS3_k127_2073275_1 - - - - 0.0000000006352 70.0
PJS3_k127_2073275_2 - - - - 0.000005968 55.0
PJS3_k127_242066_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K20455 - 4.2.1.117 0.0 1552.0
PJS3_k127_242066_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1425.0
PJS3_k127_242066_10 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 5.604e-241 748.0
PJS3_k127_242066_11 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.338e-240 750.0
PJS3_k127_242066_12 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03314 - - 1.238e-234 737.0
PJS3_k127_242066_13 unusual protein kinase - - - 4.409e-233 728.0
PJS3_k127_242066_14 ABC-type oligopeptide transport system, periplasmic component K13893 - - 3.744e-224 711.0
PJS3_k127_242066_15 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 5.653e-218 694.0
PJS3_k127_242066_16 protein conserved in bacteria K09788 - - 8.889e-212 662.0
PJS3_k127_242066_17 Belongs to the citrate synthase family K01659 GO:0003674,GO:0003824,GO:0004108,GO:0006082,GO:0006091,GO:0006113,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016740,GO:0016746,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0036440,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0046459,GO:0046912,GO:0050440,GO:0055114,GO:0071704 2.3.3.5 4.888e-211 660.0
PJS3_k127_242066_18 P-aminobenzoate N-oxygenase AurF - - - 1.775e-209 655.0
PJS3_k127_242066_19 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 - - 6.906e-205 650.0
PJS3_k127_242066_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1272.0
PJS3_k127_242066_20 Diguanylate cyclase - - - 9.207e-201 673.0
PJS3_k127_242066_21 Belongs to the ABC transporter superfamily K13896 - - 5.093e-197 628.0
PJS3_k127_242066_22 Histidine kinase - - - 7.631e-195 623.0
PJS3_k127_242066_23 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 583.0
PJS3_k127_242066_24 Glycerol-3-phosphate dehydrogenase K00111,K21054 - 1.1.1.402,1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000556 587.0
PJS3_k127_242066_25 COG3243 Poly(3-hydroxyalkanoate) synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000759 570.0
PJS3_k127_242066_26 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 573.0
PJS3_k127_242066_27 With YejAEF is involved in resistance to microcin C K13894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007504 562.0
PJS3_k127_242066_28 ABC transporter permease K13895 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 560.0
PJS3_k127_242066_29 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 563.0
PJS3_k127_242066_3 Long-chain fatty acid transport protein - - - 3.887e-290 898.0
PJS3_k127_242066_30 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 515.0
PJS3_k127_242066_31 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007756 520.0
PJS3_k127_242066_32 unusual protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 492.0
PJS3_k127_242066_33 Sh3 type 3 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 477.0
PJS3_k127_242066_35 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008702 476.0
PJS3_k127_242066_36 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 458.0
PJS3_k127_242066_37 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 453.0
PJS3_k127_242066_38 Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D- galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D- Glc4O) and L-glutamate K02805 GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005975,GO:0005976,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009246,GO:0009987,GO:0016051,GO:0016740,GO:0016769,GO:0019180,GO:0019842,GO:0030170,GO:0033692,GO:0034637,GO:0034645,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0046378,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901135,GO:1901137,GO:1901363,GO:1901576 2.6.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000759 454.0
PJS3_k127_242066_39 peptidase K04774 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 435.0
PJS3_k127_242066_4 Sulfite reductase K00381 - 1.8.1.2 2.315e-283 878.0
PJS3_k127_242066_40 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 426.0
PJS3_k127_242066_41 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 431.0
PJS3_k127_242066_42 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 415.0
PJS3_k127_242066_43 membrane protein required for spore maturation in B.subtilis K06374 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 420.0
PJS3_k127_242066_44 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 417.0
PJS3_k127_242066_45 alcohol dehydrogenase K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 410.0
PJS3_k127_242066_46 double-glycine peptidase K06992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 402.0
PJS3_k127_242066_47 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 391.0
PJS3_k127_242066_48 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 372.0
PJS3_k127_242066_49 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 372.0
PJS3_k127_242066_5 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog - - - 1.134e-279 876.0
PJS3_k127_242066_50 COG0147 Anthranilate para-aminobenzoate synthases component I K01665 - 2.6.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 367.0
PJS3_k127_242066_51 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 364.0
PJS3_k127_242066_52 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 362.0
PJS3_k127_242066_53 Belongs to the UPF0246 family K09861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 353.0
PJS3_k127_242066_54 Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins K07400 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 348.0
PJS3_k127_242066_55 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 346.0
PJS3_k127_242066_56 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007324 342.0
PJS3_k127_242066_57 GntR family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 336.0
PJS3_k127_242066_58 Major facilitator superfamily K07552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 346.0
PJS3_k127_242066_59 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 325.0
PJS3_k127_242066_6 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 6.92e-261 816.0
PJS3_k127_242066_60 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007705 315.0
PJS3_k127_242066_61 Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA K11391 - 2.1.1.174 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006964 318.0
PJS3_k127_242066_62 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 310.0
PJS3_k127_242066_64 Pseudouridine synthase K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007559 305.0
PJS3_k127_242066_65 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000841 280.0
PJS3_k127_242066_66 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007982 278.0
PJS3_k127_242066_67 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003848 274.0
PJS3_k127_242066_68 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000001613 269.0
PJS3_k127_242066_69 Transposase IS200 like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001743 262.0
PJS3_k127_242066_7 ABC1 family protein, ubiquinone biosynthesis protein K03688 - - 8.843e-253 790.0
PJS3_k127_242066_70 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004184 261.0
PJS3_k127_242066_71 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000005189 243.0
PJS3_k127_242066_72 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009581 245.0
PJS3_k127_242066_73 protein, possibly involved in aromatic compounds catabolism - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002611 240.0
PJS3_k127_242066_74 COG2230 Cyclopropane fatty acid synthase and related methyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000003617 233.0
PJS3_k127_242066_75 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000001006 234.0
PJS3_k127_242066_76 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000003159 228.0
PJS3_k127_242066_77 protein, possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000000000000000000000000000005622 202.0
PJS3_k127_242066_79 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000003027 194.0
PJS3_k127_242066_8 Belongs to the peptidase S41A family K03797 - 3.4.21.102 7.427e-249 786.0
PJS3_k127_242066_80 COG0500 SAM-dependent methyltransferases - - - 0.0000000000000000000000000000000000000000000000000003266 194.0
PJS3_k127_242066_81 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000000000000000000000000003421 193.0
PJS3_k127_242066_82 Transcriptional - - - 0.00000000000000000000000000000000000000000005093 166.0
PJS3_k127_242066_83 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000000000000006925 158.0
PJS3_k127_242066_84 Transposase IS200 like - - - 0.0000000000000000000000000000000000000001985 155.0
PJS3_k127_242066_86 alkylated DNA - - - 0.0000000000000000000000000000000001202 138.0
PJS3_k127_242066_87 Protein of unknown function (DUF805) - - - 0.00000000000000000000000000000000703 136.0
PJS3_k127_242066_88 - - - - 0.00000000000000000000000000001677 128.0
PJS3_k127_242066_89 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K05710 - - 0.000000000000000000000000005113 113.0
PJS3_k127_242066_9 Belongs to the glutamate synthase family - - - 2.599e-241 754.0
PJS3_k127_242066_91 Protein of unknown function (DUF1232) - - - 0.00000000000000000000001013 105.0
PJS3_k127_242066_92 Protein of unknown function (DUF2970) - - - 0.0000000000000003522 86.0
PJS3_k127_242066_96 2OG-Fe(II) oxygenase superfamily K10859 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008198,GO:0008283,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016705,GO:0016706,GO:0032451,GO:0033554,GO:0034641,GO:0035510,GO:0035511,GO:0035513,GO:0035515,GO:0035552,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043734,GO:0044237,GO:0044238,GO:0044260,GO:0044728,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051213,GO:0051716,GO:0055114,GO:0070988,GO:0070989,GO:0071704,GO:0080111,GO:0090304,GO:0140098,GO:1901360,GO:1990930 1.14.11.33 0.00005869 48.0
PJS3_k127_2429539_0 - - - - 0.0 1056.0
PJS3_k127_2429539_1 Secretory lipase - - - 1.986e-254 797.0
PJS3_k127_2429539_10 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 385.0
PJS3_k127_2429539_11 PFAM helix-turn-helix- domain containing protein, AraC type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 351.0
PJS3_k127_2429539_12 COG1073 Hydrolases of the alpha beta superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 311.0
PJS3_k127_2429539_13 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007227 291.0
PJS3_k127_2429539_14 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001795 250.0
PJS3_k127_2429539_15 Receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009867 267.0
PJS3_k127_2429539_16 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000000000000000000000000000001095 227.0
PJS3_k127_2429539_17 LexA-binding, inner membrane-associated putative hydrolase - - - 0.00000000000000000000000000000000000000000000000000004696 192.0
PJS3_k127_2429539_18 Tail Collar - - - 0.000000000000000000000000000000000000000000000002088 183.0
PJS3_k127_2429539_19 transcriptional regulator - - - 0.0000000000000000000000000000000000000006263 154.0
PJS3_k127_2429539_2 Monooxygenase, flavin-binding family - - - 3.617e-235 737.0
PJS3_k127_2429539_20 Immunity protein 35 - - - 0.0000000000000000000000000000000000008878 140.0
PJS3_k127_2429539_21 YecR-like lipoprotein - - - 0.00000000000000000000000000000000001481 137.0
PJS3_k127_2429539_22 - - - - 0.00000000000000000000000005201 116.0
PJS3_k127_2429539_23 - - - - 0.00000000000000000000007741 101.0
PJS3_k127_2429539_24 - - - - 0.00000000000000000000008126 100.0
PJS3_k127_2429539_25 Fatty acid hydroxylase superfamily - - - 0.00000000000002155 74.0
PJS3_k127_2429539_26 DDE domain - - - 0.00000000002664 64.0
PJS3_k127_2429539_27 Planctomycete cytochrome C - - - 0.000000004008 63.0
PJS3_k127_2429539_3 N-methylhydantoinase A acetone carboxylase, beta subunit K01469,K01473 - 3.5.2.14,3.5.2.9 2.758e-234 742.0
PJS3_k127_2429539_4 fatty acid desaturase K00508 - 1.14.19.3 3.979e-228 710.0
PJS3_k127_2429539_5 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - - - 4.367e-210 656.0
PJS3_k127_2429539_6 COG1398 Fatty-acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 558.0
PJS3_k127_2429539_7 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 537.0
PJS3_k127_2429539_8 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 473.0
PJS3_k127_2429539_9 Predicted metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006487 431.0
PJS3_k127_2493002_0 Chemotaxis protein histidine kinase and related K02487,K06596 - - 0.0 2394.0
PJS3_k127_2493002_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1532.0
PJS3_k127_2493002_10 Ammonium transporter K03320 - - 3.512e-228 712.0
PJS3_k127_2493002_100 protein conserved in bacteria - - - 0.00000000000000000004877 102.0
PJS3_k127_2493002_101 Domain of unknown function (DUF4136) - - - 0.0000000000000000005581 94.0
PJS3_k127_2493002_102 RDD family - - - 0.000000000000008553 80.0
PJS3_k127_2493002_103 Helix-turn-helix domain of transposase family ISL3 K07485 - - 0.00000000000001031 73.0
PJS3_k127_2493002_11 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 2.259e-224 702.0
PJS3_k127_2493002_12 twitching motility protein K02670 - - 3.493e-220 686.0
PJS3_k127_2493002_13 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 1.84e-217 679.0
PJS3_k127_2493002_14 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0000096,GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004478,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006556,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009069,GO:0009108,GO:0009116,GO:0009119,GO:0009987,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0019752,GO:0030554,GO:0030955,GO:0031420,GO:0032553,GO:0032555,GO:0032559,GO:0033353,GO:0034641,GO:0035639,GO:0036094,GO:0042278,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046872,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1901605,GO:1901657 2.5.1.6 3.364e-215 672.0
PJS3_k127_2493002_15 COG0191 Fructose tagatose bisphosphate aldolase K01624 - 4.1.2.13 3.925e-210 655.0
PJS3_k127_2493002_16 twitching motility protein K02669 - - 4.449e-209 652.0
PJS3_k127_2493002_17 Fatty acid desaturase K00496 GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016491,GO:0016705,GO:0016713,GO:0018685,GO:0043446,GO:0043448,GO:0044237,GO:0044248,GO:0055114,GO:0071704,GO:1901575 1.14.15.3 6.728e-201 632.0
PJS3_k127_2493002_18 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 2.545e-198 623.0
PJS3_k127_2493002_19 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 5.572e-197 622.0
PJS3_k127_2493002_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1125.0
PJS3_k127_2493002_20 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) - - - 6.359e-197 622.0
PJS3_k127_2493002_21 alcohol dehydrogenase K08325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 603.0
PJS3_k127_2493002_22 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 560.0
PJS3_k127_2493002_23 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 540.0
PJS3_k127_2493002_24 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 536.0
PJS3_k127_2493002_25 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005267,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015267,GO:0015318,GO:0015672,GO:0016020,GO:0016021,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031224,GO:0031226,GO:0031420,GO:0034220,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0046983,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 545.0
PJS3_k127_2493002_26 2-hydroxychromene-2-carboxylate isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 542.0
PJS3_k127_2493002_27 Dihydroorotase multifunctional complex type K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005046 542.0
PJS3_k127_2493002_28 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 528.0
PJS3_k127_2493002_29 Zn-dependent hydrolases of the beta-lactamase fold K13985 - 3.1.4.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 491.0
PJS3_k127_2493002_3 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1084.0
PJS3_k127_2493002_30 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134,K03472 - 1.2.1.12,1.2.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 479.0
PJS3_k127_2493002_31 Glutathione S-transferase K07393 GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016491,GO:0016667,GO:0016672,GO:0016740,GO:0016765,GO:0042221,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.8.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 472.0
PJS3_k127_2493002_32 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 466.0
PJS3_k127_2493002_33 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007218 460.0
PJS3_k127_2493002_34 COG2267 Lysophospholipase K01048 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005088 445.0
PJS3_k127_2493002_35 protein conserved in bacteria K09859 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 449.0
PJS3_k127_2493002_36 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 437.0
PJS3_k127_2493002_37 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K06597 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000596 434.0
PJS3_k127_2493002_38 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 432.0
PJS3_k127_2493002_39 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005049 423.0
PJS3_k127_2493002_4 chemotaxis protein K02660 - - 1.571e-313 972.0
PJS3_k127_2493002_40 COG1352 Methylase of chemotaxis methyl-accepting proteins K00575,K02661 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 417.0
PJS3_k127_2493002_41 transcriptional regulator K13633 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 419.0
PJS3_k127_2493002_42 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 409.0
PJS3_k127_2493002_43 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 385.0
PJS3_k127_2493002_44 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 383.0
PJS3_k127_2493002_45 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 368.0
PJS3_k127_2493002_46 ArsR family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 370.0
PJS3_k127_2493002_47 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008278 366.0
PJS3_k127_2493002_48 COG0303 Molybdopterin biosynthesis enzyme K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008251 365.0
PJS3_k127_2493002_49 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 363.0
PJS3_k127_2493002_5 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 1.077e-266 825.0
PJS3_k127_2493002_50 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 353.0
PJS3_k127_2493002_51 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004898 351.0
PJS3_k127_2493002_52 COG3417 Collagen-binding surface adhesin SpaP (antigen I II family) K07337 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009753 331.0
PJS3_k127_2493002_53 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015098,GO:0015103,GO:0015318,GO:0015399,GO:0015405,GO:0015412,GO:0015689,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0099133 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 340.0
PJS3_k127_2493002_54 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 327.0
PJS3_k127_2493002_55 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 321.0
PJS3_k127_2493002_56 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 310.0
PJS3_k127_2493002_57 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 301.0
PJS3_k127_2493002_58 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 300.0
PJS3_k127_2493002_59 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 295.0
PJS3_k127_2493002_6 found to be peripherally associated with the inner membrane in Escherichia coli K03499 - - 1.931e-251 780.0
PJS3_k127_2493002_60 Curli production assembly/transport component CsgG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 304.0
PJS3_k127_2493002_61 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 291.0
PJS3_k127_2493002_62 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 285.0
PJS3_k127_2493002_63 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005554 278.0
PJS3_k127_2493002_64 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008137 280.0
PJS3_k127_2493002_65 hydrolase K20862 - 3.1.3.102,3.1.3.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001149 278.0
PJS3_k127_2493002_66 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004404 271.0
PJS3_k127_2493002_67 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001196 262.0
PJS3_k127_2493002_68 CheW-like domain K06598 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000152 255.0
PJS3_k127_2493002_69 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006426 261.0
PJS3_k127_2493002_7 flavoprotein involved in K transport - - - 3.943e-251 783.0
PJS3_k127_2493002_70 May be involved in the biosynthesis of molybdopterin K03638 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0042802,GO:0044424,GO:0044444,GO:0044464 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000061 252.0
PJS3_k127_2493002_71 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001742 247.0
PJS3_k127_2493002_72 response regulator K02657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007092 241.0
PJS3_k127_2493002_73 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007522 244.0
PJS3_k127_2493002_74 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity K01118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008907 247.0
PJS3_k127_2493002_75 Chemotaxis signal transduction protein K02659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001181 243.0
PJS3_k127_2493002_76 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000005349 241.0
PJS3_k127_2493002_77 COG0784 FOG CheY-like receiver K02658 - - 0.0000000000000000000000000000000000000000000000000000000000000000007143 228.0
PJS3_k127_2493002_78 Integral membrane protein K02221 - - 0.0000000000000000000000000000000000000000000000000000000000000009923 223.0
PJS3_k127_2493002_79 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000002287 216.0
PJS3_k127_2493002_8 FAD linked oxidase - - - 2.834e-248 772.0
PJS3_k127_2493002_80 uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000001523 211.0
PJS3_k127_2493002_81 molybdenum ABC transporter, periplasmic K02020 - - 0.0000000000000000000000000000000000000000000000000000000005981 212.0
PJS3_k127_2493002_82 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000000000000000000000000004806 191.0
PJS3_k127_2493002_83 Uncharacterized protein conserved in bacteria (DUF2057) K09909 - - 0.00000000000000000000000000000000000000000000000000001325 196.0
PJS3_k127_2493002_84 membrane - - - 0.0000000000000000000000000000000000000000000000000001179 188.0
PJS3_k127_2493002_85 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000002757 178.0
PJS3_k127_2493002_86 membrane - - - 0.00000000000000000000000000000000000000000000001883 175.0
PJS3_k127_2493002_87 Protein of unknown function (DUF1425) - - - 0.000000000000000000000000000000000000000000000173 172.0
PJS3_k127_2493002_88 transcriptional regulator K19591 - - 0.000000000000000000000000000000000000000000004677 166.0
PJS3_k127_2493002_89 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000001287 177.0
PJS3_k127_2493002_9 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 8.863e-231 721.0
PJS3_k127_2493002_90 FR47-like protein - - - 0.0000000000000000000000000000000000000000000246 175.0
PJS3_k127_2493002_91 Protein of unknown function (DUF523) - - - 0.00000000000000000000000000000000000000001285 161.0
PJS3_k127_2493002_92 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000000009785 143.0
PJS3_k127_2493002_93 DNA-binding protein VF530 - GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000005596 135.0
PJS3_k127_2493002_94 protein conserved in bacteria - - - 0.0000000000000000000000000000000002512 136.0
PJS3_k127_2493002_95 - - - - 0.0000000000000000000000000003955 124.0
PJS3_k127_2493002_96 membrane - - - 0.00000000000000000000000001052 112.0
PJS3_k127_2493002_97 DUF167 K09131 - - 0.000000000000000000000001328 106.0
PJS3_k127_2493002_98 BPTI/Kunitz family of serine protease inhibitors. - - - 0.0000000000000000000001574 100.0
PJS3_k127_2493002_99 COG2104 Sulfur transfer protein involved in thiamine biosynthesis K03154 - - 0.0000000000000000000009614 98.0
PJS3_k127_260821_0 in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon K13634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 584.0
PJS3_k127_260821_1 5'-nucleotidase K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004771 467.0
PJS3_k127_260821_2 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 421.0
PJS3_k127_260821_3 phosphoserine phosphatase K02203 - 2.7.1.39,3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 351.0
PJS3_k127_260821_4 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 334.0
PJS3_k127_260821_5 E-set like domain - - - 0.00000000000000000000000000000000000000000000000000000000000008566 233.0
PJS3_k127_260821_6 heparin binding K03646 - - 0.00000000000000000000000000000000000000000000000000000004201 202.0
PJS3_k127_260821_7 Chaperone - - - 0.000000000000000000000000000004425 128.0
PJS3_k127_2839002_0 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362 - 1.7.1.15 0.0 1363.0
PJS3_k127_2839002_1 Fibronectin type 3 domain - - - 0.0 1290.0
PJS3_k127_2839002_10 Domain of unknown function (DUF3332) - - - 0.00000000000000000000000000000000000000000000000000000000016 207.0
PJS3_k127_2839002_11 Nitrite reductase K00363 - 1.7.1.15 0.0000000000000000000000000000000000000003389 151.0
PJS3_k127_2839002_14 ig-like, plexins, transcription factors - - - 0.00000002962 69.0
PJS3_k127_2839002_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1032.0
PJS3_k127_2839002_3 Nitrate nitrite transporter K02575 - - 6.29e-230 724.0
PJS3_k127_2839002_4 RHS protein - - - 5.978e-216 726.0
PJS3_k127_2839002_5 Serine Threonine protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 572.0
PJS3_k127_2839002_6 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 537.0
PJS3_k127_2839002_7 COG1943 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008144 468.0
PJS3_k127_2839002_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 433.0
PJS3_k127_2839002_9 Pyridine nucleotide-disulphide oxidoreductase K00362,K05297 - 1.18.1.1,1.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 405.0
PJS3_k127_2885908_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044262,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046459,GO:0046487,GO:0046872,GO:0046914,GO:0047456,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 0.0 1277.0
PJS3_k127_2885908_1 COG0457 FOG TPR repeat - - - 0.0 1244.0
PJS3_k127_2885908_10 TRAP transporter T-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 386.0
PJS3_k127_2885908_11 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0043167,GO:0043169,GO:0044237,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 361.0
PJS3_k127_2885908_12 sterol desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 366.0
PJS3_k127_2885908_13 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003412 340.0
PJS3_k127_2885908_14 Putative aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 323.0
PJS3_k127_2885908_15 membrane protein (homolog of Drosophila rhomboid) K02441 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 304.0
PJS3_k127_2885908_16 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005859 299.0
PJS3_k127_2885908_17 Elongation factor P K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004386 268.0
PJS3_k127_2885908_18 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000002461 256.0
PJS3_k127_2885908_19 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000902 216.0
PJS3_k127_2885908_2 Tetratricopeptide repeat - - - 5.341e-250 785.0
PJS3_k127_2885908_20 sterol desaturase - - - 0.000000000000000000000000000000000000000000000000000000168 204.0
PJS3_k127_2885908_21 - - - - 0.000000000000000000000000000000000000000000000000000002238 195.0
PJS3_k127_2885908_22 Repressor involved in choline regulation of the bet genes K02167 - - 0.00000000000000000000000000000000000000000000000005411 186.0
PJS3_k127_2885908_23 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000004078 191.0
PJS3_k127_2885908_24 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.000000000000000000000000000000000000000000981 167.0
PJS3_k127_2885908_26 permease - - - 0.0000000000000000000000000000000000000002851 162.0
PJS3_k127_2885908_27 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000002273 121.0
PJS3_k127_2885908_28 Iron-binding zinc finger CDGSH type - - - 0.00000000000000000004982 93.0
PJS3_k127_2885908_3 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 1.606e-223 696.0
PJS3_k127_2885908_30 cyclic nucleotide binding K10914 - - 0.0000000000000000237 89.0
PJS3_k127_2885908_31 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000005757 63.0
PJS3_k127_2885908_33 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.00001791 49.0
PJS3_k127_2885908_4 COG1960 Acyl-CoA dehydrogenases - - - 2.651e-217 680.0
PJS3_k127_2885908_5 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 2.037e-213 669.0
PJS3_k127_2885908_6 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 1.909e-206 647.0
PJS3_k127_2885908_7 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007905 465.0
PJS3_k127_2885908_8 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 444.0
PJS3_k127_2885908_9 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 386.0
PJS3_k127_2888237_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1071.0
PJS3_k127_2888237_1 Acetyl-CoA hydrolase - - - 4.26e-247 784.0
PJS3_k127_2888237_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000007719 243.0
PJS3_k127_2888237_11 Domain of unknown function (DUF4282) - - - 0.000000000000000000000000000000000000000000000000000000000788 206.0
PJS3_k127_2888237_12 - - - - 0.000000000000000000000000000000000000000000000000000000009683 205.0
PJS3_k127_2888237_13 Belongs to the small heat shock protein (HSP20) family K04080 - - 0.0000000000000000000000000000000000000000000000000000001053 198.0
PJS3_k127_2888237_14 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.00000000000000000000000000000000000000000005222 174.0
PJS3_k127_2888237_15 Transcriptional K10917 - - 0.00000000000000000000000000000000000000000169 162.0
PJS3_k127_2888237_16 protein conserved in bacteria K09977 - - 0.0000000000000000000000000000000000001974 152.0
PJS3_k127_2888237_17 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000000000000000000000000004496 141.0
PJS3_k127_2888237_18 Protein of unknown function (DUF1272) K09984 - - 0.0000000000000000000000000000000000007536 140.0
PJS3_k127_2888237_19 Protein of unknown function (DUF2834) - - - 0.0000000000000000000000000000000000914 136.0
PJS3_k127_2888237_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 2.837e-217 677.0
PJS3_k127_2888237_20 BrnA antitoxin of type II toxin-antitoxin system - - - 0.00000000000000000000000000000003388 128.0
PJS3_k127_2888237_21 Tryptophan-rich protein (DUF2389) - - - 0.0000000000000000000000000005539 114.0
PJS3_k127_2888237_22 HNH endonuclease - - - 0.00000000000000000000000007687 115.0
PJS3_k127_2888237_23 Integrase catalytic - - - 0.0000000000000000000004531 98.0
PJS3_k127_2888237_24 - - - - 0.0003851 45.0
PJS3_k127_2888237_3 GH3 auxin-responsive promoter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004598 556.0
PJS3_k127_2888237_4 Belongs to the UPF0061 (SELO) family K08997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989 529.0
PJS3_k127_2888237_5 Protein of unknown function (DUF2804) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 454.0
PJS3_k127_2888237_6 chlorophyll binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 372.0
PJS3_k127_2888237_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 336.0
PJS3_k127_2888237_8 2OG-Fe(II) oxygenase K07394 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 297.0
PJS3_k127_2888237_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002556 256.0
PJS3_k127_3166245_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 2.3e-204 651.0
PJS3_k127_3166245_1 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 4.484e-196 616.0
PJS3_k127_3166245_10 May be involved in the folding of the extracellular lipase during its passage through the periplasm - - - 0.000000000000000000000000000000000000000000000000000000000000000000102 243.0
PJS3_k127_3166245_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000009803 214.0
PJS3_k127_3166245_12 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000000000000000000000000001914 209.0
PJS3_k127_3166245_13 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000000000000002767 162.0
PJS3_k127_3166245_14 Ion channel - - - 0.0000000000000000000000000007499 118.0
PJS3_k127_3166245_15 Bacterioferritin-associated ferredoxin K02192 - - 0.000000000000000000001561 95.0
PJS3_k127_3166245_2 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 491.0
PJS3_k127_3166245_3 alcohol dehydrogenase K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 459.0
PJS3_k127_3166245_4 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134,K03472 - 1.2.1.12,1.2.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 432.0
PJS3_k127_3166245_5 with the alpha beta hydrolase fold K01046 - 3.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 428.0
PJS3_k127_3166245_6 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 423.0
PJS3_k127_3166245_7 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008978 352.0
PJS3_k127_3166245_8 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 297.0
PJS3_k127_3166245_9 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006335 265.0
PJS3_k127_324289_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1247.0
PJS3_k127_324289_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1189.0
PJS3_k127_324289_10 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008223 548.0
PJS3_k127_324289_11 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 503.0
PJS3_k127_324289_13 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000436 507.0
PJS3_k127_324289_14 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007909 487.0
PJS3_k127_324289_15 ( 3 oxidation state) methyltransferase K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 483.0
PJS3_k127_324289_16 Fe-S oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 465.0
PJS3_k127_324289_17 COG0642 Signal transduction histidine kinase K07641 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 464.0
PJS3_k127_324289_18 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 441.0
PJS3_k127_324289_19 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 434.0
PJS3_k127_324289_2 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0 1075.0
PJS3_k127_324289_20 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 416.0
PJS3_k127_324289_21 Nad-dependent epimerase dehydratase K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 407.0
PJS3_k127_324289_22 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 379.0
PJS3_k127_324289_23 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005077 359.0
PJS3_k127_324289_24 Dyp-type peroxidase family K07223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 361.0
PJS3_k127_324289_25 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 357.0
PJS3_k127_324289_26 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 324.0
PJS3_k127_324289_27 CorA-like Mg2+ transporter protein K16074 GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0015562,GO:0016020,GO:0016021,GO:0022857,GO:0022883,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046583,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 322.0
PJS3_k127_324289_28 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004103 301.0
PJS3_k127_324289_29 Histidine Phosphotransfer domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 325.0
PJS3_k127_324289_3 helicase K03722 - 3.6.4.12 4.993e-283 882.0
PJS3_k127_324289_30 Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle K00564 - 2.1.1.172 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 306.0
PJS3_k127_324289_31 Inner membrane protein CreD K06143 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005985 310.0
PJS3_k127_324289_32 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009441 269.0
PJS3_k127_324289_33 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001921 263.0
PJS3_k127_324289_34 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001317 261.0
PJS3_k127_324289_35 START domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001078 247.0
PJS3_k127_324289_36 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001126 242.0
PJS3_k127_324289_37 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07663 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005649 243.0
PJS3_k127_324289_38 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000000000000000002299 226.0
PJS3_k127_324289_39 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.00000000000000000000000000000000000000000000000000000000000005238 224.0
PJS3_k127_324289_4 Flavin-binding monooxygenase-like - - - 1.21e-282 873.0
PJS3_k127_324289_40 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000000005563 213.0
PJS3_k127_324289_41 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000006955 214.0
PJS3_k127_324289_42 protein conserved in bacteria K09938 - - 0.0000000000000000000000000000000000000000000000000000000001577 218.0
PJS3_k127_324289_43 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000001883 208.0
PJS3_k127_324289_44 Belongs to the DnaA family. HdA subfamily K10763 - - 0.000000000000000000000000000000000000000000000000000000008688 206.0
PJS3_k127_324289_45 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000001613 207.0
PJS3_k127_324289_46 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000003926 201.0
PJS3_k127_324289_47 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000004937 201.0
PJS3_k127_324289_48 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000006411 199.0
PJS3_k127_324289_49 Peptidase M22 K14742 - - 0.000000000000000000000000000000000000000000000006988 182.0
PJS3_k127_324289_5 esterase of the alpha-beta hydrolase superfamily K07001 - - 1.428e-235 737.0
PJS3_k127_324289_50 LexA-binding, inner membrane-associated putative hydrolase - - - 0.000000000000000000000000000000000000000000002529 170.0
PJS3_k127_324289_51 Protein of unknown function (DUF541) K09807 - - 0.000000000000000000000000000000000001716 147.0
PJS3_k127_324289_52 protein conserved in bacteria K09931 - - 0.00000000000000000000000000000000001466 144.0
PJS3_k127_324289_53 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019720,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061603,GO:0070568,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902757,GO:1902758 2.7.7.77 0.00000000000000000000000000000001927 133.0
PJS3_k127_324289_54 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.0000000000000000000000000004236 115.0
PJS3_k127_324289_56 Modulates RecA activity K03565 - - 0.00000000000000000000008527 108.0
PJS3_k127_324289_57 FOG HPt domain K20976 - - 0.000000000000000002593 88.0
PJS3_k127_324289_6 Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation K00322 - 1.6.1.1 1.946e-219 689.0
PJS3_k127_324289_60 Pilus assembly protein PilZ - - - 0.000001699 55.0
PJS3_k127_324289_62 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.0004082 44.0
PJS3_k127_324289_7 Belongs to the aspartokinase family K00928 - 2.7.2.4 3.894e-210 658.0
PJS3_k127_324289_8 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 608.0
PJS3_k127_324289_9 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006386 600.0
PJS3_k127_3290649_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1612.0
PJS3_k127_3290649_1 Alpha beta hydrolase - - - 2.333e-284 881.0
PJS3_k127_3290649_10 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 286.0
PJS3_k127_3290649_11 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001428 284.0
PJS3_k127_3290649_12 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000002701 229.0
PJS3_k127_3290649_13 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000000000000001075 213.0
PJS3_k127_3290649_14 chemotaxis K03406 - - 0.0000000000000000000000000000000000000000000000000000002664 212.0
PJS3_k127_3290649_15 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000001796 166.0
PJS3_k127_3290649_16 Methyltransferase, chemotaxis proteins - - - 0.000000000000000000000000000000000000003004 162.0
PJS3_k127_3290649_17 consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000002691 154.0
PJS3_k127_3290649_18 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000149 137.0
PJS3_k127_3290649_19 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000000002903 133.0
PJS3_k127_3290649_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 7.568e-239 758.0
PJS3_k127_3290649_20 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000000000007185 124.0
PJS3_k127_3290649_21 protein conserved in bacteria K09954 - - 0.00000000000000000000000000001031 120.0
PJS3_k127_3290649_22 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000003337 117.0
PJS3_k127_3290649_23 Putative 2OG-Fe(II) oxygenase - - - 0.00000000000000000000000352 110.0
PJS3_k127_3290649_24 - - - - 0.0000000000000000000002543 101.0
PJS3_k127_3290649_25 COG1078 HD superfamily K06885 - - 0.00000000000000000003358 106.0
PJS3_k127_3290649_26 pathogenesis K12287 - - 0.0000000000000000001013 105.0
PJS3_k127_3290649_27 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.000000000000004688 77.0
PJS3_k127_3290649_28 Pfam CheW-like K03408 - - 0.0000000001999 73.0
PJS3_k127_3290649_29 serine threonine protein kinase K08884,K12132 GO:0000270,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009605,GO:0009607,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0010698,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0022603,GO:0022604,GO:0030145,GO:0030203,GO:0030234,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032091,GO:0034645,GO:0036211,GO:0040007,GO:0042304,GO:0042546,GO:0042802,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043388,GO:0043393,GO:0043412,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046872,GO:0046890,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051055,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0075136,GO:0080090,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.11.1 0.0000000007542 72.0
PJS3_k127_3290649_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 2.249e-231 734.0
PJS3_k127_3290649_30 - - - - 0.0000001379 59.0
PJS3_k127_3290649_4 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 3.775e-198 639.0
PJS3_k127_3290649_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007815 473.0
PJS3_k127_3290649_6 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007276 453.0
PJS3_k127_3290649_7 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 391.0
PJS3_k127_3290649_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007894 385.0
PJS3_k127_3290649_9 Signal transducing histidine kinase, homodimeric K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 398.0
PJS3_k127_33511_0 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002293 244.0
PJS3_k127_33511_1 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000000000000000000000000004812 221.0
PJS3_k127_33511_2 Phospholipid methyltransferase K21310 - 2.1.1.334 0.00000000000000000000000000000000000000000000000000000000001693 216.0
PJS3_k127_33511_3 - - - - 0.000000000000000000000000000000000000006939 149.0
PJS3_k127_33511_4 MAPEG family - - - 0.0000000000000000000000000000003314 126.0
PJS3_k127_33511_5 Tetratricopeptide repeats K11935 - - 0.0001019 55.0
PJS3_k127_3403911_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 0.0 1806.0
PJS3_k127_3403911_1 Histidine kinase - - - 0.0 1335.0
PJS3_k127_3403911_10 carbamoyl-phosphate synthetase glutamine chain K01956 - 6.3.5.5 4.911e-196 617.0
PJS3_k127_3403911_11 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 3.882e-195 615.0
PJS3_k127_3403911_12 COG0038 Chloride channel protein EriC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 597.0
PJS3_k127_3403911_13 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 575.0
PJS3_k127_3403911_14 Alkaline phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 563.0
PJS3_k127_3403911_15 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 554.0
PJS3_k127_3403911_16 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 520.0
PJS3_k127_3403911_17 Peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000821 512.0
PJS3_k127_3403911_18 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 488.0
PJS3_k127_3403911_19 belongs to the carbohydrate kinase PfkB family K00847,K00892 - 2.7.1.4,2.7.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 481.0
PJS3_k127_3403911_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1103.0
PJS3_k127_3403911_20 Aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007313 445.0
PJS3_k127_3403911_21 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 421.0
PJS3_k127_3403911_22 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 394.0
PJS3_k127_3403911_23 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 386.0
PJS3_k127_3403911_24 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 359.0
PJS3_k127_3403911_25 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 340.0
PJS3_k127_3403911_26 Belongs to the SfsA family K06206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 334.0
PJS3_k127_3403911_27 COG1428 Deoxynucleoside kinases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 319.0
PJS3_k127_3403911_28 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 314.0
PJS3_k127_3403911_29 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008625 308.0
PJS3_k127_3403911_3 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1034.0
PJS3_k127_3403911_30 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008497 304.0
PJS3_k127_3403911_31 phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005804 301.0
PJS3_k127_3403911_32 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001505 283.0
PJS3_k127_3403911_33 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002748 277.0
PJS3_k127_3403911_34 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000007751 240.0
PJS3_k127_3403911_35 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000000008086 236.0
PJS3_k127_3403911_36 membrane K08973 - - 0.00000000000000000000000000000000000000000000000000000000000000000004466 234.0
PJS3_k127_3403911_37 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000001731 231.0
PJS3_k127_3403911_38 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000000000000000000000000000816 215.0
PJS3_k127_3403911_39 - - - - 0.0000000000000000000000000000000000000000000000000000000000007975 218.0
PJS3_k127_3403911_4 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 2.061e-314 977.0
PJS3_k127_3403911_40 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000000000000000001148 195.0
PJS3_k127_3403911_41 COG0671 Membrane-associated phospholipid phosphatase K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000004706 189.0
PJS3_k127_3403911_42 COG1664 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000000000000000000009408 184.0
PJS3_k127_3403911_43 iron-sulfur cluster insertion protein erpA K15724 - - 0.0000000000000000000000000000000000000000000000002632 178.0
PJS3_k127_3403911_44 transmembrane signaling receptor activity - - - 0.000000000000000000000000000000000000000000000001248 184.0
PJS3_k127_3403911_45 Rieske 2Fe-2S - - - 0.00000000000000000000000000000000000000000006754 163.0
PJS3_k127_3403911_46 RNA-binding protein containing KH domain, possibly ribosomal protein K07574 - - 0.0000000000000000000000000000000000000000002917 160.0
PJS3_k127_3403911_47 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 GO:0000287,GO:0003674,GO:0003824,GO:0003848,GO:0005488,GO:0016740,GO:0016772,GO:0016778,GO:0043167,GO:0043169,GO:0046872 2.7.6.3 0.00000000000000000000000000000000000000005488 157.0
PJS3_k127_3403911_48 Preprotein translocase K03075 - - 0.0000000000000000000000000000000000001088 145.0
PJS3_k127_3403911_49 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000001125 140.0
PJS3_k127_3403911_5 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0036094,GO:0043021,GO:0043024,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 1.426e-302 953.0
PJS3_k127_3403911_50 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000001773 126.0
PJS3_k127_3403911_51 MFS transporter - - - 0.00000000000000000000001213 103.0
PJS3_k127_3403911_52 - - - - 0.0000000007165 60.0
PJS3_k127_3403911_6 Participates in both transcription termination and antitermination K02600 - - 2.707e-262 814.0
PJS3_k127_3403911_7 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 6.648e-229 735.0
PJS3_k127_3403911_8 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 3.318e-217 680.0
PJS3_k127_3403911_9 hydroxymethylglutaryl-CoA reductase K00021 - 1.1.1.34 6.795e-202 634.0
PJS3_k127_3427043_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1255.0
PJS3_k127_3427043_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1222.0
PJS3_k127_3427043_10 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 1.225e-228 717.0
PJS3_k127_3427043_100 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000008177 108.0
PJS3_k127_3427043_101 Iron-regulated protein - - - 0.00000000000000000000002644 113.0
PJS3_k127_3427043_102 - - - - 0.00000000000000000001462 106.0
PJS3_k127_3427043_103 - - - - 0.00000002131 60.0
PJS3_k127_3427043_105 Ankyrin repeat K10799 GO:0000209,GO:0000226,GO:0000228,GO:0000242,GO:0000278,GO:0000723,GO:0000781,GO:0000784,GO:0000922,GO:0003674,GO:0003824,GO:0003950,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005654,GO:0005694,GO:0005737,GO:0005794,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006471,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007063,GO:0007088,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010948,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0016310,GO:0016567,GO:0016604,GO:0016740,GO:0016757,GO:0016763,GO:0018105,GO:0018107,GO:0018193,GO:0018209,GO:0018210,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0022402,GO:0022607,GO:0023051,GO:0023056,GO:0030111,GO:0030162,GO:0030177,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032200,GO:0032204,GO:0032205,GO:0032206,GO:0032210,GO:0032212,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033365,GO:0034091,GO:0034092,GO:0034182,GO:0034183,GO:0034502,GO:0034613,GO:0034641,GO:0035264,GO:0036211,GO:0040007,GO:0040008,GO:0040014,GO:0042176,GO:0042393,GO:0042592,GO:0043085,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043392,GO:0043412,GO:0044085,GO:0044087,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044451,GO:0044454,GO:0044464,GO:0045732,GO:0045786,GO:0045839,GO:0045862,GO:0045875,GO:0045893,GO:0045930,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046872,GO:0046914,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048589,GO:0048638,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051052,GO:0051053,GO:0051054,GO:0051098,GO:0051100,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051225,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051276,GO:0051338,GO:0051347,GO:0051641,GO:0051726,GO:0051783,GO:0051784,GO:0051972,GO:0051973,GO:0051983,GO:0051985,GO:0060249,GO:0060255,GO:0060828,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070198,GO:0070212,GO:0070213,GO:0070647,GO:0070727,GO:0070925,GO:0071704,GO:0071840,GO:0072686,GO:0080090,GO:0090263,GO:0090304,GO:0090364,GO:0097110,GO:0097431,GO:0098687,GO:1901360,GO:1901564,GO:1902680,GO:1902850,GO:1903047,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903506,GO:1903508,GO:1904353,GO:1904355,GO:1904356,GO:1904357,GO:1904358,GO:1904742,GO:1904743,GO:1904907,GO:1904908,GO:2000058,GO:2000060,GO:2000112,GO:2000278,GO:2000573,GO:2001141,GO:2001251,GO:2001252 2.4.2.30 0.000001502 61.0
PJS3_k127_3427043_107 - - - - 0.000749 52.0
PJS3_k127_3427043_11 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 3.531e-221 705.0
PJS3_k127_3427043_12 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 9.938e-219 685.0
PJS3_k127_3427043_13 Ammonium Transporter K03320 - - 1.079e-217 681.0
PJS3_k127_3427043_14 phosphate transporter K03306 - - 9.718e-202 634.0
PJS3_k127_3427043_15 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 8.544e-194 612.0
PJS3_k127_3427043_16 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 539.0
PJS3_k127_3427043_17 SAM-dependent K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 533.0
PJS3_k127_3427043_18 ATPase with chaperone activity K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002719 538.0
PJS3_k127_3427043_19 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 523.0
PJS3_k127_3427043_2 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 0.0 1172.0
PJS3_k127_3427043_20 Heat shock 70 kDa protein K04045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 526.0
PJS3_k127_3427043_21 aminoglycoside phosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 515.0
PJS3_k127_3427043_22 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 502.0
PJS3_k127_3427043_23 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009641 493.0
PJS3_k127_3427043_24 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 499.0
PJS3_k127_3427043_25 COG0578 Glycerol-3-phosphate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008943 490.0
PJS3_k127_3427043_26 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 480.0
PJS3_k127_3427043_27 heptosyltransferase K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 482.0
PJS3_k127_3427043_28 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 462.0
PJS3_k127_3427043_29 COG0859 ADP-heptose LPS heptosyltransferase K02841 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 462.0
PJS3_k127_3427043_3 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1127.0
PJS3_k127_3427043_30 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 453.0
PJS3_k127_3427043_31 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008361 444.0
PJS3_k127_3427043_32 Catalyzes the addition of the first glucose residue to the LPS core K02844 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008194,GO:0008610,GO:0008653,GO:0008919,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0046401,GO:0046527,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009833 450.0
PJS3_k127_3427043_33 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 447.0
PJS3_k127_3427043_34 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 428.0
PJS3_k127_3427043_35 Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core K02848 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 430.0
PJS3_k127_3427043_36 fatty acid hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 428.0
PJS3_k127_3427043_37 signal transduction protein with a C-terminal ATPase domain K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008284 428.0
PJS3_k127_3427043_38 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 417.0
PJS3_k127_3427043_39 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 412.0
PJS3_k127_3427043_4 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0 1099.0
PJS3_k127_3427043_40 COG0330 Membrane protease subunits stomatin prohibitin homologs - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007341 417.0
PJS3_k127_3427043_41 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008227 390.0
PJS3_k127_3427043_42 consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 386.0
PJS3_k127_3427043_43 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005805 386.0
PJS3_k127_3427043_44 Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (lauroyl)-lipid IV(A) K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 385.0
PJS3_k127_3427043_45 mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007288 379.0
PJS3_k127_3427043_46 Aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 365.0
PJS3_k127_3427043_47 Response regulator of the LytR AlgR family K02477,K08083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 359.0
PJS3_k127_3427043_48 biosynthesis protein HemY K02498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 363.0
PJS3_k127_3427043_49 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046 - 1.1.1.69 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 352.0
PJS3_k127_3427043_5 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.0 1053.0
PJS3_k127_3427043_50 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 362.0
PJS3_k127_3427043_51 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 347.0
PJS3_k127_3427043_52 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 341.0
PJS3_k127_3427043_53 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 346.0
PJS3_k127_3427043_54 COG1392 Phosphate transport regulator (distant homolog of PhoU) K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004138 325.0
PJS3_k127_3427043_55 Glycosyltransferase like family 2 K00786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 326.0
PJS3_k127_3427043_56 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 316.0
PJS3_k127_3427043_57 pseudouridine methyltransferase K16317 - 2.1.1.257 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 306.0
PJS3_k127_3427043_58 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 312.0
PJS3_k127_3427043_59 Domain of unknown function (DUF4105) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 308.0
PJS3_k127_3427043_6 type II secretion system protein K02454 - - 9.13e-301 932.0
PJS3_k127_3427043_60 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 306.0
PJS3_k127_3427043_61 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 301.0
PJS3_k127_3427043_62 Belongs to the BI1 family K19416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005787 295.0
PJS3_k127_3427043_63 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 297.0
PJS3_k127_3427043_64 protein conserved in bacteria K09921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007024 290.0
PJS3_k127_3427043_65 phosphoserine phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007813 293.0
PJS3_k127_3427043_66 esterase K07000 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003628 286.0
PJS3_k127_3427043_67 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007379 299.0
PJS3_k127_3427043_68 Protein of unknown function (DUF1275) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004408 270.0
PJS3_k127_3427043_69 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004303 264.0
PJS3_k127_3427043_7 Histidine kinase - - - 1.366e-277 878.0
PJS3_k127_3427043_70 including N-acetylases of ribosomal proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004887 260.0
PJS3_k127_3427043_71 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001643 253.0
PJS3_k127_3427043_72 enzyme of heme biosynthesis K02496 - 2.1.1.107 0.000000000000000000000000000000000000000000000000000000000000000000000003886 257.0
PJS3_k127_3427043_74 - - - - 0.000000000000000000000000000000000000000000000000000000000000000168 228.0
PJS3_k127_3427043_75 cytochrome c5 - - - 0.0000000000000000000000000000000000000000000000000000000000000006896 222.0
PJS3_k127_3427043_76 sister chromatid segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000008707 229.0
PJS3_k127_3427043_77 at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA) K04752 - - 0.000000000000000000000000000000000000000000000000000000000000005766 216.0
PJS3_k127_3427043_78 Phosphoglycerate mutase family - - - 0.0000000000000000000000000000000000000000000000000000000000000069 224.0
PJS3_k127_3427043_79 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019222,GO:0019439,GO:0034353,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000003266 216.0
PJS3_k127_3427043_8 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 4.622e-273 858.0
PJS3_k127_3427043_80 synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000001272 217.0
PJS3_k127_3427043_81 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.00000000000000000000000000000000000000000000000000000000006104 212.0
PJS3_k127_3427043_82 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000002708 202.0
PJS3_k127_3427043_83 - - - - 0.0000000000000000000000000000000000000000000000000000001042 197.0
PJS3_k127_3427043_85 START domain - - - 0.00000000000000000000000000000000000000000000001198 181.0
PJS3_k127_3427043_86 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K05710 - - 0.00000000000000000000000000000000000000000000009261 171.0
PJS3_k127_3427043_87 protein conserved in bacteria K09920 - - 0.0000000000000000000000000000000000000000000006162 170.0
PJS3_k127_3427043_88 TRL-like protein family - - - 0.000000000000000000000000000000000000000002888 156.0
PJS3_k127_3427043_89 COG2076 Membrane transporters of cations and cationic drugs K11741 - - 0.000000000000000000000000000000000000000004019 156.0
PJS3_k127_3427043_9 argininosuccinate lyase K01755 - 4.3.2.1 4.566e-262 811.0
PJS3_k127_3427043_90 Protein of unknown function (DUF805) - - - 0.00000000000000000000000000000000001031 142.0
PJS3_k127_3427043_91 of membrane protease K07340 - - 0.0000000000000000000000000000000001726 137.0
PJS3_k127_3427043_92 response to oxidative stress - - - 0.0000000000000000000000000000000006907 135.0
PJS3_k127_3427043_93 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000005684 137.0
PJS3_k127_3427043_95 Domain of unknown function (DUF4112) - - - 0.000000000000000000000000001342 118.0
PJS3_k127_3427043_96 protein conserved in bacteria K09806 - - 0.000000000000000000000000001725 115.0
PJS3_k127_3427043_97 - - - - 0.000000000000000000000000009787 117.0
PJS3_k127_3427043_98 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 0.0000000000000000000000001041 123.0
PJS3_k127_3427043_99 - - - - 0.0000000000000000000000002902 115.0
PJS3_k127_3465035_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 2.081e-239 742.0
PJS3_k127_3465035_1 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 4.385e-229 721.0
PJS3_k127_3465035_2 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 GO:0000166,GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004077,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009305,GO:0009374,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0017053,GO:0017076,GO:0017144,GO:0018130,GO:0018271,GO:0019538,GO:0019752,GO:0019842,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033218,GO:0033293,GO:0034641,GO:0035639,GO:0036094,GO:0036211,GO:0042364,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1990837 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001439 283.0
PJS3_k127_3465035_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000928 226.0
PJS3_k127_3465035_4 - - - - 0.00000000000000000000000000000000000000000005523 168.0
PJS3_k127_3465035_5 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000001954 145.0
PJS3_k127_3465035_7 - - - - 0.0000001731 55.0
PJS3_k127_3465035_9 - - - - 0.000001371 51.0
PJS3_k127_3565604_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 7.195e-289 892.0
PJS3_k127_3565604_1 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 3.038e-269 850.0
PJS3_k127_3565604_10 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 506.0
PJS3_k127_3565604_11 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 507.0
PJS3_k127_3565604_12 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 503.0
PJS3_k127_3565604_13 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 493.0
PJS3_k127_3565604_14 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007976 484.0
PJS3_k127_3565604_15 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008264 476.0
PJS3_k127_3565604_16 phosphotransferase related to Ser Thr protein K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005992 460.0
PJS3_k127_3565604_17 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008174 425.0
PJS3_k127_3565604_18 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 397.0
PJS3_k127_3565604_19 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000056 393.0
PJS3_k127_3565604_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 2.531e-255 794.0
PJS3_k127_3565604_20 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 375.0
PJS3_k127_3565604_21 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 364.0
PJS3_k127_3565604_22 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 341.0
PJS3_k127_3565604_23 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 338.0
PJS3_k127_3565604_24 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 338.0
PJS3_k127_3565604_25 of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 319.0
PJS3_k127_3565604_26 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 298.0
PJS3_k127_3565604_27 Protein of unknown function (DUF3426) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 304.0
PJS3_k127_3565604_28 Domain of unknown function (DUF4124) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001351 279.0
PJS3_k127_3565604_29 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001458 271.0
PJS3_k127_3565604_3 Histidine kinase K20972,K20973 - 2.7.13.3 8.074e-222 719.0
PJS3_k127_3565604_30 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000000002609 262.0
PJS3_k127_3565604_31 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000004393 249.0
PJS3_k127_3565604_32 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K03793 - 1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000001301 252.0
PJS3_k127_3565604_33 redox protein, regulator of disulfide bond formation K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000003523 223.0
PJS3_k127_3565604_34 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000002806 211.0
PJS3_k127_3565604_35 protein affecting Mg2 Co2 transport K06195 - - 0.0000000000000000000000000000000000000000000000000000000001618 205.0
PJS3_k127_3565604_36 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000000000000000000000000000000000000127 204.0
PJS3_k127_3565604_37 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000003536 193.0
PJS3_k127_3565604_38 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 - - 0.00000000000000000000000000000000000000001883 155.0
PJS3_k127_3565604_39 PFAM Chorismate mutase, type II K04782 - 4.2.99.21 0.00000000000000000000000000000009932 126.0
PJS3_k127_3565604_4 Belongs to the GARS family K01945 - 6.3.4.13 9.779e-222 693.0
PJS3_k127_3565604_40 Domain of unknown function (DUF4124) - - - 0.0000000000000000006507 94.0
PJS3_k127_3565604_41 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000029 69.0
PJS3_k127_3565604_5 COG0464 ATPases of the AAA class - - - 1.546e-216 683.0
PJS3_k127_3565604_6 TonB-dependent receptor K02014 - - 5.035e-207 664.0
PJS3_k127_3565604_7 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K00974 - 2.7.7.72 2.577e-195 616.0
PJS3_k127_3565604_8 COG2070 Dioxygenases related to 2-nitropropane dioxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 567.0
PJS3_k127_3565604_9 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 561.0
PJS3_k127_36477_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1630.0
PJS3_k127_36477_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1456.0
PJS3_k127_36477_10 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004192 614.0
PJS3_k127_36477_11 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 602.0
PJS3_k127_36477_12 COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 621.0
PJS3_k127_36477_13 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 566.0
PJS3_k127_36477_14 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 533.0
PJS3_k127_36477_15 unusual protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 529.0
PJS3_k127_36477_16 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009566 507.0
PJS3_k127_36477_17 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 492.0
PJS3_k127_36477_18 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006642 477.0
PJS3_k127_36477_19 AraC family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 467.0
PJS3_k127_36477_2 dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes - - - 0.0 1049.0
PJS3_k127_36477_20 COG0642 Signal transduction histidine kinase K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 468.0
PJS3_k127_36477_21 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004154 421.0
PJS3_k127_36477_22 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 368.0
PJS3_k127_36477_23 nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 334.0
PJS3_k127_36477_24 LuxR family transcriptional regulator K04333,K20918 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 315.0
PJS3_k127_36477_25 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 315.0
PJS3_k127_36477_26 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 309.0
PJS3_k127_36477_27 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003544 271.0
PJS3_k127_36477_28 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001745 254.0
PJS3_k127_36477_29 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000484 249.0
PJS3_k127_36477_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 7.712e-299 933.0
PJS3_k127_36477_30 fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002083 251.0
PJS3_k127_36477_31 Type II secretion system protein C K02452 - - 0.0000000000000000000000000000000000000000000000000000000000000000002627 239.0
PJS3_k127_36477_32 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000000000000000000000347 228.0
PJS3_k127_36477_33 D-Amino acid dehydrogenase K00285,K03153 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0036094,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043436,GO:0043799,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0072527,GO:0072528,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.4.3.19,1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000008285 232.0
PJS3_k127_36477_34 Peptidyl-prolyl cis-trans K03774 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000009847 220.0
PJS3_k127_36477_35 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000001428 222.0
PJS3_k127_36477_36 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000000000000000000004041 198.0
PJS3_k127_36477_37 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000006612 198.0
PJS3_k127_36477_39 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000001099 199.0
PJS3_k127_36477_4 secretion pathway protein K02453 - - 8.323e-277 869.0
PJS3_k127_36477_40 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.000000000000000000000000000000000000000000000000000008663 192.0
PJS3_k127_36477_41 transcriptional regulator K22105 - - 0.0000000000000000000000000000000000000000000000000000101 197.0
PJS3_k127_36477_42 Uncharacterized lipoprotein K07286 - - 0.000000000000000000000000000000000000000000000000003881 187.0
PJS3_k127_36477_43 COG4966 Tfp pilus assembly protein PilW K02672 - - 0.000000000000000000000000000000000000000000000002205 183.0
PJS3_k127_36477_44 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000000000002206 173.0
PJS3_k127_36477_45 Antibiotic biosynthesis monooxygenase - GO:0003674,GO:0003824 - 0.000000000000000000000000000000000000000004905 157.0
PJS3_k127_36477_46 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000000000000004898 152.0
PJS3_k127_36477_47 Forkhead associated domain - - - 0.00000000000000000000000000000000000000008864 162.0
PJS3_k127_36477_48 - - - - 0.00000000000000000000000000000000000003119 156.0
PJS3_k127_36477_49 - - - - 0.000000000000000000000000000000000002586 141.0
PJS3_k127_36477_5 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 4.238e-243 761.0
PJS3_k127_36477_50 Type II secretion system (T2SS), protein N K02463 - - 0.000000000000000000000000000000000005742 145.0
PJS3_k127_36477_51 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000000000000001041 138.0
PJS3_k127_36477_52 protein transport across the cell outer membrane K08084 - - 0.000000000000000000000000000000001979 135.0
PJS3_k127_36477_54 Tfp pilus assembly protein PilE K02655 - - 0.0000000000000000000000000000109 123.0
PJS3_k127_36477_55 Prokaryotic N-terminal methylation motif K02671 - - 0.0000000000000000000000000006289 120.0
PJS3_k127_36477_56 Pilus assembly protein PilX - - - 0.000000000000000000000000157 113.0
PJS3_k127_36477_58 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000001178 76.0
PJS3_k127_36477_59 Cysteine-rich CPXCG - - - 0.00000000000005198 73.0
PJS3_k127_36477_6 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 7.25e-238 741.0
PJS3_k127_36477_60 Bacterial regulatory proteins, tetR family - - - 0.00000001317 64.0
PJS3_k127_36477_63 Type II transport protein GspH K08084 - - 0.00000898 54.0
PJS3_k127_36477_7 Histidine kinase - - - 6.518e-226 725.0
PJS3_k127_36477_8 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 1.335e-194 618.0
PJS3_k127_36477_9 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 613.0
PJS3_k127_4033386_0 COG0436 Aspartate tyrosine aromatic aminotransferase K12252,K14261 - 2.6.1.84 2.971e-238 739.0
PJS3_k127_4033386_1 homoserine dehydrogenase K00003 - 1.1.1.3 1.083e-213 670.0
PJS3_k127_4033386_10 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000006841 231.0
PJS3_k127_4033386_11 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000001132 212.0
PJS3_k127_4033386_12 membrane - - - 0.000000000000000000000000000000000000000000113 161.0
PJS3_k127_4033386_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 8.022e-213 664.0
PJS3_k127_4033386_3 DinB superfamily - - - 3.886e-196 621.0
PJS3_k127_4033386_4 Beta-lactamase class C and other penicillin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 482.0
PJS3_k127_4033386_5 recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 448.0
PJS3_k127_4033386_6 COG1718 Serine threonine protein kinase involved in cell cycle control K07178 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 445.0
PJS3_k127_4033386_7 Histidine-specific methyltransferase, SAM-dependent K18911 - 2.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 409.0
PJS3_k127_4033386_8 mRNA catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000001073 240.0
PJS3_k127_4033386_9 MAPEG family - - - 0.000000000000000000000000000000000000000000000000000000000000000017 226.0
PJS3_k127_40895_0 LVIVD repeat - - - 0.0 1752.0
PJS3_k127_40895_1 Required for chromosome condensation and partitioning K03529 - - 0.0 1578.0
PJS3_k127_40895_10 Ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005045 606.0
PJS3_k127_40895_11 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 606.0
PJS3_k127_40895_12 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006585 579.0
PJS3_k127_40895_13 NAD FAD-binding protein K06954 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 526.0
PJS3_k127_40895_14 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 541.0
PJS3_k127_40895_15 COG2230 Cyclopropane fatty acid synthase and related methyltransferases K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 511.0
PJS3_k127_40895_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006408 488.0
PJS3_k127_40895_17 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 490.0
PJS3_k127_40895_18 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004854 475.0
PJS3_k127_40895_19 Permease K03548 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 460.0
PJS3_k127_40895_2 exporters of the RND superfamily K07003 - - 0.0 1012.0
PJS3_k127_40895_20 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 469.0
PJS3_k127_40895_21 Belongs to the DNA photolyase family K01669 GO:0003674,GO:0003824,GO:0003904,GO:0003913,GO:0006139,GO:0006259,GO:0006281,GO:0006464,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0018298,GO:0019538,GO:0033554,GO:0034641,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360,GO:1901564 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 438.0
PJS3_k127_40895_22 Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 406.0
PJS3_k127_40895_23 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004393 405.0
PJS3_k127_40895_24 Transcriptional - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 363.0
PJS3_k127_40895_25 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 363.0
PJS3_k127_40895_26 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 365.0
PJS3_k127_40895_27 Cytochrome c3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 335.0
PJS3_k127_40895_28 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 314.0
PJS3_k127_40895_29 High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway K06203 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000537 298.0
PJS3_k127_40895_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K12136 - - 1.282e-289 909.0
PJS3_k127_40895_30 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 288.0
PJS3_k127_40895_31 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964,K22130 - 4.1.1.104,4.2.1.109 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000447 282.0
PJS3_k127_40895_32 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006065 281.0
PJS3_k127_40895_33 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002374 278.0
PJS3_k127_40895_34 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009067 275.0
PJS3_k127_40895_35 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003337 274.0
PJS3_k127_40895_36 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006338 262.0
PJS3_k127_40895_37 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002422 267.0
PJS3_k127_40895_38 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000004535 262.0
PJS3_k127_40895_4 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003909,GO:0003911,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0034645,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050662,GO:0050896,GO:0051103,GO:0051287,GO:0051716,GO:0070403,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1901576 6.5.1.2 5.929e-251 792.0
PJS3_k127_40895_40 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008992 241.0
PJS3_k127_40895_41 Protein of unknown function (DUF1365) K09701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003108 247.0
PJS3_k127_40895_42 glycine cleavage system K03567 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003986 241.0
PJS3_k127_40895_43 Peroxiredoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000002583 231.0
PJS3_k127_40895_44 - - - - 0.00000000000000000000000000000000000000000000000000000000004414 211.0
PJS3_k127_40895_45 NlpB/DapX lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000002287 203.0
PJS3_k127_40895_46 Nucleoside-diphosphate-sugar epimerases - - - 0.000000000000000000000000000000000000000000000000000004984 198.0
PJS3_k127_40895_47 YHYH protein - - - 0.000000000000000000000000000000000000000000000000003881 195.0
PJS3_k127_40895_48 - - - - 0.000000000000000000000000000000000000000002684 163.0
PJS3_k127_40895_5 oxidoreductase - - - 1.38e-241 758.0
PJS3_k127_40895_50 - - - - 0.0000000000000000000000000000000000808 138.0
PJS3_k127_40895_51 Acyl-CoA-binding protein - - - 0.00000000000000000000000000000000009124 134.0
PJS3_k127_40895_53 helix_turn_helix, mercury resistance K22491 - - 0.000000000000000000000000000007892 131.0
PJS3_k127_40895_54 - - - - 0.0000000000000000000008686 96.0
PJS3_k127_40895_56 Belongs to the sulfur carrier protein TusA family K04085 - - 0.000000000000000007915 85.0
PJS3_k127_40895_57 Uncharacterised protein family (UPF0270) K09898 - - 0.00000000000000006643 82.0
PJS3_k127_40895_59 Bacterial SH3 domain homologues - - - 0.0000001032 61.0
PJS3_k127_40895_6 Histidine kinase K20973 - 2.7.13.3 2.177e-236 752.0
PJS3_k127_40895_61 - - - - 0.00004506 51.0
PJS3_k127_40895_62 - - - - 0.00006608 51.0
PJS3_k127_40895_7 ATP-dependent helicase HrpB K03579 - 3.6.4.13 6.109e-231 741.0
PJS3_k127_40895_8 COG2303 Choline dehydrogenase and related flavoproteins - - - 3.449e-225 710.0
PJS3_k127_40895_9 - - - - 5.44e-208 662.0
PJS3_k127_4107217_0 efflux pump K18138 - - 0.0 1387.0
PJS3_k127_4107217_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1326.0
PJS3_k127_4107217_10 can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli K11105 - - 7.102e-215 680.0
PJS3_k127_4107217_11 belongs to the aldehyde dehydrogenase family K00154 - 1.2.1.68 3.43e-214 674.0
PJS3_k127_4107217_12 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 3.283e-208 655.0
PJS3_k127_4107217_13 COG1960 Acyl-CoA dehydrogenases - - - 7.734e-202 632.0
PJS3_k127_4107217_14 COG1960 Acyl-CoA dehydrogenases - - - 3.825e-195 612.0
PJS3_k127_4107217_15 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 560.0
PJS3_k127_4107217_16 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007786 559.0
PJS3_k127_4107217_17 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 557.0
PJS3_k127_4107217_18 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006932 553.0
PJS3_k127_4107217_19 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 533.0
PJS3_k127_4107217_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0 1065.0
PJS3_k127_4107217_20 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 527.0
PJS3_k127_4107217_21 flavoprotein involved in K transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000924 537.0
PJS3_k127_4107217_22 Peptidase, M16 K00960,K07263 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 527.0
PJS3_k127_4107217_23 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007722 525.0
PJS3_k127_4107217_24 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 518.0
PJS3_k127_4107217_25 Iron permease FTR1 family K07243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 493.0
PJS3_k127_4107217_26 Chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 461.0
PJS3_k127_4107217_27 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 459.0
PJS3_k127_4107217_28 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006331 432.0
PJS3_k127_4107217_29 Histidine kinase K20972 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 424.0
PJS3_k127_4107217_3 Acyltransferase - - - 4.833e-317 979.0
PJS3_k127_4107217_30 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 397.0
PJS3_k127_4107217_31 cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 374.0
PJS3_k127_4107217_32 Catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 370.0
PJS3_k127_4107217_33 acetyltransferases and hydrolases with the alpha beta hydrolase fold K01046 - 3.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 365.0
PJS3_k127_4107217_34 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 343.0
PJS3_k127_4107217_35 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 327.0
PJS3_k127_4107217_36 COG1283 Na phosphate symporter K03324 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 314.0
PJS3_k127_4107217_37 COG2818 3-methyladenine DNA glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 294.0
PJS3_k127_4107217_38 hydrolase of the alpha beta-hydrolase fold K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006901 295.0
PJS3_k127_4107217_39 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001986 289.0
PJS3_k127_4107217_4 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 2.384e-277 860.0
PJS3_k127_4107217_40 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008234 281.0
PJS3_k127_4107217_41 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009957 284.0
PJS3_k127_4107217_42 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000003623 264.0
PJS3_k127_4107217_43 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006127 264.0
PJS3_k127_4107217_44 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000000000172 251.0
PJS3_k127_4107217_45 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007048 239.0
PJS3_k127_4107217_46 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000000000000000000002463 237.0
PJS3_k127_4107217_47 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000000000000000000000000001163 234.0
PJS3_k127_4107217_48 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000006829 233.0
PJS3_k127_4107217_49 - - - - 0.0000000000000000000000000000000000000000000000000000000000245 219.0
PJS3_k127_4107217_5 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 2.231e-275 862.0
PJS3_k127_4107217_50 - - - - 0.000000000000000000000000000000000000000000000000000001871 194.0
PJS3_k127_4107217_51 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000002512 189.0
PJS3_k127_4107217_52 Metal-dependent hydrolase K07043 - - 0.00000000000000000000000000000000000000000001005 171.0
PJS3_k127_4107217_53 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.0000000000000000000000000000000000000001062 152.0
PJS3_k127_4107217_54 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.0000000000000000000000000000000000000007295 148.0
PJS3_k127_4107217_55 - - - - 0.000000000000000000000000000000000000002489 153.0
PJS3_k127_4107217_56 Multidrug transporter - - - 0.000000000000000000000000000000000000004873 149.0
PJS3_k127_4107217_57 protein conserved in bacteria - - - 0.000000000000000000000000000000000000006278 147.0
PJS3_k127_4107217_58 Phage shock protein A K03615,K03969,K21471 - - 0.0000000000000000000000000000000002522 140.0
PJS3_k127_4107217_59 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000001427 130.0
PJS3_k127_4107217_6 GMC oxidoreductase family - - - 4.718e-245 767.0
PJS3_k127_4107217_61 cold-shock protein K03704 - - 0.000000000000000000000000000000003948 128.0
PJS3_k127_4107217_62 type III effector - - - 0.00000000000000000000000000000006919 128.0
PJS3_k127_4107217_63 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000000002937 111.0
PJS3_k127_4107217_64 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000001878 80.0
PJS3_k127_4107217_65 - - - - 0.0000000000401 68.0
PJS3_k127_4107217_67 PFAM Porin K16079 - - 0.000000008965 65.0
PJS3_k127_4107217_68 Bacterial regulatory proteins, tetR family - - - 0.0000002529 61.0
PJS3_k127_4107217_7 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 1.066e-238 752.0
PJS3_k127_4107217_8 Protein of unknown function (DUF1298) K00635 - 2.3.1.20 3.524e-238 741.0
PJS3_k127_4107217_9 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 2.745e-228 721.0
PJS3_k127_4195135_0 Histidine kinase - - - 0.0 1562.0
PJS3_k127_4195135_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 4.018e-243 766.0
PJS3_k127_4195135_10 - - - - 0.000000001356 59.0
PJS3_k127_4195135_2 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 9.783e-238 743.0
PJS3_k127_4195135_3 general secretion pathway protein K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 557.0
PJS3_k127_4195135_4 chemotaxis K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 459.0
PJS3_k127_4195135_5 Sensory box protein response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 454.0
PJS3_k127_4195135_6 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001177 247.0
PJS3_k127_4195135_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000009744 241.0
PJS3_k127_4195135_8 Protein-glutamate methylesterase K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000001561 211.0
PJS3_k127_4195135_9 secretion system protein G K02456 - - 0.00000000000000000001176 94.0
PJS3_k127_4218539_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0 1011.0
PJS3_k127_4218539_1 flavoprotein involved in K transport - - - 1.466e-221 700.0
PJS3_k127_4218539_10 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002348 271.0
PJS3_k127_4218539_11 esterase lipase K14731 - 3.1.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000002006 261.0
PJS3_k127_4218539_12 Belongs to the UPF0758 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001619 242.0
PJS3_k127_4218539_14 Transcriptional - - - 0.00000000000000000000000000000000000000000000000000000000000000104 220.0
PJS3_k127_4218539_15 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000000000002702 198.0
PJS3_k127_4218539_16 Protein of unknown function (DUF1449) - - - 0.00000000000000000000000000000000000000000000002659 178.0
PJS3_k127_4218539_17 helicase - - - 0.0000000000000000000000000000000000000000000002867 168.0
PJS3_k127_4218539_18 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000000000000000000000000006008 153.0
PJS3_k127_4218539_19 Superfamily II DNA RNA helicases, SNF2 family - - - 0.00000000000000000000000000000000000001201 147.0
PJS3_k127_4218539_2 Helix-turn-helix domain of transposase family ISL3 K07485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 592.0
PJS3_k127_4218539_20 - - - - 0.0000000000000000000000000000000000009139 142.0
PJS3_k127_4218539_21 PspA/IM30 family K03969 - - 0.0000000000000000000000000000000003425 139.0
PJS3_k127_4218539_22 Inovirus Gp2 - GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0050896 - 0.0000000000000000000000000000009762 132.0
PJS3_k127_4218539_23 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00000000000000000000000003248 109.0
PJS3_k127_4218539_24 transcriptional regulator K07733 - - 0.00000000000000000000003309 100.0
PJS3_k127_4218539_25 - - - - 0.000000000000007115 82.0
PJS3_k127_4218539_27 - - - - 0.00007774 45.0
PJS3_k127_4218539_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 568.0
PJS3_k127_4218539_4 COG5377 Phage-related protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003544 493.0
PJS3_k127_4218539_5 Domain of unknown function (DUF932) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 484.0
PJS3_k127_4218539_6 Arm DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 460.0
PJS3_k127_4218539_7 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 465.0
PJS3_k127_4218539_8 desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 439.0
PJS3_k127_4218539_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 405.0
PJS3_k127_4306719_0 Belongs to the GMC oxidoreductase family - - - 3.818e-261 812.0
PJS3_k127_4306719_1 - - - - 6.025e-243 766.0
PJS3_k127_4306719_10 - - - - 0.000000001801 63.0
PJS3_k127_4306719_2 Pkd domain containing protein - - - 1.372e-218 691.0
PJS3_k127_4306719_3 Belongs to the peptidase S1C family K04691,K04771,K04772 - 3.4.21.107 4.411e-207 653.0
PJS3_k127_4306719_4 acyl-CoA transferases carnitine dehydratase K07749 - 2.8.3.16 2.643e-202 636.0
PJS3_k127_4306719_5 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 521.0
PJS3_k127_4306719_6 Predicted membrane protein (DUF2238) K08984 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 319.0
PJS3_k127_4306719_7 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000235 245.0
PJS3_k127_4306719_8 Protein of unknown function (DUF3047) - - - 0.0000000000000000000000000000000000000000000000000003572 192.0
PJS3_k127_4487560_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1046.0
PJS3_k127_4487560_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006614 271.0
PJS3_k127_4487560_2 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000008336 107.0
PJS3_k127_4487560_3 - - - - 0.00009728 45.0
PJS3_k127_4511423_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.542e-252 782.0
PJS3_k127_4511423_1 Gluconolactonase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 501.0
PJS3_k127_4511423_2 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 389.0
PJS3_k127_4511423_3 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.000000000000000000000000000000000000002971 149.0
PJS3_k127_4613253_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1060.0
PJS3_k127_4613253_1 acyl-CoA dehydrogenase - - - 0.0 1037.0
PJS3_k127_4613253_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 473.0
PJS3_k127_4613253_11 chaperone-mediated protein folding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 486.0
PJS3_k127_4613253_12 Protein of unknown function (DUF3570) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 465.0
PJS3_k127_4613253_13 COG0720 6-pyruvoyl-tetrahydropterin synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 445.0
PJS3_k127_4613253_14 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 450.0
PJS3_k127_4613253_15 Phospholipase K01058 - 3.1.1.32,3.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 422.0
PJS3_k127_4613253_16 Histidine kinase K10916 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 406.0
PJS3_k127_4613253_17 protein conserved in bacteria K09781 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 382.0
PJS3_k127_4613253_18 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 361.0
PJS3_k127_4613253_19 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 334.0
PJS3_k127_4613253_2 acyl-CoA dehydrogenase - - - 1.707e-294 912.0
PJS3_k127_4613253_20 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 332.0
PJS3_k127_4613253_21 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251 297.0
PJS3_k127_4613253_22 diguanylate cyclase K11444 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000005114 278.0
PJS3_k127_4613253_23 COG3103 SH3 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002014 259.0
PJS3_k127_4613253_24 Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003553 253.0
PJS3_k127_4613253_25 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000006841 236.0
PJS3_k127_4613253_26 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000764 226.0
PJS3_k127_4613253_27 - - - - 0.00000000000000000000000000000000000000000000000000000000000000007971 225.0
PJS3_k127_4613253_28 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000000000000000000000000000000004809 224.0
PJS3_k127_4613253_29 endonuclease I K01150 - 3.1.21.1 0.000000000000000000000000000000000000000000000000000000001292 207.0
PJS3_k127_4613253_3 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 9.595e-278 879.0
PJS3_k127_4613253_30 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family K02503 - - 0.000000000000000000000000000000000000000000000000000000002218 200.0
PJS3_k127_4613253_31 Uracil DNA glycosylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000001284 202.0
PJS3_k127_4613253_32 transcriptional regulator - - - 0.000000000000000000000000000000000000000000006958 171.0
PJS3_k127_4613253_34 Trm112p-like protein K09791 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000003472 93.0
PJS3_k127_4613253_35 Helix-turn-helix domain of transposase family ISL3 K07485 - - 0.00000000000001031 73.0
PJS3_k127_4613253_36 Arc-like DNA binding domain - - - 0.00000000000008035 75.0
PJS3_k127_4613253_37 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 0.000000000003547 66.0
PJS3_k127_4613253_4 Concanavalin A-like lectin/glucanases superfamily - - - 5.6e-264 838.0
PJS3_k127_4613253_5 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 1.412e-241 753.0
PJS3_k127_4613253_6 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates K01637 - 4.1.3.1 7.185e-229 712.0
PJS3_k127_4613253_7 - - - - 3.788e-220 694.0
PJS3_k127_4613253_8 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 610.0
PJS3_k127_4613253_9 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009094 554.0
PJS3_k127_4658932_0 Animal haem peroxidase - - - 0.0 1675.0
PJS3_k127_4658932_1 2-oxoglutarate dehydrogenase K00164 - 1.2.4.2 0.0 1644.0
PJS3_k127_4658932_10 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576 - - 2.325e-257 797.0
PJS3_k127_4658932_100 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000005771 149.0
PJS3_k127_4658932_101 phosphohistidine phosphatase K08296 - - 0.00000000000000000000000000000000000009115 147.0
PJS3_k127_4658932_102 protein conserved in bacteria - - - 0.0000000000000000000000000000000000004067 147.0
PJS3_k127_4658932_103 - - - - 0.0000000000000000000000000000001882 126.0
PJS3_k127_4658932_104 Sulfur carrier protein TusA K04085 - - 0.000000000000000000000000000004623 123.0
PJS3_k127_4658932_105 Metallopeptidase family M24 - - - 0.00000000000000000000000000006347 127.0
PJS3_k127_4658932_106 mRNA catabolic process - - - 0.00000000000000000000000001337 117.0
PJS3_k127_4658932_11 2-oxoglutarate dehydrogenase complex K00382 - 1.8.1.4 4.07e-253 786.0
PJS3_k127_4658932_110 Autoinducer binding domain - - - 0.000000000000002662 84.0
PJS3_k127_4658932_112 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.00000000001444 67.0
PJS3_k127_4658932_117 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.0004845 45.0
PJS3_k127_4658932_12 flavoprotein involved in K transport - - - 9.542e-240 749.0
PJS3_k127_4658932_13 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 6.705e-235 731.0
PJS3_k127_4658932_14 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 1.486e-233 730.0
PJS3_k127_4658932_15 in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor K14260 - 2.6.1.2,2.6.1.66 2.602e-226 705.0
PJS3_k127_4658932_16 BFD-like [2Fe-2S] binding domain K00362 - 1.7.1.15 5.58e-224 713.0
PJS3_k127_4658932_17 MMPL family K07003 - - 3.822e-216 695.0
PJS3_k127_4658932_18 MMPL family K07003 - - 2.735e-207 671.0
PJS3_k127_4658932_19 Short chain dehydrogenase - - - 1.177e-206 658.0
PJS3_k127_4658932_2 COG2909 ATP-dependent transcriptional regulator - - - 0.0 1379.0
PJS3_k127_4658932_20 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 3.739e-206 646.0
PJS3_k127_4658932_21 Belongs to the thiolase family K00632 GO:0003674,GO:0003824,GO:0003857,GO:0003988,GO:0004300,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016408,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0016829,GO:0016835,GO:0016836,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0033542,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 2.3.1.16 6.004e-205 646.0
PJS3_k127_4658932_22 flavoprotein involved in K transport - - - 1.483e-202 644.0
PJS3_k127_4658932_23 Aminotransferase K00812 - 2.6.1.1 7.106e-202 634.0
PJS3_k127_4658932_24 MATE efflux family protein K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005076 602.0
PJS3_k127_4658932_25 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 587.0
PJS3_k127_4658932_26 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 565.0
PJS3_k127_4658932_27 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 566.0
PJS3_k127_4658932_28 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 555.0
PJS3_k127_4658932_29 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes K06132 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 558.0
PJS3_k127_4658932_3 COG1960 Acyl-CoA dehydrogenases K06445 - - 0.0 1157.0
PJS3_k127_4658932_30 COG0451 Nucleoside-diphosphate-sugar epimerases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 547.0
PJS3_k127_4658932_31 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 534.0
PJS3_k127_4658932_32 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 GO:0003674,GO:0003824,GO:0004149,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008289,GO:0009060,GO:0009987,GO:0015980,GO:0016417,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016751,GO:0016999,GO:0017144,GO:0019752,GO:0031405,GO:0031406,GO:0032991,GO:0033293,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045333,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:0140096,GO:1901363,GO:1901681,GO:1902494,GO:1990204,GO:1990234 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009549 510.0
PJS3_k127_4658932_33 AraC family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 497.0
PJS3_k127_4658932_34 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006472 505.0
PJS3_k127_4658932_35 diguanylate cyclase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 510.0
PJS3_k127_4658932_36 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K22067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 487.0
PJS3_k127_4658932_37 transcriptional regulator K03576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005692 482.0
PJS3_k127_4658932_38 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006849 482.0
PJS3_k127_4658932_39 Alginate export - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 482.0
PJS3_k127_4658932_4 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0 1141.0
PJS3_k127_4658932_40 ATP-NAD kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 479.0
PJS3_k127_4658932_41 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007955 473.0
PJS3_k127_4658932_42 SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556 K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 459.0
PJS3_k127_4658932_43 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K15578 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 457.0
PJS3_k127_4658932_44 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005134 458.0
PJS3_k127_4658932_45 Esterase lipase K14731 - 3.1.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008917 449.0
PJS3_k127_4658932_46 Aminoglycoside phosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008979 452.0
PJS3_k127_4658932_47 Metal-dependent hydrolase K07044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 447.0
PJS3_k127_4658932_48 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007976 443.0
PJS3_k127_4658932_49 Predicted metal-dependent hydrolase K07044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005845 430.0
PJS3_k127_4658932_5 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.0 1120.0
PJS3_k127_4658932_50 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 427.0
PJS3_k127_4658932_51 Predicted metal-dependent hydrolase K07044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005759 409.0
PJS3_k127_4658932_52 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 413.0
PJS3_k127_4658932_53 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 390.0
PJS3_k127_4658932_54 Predicted metal-dependent hydrolase K07044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 374.0
PJS3_k127_4658932_55 esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 377.0
PJS3_k127_4658932_56 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004402 369.0
PJS3_k127_4658932_57 nucleoside-diphosphate sugar epimerase K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 358.0
PJS3_k127_4658932_58 Belongs to the methyltransferase superfamily K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000613 356.0
PJS3_k127_4658932_59 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 350.0
PJS3_k127_4658932_6 COG0457 FOG TPR repeat - - - 0.0 1100.0
PJS3_k127_4658932_60 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 356.0
PJS3_k127_4658932_61 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 348.0
PJS3_k127_4658932_62 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 - 1.1.1.290 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004234 351.0
PJS3_k127_4658932_63 antiporter K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 341.0
PJS3_k127_4658932_64 Domain of unknown function (DUF3391) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 341.0
PJS3_k127_4658932_65 COG0811 Biopolymer transport proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 327.0
PJS3_k127_4658932_66 3-methyladenine DNA glycosylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006204 324.0
PJS3_k127_4658932_67 COG0695 Glutaredoxin and related proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 323.0
PJS3_k127_4658932_68 Protein of unknown function (DUF3365) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 315.0
PJS3_k127_4658932_69 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 306.0
PJS3_k127_4658932_7 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 5.104e-304 939.0
PJS3_k127_4658932_70 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 303.0
PJS3_k127_4658932_71 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007349 293.0
PJS3_k127_4658932_72 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 303.0
PJS3_k127_4658932_73 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006186 272.0
PJS3_k127_4658932_74 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001464 272.0
PJS3_k127_4658932_75 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001752 286.0
PJS3_k127_4658932_76 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002053 270.0
PJS3_k127_4658932_77 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007955 261.0
PJS3_k127_4658932_78 Haloacid dehalogenase-like hydrolase K02566 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000104 257.0
PJS3_k127_4658932_79 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001073 244.0
PJS3_k127_4658932_8 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 6.892e-275 852.0
PJS3_k127_4658932_80 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000000000000000000006477 235.0
PJS3_k127_4658932_81 ANTAR K07183 - - 0.000000000000000000000000000000000000000000000000000000000000000002126 234.0
PJS3_k127_4658932_82 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000001805 231.0
PJS3_k127_4658932_83 rRNA methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000004809 224.0
PJS3_k127_4658932_84 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000001182 225.0
PJS3_k127_4658932_85 protein conserved in bacteria K09941 - - 0.00000000000000000000000000000000000000000000000000000000000002859 221.0
PJS3_k127_4658932_86 COG0848 Biopolymer transport protein - - - 0.00000000000000000000000000000000000000000000000000000000001663 211.0
PJS3_k127_4658932_87 Belongs to the globin family - - - 0.000000000000000000000000000000000000000000000000000000008789 201.0
PJS3_k127_4658932_88 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000000000000000000000000000000000459 191.0
PJS3_k127_4658932_89 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015232,GO:0015886,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019897,GO:0019898,GO:0022857,GO:0031224,GO:0031234,GO:0032991,GO:0042623,GO:0043190,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:1901678,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.41 0.00000000000000000000000000000000000000000000000000008949 193.0
PJS3_k127_4658932_9 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.389e-262 814.0
PJS3_k127_4658932_90 succinate dehydrogenase K00241 - - 0.00000000000000000000000000000000000000000000000002203 181.0
PJS3_k127_4658932_91 Pseudomonas avirulence D protein (AvrD) - - - 0.0000000000000000000000000000000000000000000000001074 190.0
PJS3_k127_4658932_92 - - - - 0.000000000000000000000000000000000000000000000008204 177.0
PJS3_k127_4658932_94 Membrane-anchoring subunit of succinate dehydrogenase (SDH) K00242 - - 0.0000000000000000000000000000000000000000000004526 169.0
PJS3_k127_4658932_95 protein conserved in bacteria K09906 - - 0.000000000000000000000000000000000000000000000524 174.0
PJS3_k127_4658932_96 START domain - - - 0.0000000000000000000000000000000000000000000399 170.0
PJS3_k127_4658932_97 - - - - 0.0000000000000000000000000000000000000000002363 160.0
PJS3_k127_4658932_98 COG0695 Glutaredoxin and related proteins - - - 0.000000000000000000000000000000000000000001637 160.0
PJS3_k127_4658932_99 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000003143 154.0
PJS3_k127_4669601_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1598.0
PJS3_k127_4669601_1 membrane - - - 2.918e-269 875.0
PJS3_k127_4669601_10 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 347.0
PJS3_k127_4669601_11 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 346.0
PJS3_k127_4669601_12 Belongs to the pseudouridine synthase RsuA family K06183 - 5.4.99.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000006545 265.0
PJS3_k127_4669601_13 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K11890,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000003716 227.0
PJS3_k127_4669601_14 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000003139 215.0
PJS3_k127_4669601_15 Carbon-nitrogen hydrolase K01501,K11206 - 3.5.5.1 0.000000000000000000000000000000000000000000000000002632 193.0
PJS3_k127_4669601_16 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000004599 184.0
PJS3_k127_4669601_17 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.00000000000000000000000000000000000000000000003244 174.0
PJS3_k127_4669601_18 DNA polymerase III chi subunit K02339 - 2.7.7.7 0.0000000000000000000000000000000000003605 149.0
PJS3_k127_4669601_19 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000002358 126.0
PJS3_k127_4669601_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 3.672e-248 774.0
PJS3_k127_4669601_20 - - - - 0.0000000000000000000000001306 105.0
PJS3_k127_4669601_22 - - - - 0.000001546 54.0
PJS3_k127_4669601_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 2.492e-244 761.0
PJS3_k127_4669601_4 Responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase K03568 - - 7.633e-235 734.0
PJS3_k127_4669601_5 Rod shape-determining protein K03569 - - 2.962e-201 630.0
PJS3_k127_4669601_6 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 4.269e-196 622.0
PJS3_k127_4669601_7 permease K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 492.0
PJS3_k127_4669601_8 Permease K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 437.0
PJS3_k127_4669601_9 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 351.0
PJS3_k127_48469_0 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 1.581e-309 969.0
PJS3_k127_48469_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 9.12e-284 890.0
PJS3_k127_48469_10 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 436.0
PJS3_k127_48469_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 346.0
PJS3_k127_48469_12 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 348.0
PJS3_k127_48469_13 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 321.0
PJS3_k127_48469_14 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007852 317.0
PJS3_k127_48469_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003278 258.0
PJS3_k127_48469_16 protein conserved in bacteria K03690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003979 257.0
PJS3_k127_48469_17 Protein of unknown function (DUF3015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002397 238.0
PJS3_k127_48469_18 cell division protein - - - 0.0000000000000000000000000000000000000000000000000000000000004 216.0
PJS3_k127_48469_19 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000003093 165.0
PJS3_k127_48469_2 highly regulated protein controlled by the addition removal of adenylyl groups by adenylyltransferase from specific tyrosine residues K01915 - 6.3.1.2 1.463e-281 868.0
PJS3_k127_48469_20 Phosphoribosyl-ATP K01523 - 3.6.1.31 0.000000000000000000000000000000000000000006096 158.0
PJS3_k127_48469_21 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000002761 123.0
PJS3_k127_48469_22 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000008016 106.0
PJS3_k127_48469_23 - - - - 0.0000000000000000000008757 101.0
PJS3_k127_48469_24 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000001951 87.0
PJS3_k127_48469_25 Domain of unknown function (DUF4124) - - - 0.00000000007549 70.0
PJS3_k127_48469_3 Arginyl-tRNA synthetase K01887 - 6.1.1.19 4.874e-271 844.0
PJS3_k127_48469_4 Response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes K07712 - - 3.973e-260 807.0
PJS3_k127_48469_5 Malate dehydrogenase K00027,K00029 - 1.1.1.38,1.1.1.40 2.742e-231 720.0
PJS3_k127_48469_6 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 2.3e-228 719.0
PJS3_k127_48469_7 Domain of unknown function (DUF4105) - - - 2.749e-224 711.0
PJS3_k127_48469_8 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 5.076e-224 700.0
PJS3_k127_48469_9 Histidine kinase K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 534.0
PJS3_k127_4881075_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1399.0
PJS3_k127_4881075_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1372.0
PJS3_k127_4881075_10 alanine symporter K03310 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 601.0
PJS3_k127_4881075_11 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 580.0
PJS3_k127_4881075_12 type II secretion system protein K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 576.0
PJS3_k127_4881075_13 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 569.0
PJS3_k127_4881075_14 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 553.0
PJS3_k127_4881075_15 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity K14540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 524.0
PJS3_k127_4881075_16 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 521.0
PJS3_k127_4881075_17 Acetyl-coenzyme A transporter 1 K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 519.0
PJS3_k127_4881075_18 (Lipo)protein K07121 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 520.0
PJS3_k127_4881075_19 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 495.0
PJS3_k127_4881075_2 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 1.464e-274 853.0
PJS3_k127_4881075_20 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000384 470.0
PJS3_k127_4881075_21 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008285 448.0
PJS3_k127_4881075_22 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 442.0
PJS3_k127_4881075_23 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 455.0
PJS3_k127_4881075_24 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 418.0
PJS3_k127_4881075_25 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 407.0
PJS3_k127_4881075_26 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 411.0
PJS3_k127_4881075_27 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 381.0
PJS3_k127_4881075_28 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 374.0
PJS3_k127_4881075_29 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 374.0
PJS3_k127_4881075_3 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 1.762e-264 825.0
PJS3_k127_4881075_30 Stringent starvation protein A K03599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 354.0
PJS3_k127_4881075_31 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009162 349.0
PJS3_k127_4881075_32 Cytochrome c1 K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 325.0
PJS3_k127_4881075_33 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 329.0
PJS3_k127_4881075_34 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 318.0
PJS3_k127_4881075_35 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271,K12961 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 315.0
PJS3_k127_4881075_36 Histidine kinase K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008441 326.0
PJS3_k127_4881075_37 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008822 291.0
PJS3_k127_4881075_38 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000937 286.0
PJS3_k127_4881075_39 Negative regulator of beta-lactamase expression K03806 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000001747 259.0
PJS3_k127_4881075_4 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - - - 5.952e-256 805.0
PJS3_k127_4881075_40 periplasmic or secreted lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006111 252.0
PJS3_k127_4881075_41 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006839 246.0
PJS3_k127_4881075_42 Transcriptional regulatory protein, C terminal K07664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000436 250.0
PJS3_k127_4881075_43 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000004303 244.0
PJS3_k127_4881075_44 macromolecule glycosylation - GO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0019538,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000002436 254.0
PJS3_k127_4881075_45 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000000000000000000000000005219 216.0
PJS3_k127_4881075_46 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000246 210.0
PJS3_k127_4881075_47 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000005094 192.0
PJS3_k127_4881075_48 Stringent starvation protein B K03600 - - 0.000000000000000000000000000000000000000000000000361 178.0
PJS3_k127_4881075_49 Belongs to the N-Me-Phe pilin family K02650 - - 0.0000000000000000000000000000000000000000000008138 171.0
PJS3_k127_4881075_5 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 1.671e-246 765.0
PJS3_k127_4881075_50 Membrane protein required for beta-lactamase induction K03807 - - 0.00000000000000000000000000000000000000000001706 172.0
PJS3_k127_4881075_51 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000000000008414 162.0
PJS3_k127_4881075_52 Heme iron utilization protein - - - 0.0000000000000000000000000000000000000002197 158.0
PJS3_k127_4881075_53 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000000000000005906 142.0
PJS3_k127_4881075_54 Methyltransferase K07443 - - 0.000000000000000000000000000002699 122.0
PJS3_k127_4881075_55 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.00000000000000000000007741 101.0
PJS3_k127_4881075_56 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000000000000274 94.0
PJS3_k127_4881075_57 - - - - 0.000000000000002817 80.0
PJS3_k127_4881075_58 COG3678 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein - - - 0.0000000000007322 73.0
PJS3_k127_4881075_6 Belongs to the MurCDEF family K01924 - 6.3.2.8 1.027e-237 743.0
PJS3_k127_4881075_7 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 8.118e-231 721.0
PJS3_k127_4881075_8 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 2.301e-199 635.0
PJS3_k127_4881075_9 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 1.296e-198 623.0
PJS3_k127_4883284_0 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 7.65e-236 733.0
PJS3_k127_4883284_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 4.554e-222 694.0
PJS3_k127_4883284_10 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 343.0
PJS3_k127_4883284_11 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005877 323.0
PJS3_k127_4883284_12 hydrolase of the alpha beta superfamily K07018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 286.0
PJS3_k127_4883284_13 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000000000000000007366 224.0
PJS3_k127_4883284_14 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.0000000000000000000000000000000000000000000000000000000001074 212.0
PJS3_k127_4883284_15 seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing K05808 - - 0.00000000000000000000000000000000000000000000000007002 178.0
PJS3_k127_4883284_16 protein conserved in bacteria K09908 - - 0.000000000000000000000000000000000000000000002993 169.0
PJS3_k127_4883284_17 Belongs to the BolA IbaG family - - - 0.00000000000000000000000000003888 119.0
PJS3_k127_4883284_18 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 - - 0.0000000000000000000000000000477 123.0
PJS3_k127_4883284_19 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.0000000000000000000000000000704 122.0
PJS3_k127_4883284_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 1.762e-207 651.0
PJS3_k127_4883284_20 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000003459 85.0
PJS3_k127_4883284_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 541.0
PJS3_k127_4883284_4 Reduces the stability of FtsZ polymers in the presence of ATP K06916 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 532.0
PJS3_k127_4883284_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 517.0
PJS3_k127_4883284_6 Belongs to the peptidase S1C family K04691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 504.0
PJS3_k127_4883284_7 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 471.0
PJS3_k127_4883284_8 metal-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 409.0
PJS3_k127_4883284_9 ABC transporter ATP-binding protein K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 406.0
PJS3_k127_4979098_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016884,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.5.3 0.0 1729.0
PJS3_k127_4979098_1 Protein tyrosine kinase K12132 - 2.7.11.1 9.38e-286 902.0
PJS3_k127_4979098_10 ADP-ribose pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 325.0
PJS3_k127_4979098_11 cytochrome C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 304.0
PJS3_k127_4979098_12 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005388 289.0
PJS3_k127_4979098_13 protein possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001126 274.0
PJS3_k127_4979098_14 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004145 262.0
PJS3_k127_4979098_15 XRE family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001386 249.0
PJS3_k127_4979098_16 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.000000000000000000000000000000000000000000000000000000000000000000000278 245.0
PJS3_k127_4979098_17 TM2 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000009699 226.0
PJS3_k127_4979098_18 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000000001877 225.0
PJS3_k127_4979098_19 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000009836 201.0
PJS3_k127_4979098_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 6.767e-245 762.0
PJS3_k127_4979098_20 Regulatory protein LuxR - - - 0.0000000000000000000000000000000000000000000000004082 190.0
PJS3_k127_4979098_21 DoxX K15977 - - 0.000000000000000000000000000000000000000000000005634 176.0
PJS3_k127_4979098_22 protein conserved in bacteria K11022 - - 0.0000000000000000000000000000000000000000002689 160.0
PJS3_k127_4979098_23 COG3666 Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000001312 144.0
PJS3_k127_4979098_24 Domain of unknown function (DUF4166) - - - 0.00000000000000000000000000000001161 133.0
PJS3_k127_4979098_25 - - - - 0.000000000000000000000000002442 119.0
PJS3_k127_4979098_26 Fe-S protein K06938 - - 0.0000000000000001375 81.0
PJS3_k127_4979098_3 Mg2 and Co2 transporter CorB - - - 1.546e-208 655.0
PJS3_k127_4979098_4 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008776,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016741,GO:0016742,GO:0016772,GO:0016774,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.2 1.842e-194 614.0
PJS3_k127_4979098_5 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 497.0
PJS3_k127_4979098_6 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 453.0
PJS3_k127_4979098_7 COG1943 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009275 399.0
PJS3_k127_4979098_8 Restriction endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 343.0
PJS3_k127_4979098_9 Abortive infection C-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007666 329.0
PJS3_k127_5064800_0 Ompa motb domain protein - - - 0.0 2347.0
PJS3_k127_5064800_1 domain protein - - - 0.0 2018.0
PJS3_k127_5064800_10 flavoprotein involved in K transport - - - 1.609e-216 681.0
PJS3_k127_5064800_11 Domain of unknown function (DUF3520) K07114 - - 2.276e-209 671.0
PJS3_k127_5064800_12 Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family K00558 - 2.1.1.37 2.478e-200 630.0
PJS3_k127_5064800_13 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 616.0
PJS3_k127_5064800_14 protein related to capsule biosynthesis enzymes K07154 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004827 566.0
PJS3_k127_5064800_15 unusual protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 566.0
PJS3_k127_5064800_16 TonB-dependent Receptor Plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008893 559.0
PJS3_k127_5064800_17 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 548.0
PJS3_k127_5064800_18 Cytochrome bd-type quinol oxidase, subunit 1 K00425 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 520.0
PJS3_k127_5064800_19 COG0642 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 516.0
PJS3_k127_5064800_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0 1419.0
PJS3_k127_5064800_20 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000383 514.0
PJS3_k127_5064800_21 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 504.0
PJS3_k127_5064800_22 PFAM ABC transporter K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009301 482.0
PJS3_k127_5064800_23 GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 481.0
PJS3_k127_5064800_24 Cyclopropane fatty acid synthase and related K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 441.0
PJS3_k127_5064800_25 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003799 436.0
PJS3_k127_5064800_26 rRNA (Guanine-N1-)-methyltransferase K00563 - 2.1.1.187 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 434.0
PJS3_k127_5064800_27 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 421.0
PJS3_k127_5064800_28 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008902 421.0
PJS3_k127_5064800_29 Protein of unknown function (DUF2914) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005987 419.0
PJS3_k127_5064800_3 redox protein, regulator of disulfide bond formation K09136 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018193,GO:0018197,GO:0018198,GO:0018339,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0047429,GO:0047693,GO:0071704,GO:1901564 - 0.0 1328.0
PJS3_k127_5064800_30 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 409.0
PJS3_k127_5064800_31 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 380.0
PJS3_k127_5064800_32 TIGRFAM cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 381.0
PJS3_k127_5064800_33 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003678 369.0
PJS3_k127_5064800_34 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 379.0
PJS3_k127_5064800_35 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009669 360.0
PJS3_k127_5064800_36 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 382.0
PJS3_k127_5064800_37 Pseudouridine synthase K06177 - 5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 318.0
PJS3_k127_5064800_38 hydrolase activity, acting on ester bonds K01563 - 3.8.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 322.0
PJS3_k127_5064800_39 D-alanine [D-alanyl carrier protein] ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009686 316.0
PJS3_k127_5064800_4 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K01825 - 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 0.0 1118.0
PJS3_k127_5064800_40 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 311.0
PJS3_k127_5064800_41 restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 308.0
PJS3_k127_5064800_42 Belongs to the pseudouridine synthase RsuA family K06183 - 5.4.99.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 304.0
PJS3_k127_5064800_43 Thioesterase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006466 286.0
PJS3_k127_5064800_44 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 286.0
PJS3_k127_5064800_45 Protein of unknown function (DUF2846) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007728 283.0
PJS3_k127_5064800_46 COG0811 Biopolymer transport proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002713 278.0
PJS3_k127_5064800_47 Protein of unknown function (DUF3034) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007411 271.0
PJS3_k127_5064800_48 Metal-dependent hydrolase K07043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001279 263.0
PJS3_k127_5064800_49 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000004115 248.0
PJS3_k127_5064800_5 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008964,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.1.1.31 3.856e-297 938.0
PJS3_k127_5064800_50 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000002203 231.0
PJS3_k127_5064800_51 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000406 213.0
PJS3_k127_5064800_52 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000000000000000000000000001968 229.0
PJS3_k127_5064800_53 START domain - - - 0.0000000000000000000000000000000000000000000000000000000007819 211.0
PJS3_k127_5064800_54 Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed K00632 GO:0003674,GO:0003824,GO:0003988,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 2.3.1.16 0.000000000000000000000000000000000000000000000000000000001077 202.0
PJS3_k127_5064800_55 Protein of unknown function (DUF1289) K06938 - - 0.000000000000000000000000000000000000000000000000000000003161 205.0
PJS3_k127_5064800_56 KR domain - - - 0.000000000000000000000000000000000000000000000000000000003501 209.0
PJS3_k127_5064800_57 GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000002886 202.0
PJS3_k127_5064800_58 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000000000000008372 185.0
PJS3_k127_5064800_59 Belongs to the UPF0225 family K09858 - - 0.0000000000000000000000000000000000000000000000003601 180.0
PJS3_k127_5064800_6 Belongs to the amidase family K01426 - 3.5.1.4 3.861e-253 789.0
PJS3_k127_5064800_60 biopolymer transport protein - - - 0.000000000000000000000000000000000000000000000004486 177.0
PJS3_k127_5064800_61 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000001919 179.0
PJS3_k127_5064800_62 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000000000000002305 173.0
PJS3_k127_5064800_63 GGDEF domain - - - 0.00000000000000000000000000000000000000000001017 178.0
PJS3_k127_5064800_64 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000007596 166.0
PJS3_k127_5064800_65 protein conserved in bacteria K09912 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000006005 158.0
PJS3_k127_5064800_66 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000003726 154.0
PJS3_k127_5064800_67 - - - - 0.00000000000000000000000000000000000004221 147.0
PJS3_k127_5064800_68 Group 1 truncated hemoglobin K06886 - - 0.00000000000000000000000000000000000004754 147.0
PJS3_k127_5064800_7 Belongs to the DEAD box helicase family K05591 GO:0000027,GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033677,GO:0034458,GO:0034459,GO:0034622,GO:0034641,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:0140098,GO:1901265,GO:1901360,GO:1901363 3.6.4.13 1.358e-232 726.0
PJS3_k127_5064800_70 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000002348 149.0
PJS3_k127_5064800_71 MarR family - - - 0.000000000000000000000000000000000006685 143.0
PJS3_k127_5064800_72 ketosteroid isomerase - - - 0.000000000000000000000000000000000009987 144.0
PJS3_k127_5064800_73 Cupin - - - 0.00000000000000000000000000000000002534 139.0
PJS3_k127_5064800_74 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000000000000000000001069 134.0
PJS3_k127_5064800_75 Protein of unknown function (DUF2878) - - - 0.000000000000000000000000000000008756 134.0
PJS3_k127_5064800_76 - - - - 0.00000000000000000000000000000003568 138.0
PJS3_k127_5064800_77 Late embryogenesis abundant protein - - - 0.0000000000000000000000000003854 119.0
PJS3_k127_5064800_78 Phosphate-starvation-inducible E - - - 0.00000000000000000000000000158 113.0
PJS3_k127_5064800_79 - - - - 0.000000000000000000000000003103 113.0
PJS3_k127_5064800_8 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 3.283e-224 697.0
PJS3_k127_5064800_80 Protein of unknown function (DUF1631) - - - 0.000000000000000000000000009933 126.0
PJS3_k127_5064800_81 S4 domain K14761 - - 0.00000000000000000000000002271 111.0
PJS3_k127_5064800_82 Helix-turn-helix - - - 0.0000000000000000000000137 104.0
PJS3_k127_5064800_83 Protein of unknown function (DUF3703) - - - 0.000000000000000000000141 102.0
PJS3_k127_5064800_84 Von Willebrand factor type A K07114 - - 0.00000000000000000004705 105.0
PJS3_k127_5064800_87 PilZ domain - - - 0.00000000003169 69.0
PJS3_k127_5064800_88 Glycosyl hydrolase family 48 - - - 0.00000001637 68.0
PJS3_k127_5064800_89 domain, Protein - - - 0.00000002443 67.0
PJS3_k127_5064800_9 Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed K00632 - 2.3.1.16 3.49e-218 681.0
PJS3_k127_5064800_91 alpha/beta hydrolase fold K01046 - 3.1.1.3 0.0005122 52.0
PJS3_k127_5064800_92 Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed K00632 - 2.3.1.16 0.0005298 45.0
PJS3_k127_5064800_93 - - - - 0.0009203 49.0
PJS3_k127_507985_0 Rhs Family - - - 0.0 3051.0
PJS3_k127_507985_1 Alpha-2-Macroglobulin K06894 - - 0.0 1443.0
PJS3_k127_507985_10 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 325.0
PJS3_k127_507985_11 AraC-like ligand binding domain K02099 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005717 253.0
PJS3_k127_507985_12 TetR family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000005739 242.0
PJS3_k127_507985_13 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000006913 231.0
PJS3_k127_507985_14 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K01825 - 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 0.000000000000000000000000000000000002701 143.0
PJS3_k127_507985_15 - - - - 0.000000000000000000000000000000006455 129.0
PJS3_k127_507985_16 An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH K00240,K09159 GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006105,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016043,GO:0016999,GO:0017013,GO:0017144,GO:0018065,GO:0018293,GO:0019538,GO:0019752,GO:0022607,GO:0034552,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0043648,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0045333,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072350,GO:1901564 1.3.5.1,1.3.5.4 0.000000000000000000003607 95.0
PJS3_k127_507985_17 COG1943 Transposase and inactivated derivatives - - - 0.000000000000000002036 85.0
PJS3_k127_507985_18 Protein involved in outer membrane biogenesis - - - 0.000002335 49.0
PJS3_k127_507985_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 1.677e-259 805.0
PJS3_k127_507985_3 COG1012 NAD-dependent aldehyde dehydrogenases K00140 - 1.2.1.18,1.2.1.27 4.53e-246 767.0
PJS3_k127_507985_4 exonuclease recJ K07462 - - 3.365e-240 756.0
PJS3_k127_507985_5 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 2.112e-221 713.0
PJS3_k127_507985_6 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 587.0
PJS3_k127_507985_7 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 557.0
PJS3_k127_507985_8 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 439.0
PJS3_k127_507985_9 enoyl-CoA hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 422.0
PJS3_k127_5096960_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1353.0
PJS3_k127_5096960_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00210,K00800 - 1.3.1.12,2.5.1.19 0.0 1094.0
PJS3_k127_5096960_10 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 536.0
PJS3_k127_5096960_11 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 520.0
PJS3_k127_5096960_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006358 463.0
PJS3_k127_5096960_13 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 413.0
PJS3_k127_5096960_14 reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 358.0
PJS3_k127_5096960_15 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 350.0
PJS3_k127_5096960_16 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 341.0
PJS3_k127_5096960_17 transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 317.0
PJS3_k127_5096960_18 haloacid dehalogenase-like hydrolase K22292 - 3.1.3.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 285.0
PJS3_k127_5096960_19 Belongs to the UPF0260 family K09160 - - 0.000000000000000000000000000000000000000000000000000007948 193.0
PJS3_k127_5096960_2 transport system, large permease component - - - 0.0 1013.0
PJS3_k127_5096960_20 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.000000000000000000000000000000000000000000002676 169.0
PJS3_k127_5096960_21 YcgL domain-containing protein K09902 - - 0.00000000000000000004326 93.0
PJS3_k127_5096960_22 - - - - 0.0000000000000000724 85.0
PJS3_k127_5096960_3 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 3.246e-259 803.0
PJS3_k127_5096960_4 unusual protein kinase - - - 4.555e-215 676.0
PJS3_k127_5096960_5 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 2.277e-196 623.0
PJS3_k127_5096960_6 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 561.0
PJS3_k127_5096960_7 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 556.0
PJS3_k127_5096960_8 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 542.0
PJS3_k127_5096960_9 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 541.0
PJS3_k127_5505184_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.853e-303 934.0
PJS3_k127_5505184_1 Cysteine desulfurase activator complex subunit SufB K09014 - - 5.465e-287 884.0
PJS3_k127_5505184_10 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 5.798e-195 615.0
PJS3_k127_5505184_11 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 623.0
PJS3_k127_5505184_12 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 610.0
PJS3_k127_5505184_13 Uncharacterised signal transduction histidine kinase domain (DUF2222) K20974 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 598.0
PJS3_k127_5505184_14 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 566.0
PJS3_k127_5505184_15 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 550.0
PJS3_k127_5505184_16 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 547.0
PJS3_k127_5505184_17 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 517.0
PJS3_k127_5505184_18 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046429,GO:0046490,GO:0046872,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 511.0
PJS3_k127_5505184_19 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 GO:0001522,GO:0003674,GO:0003824,GO:0004123,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009000,GO:0009058,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016769,GO:0016782,GO:0016783,GO:0016829,GO:0016846,GO:0018130,GO:0018131,GO:0019842,GO:0022607,GO:0030170,GO:0031071,GO:0031119,GO:0031163,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046484,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097163,GO:0140104,GO:1901360,GO:1901363 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 502.0
PJS3_k127_5505184_2 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 8.198e-279 863.0
PJS3_k127_5505184_20 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 494.0
PJS3_k127_5505184_21 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 488.0
PJS3_k127_5505184_22 Bacterial sugar transferase K21303 - 2.7.8.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 442.0
PJS3_k127_5505184_23 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 430.0
PJS3_k127_5505184_24 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 424.0
PJS3_k127_5505184_25 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 423.0
PJS3_k127_5505184_26 ABC-type transport system involved in Fe-S cluster assembly, ATPase component K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 414.0
PJS3_k127_5505184_27 serine acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 411.0
PJS3_k127_5505184_28 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005029 403.0
PJS3_k127_5505184_29 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 395.0
PJS3_k127_5505184_3 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.172e-264 822.0
PJS3_k127_5505184_30 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009411 368.0
PJS3_k127_5505184_31 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009652 363.0
PJS3_k127_5505184_32 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008982 353.0
PJS3_k127_5505184_33 O-Antigen Polymerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 362.0
PJS3_k127_5505184_34 protein involved in exopolysaccharide biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 349.0
PJS3_k127_5505184_35 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 331.0
PJS3_k127_5505184_36 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 329.0
PJS3_k127_5505184_37 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 329.0
PJS3_k127_5505184_38 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009398 327.0
PJS3_k127_5505184_39 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007102 315.0
PJS3_k127_5505184_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 1.365e-261 821.0
PJS3_k127_5505184_40 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007438 296.0
PJS3_k127_5505184_41 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 292.0
PJS3_k127_5505184_42 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007978 298.0
PJS3_k127_5505184_43 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006464,GO:0006479,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010468,GO:0016043,GO:0016740,GO:0016741,GO:0018364,GO:0019222,GO:0019538,GO:0022411,GO:0032259,GO:0032984,GO:0034641,GO:0034645,GO:0036009,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043414,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 288.0
PJS3_k127_5505184_44 metal-sulfur cluster biosynthetic enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001982 277.0
PJS3_k127_5505184_45 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000101 258.0
PJS3_k127_5505184_46 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000000001576 249.0
PJS3_k127_5505184_47 Uncharacterized protein family, UPF0114 - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000003851 247.0
PJS3_k127_5505184_48 Sugar ABC transporter substrate-binding protein K01991 - - 0.000000000000000000000000000000000000000000000000000000000000003406 222.0
PJS3_k127_5505184_49 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 - - 0.000000000000000000000000000000000000000000000000000000000000006321 220.0
PJS3_k127_5505184_5 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 2.437e-214 688.0
PJS3_k127_5505184_50 COG3063 Tfp pilus assembly protein PilF K02656 - - 0.00000000000000000000000000000000000000000000000000000000000001066 224.0
PJS3_k127_5505184_51 membrane protein domain - - - 0.000000000000000000000000000000000000000000000000000000000001685 213.0
PJS3_k127_5505184_52 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.00000000000000000000000000000000000000000000000000000005877 202.0
PJS3_k127_5505184_53 Fe-S metabolism associated domain - - - 0.0000000000000000000000000000000000000000000000000004969 188.0
PJS3_k127_5505184_54 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000001919 179.0
PJS3_k127_5505184_55 COG0489 ATPases involved in chromosome partitioning - - - 0.000000000000000000000000000000000000000000002363 174.0
PJS3_k127_5505184_56 protein conserved in bacteria K15539 - - 0.000000000000000000000000000000000000000000542 168.0
PJS3_k127_5505184_57 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000006264 166.0
PJS3_k127_5505184_58 Preprotein translocase subunit YajC K03210 - - 0.00000000000000000000000000000000000018 143.0
PJS3_k127_5505184_59 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000857 148.0
PJS3_k127_5505184_6 COG2217 Cation transport ATPase K01533 - 3.6.3.4 4.385e-211 685.0
PJS3_k127_5505184_60 Belongs to the HesB IscA family K05997,K13628 - - 0.00000000000000000000000000000000006097 136.0
PJS3_k127_5505184_61 TIGRFAM Hydrolase, ortholog 1, exosortase system type 1 associated - - - 0.0000000000000000000000000000001041 137.0
PJS3_k127_5505184_62 - - - - 0.0000000000000000000000000000002099 139.0
PJS3_k127_5505184_63 Pkd domain containing protein - - - 0.000000000000000000000000000003153 136.0
PJS3_k127_5505184_64 lipopolysaccharide biosynthesis protein - - - 0.00000000000000000000000000003836 128.0
PJS3_k127_5505184_65 DUF218 domain - - - 0.000000000000000000000000006701 119.0
PJS3_k127_5505184_66 Phosphopantetheine attachment site - - - 0.0000000000000000000001006 99.0
PJS3_k127_5505184_67 transport system, periplasmic component - - - 0.00000000000000000479 94.0
PJS3_k127_5505184_68 Cbb3-type cytochrome oxidase component FixQ K00407 - - 0.000000000000004191 76.0
PJS3_k127_5505184_69 Serine aminopeptidase, S33 - - - 0.00000000006287 73.0
PJS3_k127_5505184_7 histidyl-tRNA synthetase K01892 - 6.1.1.21 7.104e-208 654.0
PJS3_k127_5505184_70 Putative beta-barrel porin 2 - - - 0.000000002683 69.0
PJS3_k127_5505184_71 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0043021,GO:0043022,GO:0043023,GO:0043086,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0098772 - 0.000000007248 62.0
PJS3_k127_5505184_72 Cytochrome oxidase maturation protein - - - 0.000000007917 63.0
PJS3_k127_5505184_74 DnaJ domain K09510 - - 0.000006419 57.0
PJS3_k127_5505184_8 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 9.991e-206 644.0
PJS3_k127_5505184_9 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 3.883e-195 613.0
PJS3_k127_5554706_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1139.0
PJS3_k127_5554706_1 Oligopeptidase K01414 - 3.4.24.70 0.0 1058.0
PJS3_k127_5554706_10 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005955 367.0
PJS3_k127_5554706_11 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 333.0
PJS3_k127_5554706_12 stress-induced protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 334.0
PJS3_k127_5554706_13 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121 308.0
PJS3_k127_5554706_14 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003849 299.0
PJS3_k127_5554706_15 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 292.0
PJS3_k127_5554706_16 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 286.0
PJS3_k127_5554706_17 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 295.0
PJS3_k127_5554706_18 Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions K05501 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000918,GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0007049,GO:0007346,GO:0008150,GO:0009295,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010564,GO:0010948,GO:0010974,GO:0016043,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0031323,GO:0031326,GO:0031333,GO:0032271,GO:0032272,GO:0032465,GO:0032466,GO:0032506,GO:0032954,GO:0032955,GO:0042802,GO:0043085,GO:0043087,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043547,GO:0043565,GO:0043590,GO:0044085,GO:0044087,GO:0044093,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045786,GO:0045930,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051252,GO:0051301,GO:0051302,GO:0051336,GO:0051345,GO:0051726,GO:0051782,GO:0060255,GO:0061640,GO:0065007,GO:0065009,GO:0071840,GO:0080090,GO:0090529,GO:0097159,GO:0140110,GO:1901363,GO:1901891,GO:1901892,GO:1902410,GO:1902412,GO:1902413,GO:1903047,GO:1903436,GO:1903437,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006734 259.0
PJS3_k127_5554706_19 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000001293 253.0
PJS3_k127_5554706_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 6.676e-248 784.0
PJS3_k127_5554706_20 Nucleoside 2-deoxyribosyltransferase YtoQ - - - 0.000000000000000000000000000000000000000000000000000000000000004581 219.0
PJS3_k127_5554706_21 endoribonuclease - - - 0.000000000000000000000000000000000000000000000000000000004485 202.0
PJS3_k127_5554706_22 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000001006 188.0
PJS3_k127_5554706_23 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000000000000000007831 143.0
PJS3_k127_5554706_24 Gaf domain K01768,K17763 - 4.6.1.1 0.000000000000000000000000000000003267 133.0
PJS3_k127_5554706_25 Pfam Transposase IS66 - - - 0.0000000000000000000000000000007277 129.0
PJS3_k127_5554706_26 nucleic-acid-binding protein containing a Zn-ribbon domain K07070 - - 0.0000000000000000003967 91.0
PJS3_k127_5554706_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 3.296e-222 693.0
PJS3_k127_5554706_4 phosphomannomutase K15778 - 5.4.2.2,5.4.2.8 2.688e-202 657.0
PJS3_k127_5554706_5 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0003824,GO:0004109,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016634,GO:0018130,GO:0019438,GO:0030145,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0046983,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 509.0
PJS3_k127_5554706_6 transcriptional regulator K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004957 499.0
PJS3_k127_5554706_7 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930,K22478 - 2.3.1.1,2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 483.0
PJS3_k127_5554706_8 protein containing LysM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 426.0
PJS3_k127_5554706_9 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006048 389.0
PJS3_k127_5588529_0 atpase related to the helicase subunit of the holliday junction resolvase K07478 - - 3.681e-294 908.0
PJS3_k127_5588529_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.124e-202 637.0
PJS3_k127_5588529_10 TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003817 385.0
PJS3_k127_5588529_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 372.0
PJS3_k127_5588529_12 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 362.0
PJS3_k127_5588529_13 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 357.0
PJS3_k127_5588529_14 dienelactone hydrolase K21104 - 3.1.1.101 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 346.0
PJS3_k127_5588529_15 DNA polymerase III subunit delta K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 339.0
PJS3_k127_5588529_16 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000005156 253.0
PJS3_k127_5588529_17 SpoIIAA-like - - - 0.000000000000000000000000000000000000000000000000000000000000009049 217.0
PJS3_k127_5588529_18 protein conserved in bacteria K09986 - - 0.00000000000000000000000000000000000000000000000000000000000003964 218.0
PJS3_k127_5588529_19 MOSC N-terminal beta barrel domain K07140 - - 0.00000000000000000000000000000000000000000000000000000000001239 218.0
PJS3_k127_5588529_2 chitin binding K21712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 590.0
PJS3_k127_5588529_20 Pilus assembly protein PilZ K02676 - - 0.00000000000000000000000000000000000000000000000000000000001468 207.0
PJS3_k127_5588529_21 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K02619 - 4.1.3.38 0.00000000000000000000000000000000000000000000000000000000004907 215.0
PJS3_k127_5588529_22 Protein of unknown function (DUF1569) - - - 0.0000000000000000000000000000000000000000000000000000004347 198.0
PJS3_k127_5588529_23 Transcription factor zinc-finger - - - 0.0000000000000000000000000000000000000000000000000001605 190.0
PJS3_k127_5588529_24 - - - - 0.000000000000000000000000000000000000000000000000005765 186.0
PJS3_k127_5588529_25 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.00000000000000000000000000000000000000001563 167.0
PJS3_k127_5588529_26 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000006037 136.0
PJS3_k127_5588529_27 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000002339 139.0
PJS3_k127_5588529_28 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000008753 119.0
PJS3_k127_5588529_29 Probable zinc-ribbon domain - - - 0.00000000000000000002507 94.0
PJS3_k127_5588529_3 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005759 504.0
PJS3_k127_5588529_30 DsrE/DsrF-like family - - - 0.000000000000001106 83.0
PJS3_k127_5588529_31 Protein of unknown function (DUF2986) - - - 0.00000001633 57.0
PJS3_k127_5588529_32 - - - - 0.0004308 46.0
PJS3_k127_5588529_4 protein conserved in bacteria K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 479.0
PJS3_k127_5588529_5 COG0520 Selenocysteine lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 471.0
PJS3_k127_5588529_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 425.0
PJS3_k127_5588529_7 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 418.0
PJS3_k127_5588529_8 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase K07006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 405.0
PJS3_k127_5588529_9 COG1943 Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 399.0
PJS3_k127_5648797_0 accessory protein K06959 - - 0.0 1139.0
PJS3_k127_5648797_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1114.0
PJS3_k127_5648797_10 hydrolase of alkaline phosphatase superfamily K07014 - - 1.075e-208 666.0
PJS3_k127_5648797_11 Acyltransferase - GO:0000271,GO:0005575,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016020,GO:0016051,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 5.888e-208 665.0
PJS3_k127_5648797_12 7 transmembrane helices usually fused to an inactive transglutaminase - - - 3.297e-206 652.0
PJS3_k127_5648797_13 NADH dehydrogenase K03885 - 1.6.99.3 6.191e-203 639.0
PJS3_k127_5648797_14 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 621.0
PJS3_k127_5648797_15 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 591.0
PJS3_k127_5648797_16 Histidine kinase K07638 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005465 546.0
PJS3_k127_5648797_17 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008128 544.0
PJS3_k127_5648797_18 COG0642 Signal transduction histidine kinase K20971 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 548.0
PJS3_k127_5648797_19 amino acid aldolase or racemase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 515.0
PJS3_k127_5648797_2 GTP-binding protein TypA K06207 - - 0.0 1013.0
PJS3_k127_5648797_20 COG0277 FAD FMN-containing dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 491.0
PJS3_k127_5648797_21 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 469.0
PJS3_k127_5648797_22 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 456.0
PJS3_k127_5648797_23 a g-specific adenine glycosylase K03575 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004218 447.0
PJS3_k127_5648797_24 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 434.0
PJS3_k127_5648797_25 COG3555 Aspartyl asparaginyl beta-hydroxylase and related dioxygenases K12979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005211 431.0
PJS3_k127_5648797_26 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 403.0
PJS3_k127_5648797_27 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 381.0
PJS3_k127_5648797_28 Na -dependent transporter K03453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009669 362.0
PJS3_k127_5648797_29 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 354.0
PJS3_k127_5648797_3 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 8.607e-298 925.0
PJS3_k127_5648797_30 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 356.0
PJS3_k127_5648797_31 nucleotidase K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 345.0
PJS3_k127_5648797_32 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 340.0
PJS3_k127_5648797_33 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 343.0
PJS3_k127_5648797_34 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 319.0
PJS3_k127_5648797_35 Lysylphosphatidylglycerol synthase TM region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 318.0
PJS3_k127_5648797_36 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 310.0
PJS3_k127_5648797_37 effector of murein hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009536 312.0
PJS3_k127_5648797_38 hydrolase K20881 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 301.0
PJS3_k127_5648797_39 START domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006235 296.0
PJS3_k127_5648797_4 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 1.321e-290 899.0
PJS3_k127_5648797_40 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K08312 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 289.0
PJS3_k127_5648797_41 protein conserved in bacteria K09798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002901 284.0
PJS3_k127_5648797_42 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008841 279.0
PJS3_k127_5648797_43 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004112 258.0
PJS3_k127_5648797_44 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004804 246.0
PJS3_k127_5648797_45 Pyridoxal-phosphate dependent enzyme K01505 - 3.5.99.7 0.000000000000000000000000000000000000000000000000000000000000000001942 240.0
PJS3_k127_5648797_46 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.000000000000000000000000000000000000000000000000000000000000000769 224.0
PJS3_k127_5648797_47 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000000000000000000001474 213.0
PJS3_k127_5648797_48 COG0784 FOG CheY-like receiver K02658 - - 0.000000000000000000000000000000000000000000000000000000000002929 210.0
PJS3_k127_5648797_49 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000000000000000000000000000000000000003158 211.0
PJS3_k127_5648797_5 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 3.281e-253 783.0
PJS3_k127_5648797_50 - - - - 0.00000000000000000000000000000000000000000000000000000000003843 216.0
PJS3_k127_5648797_51 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000000000000005445 206.0
PJS3_k127_5648797_52 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03773 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000006213 201.0
PJS3_k127_5648797_53 Sulfurtransferase - - - 0.000000000000000000000000000000000000000000000000000005082 193.0
PJS3_k127_5648797_54 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000000000000000000008695 190.0
PJS3_k127_5648797_55 Bacterial-like globin K06886 - - 0.000000000000000000000000000000000000000000000000002041 185.0
PJS3_k127_5648797_56 Belongs to the Rsd AlgQ family K07740 - - 0.000000000000000000000000000000000000000000000006954 177.0
PJS3_k127_5648797_57 RHS Repeat - - - 0.0000000000000000000000000000000000000000001127 166.0
PJS3_k127_5648797_58 protein conserved in archaea - - - 0.0000000000000000000000000000000000000007779 157.0
PJS3_k127_5648797_59 protein conserved in bacteria K09948 - - 0.000000000000000000000000000000000000001377 150.0
PJS3_k127_5648797_6 protein involved in outer membrane biogenesis K07289 - - 1.107e-248 788.0
PJS3_k127_5648797_60 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000000000000000000000000000001413 145.0
PJS3_k127_5648797_61 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009987,GO:0016070,GO:0033554,GO:0034605,GO:0034641,GO:0043021,GO:0043023,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000001351 141.0
PJS3_k127_5648797_62 Effector of murein hydrolase LrgA K05338,K06518 GO:0000270,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0006810,GO:0008104,GO:0008150,GO:0008152,GO:0008565,GO:0009056,GO:0009057,GO:0009253,GO:0015031,GO:0015833,GO:0016020,GO:0030203,GO:0033036,GO:0042886,GO:0043170,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000002447 126.0
PJS3_k127_5648797_63 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000000000000000000000001403 122.0
PJS3_k127_5648797_64 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000000002108 113.0
PJS3_k127_5648797_65 Protein of unknown function (DUF2390) - - - 0.000000000000000000000000002349 117.0
PJS3_k127_5648797_68 highly regulated protein controlled by the addition removal of adenylyl groups by adenylyltransferase from specific tyrosine residues K01915 - 6.3.1.2 0.00000000004487 65.0
PJS3_k127_5648797_7 ABC transporter ATP-binding protein K06158 - - 5.895e-238 752.0
PJS3_k127_5648797_70 - - - - 0.0000004889 54.0
PJS3_k127_5648797_71 - - - - 0.0002679 52.0
PJS3_k127_5648797_8 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 8.298e-232 727.0
PJS3_k127_5648797_9 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 9.743e-226 709.0
PJS3_k127_5857610_0 Bacterial Ig-like domain - - - 0.0 1642.0
PJS3_k127_5857610_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1082.0
PJS3_k127_5857610_10 acyl-CoA dehydrogenase K11731 - - 8.251e-231 717.0
PJS3_k127_5857610_11 Belongs to the 'phage' integrase family - - - 1.035e-227 711.0
PJS3_k127_5857610_12 acyl-CoA dehydrogenase - - - 3.544e-216 674.0
PJS3_k127_5857610_13 protein conserved in bacteria - - - 3.657e-208 653.0
PJS3_k127_5857610_14 Transposase - - - 5.155e-197 625.0
PJS3_k127_5857610_15 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007816 576.0
PJS3_k127_5857610_16 COG1960 Acyl-CoA dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 569.0
PJS3_k127_5857610_17 Metal-dependent hydrolase K07044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 516.0
PJS3_k127_5857610_18 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K13774 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007397 500.0
PJS3_k127_5857610_19 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008976 499.0
PJS3_k127_5857610_2 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K13776 - - 3e-323 998.0
PJS3_k127_5857610_20 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 498.0
PJS3_k127_5857610_21 Metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 477.0
PJS3_k127_5857610_22 Domain of unknown function (DUF4872) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 471.0
PJS3_k127_5857610_23 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003621 451.0
PJS3_k127_5857610_24 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 432.0
PJS3_k127_5857610_25 enoyl-CoA hydratase K13779 - 4.2.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 389.0
PJS3_k127_5857610_26 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 385.0
PJS3_k127_5857610_27 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 333.0
PJS3_k127_5857610_28 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002971 282.0
PJS3_k127_5857610_29 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002464 251.0
PJS3_k127_5857610_3 Pfam:DUF1446 - - - 1.136e-307 951.0
PJS3_k127_5857610_30 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000004874 242.0
PJS3_k127_5857610_31 ubiquinone biosynthetic process from chorismate K03690 - - 0.000000000000000000000000000000000000000000000000000000000002215 217.0
PJS3_k127_5857610_32 protein possibly involved in aromatic compounds catabolism - - - 0.0000000000000000000000000000000000000000000000000004587 188.0
PJS3_k127_5857610_33 Poly(hydroxyalcanoate) granule associated protein (phasin) - - - 0.000000000000000000000000000000000000000000000008204 177.0
PJS3_k127_5857610_34 protein possibly involved in aromatic compounds catabolism - - - 0.00000000000000000000000000000000000000001167 158.0
PJS3_k127_5857610_35 aminopeptidase N K01256 - 3.4.11.2 0.000000000000000000000000000000000000001575 151.0
PJS3_k127_5857610_36 protein conserved in bacteria K09916 - - 0.0000000000000000000000003371 108.0
PJS3_k127_5857610_4 flavoprotein involved in K transport - - - 3.655e-295 909.0
PJS3_k127_5857610_40 - - - - 0.0000000000000000188 84.0
PJS3_k127_5857610_42 Bacterial regulatory proteins, tetR family K09017 - - 0.00000000006247 71.0
PJS3_k127_5857610_43 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000007374 64.0
PJS3_k127_5857610_5 Belongs to the GMC oxidoreductase family - - - 9.097e-285 881.0
PJS3_k127_5857610_6 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 1.594e-282 873.0
PJS3_k127_5857610_7 Acetyl propionyl-CoA carboxylase, alpha subunit K13777 - 6.4.1.5 5.814e-275 861.0
PJS3_k127_5857610_8 Acetyl-CoA carboxylase K13778 - 6.4.1.5 2.115e-270 841.0
PJS3_k127_5857610_9 COG2067 Long-chain fatty acid transport protein - - - 1.216e-245 763.0
PJS3_k127_5928834_0 L-lysine 6-monooxygenase (NADPH-requiring) K07222 - - 5.1e-198 625.0
PJS3_k127_5928834_1 COG0451 Nucleoside-diphosphate-sugar epimerases K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006711 404.0
PJS3_k127_5928834_10 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000003076 186.0
PJS3_k127_5928834_11 thiol-disulphide oxidoreductase DCC - - - 0.000000000000000000000000000000315 128.0
PJS3_k127_5928834_12 FecR protein - - - 0.00000000000000000001653 106.0
PJS3_k127_5928834_13 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000005129 80.0
PJS3_k127_5928834_2 COG1024 Enoyl-CoA hydratase carnithine racemase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 388.0
PJS3_k127_5928834_3 Bile acid sodium symporter K03453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 353.0
PJS3_k127_5928834_4 AraC family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007928 346.0
PJS3_k127_5928834_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 319.0
PJS3_k127_5928834_6 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002419 259.0
PJS3_k127_5928834_7 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003274 248.0
PJS3_k127_5928834_8 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000925 227.0
PJS3_k127_5928834_9 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.000000000000000000000000000000000000000000000000000000000001387 220.0
PJS3_k127_5955801_0 Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate K00265 - 1.4.1.13,1.4.1.14 0.0 2532.0
PJS3_k127_5955801_1 Domain of unknown function (DUF4145) K01153 - 3.1.21.3 0.0 1892.0
PJS3_k127_5955801_10 Fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 576.0
PJS3_k127_5955801_11 Glutathione S-transferase, C-terminal domain K07393 - 1.8.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 510.0
PJS3_k127_5955801_12 Fic/DOC family N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009709 505.0
PJS3_k127_5955801_13 COG3243 Poly(3-hydroxyalkanoate) synthetase K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 485.0
PJS3_k127_5955801_14 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 482.0
PJS3_k127_5955801_15 May be involved in recombination K03554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 459.0
PJS3_k127_5955801_16 Type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005268 464.0
PJS3_k127_5955801_17 Belongs to the MtfA family K09933 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006508,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009889,GO:0010468,GO:0010556,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0043170,GO:0043433,GO:0044092,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0048519,GO:0050789,GO:0050794,GO:0051090,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0065009,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 446.0
PJS3_k127_5955801_18 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008232 426.0
PJS3_k127_5955801_19 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 429.0
PJS3_k127_5955801_2 HsdM N-terminal domain K03427 - 2.1.1.72 1.44e-320 984.0
PJS3_k127_5955801_20 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008139 424.0
PJS3_k127_5955801_21 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007376 411.0
PJS3_k127_5955801_22 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009671 396.0
PJS3_k127_5955801_23 Transcriptional regulator, AbiEi antitoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 354.0
PJS3_k127_5955801_24 fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 349.0
PJS3_k127_5955801_25 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 339.0
PJS3_k127_5955801_26 Protein of unknown function (DUF3800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009723 324.0
PJS3_k127_5955801_27 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 312.0
PJS3_k127_5955801_28 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003688 297.0
PJS3_k127_5955801_29 Belongs to the ComB family K05979 - 3.1.3.71 0.000000000000000000000000000000000000000000000000000000000000000000000000000003507 267.0
PJS3_k127_5955801_3 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 8.375e-284 875.0
PJS3_k127_5955801_30 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000008503 265.0
PJS3_k127_5955801_31 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003904 267.0
PJS3_k127_5955801_32 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000004948 264.0
PJS3_k127_5955801_33 Fic/DOC family K04095 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002265 261.0
PJS3_k127_5955801_34 Transglycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003831 253.0
PJS3_k127_5955801_35 Transcriptional K03719 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007237 248.0
PJS3_k127_5955801_36 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 GO:0003674,GO:0003824,GO:0004638,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0016853,GO:0016866,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034023,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000002917 246.0
PJS3_k127_5955801_38 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000311 234.0
PJS3_k127_5955801_39 Flavodoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000218 229.0
PJS3_k127_5955801_4 COG1132 ABC-type multidrug transport system, ATPase and permease components K06147,K18893 - - 2.503e-266 832.0
PJS3_k127_5955801_40 TQO small subunit DoxD K15977 - - 0.0000000000000000000000000000000000000000000000000000000000000001797 224.0
PJS3_k127_5955801_41 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000002418 213.0
PJS3_k127_5955801_42 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.0000000000000000000000000000000000000000000000000000003602 205.0
PJS3_k127_5955801_43 - - - - 0.000000000000000000000000000000000000000000000000000004684 195.0
PJS3_k127_5955801_44 Competence protein - - - 0.0000000000000000000000000000000000000000000000003416 184.0
PJS3_k127_5955801_45 FlgJ-related protein K03796 - - 0.00000000000000000000000000000000000000000000003359 179.0
PJS3_k127_5955801_46 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000000000000001384 167.0
PJS3_k127_5955801_47 Virulence protein RhuM family - - - 0.000000000000000000000000000000000000001192 151.0
PJS3_k127_5955801_48 NlpE C-terminal OB domain - - - 0.00000000000000000000000000003564 127.0
PJS3_k127_5955801_49 Virulence protein RhuM family - - - 0.0000000000000000000000001375 108.0
PJS3_k127_5955801_5 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 2.038e-248 778.0
PJS3_k127_5955801_51 Opacity protein and related surface antigens K16079 - - 0.000000000001793 75.0
PJS3_k127_5955801_53 Outer membrane protein beta-barrel domain K16079 - - 0.000000009352 64.0
PJS3_k127_5955801_54 Periplasmic or secreted lipoprotein - - - 0.0000000958 58.0
PJS3_k127_5955801_56 - - - - 0.0002123 47.0
PJS3_k127_5955801_57 Outer membrane protein beta-barrel domain K16079 - - 0.000558 50.0
PJS3_k127_5955801_6 - - - - 9.767e-221 687.0
PJS3_k127_5955801_7 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 2.764e-199 624.0
PJS3_k127_5955801_8 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006775 590.0
PJS3_k127_5955801_9 membrane-associated, metal-dependent hydrolase K03760,K12975,K19353 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008654,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016772,GO:0016776,GO:0016780,GO:0019637,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0043838,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0046401,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.7.8.42,2.7.8.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000839 601.0
PJS3_k127_5968388_0 Putative diguanylate phosphodiesterase K21025 - - 9.552e-282 880.0
PJS3_k127_5968388_1 phosphoserine phosphatase K01079 - 3.1.3.3 1.516e-210 660.0
PJS3_k127_5968388_10 Lysine 2,3-aminomutase YodO family protein K01843,K19810 GO:0003674,GO:0003824,GO:0005488,GO:0016853,GO:0016866,GO:0016869,GO:0048037,GO:0051536,GO:0051539,GO:0051540 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 344.0
PJS3_k127_5968388_12 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005997 250.0
PJS3_k127_5968388_15 - - - - 0.0000000000000000000001331 99.0
PJS3_k127_5968388_16 TM2 domain - - - 0.000000000003759 78.0
PJS3_k127_5968388_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 609.0
PJS3_k127_5968388_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 463.0
PJS3_k127_5968388_4 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 402.0
PJS3_k127_5968388_5 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 392.0
PJS3_k127_5968388_6 Elongation factor P--(R)-beta-lysine ligase K04568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 361.0
PJS3_k127_5968388_7 Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 359.0
PJS3_k127_5968388_8 COG3547 Transposase and inactivated derivatives K07486 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 351.0
PJS3_k127_5968388_9 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007721 342.0
PJS3_k127_6021650_0 COG4206 Outer membrane cobalamin receptor protein K16092 - - 3.805e-274 856.0
PJS3_k127_6021650_1 Amidohydrolase family - - - 9.462e-254 794.0
PJS3_k127_6021650_10 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 449.0
PJS3_k127_6021650_11 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000847 413.0
PJS3_k127_6021650_12 COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006019 409.0
PJS3_k127_6021650_13 KR domain K07124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006734 385.0
PJS3_k127_6021650_14 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 368.0
PJS3_k127_6021650_15 Histidinol-phosphate aromatic aminotransferase and cobyric acid decarboxylase K02225 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 361.0
PJS3_k127_6021650_16 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007258 344.0
PJS3_k127_6021650_17 May be involved in the folding of the extracellular lipase during its passage through the periplasm - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009182 346.0
PJS3_k127_6021650_18 COG0406 Fructose-2,6-bisphosphatase K02226 - 3.1.3.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 327.0
PJS3_k127_6021650_19 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 333.0
PJS3_k127_6021650_2 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 6.007e-238 743.0
PJS3_k127_6021650_20 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 317.0
PJS3_k127_6021650_21 LuxR family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 297.0
PJS3_k127_6021650_22 Protein of unknown function (DUF2505) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003788 272.0
PJS3_k127_6021650_23 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000241 260.0
PJS3_k127_6021650_24 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.000000000000000000000000000000000000000000000000000000000000000000000005452 252.0
PJS3_k127_6021650_25 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000000000000000000000000005483 241.0
PJS3_k127_6021650_26 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001876 235.0
PJS3_k127_6021650_27 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000004099 218.0
PJS3_k127_6021650_28 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000006471 225.0
PJS3_k127_6021650_29 Response regulator receiver K07657 - - 0.0000000000000000000000000000000000000000000000000000001984 201.0
PJS3_k127_6021650_3 cellulose binding - - - 2.459e-203 656.0
PJS3_k127_6021650_30 Domain of unknown function (DUF4347) K20276 - - 0.000000000000000000000000000000000000001276 173.0
PJS3_k127_6021650_31 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000006576 141.0
PJS3_k127_6021650_32 Thrombospondin type 3 repeat K03286 - - 0.0000000000000000000000000001592 136.0
PJS3_k127_6021650_33 Sensors of blue-light using FAD - - - 0.000000000000000000000001799 108.0
PJS3_k127_6021650_34 outer membrane autotransporter barrel domain - - - 0.000000000000000000001001 113.0
PJS3_k127_6021650_35 - - - - 0.000000000000001083 85.0
PJS3_k127_6021650_4 diguanylate cyclase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009424 599.0
PJS3_k127_6021650_5 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 580.0
PJS3_k127_6021650_6 nitrite reductase K00368 - 1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 571.0
PJS3_k127_6021650_7 Sodium:dicarboxylate symporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 539.0
PJS3_k127_6021650_8 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 503.0
PJS3_k127_6021650_9 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 454.0
PJS3_k127_6092626_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 4.134e-279 862.0
PJS3_k127_6092626_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 3.331e-251 782.0
PJS3_k127_6092626_10 RHS Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005447 449.0
PJS3_k127_6092626_11 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 418.0
PJS3_k127_6092626_12 hydroxylase K18800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008571 413.0
PJS3_k127_6092626_13 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 387.0
PJS3_k127_6092626_14 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 316.0
PJS3_k127_6092626_15 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000007542 251.0
PJS3_k127_6092626_16 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 GO:0001505,GO:0003674,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0017144,GO:0019464,GO:0019752,GO:0031405,GO:0031406,GO:0033293,GO:0036094,GO:0042133,GO:0042135,GO:0042737,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0065007,GO:0065008,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901681 - 0.0000000000000000000000000000000000000000000000000000001609 196.0
PJS3_k127_6092626_17 Methyltransferase type 12 - - - 0.000000000000000000000000000000000000000000000000003351 192.0
PJS3_k127_6092626_18 Belongs to the UPF0149 family K09895 - - 0.00000000000000000000000000000000000000000000008413 175.0
PJS3_k127_6092626_19 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000004227 168.0
PJS3_k127_6092626_2 Bacterial Ig-like domain - - - 4.092e-247 798.0
PJS3_k127_6092626_20 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000000000003712 117.0
PJS3_k127_6092626_21 TIGRFAM TIGR02449 family protein K09892 - - 0.00000000000000000004646 91.0
PJS3_k127_6092626_3 Belongs to the peptidase M24B family K01262 - 3.4.11.9 2.585e-223 702.0
PJS3_k127_6092626_4 Bacterial Ig-like domain - - - 8.726e-221 722.0
PJS3_k127_6092626_5 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 1.438e-220 692.0
PJS3_k127_6092626_6 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 535.0
PJS3_k127_6092626_7 COG2067 Long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004175 536.0
PJS3_k127_6092626_8 COG2067 Long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 516.0
PJS3_k127_6092626_9 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 456.0
PJS3_k127_6134674_0 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 - 2.3.3.9 0.0 1122.0
PJS3_k127_6134674_1 COG2303 Choline dehydrogenase and related flavoproteins K03333 - 1.1.3.6 4.706e-248 775.0
PJS3_k127_6134674_10 Belongs to the UPF0149 family K07039 - - 0.000000000000000000000000000000000000000000000000000000458 199.0
PJS3_k127_6134674_11 Membrane - - - 0.00000000000000000000000000000000000000000000000004106 186.0
PJS3_k127_6134674_12 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000006428 140.0
PJS3_k127_6134674_13 Belongs to the BolA IbaG family K05527 - - 0.00000000000000000000000000000009551 126.0
PJS3_k127_6134674_14 Protein of unknown function (DUF2914) - - - 0.000000000000000001367 97.0
PJS3_k127_6134674_16 Transcriptional regulators - - - 0.00001427 48.0
PJS3_k127_6134674_2 acyl-CoA dehydrogenase K00249 - 1.3.8.7 1.93e-202 636.0
PJS3_k127_6134674_3 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 498.0
PJS3_k127_6134674_4 Belongs to the UPF0176 family K07146 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 492.0
PJS3_k127_6134674_5 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 422.0
PJS3_k127_6134674_6 GGDEF domain K21019 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 382.0
PJS3_k127_6134674_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 362.0
PJS3_k127_6134674_8 PFAM Prolipoprotein diacylglyceryl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008251 365.0
PJS3_k127_6134674_9 permease K11744 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0009372,GO:0009987,GO:0015562,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0044764,GO:0051179,GO:0051234,GO:0051704,GO:0055085,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007082 332.0
PJS3_k127_6183613_0 Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA K00219 - 1.3.1.34 3.53e-317 983.0
PJS3_k127_6183613_1 mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth K15738 - - 7.287e-283 881.0
PJS3_k127_6183613_10 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 546.0
PJS3_k127_6183613_11 COG3639 ABC-type phosphate phosphonate transport system, permease component K02042 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 545.0
PJS3_k127_6183613_12 desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006731 494.0
PJS3_k127_6183613_13 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 486.0
PJS3_k127_6183613_14 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 478.0
PJS3_k127_6183613_15 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 483.0
PJS3_k127_6183613_16 Acyl dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 434.0
PJS3_k127_6183613_17 desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 421.0
PJS3_k127_6183613_18 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 402.0
PJS3_k127_6183613_19 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 346.0
PJS3_k127_6183613_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 7.189e-247 782.0
PJS3_k127_6183613_20 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 343.0
PJS3_k127_6183613_21 PhzC PhzF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009387 306.0
PJS3_k127_6183613_22 endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 302.0
PJS3_k127_6183613_23 D-alanine [D-alanyl carrier protein] ligase activity - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001637 289.0
PJS3_k127_6183613_24 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002157 281.0
PJS3_k127_6183613_25 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005893 259.0
PJS3_k127_6183613_26 tonB-system energizer ExbB K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001651 263.0
PJS3_k127_6183613_27 ABC transporter, ATP-binding protein K02041 - 3.6.3.28 0.000000000000000000000000000000000000000000000000000000000000000000000000003414 259.0
PJS3_k127_6183613_28 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000002127 240.0
PJS3_k127_6183613_29 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000004677 209.0
PJS3_k127_6183613_3 COG3264 Small-conductance mechanosensitive channel K05802 - - 8.748e-244 792.0
PJS3_k127_6183613_30 SMART HNH nuclease - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000003518 193.0
PJS3_k127_6183613_31 Glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.0000000000000000000000000000000000000000000009739 169.0
PJS3_k127_6183613_32 Biopolymer transport protein K03559 - - 0.0000000000000000000000000000000000000000001742 162.0
PJS3_k127_6183613_33 - - - - 0.0000000000000000000000000000000000002151 143.0
PJS3_k127_6183613_34 Ion channel - - - 0.0000000000000000000000001987 108.0
PJS3_k127_6183613_36 COG0810 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.0000000000000006703 86.0
PJS3_k127_6183613_4 Belongs to the thiolase family K00626 - 2.3.1.9 1.33e-235 736.0
PJS3_k127_6183613_5 Belongs to the selenophosphate synthase 1 family. Class I subfamily K01008 - 2.7.9.3 2.112e-202 653.0
PJS3_k127_6183613_6 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 7.46e-202 638.0
PJS3_k127_6183613_7 COG3000 Sterol desaturase K00227 - 1.14.19.20 5.566e-195 613.0
PJS3_k127_6183613_8 - - - - 3.356e-194 610.0
PJS3_k127_6183613_9 Histidine kinase K20972 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 621.0
PJS3_k127_6290825_0 COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins K03466 GO:0000920,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006950,GO:0006970,GO:0007059,GO:0008094,GO:0008150,GO:0009628,GO:0009651,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0015616,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033676,GO:0042221,GO:0042623,GO:0042802,GO:0043085,GO:0043565,GO:0044093,GO:0044425,GO:0044459,GO:0044464,GO:0045893,GO:0045935,GO:0046677,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051301,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0070887,GO:0071236,GO:0071944,GO:0080090,GO:0097159,GO:0140097,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 8.091e-289 906.0
PJS3_k127_6290825_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 1.177e-212 667.0
PJS3_k127_6290825_10 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000000000000005573 146.0
PJS3_k127_6290825_11 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000000003947 138.0
PJS3_k127_6290825_12 DsrE/DsrF-like family K07235 GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0019417,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055114,GO:0071704,GO:0090304,GO:0097163,GO:0140104,GO:1901360,GO:1902494,GO:1990228,GO:1990234 - 0.0000000000000000000001575 101.0
PJS3_k127_6290825_2 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 1.519e-205 649.0
PJS3_k127_6290825_3 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 5.721e-198 626.0
PJS3_k127_6290825_4 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 548.0
PJS3_k127_6290825_5 glycosyl transferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 366.0
PJS3_k127_6290825_6 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 348.0
PJS3_k127_6290825_7 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 349.0
PJS3_k127_6290825_8 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000002016 252.0
PJS3_k127_6290825_9 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008314 242.0
PJS3_k127_6462623_0 terminase - - - 2.024e-315 973.0
PJS3_k127_6462623_1 Phage portal protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 524.0
PJS3_k127_6462623_10 Caudovirus prohead serine protease K06904 - - 0.000000000000000000000000000000000000000000000000000000000000003732 226.0
PJS3_k127_6462623_11 Single-strand binding protein family K03111 - - 0.0000000000000000000000000000000000000000000000000000000007034 204.0
PJS3_k127_6462623_12 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000003123 206.0
PJS3_k127_6462623_13 NinG protein - - - 0.00000000000000000000000000000000000000000000000000002273 194.0
PJS3_k127_6462623_14 - - - - 0.00000000000000000000000000000000000000000000000000009066 194.0
PJS3_k127_6462623_15 - - - - 0.0000000000000000000000000000000000000000000000000001605 190.0
PJS3_k127_6462623_16 PFAM ERF family protein - - - 0.00000000000000000000000000000000000000000000000002818 188.0
PJS3_k127_6462623_17 Potassium ABC transporter ATPase - - - 0.00000000000000000000000000000000000001601 164.0
PJS3_k127_6462623_18 - - - - 0.0000000000000000000000000000000001222 139.0
PJS3_k127_6462623_2 Phage capsid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005413 488.0
PJS3_k127_6462623_20 HNH nucleases K07451 - - 0.0000000000000000000000000000000008356 133.0
PJS3_k127_6462623_21 Phage gp6-like head-tail connector protein - - - 0.000000000000000000000008199 108.0
PJS3_k127_6462623_22 ninB family - - - 0.0000000000000000000000273 106.0
PJS3_k127_6462623_23 Protein of unknown function (DUF3168) - - - 0.0000000000000000000007315 99.0
PJS3_k127_6462623_24 Protein of unknown function (DUF1566) - - - 0.0000000000000001196 89.0
PJS3_k127_6462623_26 endonuclease activity - - - 0.00000000000002287 83.0
PJS3_k127_6462623_27 Bacteriophage HK97-gp10, putative tail-component - - - 0.0000000001135 68.0
PJS3_k127_6462623_28 TIGRFAM YD repeat protein - - - 0.000000001003 63.0
PJS3_k127_6462623_29 Major tail protein, TP901-1 family - - - 0.000000009908 63.0
PJS3_k127_6462623_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 382.0
PJS3_k127_6462623_30 Phage-related minor tail protein - - - 0.00000002089 67.0
PJS3_k127_6462623_31 Phage head-tail joining protein - - - 0.0000002191 57.0
PJS3_k127_6462623_34 self proteolysis - - - 0.00004679 56.0
PJS3_k127_6462623_35 sequence-specific DNA binding - - - 0.0004248 49.0
PJS3_k127_6462623_36 phage terminase small subunit - - - 0.0007567 47.0
PJS3_k127_6462623_4 PFAM phosphoadenosine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008728 306.0
PJS3_k127_6462623_5 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 298.0
PJS3_k127_6462623_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001959 271.0
PJS3_k127_6462623_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000006693 237.0
PJS3_k127_6462623_8 YqaJ-like viral recombinase domain K01143 - 3.1.11.3 0.000000000000000000000000000000000000000000000000000000000000000002696 232.0
PJS3_k127_6462623_9 N-4 methylation of cytosine K00571 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000001901 230.0
PJS3_k127_666050_0 Domain of unknown function (DUF4331) - - - 8.47e-283 874.0
PJS3_k127_666050_1 Creatinase/Prolidase N-terminal domain K01271 - 3.4.13.9 2.767e-212 666.0
PJS3_k127_666050_10 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 303.0
PJS3_k127_666050_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000316 276.0
PJS3_k127_666050_12 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002701 250.0
PJS3_k127_666050_13 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000004031 231.0
PJS3_k127_666050_14 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000006078 220.0
PJS3_k127_666050_15 - - - - 0.000000000000000000000000000000000000000000000000000000000008545 210.0
PJS3_k127_666050_16 to Prolyl endopeptidase of cellular organisms UniRef RepID Q5DZR6_VIBF1 K01322 - 3.4.21.26 0.00000000000000000000000000000000000000000000000000003334 190.0
PJS3_k127_666050_17 Integrase catalytic - - - 0.0000000000000000000000000000000000000000000000000002924 187.0
PJS3_k127_666050_18 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000001952 164.0
PJS3_k127_666050_19 Integrase catalytic - - - 0.0000000000000000000000000000000000000001551 152.0
PJS3_k127_666050_2 Aminotransferase class-III K00836 - 2.6.1.76 5.502e-204 642.0
PJS3_k127_666050_20 - - - - 0.00000000000000000000005115 106.0
PJS3_k127_666050_22 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.00000000000000001619 90.0
PJS3_k127_666050_24 - - - - 0.00000000005991 66.0
PJS3_k127_666050_26 OmpA-like transmembrane domain - - - 0.0002491 51.0
PJS3_k127_666050_3 - - - - 2.342e-198 620.0
PJS3_k127_666050_4 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 7.145e-197 623.0
PJS3_k127_666050_5 COG1473 Metal-dependent amidase aminoacylase carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 529.0
PJS3_k127_666050_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 511.0
PJS3_k127_666050_7 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007581 468.0
PJS3_k127_666050_8 Penicillin-insensitive murein endopeptidase K07261 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007779 380.0
PJS3_k127_666050_9 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 343.0
PJS3_k127_691842_1 Polysaccharide deacetylase K11931,K21478 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016787,GO:0016810,GO:0043170,GO:0043412,GO:0071704,GO:0098732 - 6.171e-194 626.0
PJS3_k127_691842_2 Glycosyl transferase family 21 K11936 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0007155,GO:0008150,GO:0008194,GO:0008375,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0022610,GO:0031589,GO:0042710,GO:0043708,GO:0044464,GO:0044764,GO:0051704,GO:0071944,GO:0090605 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 590.0
PJS3_k127_691842_3 PFAM Peptidase C13 - - - 0.000000000000000000000000000000000000000000000000000007618 207.0
PJS3_k127_691842_4 HemY protein K08309,K11935,K20543 - - 0.0000000000000000000000000000000000000000000001255 183.0
PJS3_k127_691842_5 PgaD-like protein K11937 - - 0.000000000000000000000316 104.0
PJS3_k127_691842_6 Domain of unknown function (DUF4034) - - - 0.00002357 57.0
PJS3_k127_715860_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1184.0
PJS3_k127_715860_1 Converts isocitrate to alpha ketoglutarate K00031 - 1.1.1.42 4.289e-260 803.0
PJS3_k127_715860_10 acetyltransferase - - - 0.000000000000000000000000000000000000000000000215 172.0
PJS3_k127_715860_11 Cold-shock' K03704 - - 0.000000000000000000000000000002643 121.0
PJS3_k127_715860_13 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.000000000000000000002525 96.0
PJS3_k127_715860_14 protein acetylation K02348 - - 0.0000000000000003729 85.0
PJS3_k127_715860_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 4.215e-229 717.0
PJS3_k127_715860_3 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006309 596.0
PJS3_k127_715860_4 Transcription factor K18850 - 1.14.11.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007474 427.0
PJS3_k127_715860_5 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008316 294.0
PJS3_k127_715860_6 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000001666 235.0
PJS3_k127_715860_7 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016043,GO:0016829,GO:0016849,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0022607,GO:0034214,GO:0042802,GO:0043170,GO:0043545,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0051259,GO:0061799,GO:0065003,GO:0071704,GO:0071840,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000001649 208.0
PJS3_k127_715860_8 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000000000001455 176.0
PJS3_k127_715860_9 High frequency lysogenization protein HflD homolog K07153 - - 0.0000000000000000000000000000000000000000000000852 175.0
PJS3_k127_725261_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1385.0
PJS3_k127_725261_1 acetolactate synthase K01652 - 2.2.1.6 0.0 1007.0
PJS3_k127_725261_10 Domain of unknown function (DUF4124) - - - 0.0000000000000000004615 96.0
PJS3_k127_725261_11 - - - - 0.00000001451 57.0
PJS3_k127_725261_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 9.178e-199 621.0
PJS3_k127_725261_3 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 467.0
PJS3_k127_725261_4 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 453.0
PJS3_k127_725261_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 380.0
PJS3_k127_725261_6 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 319.0
PJS3_k127_725261_7 acetolactate synthase K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 284.0
PJS3_k127_725261_8 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003452 252.0
PJS3_k127_725261_9 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.000000000000000000000000000000000000000000000000000000000000004407 222.0
PJS3_k127_745907_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 374.0
PJS3_k127_745907_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000001734 238.0
PJS3_k127_745907_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000005208 229.0
PJS3_k127_745907_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.000000000002462 69.0
PJS3_k127_760933_0 Type II and III secretion system protein K02507,K02666 - - 3.946e-244 772.0
PJS3_k127_760933_1 Pilus assembly protein K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 589.0
PJS3_k127_760933_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 495.0
PJS3_k127_760933_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009428 267.0
PJS3_k127_760933_4 Pilus assembly protein PilO K02664 - - 0.000000000000000000000000000000000000000000000000000000000000000000001139 242.0
PJS3_k127_760933_5 Type 4 fimbrial biogenesis protein PilP K02665 - - 0.00000000000000000000000000000000000000000000000000000000001601 210.0
PJS3_k127_760933_6 pilus assembly protein PilN K02663 - - 0.0000000000000000000000000000000000000000000000000000000006269 207.0
PJS3_k127_760933_7 domain, Protein K03112 - - 0.00000000000000000000000000000004442 141.0
PJS3_k127_760933_8 Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate K00265 - 1.4.1.13,1.4.1.14 0.0000002462 52.0
PJS3_k127_788231_0 due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm K01869 - 6.1.1.4 0.0 1344.0
PJS3_k127_788231_1 Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair K03580 - - 0.0 1216.0
PJS3_k127_788231_10 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 8.625e-219 686.0
PJS3_k127_788231_100 Belongs to the UPF0250 family K09158 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000001278 116.0
PJS3_k127_788231_103 Domain of unknown function (DUF4266) - - - 0.00000000000000000000000002484 109.0
PJS3_k127_788231_104 Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide K02439 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016740,GO:0016782,GO:0016783,GO:0044424,GO:0044464 2.8.1.1 0.0000000000000000000000001066 110.0
PJS3_k127_788231_105 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.000000000000000000000000131 115.0
PJS3_k127_788231_106 - - - - 0.0000000000000000000000001656 109.0
PJS3_k127_788231_107 - - - - 0.0000000000000000000000005302 106.0
PJS3_k127_788231_108 - - - - 0.000000000000000000000006884 108.0
PJS3_k127_788231_109 sequence-specific DNA binding - - - 0.00000000000000000000001185 104.0
PJS3_k127_788231_11 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 1.505e-216 680.0
PJS3_k127_788231_110 COG1943 Transposase and inactivated derivatives - - - 0.000000000000000000007134 99.0
PJS3_k127_788231_111 serine threonine protein kinase - - - 0.00000000000000000004299 102.0
PJS3_k127_788231_112 pathogenesis - - - 0.00000000000000000007659 97.0
PJS3_k127_788231_113 - - - - 0.0000000000000000004063 91.0
PJS3_k127_788231_114 DNA excision K07733 - - 0.0000000000000000696 82.0
PJS3_k127_788231_116 Transcriptional regulators - - - 0.000000002994 59.0
PJS3_k127_788231_117 Membrane - - - 0.000000005333 67.0
PJS3_k127_788231_118 Methyltransferase domain - - - 0.000000005438 59.0
PJS3_k127_788231_119 Outer membrane protein W K07275 - - 0.0000001248 61.0
PJS3_k127_788231_12 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 4.543e-212 664.0
PJS3_k127_788231_13 TonB dependent receptor - - - 8.749e-209 671.0
PJS3_k127_788231_14 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 7.285e-205 644.0
PJS3_k127_788231_15 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 2.809e-204 645.0
PJS3_k127_788231_16 COG0501 Zn-dependent protease with chaperone function - - - 1.346e-198 638.0
PJS3_k127_788231_17 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 8.585e-197 633.0
PJS3_k127_788231_18 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 1.169e-195 619.0
PJS3_k127_788231_19 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 1.627e-194 610.0
PJS3_k127_788231_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 - 1.10.3.10,1.9.3.1 0.0 1002.0
PJS3_k127_788231_20 Pfam:HipA_N K07154 - 2.7.11.1 2.879e-194 614.0
PJS3_k127_788231_21 Protein of unknown function (DUF2817) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 554.0
PJS3_k127_788231_22 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004962 550.0
PJS3_k127_788231_23 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007018 543.0
PJS3_k127_788231_24 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 544.0
PJS3_k127_788231_25 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 527.0
PJS3_k127_788231_26 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 514.0
PJS3_k127_788231_27 Phosphate starvation-inducible protein PhoH K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 503.0
PJS3_k127_788231_28 protein required for cytochrome oxidase assembly K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 493.0
PJS3_k127_788231_29 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 486.0
PJS3_k127_788231_3 Molecular chaperone. Has ATPase activity K04079 - - 3.49e-268 839.0
PJS3_k127_788231_30 Protein of unknown function (DUF3570) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 487.0
PJS3_k127_788231_31 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 469.0
PJS3_k127_788231_32 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 458.0
PJS3_k127_788231_33 Heme copper-type cytochrome quinol oxidase, subunit 3 K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009679 446.0
PJS3_k127_788231_34 Predicted metal-dependent hydrolase K07044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008762 443.0
PJS3_k127_788231_35 transporter K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 436.0
PJS3_k127_788231_36 Neuraminidase (sialidase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 440.0
PJS3_k127_788231_37 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 436.0
PJS3_k127_788231_38 protein conserved in bacteria K09919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 424.0
PJS3_k127_788231_39 Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 415.0
PJS3_k127_788231_4 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 9.133e-261 817.0
PJS3_k127_788231_40 DNA polymerase III K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004267 388.0
PJS3_k127_788231_41 Lytic murein transglycosylase B K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 391.0
PJS3_k127_788231_42 Belongs to the short-chain dehydrogenases reductases (SDR) family K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 384.0
PJS3_k127_788231_43 Peptidase dimerisation domain K13049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002995 383.0
PJS3_k127_788231_44 COG3315 O-Methyltransferase involved in polyketide biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 353.0
PJS3_k127_788231_45 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003482 353.0
PJS3_k127_788231_46 dienelactone hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 338.0
PJS3_k127_788231_47 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007503 331.0
PJS3_k127_788231_48 pkhd-type hydroxylase K07336 GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0033554,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0098771 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 329.0
PJS3_k127_788231_49 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 336.0
PJS3_k127_788231_5 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 3.732e-249 774.0
PJS3_k127_788231_50 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 315.0
PJS3_k127_788231_51 Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 316.0
PJS3_k127_788231_52 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 314.0
PJS3_k127_788231_53 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 302.0
PJS3_k127_788231_54 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 303.0
PJS3_k127_788231_55 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 311.0
PJS3_k127_788231_56 Histidine kinase K02484,K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 301.0
PJS3_k127_788231_57 Bacterial protein of unknown function (Gcw_chp) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 291.0
PJS3_k127_788231_58 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004284 280.0
PJS3_k127_788231_59 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005084 279.0
PJS3_k127_788231_6 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 6.475e-241 752.0
PJS3_k127_788231_60 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006412 282.0
PJS3_k127_788231_61 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001055 270.0
PJS3_k127_788231_62 COG0625 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000003355 262.0
PJS3_k127_788231_63 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001449 250.0
PJS3_k127_788231_64 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002102 252.0
PJS3_k127_788231_65 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000000000000000000000000000000000000003692 251.0
PJS3_k127_788231_66 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005972 249.0
PJS3_k127_788231_67 Flavodoxin K00380 - 1.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000002185 258.0
PJS3_k127_788231_68 SURF1-like protein K14998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000016 244.0
PJS3_k127_788231_69 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000009025 235.0
PJS3_k127_788231_7 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 1.731e-239 751.0
PJS3_k127_788231_70 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000231 242.0
PJS3_k127_788231_71 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000000000000000003669 222.0
PJS3_k127_788231_72 Transcriptional regulatory protein, C terminal K02483,K07666 - - 0.00000000000000000000000000000000000000000000000000000000000000573 225.0
PJS3_k127_788231_73 oxidase assembly K02258 - - 0.0000000000000000000000000000000000000000000000000000000000000587 218.0
PJS3_k127_788231_74 protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000001601 213.0
PJS3_k127_788231_75 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000000000003131 205.0
PJS3_k127_788231_76 - - - - 0.000000000000000000000000000000000000000000000000000000003054 205.0
PJS3_k127_788231_77 - - - - 0.000000000000000000000000000000000000000000000000000000008042 207.0
PJS3_k127_788231_78 - - - - 0.0000000000000000000000000000000000000000000000000000001771 202.0
PJS3_k127_788231_79 signal sequence binding - - - 0.00000000000000000000000000000000000000000000000000000263 198.0
PJS3_k127_788231_8 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 4.614e-233 727.0
PJS3_k127_788231_80 Cold-shock' K03704 - - 0.00000000000000000000000000000000000000000000000000006361 195.0
PJS3_k127_788231_81 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000007604 193.0
PJS3_k127_788231_82 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000000000000003633 184.0
PJS3_k127_788231_83 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000000000000000000475 185.0
PJS3_k127_788231_84 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000002646 176.0
PJS3_k127_788231_85 Protein of unknown function (DUF1304) K08987 - - 0.00000000000000000000000000000000000000000000003555 171.0
PJS3_k127_788231_86 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000002353 175.0
PJS3_k127_788231_87 Thioredoxin - - - 0.00000000000000000000000000000000000000000000678 168.0
PJS3_k127_788231_88 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.00000000000000000000000000000000000000000197 162.0
PJS3_k127_788231_89 protein conserved in bacteria - - - 0.000000000000000000000000000000000000001067 153.0
PJS3_k127_788231_9 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 6.059e-229 713.0
PJS3_k127_788231_90 competence protein - - - 0.000000000000000000000000000000000000001505 164.0
PJS3_k127_788231_91 Membrane - - - 0.000000000000000000000000000000000000002961 150.0
PJS3_k127_788231_92 amino acid transport K02030 - - 0.000000000000000000000000000000000000004753 155.0
PJS3_k127_788231_93 proteolysis K19225 - 3.4.21.105 0.0000000000000000000000000000000000003141 158.0
PJS3_k127_788231_94 Predicted membrane protein (DUF2214) K08983 - - 0.00000000000000000000000000000000002157 139.0
PJS3_k127_788231_96 protein conserved in bacteria K09796 - - 0.0000000000000000000000000000019 127.0
PJS3_k127_788231_97 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03972 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005623,GO:0016740,GO:0016782,GO:0016783,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.000000000000000000000000000003555 124.0
PJS3_k127_788231_98 TonB C terminal K03832 - - 0.00000000000000000000000000007921 126.0
PJS3_k127_84718_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1451.0
PJS3_k127_84718_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1183.0
PJS3_k127_84718_10 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 1.258e-224 710.0
PJS3_k127_84718_11 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 2.736e-208 656.0
PJS3_k127_84718_12 Lipoprotein releasing system, transmembrane protein K09808 - - 1.862e-203 639.0
PJS3_k127_84718_13 Transposase - - - 2.082e-195 620.0
PJS3_k127_84718_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008765 546.0
PJS3_k127_84718_15 flavoproteins K07007 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 538.0
PJS3_k127_84718_16 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.173,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 544.0
PJS3_k127_84718_17 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009429 526.0
PJS3_k127_84718_18 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008196 499.0
PJS3_k127_84718_19 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 497.0
PJS3_k127_84718_2 of the RND superfamily K07003 - - 0.0 1137.0
PJS3_k127_84718_20 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 493.0
PJS3_k127_84718_21 mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 490.0
PJS3_k127_84718_22 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000561 484.0
PJS3_k127_84718_23 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 474.0
PJS3_k127_84718_24 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 459.0
PJS3_k127_84718_25 peptidase K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 434.0
PJS3_k127_84718_26 Acyl-CoA thioesterase K10805 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006596 423.0
PJS3_k127_84718_27 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 430.0
PJS3_k127_84718_28 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004766 410.0
PJS3_k127_84718_29 Belongs to the agmatine deiminase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 410.0
PJS3_k127_84718_3 aminopeptidase N K01256 - 3.4.11.2 0.0 1029.0
PJS3_k127_84718_30 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 396.0
PJS3_k127_84718_31 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005874 382.0
PJS3_k127_84718_32 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 377.0
PJS3_k127_84718_33 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 370.0
PJS3_k127_84718_34 COG1073 Hydrolases of the alpha beta superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 398.0
PJS3_k127_84718_35 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 367.0
PJS3_k127_84718_36 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 353.0
PJS3_k127_84718_37 protein related to plant photosystem II stability - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 361.0
PJS3_k127_84718_38 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 361.0
PJS3_k127_84718_39 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 355.0
PJS3_k127_84718_4 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 5.358e-290 924.0
PJS3_k127_84718_40 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005805 340.0
PJS3_k127_84718_41 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006916 362.0
PJS3_k127_84718_42 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K19696 - 2.4.2.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 333.0
PJS3_k127_84718_43 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 325.0
PJS3_k127_84718_44 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004917 321.0
PJS3_k127_84718_45 COG0084 Mg-dependent DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006045 315.0
PJS3_k127_84718_46 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009518 288.0
PJS3_k127_84718_47 MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 286.0
PJS3_k127_84718_48 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000669 284.0
PJS3_k127_84718_49 Uracil-DNA glycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007053 281.0
PJS3_k127_84718_5 Protein of unknown function (DUF1302) - - - 1.034e-275 862.0
PJS3_k127_84718_50 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000004336 262.0
PJS3_k127_84718_51 hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000001789 263.0
PJS3_k127_84718_52 Maf-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000125 252.0
PJS3_k127_84718_53 protein conserved in bacteria K09928 - - 0.0000000000000000000000000000000000000000000000000000000000000000002184 233.0
PJS3_k127_84718_54 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000538 233.0
PJS3_k127_84718_55 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.00000000000000000000000000000000000000000000000000000000000001004 222.0
PJS3_k127_84718_56 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000002894 219.0
PJS3_k127_84718_57 Universal stress protein K06149 - - 0.00000000000000000000000000000000000000000000000000000004885 199.0
PJS3_k127_84718_58 metal-binding, possibly nucleic acid-binding protein K07040 - - 0.000000000000000000000000000000000000000000000000001396 187.0
PJS3_k127_84718_59 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000001382 184.0
PJS3_k127_84718_6 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 1.061e-269 834.0
PJS3_k127_84718_60 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000000000000000000000000001383 156.0
PJS3_k127_84718_61 Peptidoglycan-binding protein, CsiV - - - 0.0000000000000000000000000000000000001097 153.0
PJS3_k127_84718_62 protein conserved in bacteria - - - 0.00000000000000000000000001488 115.0
PJS3_k127_84718_63 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000002345 108.0
PJS3_k127_84718_64 - - - - 0.000000000000000000000000404 117.0
PJS3_k127_84718_65 protein conserved in bacteria K09916 - - 0.0000000000000000000000009477 107.0
PJS3_k127_84718_66 During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes) K03812 - - 0.00000000000000000000001444 101.0
PJS3_k127_84718_67 protein conserved in bacteria K05952 - - 0.00000000000000000001301 96.0
PJS3_k127_84718_68 - - - - 0.00000000000002003 84.0
PJS3_k127_84718_69 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000003796 75.0
PJS3_k127_84718_7 Protein of unknown function (DUF1329) - - - 5.957e-241 751.0
PJS3_k127_84718_8 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 1.367e-233 728.0
PJS3_k127_84718_9 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 3.51e-229 713.0
PJS3_k127_856729_0 MMPL family K07003 - - 2.986e-216 696.0
PJS3_k127_856729_1 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004415 531.0
PJS3_k127_856729_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 497.0
PJS3_k127_856729_3 LysR substrate binding domain K03566 - - 0.000000000000000000000000000000000000000000000000000000000000000006225 235.0
PJS3_k127_856729_4 - - - - 0.0000000000000000000000000000004334 130.0
PJS3_k127_856729_5 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000007722 111.0
PJS3_k127_856729_7 transcriptional regulators - - - 0.0000000000000000007453 89.0
PJS3_k127_856729_8 Membrane-bound lysozyme-inhibitor of c-type lysozyme - - - 0.0004768 49.0