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Overview

ID MAG03112
Name PJS3_bin.6
Sample SMP0072
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Alphaproteobacteria
Order Kiloniellales
Family CECT-8803
Genus JARRJC01
Species JARRJC01 sp037379885
Assembly information
Completeness (%) 90.74
Contamination (%) 2.61
GC content (%) 66.0
N50 (bp) 16,571
Genome size (bp) 2,638,063

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2563

Gene name Description KEGG GOs EC E-value Score Sequence
PJS3_k127_101809_0 Belongs to the TPP enzyme family - - - 2.853e-234 736.0
PJS3_k127_101809_1 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 405.0
PJS3_k127_101809_2 Protein of unknown function (DUF3179) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 389.0
PJS3_k127_101809_3 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006654 289.0
PJS3_k127_101809_4 Tripartite tricarboxylate transporter TctA family - - - 0.000000000000000000000000002836 112.0
PJS3_k127_101809_5 Alpha/beta hydrolase family - - - 0.0000000000000000000003861 105.0
PJS3_k127_1041331_0 formate-tetrahydrofolate ligase activity K01938 - 6.3.4.3 3.032e-251 780.0
PJS3_k127_106316_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 565.0
PJS3_k127_106316_1 MatE K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 317.0
PJS3_k127_108241_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 4.6e-312 970.0
PJS3_k127_108241_1 COG1593 TRAP-type C4-dicarboxylate transport system large permease component K11690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009003 589.0
PJS3_k127_108241_10 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000161 263.0
PJS3_k127_108241_11 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000000000001026 205.0
PJS3_k127_108241_12 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.0000000000000000000000000000000000000000000000001079 184.0
PJS3_k127_108241_13 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000004019 178.0
PJS3_k127_108241_14 transport system, small permease component - - - 0.000000000000000000000000000000000000001143 154.0
PJS3_k127_108241_15 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000001148 157.0
PJS3_k127_108241_16 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000002133 84.0
PJS3_k127_108241_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 522.0
PJS3_k127_108241_3 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005442 514.0
PJS3_k127_108241_4 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006613 470.0
PJS3_k127_108241_5 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 401.0
PJS3_k127_108241_6 Protein conserved in bacteria K09769 GO:0003674,GO:0003824,GO:0004112,GO:0004113,GO:0008081,GO:0016787,GO:0016788,GO:0042578 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 398.0
PJS3_k127_108241_7 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 344.0
PJS3_k127_108241_8 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009703 338.0
PJS3_k127_108241_9 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005633 305.0
PJS3_k127_1113830_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 355.0
PJS3_k127_1113830_1 VirC1 protein K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 320.0
PJS3_k127_1113830_2 COQ9 K18587 - - 0.00000000000000000000000000000000000000000000000000000000000004056 222.0
PJS3_k127_1113830_3 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000000000000007288 116.0
PJS3_k127_1113830_4 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000001452 110.0
PJS3_k127_1120967_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 1.163e-259 808.0
PJS3_k127_115983_0 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 4.51e-260 835.0
PJS3_k127_115983_1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00992 - 2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000005962 214.0
PJS3_k127_115983_2 Belongs to the helicase family. UvrD subfamily K16898 - 3.6.4.12 0.00000000000000000000000000000006418 137.0
PJS3_k127_1231615_0 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 344.0
PJS3_k127_1231615_1 COG1247 Sortase and related acyltransferases K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000000000000000002158 220.0
PJS3_k127_1231615_2 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000000000000000008343 196.0
PJS3_k127_1231615_3 ankyrin repeat - - - 0.00001608 50.0
PJS3_k127_1245248_0 Arginase family K01480 - 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004349 514.0
PJS3_k127_1245248_1 rhodanese-related sulfurtransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008687 506.0
PJS3_k127_1245248_2 ChrR Cupin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 319.0
PJS3_k127_1245248_3 GAF domain K08968 - 1.8.4.14 0.00000000000000000000000000000000000000000000000000000000004375 210.0
PJS3_k127_1245248_4 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000001316 169.0
PJS3_k127_1245248_5 - - - - 0.000000000000000000000000000000000004131 144.0
PJS3_k127_1245248_6 of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000177 117.0
PJS3_k127_1245248_7 Domain of unknown function (DUF4915) - - - 0.00000000000000002528 89.0
PJS3_k127_1245248_8 Autotransporter beta-domain - - - 0.00001763 53.0
PJS3_k127_1245248_9 Iron-regulated protein - - - 0.0002559 44.0
PJS3_k127_1271348_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 321.0
PJS3_k127_1271348_1 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001251 246.0
PJS3_k127_129461_0 COG4770 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 1.149e-241 767.0
PJS3_k127_129461_1 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008955 458.0
PJS3_k127_129461_2 COG0119 Isopropylmalate homocitrate citramalate synthases K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269 448.0
PJS3_k127_129461_3 Enoyl-CoA hydratase K13766 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009569 320.0
PJS3_k127_129461_4 Ion transport 2 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000146 229.0
PJS3_k127_129461_5 Protein of unknown function (DUF1489) - - - 0.000000000000000000000000000000000001265 155.0
PJS3_k127_129546_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1310.0
PJS3_k127_129546_1 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 413.0
PJS3_k127_129546_2 MOSC N-terminal beta barrel domain K07140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001628 252.0
PJS3_k127_129546_3 Destroys radicals which are normally produced within the cells and which are toxic to biological systems - - - 0.00000000000000000000000000000000000000000000001935 177.0
PJS3_k127_1304179_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 1.67e-260 826.0
PJS3_k127_1304179_1 Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 485.0
PJS3_k127_1304179_2 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000046 276.0
PJS3_k127_1304179_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009380,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.000000000000000000000000000002663 121.0
PJS3_k127_132210_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 1.008e-220 694.0
PJS3_k127_132210_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 462.0
PJS3_k127_132210_2 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 340.0
PJS3_k127_132210_3 YeeE YedE family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 305.0
PJS3_k127_132210_4 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000007865 154.0
PJS3_k127_132210_5 Dehydrogenase reductase - - - 0.000000000000000000000000000000000005388 138.0
PJS3_k127_132210_6 dehydrogenase - - - 0.00000000000000000000000000001617 121.0
PJS3_k127_132210_7 - - - - 0.0000000001178 68.0
PJS3_k127_1333346_0 Creatinase/Prolidase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 524.0
PJS3_k127_1333346_1 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 307.0
PJS3_k127_1333346_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006964 283.0
PJS3_k127_1333346_3 - - - - 0.00000000000000003171 95.0
PJS3_k127_1371372_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 1.545e-206 653.0
PJS3_k127_1371372_1 6-phosphogluconolactonase K01057 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000002255 225.0
PJS3_k127_1371372_2 Glucokinase K00845 - 2.7.1.2 0.000000000000000007943 86.0
PJS3_k127_1375405_0 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296,K18299 - - 0.0 1147.0
PJS3_k127_1375405_1 Belongs to the thiolase family K00626,K00632,K07823 - 2.3.1.16,2.3.1.174,2.3.1.9 9.557e-195 613.0
PJS3_k127_1375405_2 Glucose / Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000827 470.0
PJS3_k127_1375405_3 Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 441.0
PJS3_k127_1375405_4 Receptor family ligand binding region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004816 440.0
PJS3_k127_1375405_5 Coenzyme A transferase K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 408.0
PJS3_k127_1375405_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005779 311.0
PJS3_k127_1375405_7 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001053 271.0
PJS3_k127_1375405_8 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001688 270.0
PJS3_k127_1375405_9 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000001763 127.0
PJS3_k127_1383021_0 COG0687 Spermidine putrescine-binding periplasmic protein K11069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 522.0
PJS3_k127_1383021_1 COG1176 ABC-type spermidine putrescine transport system, permease component I K11071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006674 407.0
PJS3_k127_1383021_2 COG1177 ABC-type spermidine putrescine transport system, permease component II K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 345.0
PJS3_k127_1383021_3 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system - - - 0.0000000000000000000009582 95.0
PJS3_k127_1383021_4 BetI-type transcriptional repressor, C-terminal - - - 0.00000000000000001546 84.0
PJS3_k127_1388067_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 9.077e-299 939.0
PJS3_k127_1388067_1 Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 580.0
PJS3_k127_1388067_2 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000618 258.0
PJS3_k127_1388067_3 EamA-like transporter family - - - 0.000000000000000000006195 97.0
PJS3_k127_1398858_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.5e-323 1004.0
PJS3_k127_1398858_1 alcohol dehydrogenase K00001,K00043 - 1.1.1.1,1.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004061 518.0
PJS3_k127_1398858_10 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 291.0
PJS3_k127_1398858_11 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000002955 238.0
PJS3_k127_1398858_12 MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000000000000000000001698 206.0
PJS3_k127_1398858_13 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000000000000000000000000003232 199.0
PJS3_k127_1398858_14 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000000000000000000000000000000000000000000005861 199.0
PJS3_k127_1398858_15 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000000000000000000000000000000000000000002033 192.0
PJS3_k127_1398858_16 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000000218 182.0
PJS3_k127_1398858_17 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000000000003324 127.0
PJS3_k127_1398858_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 426.0
PJS3_k127_1398858_3 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00263 - 1.4.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 420.0
PJS3_k127_1398858_4 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 402.0
PJS3_k127_1398858_5 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009003 340.0
PJS3_k127_1398858_6 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 344.0
PJS3_k127_1398858_7 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009879 356.0
PJS3_k127_1398858_8 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008091 302.0
PJS3_k127_1398858_9 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 306.0
PJS3_k127_140355_0 NADH:flavin oxidoreductase / NADH oxidase family K00317 - 1.5.8.1,1.5.8.2 0.0 1055.0
PJS3_k127_140355_1 Isocitrate/isopropylmalate dehydrogenase K07246 - 1.1.1.83,1.1.1.93,4.1.1.73 6.262e-199 623.0
PJS3_k127_140355_11 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781,K20023 - 4.2.1.156,4.2.1.42,5.1.2.2 0.000000000000000000000000000000000000000000006349 165.0
PJS3_k127_140355_12 Cupin domain - - - 0.000000000000000000000000000000000000000005841 165.0
PJS3_k127_140355_13 Protein of unknown function (DUF861) - - - 0.00000000000000000000000000000000000001599 149.0
PJS3_k127_140355_14 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000004567 150.0
PJS3_k127_140355_15 - - - - 0.000000000000000000000000000008539 124.0
PJS3_k127_140355_16 protein conserved in bacteria - - - 0.000000000000000000000005649 111.0
PJS3_k127_140355_17 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000004118 99.0
PJS3_k127_140355_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 514.0
PJS3_k127_140355_3 Bacterial extracellular solute-binding protein K11069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005681 501.0
PJS3_k127_140355_4 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 492.0
PJS3_k127_140355_5 Binding-protein-dependent transport system inner membrane component K11071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 446.0
PJS3_k127_140355_6 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 424.0
PJS3_k127_140355_7 Binding-protein-dependent transport system inner membrane component K11070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007361 380.0
PJS3_k127_140355_8 Proteasome-type protease K07395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 341.0
PJS3_k127_140355_9 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 342.0
PJS3_k127_1406113_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007543 604.0
PJS3_k127_1406113_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 523.0
PJS3_k127_1406113_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 351.0
PJS3_k127_1406113_3 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K08318 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006790,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009636,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019748,GO:0042221,GO:0042802,GO:0044237,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0047577,GO:0050896,GO:0055114,GO:0061596,GO:0071704,GO:0098754,GO:1901135,GO:1901136,GO:1901575,GO:1902776,GO:1902777 1.1.1.373,1.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 289.0
PJS3_k127_1406113_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004784 247.0
PJS3_k127_1406113_5 Phage integrase family - - - 0.00000000000000000000000000000000000000000000000000000000003222 226.0
PJS3_k127_1406113_6 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.000539 43.0
PJS3_k127_1417981_0 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 295.0
PJS3_k127_1417981_1 Phospholipase/Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000000000000000000000000000002704 233.0
PJS3_k127_1417981_2 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000002782 197.0
PJS3_k127_1417981_3 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000008689 80.0
PJS3_k127_142109_0 Amidohydrolase family K01464 - 3.5.2.2 4.041e-248 773.0
PJS3_k127_142109_1 Carbon-nitrogen hydrolase K01431 - 3.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 463.0
PJS3_k127_142109_2 synthesis repressor, PhaR - - - 0.00000002801 60.0
PJS3_k127_1423979_0 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 9.017e-262 815.0
PJS3_k127_1423979_1 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 GO:0001539,GO:0002048,GO:0002049,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005575,GO:0005623,GO:0005886,GO:0006518,GO:0006629,GO:0006643,GO:0006664,GO:0006807,GO:0006810,GO:0006928,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009237,GO:0009247,GO:0009636,GO:0009987,GO:0015886,GO:0016020,GO:0016209,GO:0016491,GO:0016684,GO:0019184,GO:0019290,GO:0019748,GO:0034641,GO:0040011,GO:0042221,GO:0043043,GO:0043107,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044464,GO:0044550,GO:0046467,GO:0048870,GO:0050896,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051674,GO:0051716,GO:0055114,GO:0070887,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0071973,GO:0071975,GO:0071977,GO:0071978,GO:0097237,GO:0097588,GO:0098754,GO:0098869,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901678,GO:1903509,GO:1990748 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 345.0
PJS3_k127_1423979_2 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003059 279.0
PJS3_k127_1423979_3 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741,K03892 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000000003945 235.0
PJS3_k127_1423979_4 Transglutaminase-like domain - - - 0.00005615 53.0
PJS3_k127_1446085_0 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 464.0
PJS3_k127_1446085_1 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003983 316.0
PJS3_k127_1446085_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.0000000000000000000000000000000000000000000004737 175.0
PJS3_k127_1446085_3 isoprenoid biosynthetic process K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000007038 135.0
PJS3_k127_1446085_4 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00004708 49.0
PJS3_k127_1461067_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 4.4e-323 1003.0
PJS3_k127_1461067_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 562.0
PJS3_k127_1461067_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000000002191 190.0
PJS3_k127_1461067_4 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000007902 87.0
PJS3_k127_1472607_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1001.0
PJS3_k127_1472607_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002288 256.0
PJS3_k127_1478157_0 Bacterial extracellular solute-binding protein K17321 - - 0.0 1030.0
PJS3_k127_1478157_1 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 1.624e-224 704.0
PJS3_k127_1478157_10 BetI-type transcriptional repressor, C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000001433 236.0
PJS3_k127_1478157_11 small integral membrane protein - - - 0.00000000000000000000000000000000000003307 145.0
PJS3_k127_1478157_12 Binding-protein-dependent transport system inner membrane component K11071 - - 0.0000001815 53.0
PJS3_k127_1478157_2 Aminotransferase class-III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 593.0
PJS3_k127_1478157_3 Belongs to the ABC transporter superfamily K17325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 501.0
PJS3_k127_1478157_4 COG1175 ABC-type sugar transport systems permease components K17322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 484.0
PJS3_k127_1478157_5 Binding-protein-dependent transport system inner membrane component K17323 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 475.0
PJS3_k127_1478157_6 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072,K11076 - 3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 443.0
PJS3_k127_1478157_7 ABC transporter K17324 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 439.0
PJS3_k127_1478157_8 DeoR C terminal sensor domain K02444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 342.0
PJS3_k127_1478157_9 COG1177 ABC-type spermidine putrescine transport system, permease component II K11070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 335.0
PJS3_k127_1494589_0 PFAM transposase IS4 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 495.0
PJS3_k127_152081_0 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 4.726e-231 720.0
PJS3_k127_152081_1 Cytochrome c554 and c-prime - - - 1.364e-220 708.0
PJS3_k127_152081_2 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 583.0
PJS3_k127_152081_3 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000168 287.0
PJS3_k127_152081_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006512 257.0
PJS3_k127_152081_5 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000006507 227.0
PJS3_k127_1544551_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.0 1021.0
PJS3_k127_1544551_1 Aerotolerance regulator N-terminal - - - 2.767e-281 895.0
PJS3_k127_1544551_10 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 486.0
PJS3_k127_1544551_11 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 491.0
PJS3_k127_1544551_12 ABC-type spermidine putrescine transport system, permease component I K11071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007593 474.0
PJS3_k127_1544551_13 DNA polymerase III, epsilon subunit K02342,K07182 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 480.0
PJS3_k127_1544551_14 COG1194 A G-specific DNA glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005393 453.0
PJS3_k127_1544551_15 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008387 443.0
PJS3_k127_1544551_16 COG3264 Small-conductance mechanosensitive channel K05802 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 462.0
PJS3_k127_1544551_17 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01028,K01039 - 2.8.3.12,2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 426.0
PJS3_k127_1544551_18 ABC-type spermidine putrescine transport system, permease component II K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 419.0
PJS3_k127_1544551_19 COG0475 Kef-type K transport systems, membrane components K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 416.0
PJS3_k127_1544551_2 membrane - - - 1.407e-233 743.0
PJS3_k127_1544551_20 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01040 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009329 406.0
PJS3_k127_1544551_21 short-chain dehydrogenase reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 381.0
PJS3_k127_1544551_22 poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 387.0
PJS3_k127_1544551_23 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 370.0
PJS3_k127_1544551_24 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 349.0
PJS3_k127_1544551_25 COG2771 DNA-binding HTH domain-containing proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 345.0
PJS3_k127_1544551_26 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 346.0
PJS3_k127_1544551_27 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 334.0
PJS3_k127_1544551_28 Pirin K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009645 321.0
PJS3_k127_1544551_29 Belongs to the WrbA family K03809 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 318.0
PJS3_k127_1544551_3 glutamate--cysteine ligase K01919 - 6.3.2.2 1.582e-220 691.0
PJS3_k127_1544551_30 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 320.0
PJS3_k127_1544551_31 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 320.0
PJS3_k127_1544551_32 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000158 288.0
PJS3_k127_1544551_33 Ribosomal protein L11 methyltransferase (PrmA) - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010565,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031974,GO:0031998,GO:0031999,GO:0032259,GO:0036211,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043467,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045833,GO:0045922,GO:0046320,GO:0046322,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050994,GO:0050995,GO:0051341,GO:0051354,GO:0062012,GO:0062014,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1904732,GO:1904733,GO:1904735,GO:1904736 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008755 275.0
PJS3_k127_1544551_34 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007078 249.0
PJS3_k127_1544551_35 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.000000000000000000000000000000000000000000000000000000000000000000009403 243.0
PJS3_k127_1544551_36 Bacterial protein of unknown function (DUF924) - - - 0.000000000000000000000000000000000000000000000000000000000000007891 220.0
PJS3_k127_1544551_37 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000004517 222.0
PJS3_k127_1544551_38 Cupin superfamily protein - - - 0.0000000000000000000000000000000000000000000000000000000000008578 226.0
PJS3_k127_1544551_39 - - - - 0.000000000000000000000000000000000000000000000000000000000001948 216.0
PJS3_k127_1544551_4 Spermidine putrescine-binding periplasmic protein K11069 - - 9.097e-216 678.0
PJS3_k127_1544551_40 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000000000000000000000000001676 218.0
PJS3_k127_1544551_41 Peroxiredoxin - - - 0.000000000000000000000000000000000000000000000000000002296 201.0
PJS3_k127_1544551_42 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000005823 198.0
PJS3_k127_1544551_43 - - - - 0.00000000000000000000000000000000000000000000000000002793 190.0
PJS3_k127_1544551_44 Protein of unknown function (DUF1285) K09986 - - 0.00000000000000000000000000000000000000000000000000009231 196.0
PJS3_k127_1544551_45 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.0000000000000000000000000000000000000000000000000003719 201.0
PJS3_k127_1544551_46 COG0073 EMAP domain K06878 GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000006491 192.0
PJS3_k127_1544551_47 Protein of unknown function (DUF1007) - - - 0.00000000000000000000000000000000000000002349 160.0
PJS3_k127_1544551_48 Pyridoxamine 5'-phosphate oxidase K00275 - 1.4.3.5 0.00000000000000000000000000000000000000002364 163.0
PJS3_k127_1544551_49 Protein of unknown function (DUF721) - - - 0.0000000000000000000000000000004314 128.0
PJS3_k127_1544551_5 Thiol disulfide interchange protein K04084,K08344 - 1.8.1.8 9.776e-210 674.0
PJS3_k127_1544551_50 Domain of unknown function (DUF4212) - - - 0.00000000000000000000000006021 111.0
PJS3_k127_1544551_51 synthase K16167 - - 0.000000000000003766 78.0
PJS3_k127_1544551_52 Integrase - - - 0.000001149 50.0
PJS3_k127_1544551_53 Phage integrase family - - - 0.000005354 55.0
PJS3_k127_1544551_55 PFAM Flp Fap pilin component K02651 - - 0.0009594 44.0
PJS3_k127_1544551_6 Rhodanese Homology Domain - - - 1.677e-198 633.0
PJS3_k127_1544551_7 Belongs to the N(4) N(6)-methyltransferase family K13581 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 550.0
PJS3_k127_1544551_8 Glutathione S-transferase, C-terminal domain K07393 - 1.8.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 511.0
PJS3_k127_1544551_9 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 499.0
PJS3_k127_1550887_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1023.0
PJS3_k127_1551121_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003883 425.0
PJS3_k127_1551121_1 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000000000000000000000000006706 210.0
PJS3_k127_1551121_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000002958 131.0
PJS3_k127_1579118_0 Bacterial dnaA protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008892 418.0
PJS3_k127_1579118_1 Integrase core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 321.0
PJS3_k127_1579118_2 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K01144,K03581 - 3.1.11.5 0.00000000000000000000000000000000000000007209 151.0
PJS3_k127_1597178_0 Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 403.0
PJS3_k127_1597178_1 Formate/nitrite transporter K21990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 294.0
PJS3_k127_1597178_2 - - - - 0.000006704 49.0
PJS3_k127_1628656_0 Tripartite tricarboxylate transporter TctA family - - - 1.719e-291 908.0
PJS3_k127_1628656_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 587.0
PJS3_k127_1628656_2 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.000000000000000000000000000003459 121.0
PJS3_k127_1628656_3 oxidoreductase activity - - - 0.0000005513 51.0
PJS3_k127_1731771_0 Tripartite tricarboxylate transporter TctA family K07793 - - 3.48e-233 730.0
PJS3_k127_1731771_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 570.0
PJS3_k127_1731771_10 protein conserved in bacteria K09987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002486 283.0
PJS3_k127_1731771_11 endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000001382 238.0
PJS3_k127_1731771_12 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000001837 238.0
PJS3_k127_1731771_13 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000002571 233.0
PJS3_k127_1731771_14 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000864 218.0
PJS3_k127_1731771_15 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000005328 211.0
PJS3_k127_1731771_16 Lipocalin / cytosolic fatty-acid binding protein family K03098 - - 0.000000000000000000000000000000000000001892 153.0
PJS3_k127_1731771_17 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000001469 154.0
PJS3_k127_1731771_18 ornithine cyclodeaminase activity K01750,K16182 - 4.3.1.12 0.0000000000000000000000000000000000008117 153.0
PJS3_k127_1731771_19 MmgE/PrpD family - - - 0.000000000000000000000000000000000002154 148.0
PJS3_k127_1731771_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 507.0
PJS3_k127_1731771_20 - - - - 0.0000000000000000000000006699 106.0
PJS3_k127_1731771_21 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000005907 106.0
PJS3_k127_1731771_22 Protein of unknown function (DUF1192) - - - 0.00000000000000006382 83.0
PJS3_k127_1731771_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 475.0
PJS3_k127_1731771_4 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 407.0
PJS3_k127_1731771_5 PFAM Mandelate racemase muconate lactonizing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006814 407.0
PJS3_k127_1731771_6 aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 372.0
PJS3_k127_1731771_7 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases K00019 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 357.0
PJS3_k127_1731771_8 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 351.0
PJS3_k127_1731771_9 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 306.0
PJS3_k127_17624_0 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000543 207.0
PJS3_k127_17624_1 Histidine kinase-like ATPases K14980 - 2.7.13.3 0.00000000000000000000000000000000000000000003952 166.0
PJS3_k127_179672_0 Transposase, Mutator family K07493 - - 1.365e-223 698.0
PJS3_k127_179672_1 Belongs to the Dps family K04047 - - 0.00000001634 57.0
PJS3_k127_1832860_0 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 0.0 1069.0
PJS3_k127_1832860_1 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 1.406e-296 921.0
PJS3_k127_1832860_10 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000006704 269.0
PJS3_k127_1832860_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000000000000000004668 176.0
PJS3_k127_1832860_2 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 3.256e-258 803.0
PJS3_k127_1832860_3 hydrolase of the metallo-beta-lactamase superfamily K12574 - - 8.366e-211 672.0
PJS3_k127_1832860_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051 599.0
PJS3_k127_1832860_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008645 579.0
PJS3_k127_1832860_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 555.0
PJS3_k127_1832860_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 316.0
PJS3_k127_1832860_8 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000839 322.0
PJS3_k127_1832860_9 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008151 305.0
PJS3_k127_1845071_0 Sodium Bile acid symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001306 264.0
PJS3_k127_1845071_1 (Lipo)protein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000002939 226.0
PJS3_k127_1845071_2 Acetyltransferase (GNAT) domain K00657 - 2.3.1.57 0.00000000000000000000000000000000000000000000000001893 184.0
PJS3_k127_1845071_3 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000000000000000000008986 168.0
PJS3_k127_1845071_4 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000001128 158.0
PJS3_k127_1845071_5 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.0000000000000000000000000000000001979 141.0
PJS3_k127_1845071_6 COG0488 ATPase components of ABC transporters with duplicated ATPase domains - - - 0.0000000000000000000000000000000007703 130.0
PJS3_k127_1946523_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.0 1240.0
PJS3_k127_1946523_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 373.0
PJS3_k127_1946523_2 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 379.0
PJS3_k127_1946523_3 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 321.0
PJS3_k127_1946523_4 hydrolase (HAD superfamily) K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003033 282.0
PJS3_k127_1946523_5 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000001003 232.0
PJS3_k127_1946523_6 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.000000000000000000000000000000000000000000000000003505 185.0
PJS3_k127_1946523_7 SOS response K14160 - - 0.00000000000000000000000000000003061 136.0
PJS3_k127_1946523_8 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000001776 125.0
PJS3_k127_1946523_9 Protein of unknown function - - - 0.0000000000000000000000007017 106.0
PJS3_k127_1979033_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 5.871e-266 840.0
PJS3_k127_1979033_1 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 1.069e-236 736.0
PJS3_k127_1979033_10 - - - - 0.000000000000000000000000000000000001405 143.0
PJS3_k127_1979033_11 Outer membrane protein (OmpH-like) - - - 0.0000000000000000001598 97.0
PJS3_k127_1979033_12 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000611 81.0
PJS3_k127_1979033_13 Competence protein K02238 - - 0.00000000006143 70.0
PJS3_k127_1979033_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 7.068e-206 657.0
PJS3_k127_1979033_3 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 493.0
PJS3_k127_1979033_4 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 474.0
PJS3_k127_1979033_5 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 402.0
PJS3_k127_1979033_6 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 362.0
PJS3_k127_1979033_7 Udp N-acetylglucosamine O-acyltransferase; Domain 2 K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 325.0
PJS3_k127_1979033_8 Protein conserved in bacteria K09949 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 316.0
PJS3_k127_1979033_9 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000008286 222.0
PJS3_k127_1983637_0 CoA binding domain - - - 8.831e-230 732.0
PJS3_k127_1983637_1 acyl-CoA dehydrogenase K00249 - 1.3.8.7 3.1e-210 660.0
PJS3_k127_1983637_10 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759 GO:0003674,GO:0003824,GO:0004462,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016846,GO:0034641,GO:0043603,GO:0044237,GO:0051186,GO:0071704,GO:1901564 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000003524 254.0
PJS3_k127_1983637_11 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000004857 254.0
PJS3_k127_1983637_12 ammonia monooxygenase K07120 - - 0.00000000000000000000000000000000000000000000000000000000000000003685 236.0
PJS3_k127_1983637_13 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.00000000000000000000000000000000000000000000000000000000000001695 218.0
PJS3_k127_1983637_14 META domain K03668 - - 0.00000000000008247 77.0
PJS3_k127_1983637_15 - - - - 0.00000000000384 72.0
PJS3_k127_1983637_16 - - - - 0.00000000006389 70.0
PJS3_k127_1983637_17 Domain of unknown function (DUF4410) - - - 0.00004851 50.0
PJS3_k127_1983637_2 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 563.0
PJS3_k127_1983637_3 Belongs to the proline racemase family K01777 - 5.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005455 508.0
PJS3_k127_1983637_4 beta-keto acid cleavage enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002801 471.0
PJS3_k127_1983637_5 Catalyzes the NAD( )-dependent oxidation of L-carnitine to 3-dehydrocarnitine K17735 - 1.1.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 441.0
PJS3_k127_1983637_6 Belongs to the enoyl-CoA hydratase isomerase family K08299 GO:0003674,GO:0003824,GO:0004300,GO:0006082,GO:0006575,GO:0006577,GO:0006579,GO:0006629,GO:0006631,GO:0006635,GO:0006807,GO:0008150,GO:0008152,GO:0008809,GO:0009056,GO:0009062,GO:0009437,GO:0009987,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0034641,GO:0042219,GO:0042413,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044270,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:0097164,GO:1901564,GO:1901565,GO:1901575 4.2.1.149 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 370.0
PJS3_k127_1983637_7 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 368.0
PJS3_k127_1983637_8 COG5285 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009174 278.0
PJS3_k127_1983637_9 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002574 273.0
PJS3_k127_198865_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 587.0
PJS3_k127_198865_1 Phosphate transport system permease K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 316.0
PJS3_k127_19929_0 COG0044 Dihydroorotase and related cyclic amidohydrolases K01465 - 3.5.2.3 2.126e-201 636.0
PJS3_k127_19929_1 Thiolase, C-terminal domain K00626 - 2.3.1.9 6.972e-200 627.0
PJS3_k127_19929_2 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 384.0
PJS3_k127_19929_3 Belongs to the GcvT family K06980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 290.0
PJS3_k127_19929_4 COG4235 Cytochrome c biogenesis factor K02200 - - 0.000000000000000000000000000000000000000000000000000000003524 218.0
PJS3_k127_19929_5 - - - - 0.0000000000000000000000000000000000000001801 152.0
PJS3_k127_19929_6 Cupin domain - - - 0.00000000000000000000000000000006327 129.0
PJS3_k127_19929_7 Transcriptional - - - 0.000000000000003539 82.0
PJS3_k127_2001232_0 Protein conserved in bacteria K07793 - - 1.022e-293 905.0
PJS3_k127_2001232_1 Protein conserved in bacteria K07793 - - 7.912e-266 825.0
PJS3_k127_2001232_10 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 559.0
PJS3_k127_2001232_11 Dihydrodipicolinate synthetase family K21062 - 3.5.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 504.0
PJS3_k127_2001232_12 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 471.0
PJS3_k127_2001232_13 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000659 470.0
PJS3_k127_2001232_14 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 470.0
PJS3_k127_2001232_15 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 465.0
PJS3_k127_2001232_16 alcohol dehydrogenase K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 447.0
PJS3_k127_2001232_17 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 411.0
PJS3_k127_2001232_18 ABC-type polar amino acid transport system ATPase component K02028 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 413.0
PJS3_k127_2001232_19 branched-chain amino acid K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000936 382.0
PJS3_k127_2001232_2 Protein of unknown function (DUF521) K09123 - - 3.377e-240 753.0
PJS3_k127_2001232_20 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 374.0
PJS3_k127_2001232_21 Enoyl-CoA hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007466 366.0
PJS3_k127_2001232_22 ABC-type amino acid transport system permease component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007092 362.0
PJS3_k127_2001232_23 ABC-type amino acid transport system permease component K02029 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000559 359.0
PJS3_k127_2001232_24 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 357.0
PJS3_k127_2001232_25 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 336.0
PJS3_k127_2001232_26 PFAM conserved K02069 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 331.0
PJS3_k127_2001232_27 Mechanosensitive ion channel K22044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 343.0
PJS3_k127_2001232_28 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004132 325.0
PJS3_k127_2001232_29 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005683 324.0
PJS3_k127_2001232_3 Branched-chain amino acid transport system / permease component K01998 - - 1.216e-218 689.0
PJS3_k127_2001232_30 FCD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 308.0
PJS3_k127_2001232_31 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000006302 262.0
PJS3_k127_2001232_32 Dimethlysulfonioproprionate lyase K16953 - 4.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000009581 245.0
PJS3_k127_2001232_33 Bacterial extracellular solute-binding protein K22003 - 5.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000007623 241.0
PJS3_k127_2001232_34 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002138 238.0
PJS3_k127_2001232_35 of the double-stranded beta helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000002047 235.0
PJS3_k127_2001232_36 Tripartite tricarboxylate transporter TctB family K07794 - - 0.00000000000000000000000000000000000000000000000000000000000000003246 226.0
PJS3_k127_2001232_37 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000202 213.0
PJS3_k127_2001232_38 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000006843 213.0
PJS3_k127_2001232_39 COG1560 Lauroyl myristoyl acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000003038 206.0
PJS3_k127_2001232_4 Acyl-CoA dehydrogenase, C-terminal domain K19966 - 3.13.1.4 8.088e-207 650.0
PJS3_k127_2001232_40 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000003381 186.0
PJS3_k127_2001232_41 Domain of unknown function (DUF4198) - - - 0.000000000000000000000000000000000000000000003783 176.0
PJS3_k127_2001232_42 Crp-like helix-turn-helix domain K10914 - - 0.000000000000000000000000000000000000001063 156.0
PJS3_k127_2001232_43 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000004085 153.0
PJS3_k127_2001232_44 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000000000001121 138.0
PJS3_k127_2001232_45 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000000009975 121.0
PJS3_k127_2001232_46 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000003199 117.0
PJS3_k127_2001232_47 Hemerythrin HHE cation binding domain K07216 - - 0.00000000000000000000005296 105.0
PJS3_k127_2001232_48 Belongs to the peptidase S8 family - - - 0.00000000000000000008352 104.0
PJS3_k127_2001232_49 Short C-terminal domain K08982 - - 0.0000000000000000004765 93.0
PJS3_k127_2001232_5 Serine aminopeptidase, S33 - - - 4.366e-206 666.0
PJS3_k127_2001232_50 Dodecin K09165 - - 0.00000000000000004153 81.0
PJS3_k127_2001232_6 Receptor family ligand binding region K01999 - - 1.052e-205 647.0
PJS3_k127_2001232_7 Protein conserved in bacteria K07795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 573.0
PJS3_k127_2001232_8 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009657 556.0
PJS3_k127_2001232_9 hmm pf02515 K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 566.0
PJS3_k127_2040730_0 Belongs to the GcvT family K00315 - 1.5.8.4 1.343e-221 698.0
PJS3_k127_2040730_1 ABC transporter K02056 - 3.6.3.17 3.146e-203 646.0
PJS3_k127_2040730_10 protein, possibly involved in utilization of glycolate and propanediol - - - 0.0000000000000000000000000000000000000000000000000001088 189.0
PJS3_k127_2040730_2 ABC-type transport system, periplasmic component surface lipoprotein K02058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 553.0
PJS3_k127_2040730_3 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009883 481.0
PJS3_k127_2040730_4 PFAM Branched-chain amino acid transport system permease K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 404.0
PJS3_k127_2040730_5 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 386.0
PJS3_k127_2040730_6 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004 360.0
PJS3_k127_2040730_7 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004975 296.0
PJS3_k127_2040730_8 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004665 276.0
PJS3_k127_2040730_9 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000004567 240.0
PJS3_k127_2065606_0 ABC transporter C-terminal domain K15738 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363 - 2.589e-240 757.0
PJS3_k127_2065606_1 beta-keto acid cleavage enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 406.0
PJS3_k127_2065606_2 transport system fused permease components - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004415 372.0
PJS3_k127_2086117_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.795e-299 923.0
PJS3_k127_2086117_1 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 2.295e-240 749.0
PJS3_k127_2086117_10 Preprotein translocase subunit SecG K03075 - - 0.000000000000000000000003372 108.0
PJS3_k127_2086117_11 Septum formation initiator - - - 0.000000000000000000000832 98.0
PJS3_k127_2086117_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 2.834e-205 645.0
PJS3_k127_2086117_3 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00162 - 1.2.4.1 4.238e-196 621.0
PJS3_k127_2086117_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 486.0
PJS3_k127_2086117_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00162,K00627 - 1.2.4.1,2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 488.0
PJS3_k127_2086117_6 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 428.0
PJS3_k127_2086117_7 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 327.0
PJS3_k127_2086117_8 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 300.0
PJS3_k127_2086117_9 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000534 278.0
PJS3_k127_2131901_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1470.0
PJS3_k127_2131901_1 Belongs to the GcvT family K19191 - 1.5.3.19 0.0 1304.0
PJS3_k127_2131901_10 helix_turn_helix ASNC type K03719 - - 0.0000000000000000000000000000000000000000000000000000000000001087 221.0
PJS3_k127_2131901_11 helix_turn_helix ASNC type K03719 - - 0.000000000000000000000000000000000000000000000003239 199.0
PJS3_k127_2131901_2 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1223.0
PJS3_k127_2131901_3 Belongs to the GcvT family K00315 - 1.5.8.4 0.0 1075.0
PJS3_k127_2131901_4 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 5.352e-220 694.0
PJS3_k127_2131901_5 Belongs to the GcvT family K00315 - 1.5.8.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 396.0
PJS3_k127_2131901_6 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 331.0
PJS3_k127_2131901_7 Family of unknown function (DUF1028) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005771 287.0
PJS3_k127_2131901_8 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001126 242.0
PJS3_k127_2131901_9 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000007875 237.0
PJS3_k127_2132961_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 2.071e-212 676.0
PJS3_k127_2132961_1 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 323.0
PJS3_k127_2132961_2 Belongs to the thiolase family K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000006851 158.0
PJS3_k127_2132961_3 Transcriptional regulators - - - 0.0000000000000000000000000000000000000008014 151.0
PJS3_k127_2146395_0 COG0457 FOG TPR repeat - - - 1.373e-240 754.0
PJS3_k127_2146395_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 366.0
PJS3_k127_2146395_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 302.0
PJS3_k127_2183972_0 Transcriptional regulator K05800 - - 0.00000000000000000000000000000000000000000000000000000000006895 214.0
PJS3_k127_2183972_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000001179 165.0
PJS3_k127_2183972_2 - - - - 0.000000000000000000008783 95.0
PJS3_k127_2183972_3 Protein of unknown function (DUF1134) - - - 0.000000000000002931 79.0
PJS3_k127_22001_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 291.0
PJS3_k127_22001_1 Esterase PHB depolymerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002028 237.0
PJS3_k127_22001_2 Transposase - - - 0.00000000000000001864 87.0
PJS3_k127_22001_3 KR domain - - - 0.00000000000000003311 83.0
PJS3_k127_2208808_0 Acts on guanine, xanthine and to a lesser extent hypoxanthine K00769 - 2.4.2.22 0.0000000000000000000000000000000000000000000000000000000000000000000001616 242.0
PJS3_k127_2208808_1 - - - - 0.0000000000000001254 87.0
PJS3_k127_2208808_2 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.0000000000001965 81.0
PJS3_k127_222415_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 483.0
PJS3_k127_222415_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006971 280.0
PJS3_k127_2298615_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 6.545e-274 859.0
PJS3_k127_2298615_1 Polysaccharide biosynthesis protein - - - 2.656e-196 631.0
PJS3_k127_2298615_2 sulfate adenylyltransferase subunit 2 K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 479.0
PJS3_k127_2298615_3 Reductase C-terminal K00529 - 1.18.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000002648 251.0
PJS3_k127_235964_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 8.133e-198 640.0
PJS3_k127_235964_1 TonB-dependent Receptor Plug Domain K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 534.0
PJS3_k127_235964_2 Ring hydroxylating alpha subunit (catalytic domain) K00499 - 1.14.15.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 439.0
PJS3_k127_235964_3 FecCD transport family K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 373.0
PJS3_k127_235964_4 Transcriptional regulator K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000833 314.0
PJS3_k127_235964_5 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001579 279.0
PJS3_k127_235964_6 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000002328 278.0
PJS3_k127_235964_7 COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.00000000000000000000000000000000000000000000000000000000000009381 225.0
PJS3_k127_235964_8 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000000000001654 193.0
PJS3_k127_235964_9 Amidinotransferase - - - 0.00000000000000000000000000000000000000001225 168.0
PJS3_k127_2367749_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.592e-234 730.0
PJS3_k127_2367749_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 449.0
PJS3_k127_2367749_2 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 411.0
PJS3_k127_2367749_3 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000003403 230.0
PJS3_k127_2367749_4 - - - - 0.000000000000000000000000000000000000000000000008158 180.0
PJS3_k127_2367749_5 Domain of unknown function (DUF1849) - - - 0.000000000000000000000000000000000000001967 157.0
PJS3_k127_2396917_0 NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit K05559 - - 0.0 1536.0
PJS3_k127_2396917_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 5.757e-251 788.0
PJS3_k127_2396917_10 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008889 381.0
PJS3_k127_2396917_11 N-terminal half of MaoC dehydratase K09709,K18291 - 4.2.1.153,4.2.1.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 310.0
PJS3_k127_2396917_12 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005184 267.0
PJS3_k127_2396917_13 Na+/H+ ion antiporter subunit K05562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004016 254.0
PJS3_k127_2396917_14 epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000003715 198.0
PJS3_k127_2396917_15 COG1320 Multisubunit Na H antiporter, MnhG subunit K05564 - - 0.000000000000000000000000000000000000000000000000001188 186.0
PJS3_k127_2396917_16 Multisubunit Na H antiporter, MnhC subunit K05560 - - 0.000000000000000000000000000000000000000000004722 166.0
PJS3_k127_2396917_17 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000001408 162.0
PJS3_k127_2396917_18 COG2212 Multisubunit Na H antiporter, MnhF subunit K05563 - - 0.000000000000000000000000000000000002784 141.0
PJS3_k127_2396917_2 COG0651 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K05561 - - 1.314e-232 729.0
PJS3_k127_2396917_20 Protein of unknown function (DUF3726) - - - 0.000000000002276 76.0
PJS3_k127_2396917_3 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 3.752e-196 617.0
PJS3_k127_2396917_4 Threonine synthase K01733 - 4.2.3.1 5.558e-194 614.0
PJS3_k127_2396917_5 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 517.0
PJS3_k127_2396917_6 COG0534 Na -driven multidrug efflux pump K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 489.0
PJS3_k127_2396917_7 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 477.0
PJS3_k127_2396917_8 Belongs to the mandelate racemase muconate lactonizing enzyme family K19802 - 5.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000358 440.0
PJS3_k127_2396917_9 Belongs to the LDH2 MDH2 oxidoreductase family K16844 - 1.1.1.338 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 407.0
PJS3_k127_2444581_0 belongs to the aldehyde dehydrogenase family - - - 3.914e-249 776.0
PJS3_k127_2444581_1 Na+/Pi-cotransporter K03324 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 573.0
PJS3_k127_2444581_10 Metal dependent phosphohydrolases with conserved 'HD' motif. K00471 - 1.14.11.1 0.000000000000000000000000000000000000004374 158.0
PJS3_k127_2444581_2 PFAM type I phosphodiesterase nucleotide pyrophosphatase K19670 - 3.11.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 557.0
PJS3_k127_2444581_3 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 538.0
PJS3_k127_2444581_4 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K03430 - 2.6.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009959 532.0
PJS3_k127_2444581_5 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 501.0
PJS3_k127_2444581_6 Ureidoglycolate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 344.0
PJS3_k127_2444581_7 transcriptional regulator K21703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006026 284.0
PJS3_k127_2444581_8 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000666 267.0
PJS3_k127_2444581_9 Belongs to the ABC transporter superfamily - - - 0.00000000000000000000000000000000000000000002741 164.0
PJS3_k127_2532473_0 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 1.497e-285 882.0
PJS3_k127_2532473_1 Acetyl propionyl-CoA carboxylase alpha subunit K01965 GO:0003674,GO:0003824,GO:0004658,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009374,GO:0009987,GO:0016421,GO:0016874,GO:0016885,GO:0017144,GO:0019752,GO:0019842,GO:0019899,GO:0031406,GO:0031974,GO:0032787,GO:0033218,GO:0033293,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0070013,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901681 6.4.1.3 9.653e-277 865.0
PJS3_k127_2532473_10 AsmA family K07289,K07290 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 384.0
PJS3_k127_2532473_11 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009877 364.0
PJS3_k127_2532473_12 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 338.0
PJS3_k127_2532473_13 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 287.0
PJS3_k127_2532473_14 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009309 286.0
PJS3_k127_2532473_15 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 282.0
PJS3_k127_2532473_16 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003354 273.0
PJS3_k127_2532473_17 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000001555 246.0
PJS3_k127_2532473_18 binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000000000000000000000002475 232.0
PJS3_k127_2532473_19 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000006078 220.0
PJS3_k127_2532473_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 3.95e-231 722.0
PJS3_k127_2532473_20 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000000000000005455 217.0
PJS3_k127_2532473_21 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000001029 218.0
PJS3_k127_2532473_22 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000001504 216.0
PJS3_k127_2532473_23 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000002769 212.0
PJS3_k127_2532473_24 COG5387 Chaperone required for the assembly of the mitochondrial F1-ATPase - - - 0.00000000000000000000000000000000000000000000000000000000002696 215.0
PJS3_k127_2532473_25 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000002476 208.0
PJS3_k127_2532473_26 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000004952 199.0
PJS3_k127_2532473_27 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000001301 199.0
PJS3_k127_2532473_28 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000000000000000209 185.0
PJS3_k127_2532473_29 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000000000000000000000002874 186.0
PJS3_k127_2532473_3 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 1.037e-208 655.0
PJS3_k127_2532473_30 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000000000001804 161.0
PJS3_k127_2532473_31 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000000000000000000000000000000007372 160.0
PJS3_k127_2532473_32 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000000000000000000000007086 149.0
PJS3_k127_2532473_33 - - - - 0.00000000000000000000000000000000000004411 147.0
PJS3_k127_2532473_34 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000000000000000001502 145.0
PJS3_k127_2532473_35 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000003363 135.0
PJS3_k127_2532473_36 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000000000000000001239 124.0
PJS3_k127_2532473_37 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.000000000000000000000000963 106.0
PJS3_k127_2532473_38 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000004164 92.0
PJS3_k127_2532473_39 Ribosomal protein L30p/L7e K02907 - - 0.00000000000000000003827 91.0
PJS3_k127_2532473_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 595.0
PJS3_k127_2532473_40 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000000000007383 90.0
PJS3_k127_2532473_5 Belongs to the peptidase S1C family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 499.0
PJS3_k127_2532473_6 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007401 485.0
PJS3_k127_2532473_7 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 428.0
PJS3_k127_2532473_8 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 392.0
PJS3_k127_2532473_9 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 374.0
PJS3_k127_2630960_0 Belongs to the GcvT family K19191 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006520,GO:0006575,GO:0006576,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008480,GO:0009056,GO:0009063,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016491,GO:0016645,GO:0019695,GO:0019752,GO:0019842,GO:0031406,GO:0031974,GO:0033218,GO:0034641,GO:0035999,GO:0036094,GO:0042133,GO:0042135,GO:0042219,GO:0042402,GO:0042426,GO:0042558,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046483,GO:0046653,GO:0046997,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0055114,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0072341,GO:0097159,GO:0097164,GO:1901052,GO:1901053,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.5.3.19 0.0 1368.0
PJS3_k127_2630960_1 Belongs to the GcvT family K19191 - 1.5.3.19 0.0 1218.0
PJS3_k127_2630960_2 Binding-protein-dependent transport system inner membrane component K02001 - - 1.393e-290 905.0
PJS3_k127_2630960_3 ABC-type Fe3 transport system permease component K02011 - - 2.628e-249 786.0
PJS3_k127_2630960_4 Substrate binding domain of ABC-type glycine betaine transport system K02002 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 544.0
PJS3_k127_2630960_5 ATPases associated with a variety of cellular activities K02000 - 3.6.3.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006216 475.0
PJS3_k127_2630960_6 Choline kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 398.0
PJS3_k127_2630960_7 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02052 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 306.0
PJS3_k127_2630960_8 DeoR C terminal sensor domain K02444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 299.0
PJS3_k127_2630960_9 HAD-superfamily hydrolase subfamily IA, variant K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000008789 203.0
PJS3_k127_2651359_0 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 2.561e-205 649.0
PJS3_k127_2651359_1 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008048 568.0
PJS3_k127_2651359_10 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000001083 233.0
PJS3_k127_2651359_11 ABC-2 type transporter - - - 0.0000000000000000000000000000000000000000000000000000000000009002 219.0
PJS3_k127_2651359_12 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000000000000000000000000000001824 203.0
PJS3_k127_2651359_13 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000001478 199.0
PJS3_k127_2651359_14 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000000000000002354 168.0
PJS3_k127_2651359_15 - - - - 0.0000000000000000000000007862 112.0
PJS3_k127_2651359_16 Protein of unknown function (DUF1289) K06938 - - 0.0000000000000000000004112 98.0
PJS3_k127_2651359_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 455.0
PJS3_k127_2651359_3 Peptidase dimerisation domain K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 422.0
PJS3_k127_2651359_4 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 359.0
PJS3_k127_2651359_5 GTP cyclohydrolase K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 332.0
PJS3_k127_2651359_6 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 312.0
PJS3_k127_2651359_7 transport system, ATPase component K05779 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 283.0
PJS3_k127_2651359_8 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000007808 241.0
PJS3_k127_2651359_9 cobalamin synthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001455 233.0
PJS3_k127_2652690_0 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 4.377e-252 786.0
PJS3_k127_2652690_1 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 308.0
PJS3_k127_2652690_2 isochorismatase, hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000001414 229.0
PJS3_k127_2652690_3 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain - - - 0.00000000000000000000000000000000000000000001022 164.0
PJS3_k127_2652690_4 - - - - 0.00000000000000000000000000000000000003053 161.0
PJS3_k127_2659925_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 6.287e-265 837.0
PJS3_k127_2659925_1 Belongs to the TPP enzyme family K01652 - 2.2.1.6 9.011e-253 791.0
PJS3_k127_2659925_10 fumarylacetoacetate (FAA) hydrolase K16165 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0008948,GO:0016787,GO:0016822,GO:0016823,GO:0016829,GO:0016830,GO:0016831,GO:0018773,GO:0031974,GO:0031981,GO:0034545,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0070013 3.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 361.0
PJS3_k127_2659925_11 Belongs to the enoyl-CoA hydratase isomerase family K01692,K11264 - 4.1.1.41,4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 348.0
PJS3_k127_2659925_12 homocysteine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 348.0
PJS3_k127_2659925_13 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 325.0
PJS3_k127_2659925_14 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006236 298.0
PJS3_k127_2659925_15 Nucleoside 2-deoxyribosyltransferase YtoQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001249 273.0
PJS3_k127_2659925_16 COG1994 Zn-dependent proteases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004866 252.0
PJS3_k127_2659925_17 membrane transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000134 235.0
PJS3_k127_2659925_18 Flavin containing amine oxidoreductase K06955 - - 0.000000000000000000000000000000000000000000000000000000000000001167 229.0
PJS3_k127_2659925_19 FCD - - - 0.0000000000000000000000000000000000000000000000000000004742 201.0
PJS3_k127_2659925_2 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 5.447e-211 668.0
PJS3_k127_2659925_20 FCD - - - 0.00000000000000000000000000000000000000000000000000286 190.0
PJS3_k127_2659925_21 - - - - 0.0000000000000000000000000000000000000000000000001205 183.0
PJS3_k127_2659925_22 Conserved Protein - - - 0.0000000000000000000000000000000000000000000000002024 183.0
PJS3_k127_2659925_23 - - - - 0.000000000000000000000000000000000000000000000004964 177.0
PJS3_k127_2659925_24 - - - - 0.0000000000000000000001184 104.0
PJS3_k127_2659925_25 Domain of unknown function (DUF4332) - - - 0.00000002256 58.0
PJS3_k127_2659925_3 COG0433 Predicted ATPase K06915 - - 2.567e-203 645.0
PJS3_k127_2659925_4 L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 569.0
PJS3_k127_2659925_5 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 469.0
PJS3_k127_2659925_6 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009756 460.0
PJS3_k127_2659925_7 Transition state regulatory protein AbrB K07120 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 449.0
PJS3_k127_2659925_8 Class II aldolase adducin family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 426.0
PJS3_k127_2659925_9 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 385.0
PJS3_k127_2669592_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.3e-278 861.0
PJS3_k127_2669592_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 5.827e-275 864.0
PJS3_k127_2669592_10 NADPH-quinone reductase (modulator of drug activity B) - - - 0.000000000000000000000000000000000000000000000000000000000000000001973 231.0
PJS3_k127_2669592_11 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000000003864 227.0
PJS3_k127_2669592_12 protein conserved in bacteria K09921 - - 0.00000000000000000000000000000000000000000000000000000000000000267 236.0
PJS3_k127_2669592_13 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000000000000006187 166.0
PJS3_k127_2669592_14 PFAM Acetyltransferase (GNAT) family K03395 - 2.3.1.60 0.00000000000000000000000000000000000000000001011 168.0
PJS3_k127_2669592_15 Nitrile hydratase beta subunit - - - 0.000000000000000000000000001345 120.0
PJS3_k127_2669592_16 response to cobalt ion - - - 0.000000000001688 74.0
PJS3_k127_2669592_17 Zn_pept K01308 - 3.4.19.11 0.00000000001988 70.0
PJS3_k127_2669592_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 6.609e-266 825.0
PJS3_k127_2669592_3 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 6.275e-206 649.0
PJS3_k127_2669592_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 389.0
PJS3_k127_2669592_5 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 376.0
PJS3_k127_2669592_6 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 359.0
PJS3_k127_2669592_7 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 353.0
PJS3_k127_2669592_8 PFAM Nitrile hydratase alpha chain K01721 - 4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 325.0
PJS3_k127_2669592_9 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 322.0
PJS3_k127_2687508_0 DNA helicase K03657 - 3.6.4.12 0.0 1061.0
PJS3_k127_2687508_1 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 1.632e-228 715.0
PJS3_k127_2687508_2 Voltage gated chloride channel K03281 - - 2.224e-205 657.0
PJS3_k127_2687508_3 oxidase, subunit K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 507.0
PJS3_k127_2687508_4 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 376.0
PJS3_k127_2687508_5 ribosomal protein L11 K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 316.0
PJS3_k127_2687508_6 Pfam:Pyridox_oxidase K07006 - - 0.00000000000000000000000004914 108.0
PJS3_k127_2743884_0 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 353.0
PJS3_k127_2743884_1 Binding-protein-dependent transport system inner membrane component K02029,K10019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 295.0
PJS3_k127_2743884_2 Binding-protein-dependent transport system inner membrane component K02029,K10020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001889 252.0
PJS3_k127_2743884_3 Bacterial periplasmic substrate-binding proteins K09997 - - 0.0000000000000000000000000000000000000000000001055 170.0
PJS3_k127_2758767_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 562.0
PJS3_k127_2758767_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000743 522.0
PJS3_k127_2758767_10 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000000002478 147.0
PJS3_k127_2758767_11 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.0000000000000000000000000000000000008512 139.0
PJS3_k127_2758767_12 receptor - - - 0.000000001752 59.0
PJS3_k127_2758767_2 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006121 521.0
PJS3_k127_2758767_3 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 478.0
PJS3_k127_2758767_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 465.0
PJS3_k127_2758767_5 COG4942 Membrane-bound metallopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001294 259.0
PJS3_k127_2758767_6 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000005121 231.0
PJS3_k127_2758767_7 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000000007926 222.0
PJS3_k127_2758767_8 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000004545 176.0
PJS3_k127_2758767_9 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000000000000000000000000000004667 161.0
PJS3_k127_278373_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 547.0
PJS3_k127_278373_1 Amino-transferase class IV K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 381.0
PJS3_k127_278373_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008163 263.0
PJS3_k127_278373_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000001796 255.0
PJS3_k127_278373_4 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000006652 241.0
PJS3_k127_2785416_0 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K13598 - 2.7.13.3 2.072e-236 752.0
PJS3_k127_2785416_1 Potassium transporter peripheral membrane component K03499 - - 3.241e-229 716.0
PJS3_k127_2785416_10 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000001657 189.0
PJS3_k127_2785416_11 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000006556 162.0
PJS3_k127_2785416_12 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000000000009202 152.0
PJS3_k127_2785416_13 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000007466 78.0
PJS3_k127_2785416_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 2.185e-223 703.0
PJS3_k127_2785416_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13599 - - 1.225e-199 633.0
PJS3_k127_2785416_4 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004224 490.0
PJS3_k127_2785416_5 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 442.0
PJS3_k127_2785416_6 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 334.0
PJS3_k127_2785416_7 COG2867 Oligoketide cyclase lipid transport protein K18588 - - 0.000000000000000000000000000000000000000000000000000000000000000002046 231.0
PJS3_k127_2785416_8 HAD-superfamily hydrolase subfamily IA, variant 1 K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000007648 214.0
PJS3_k127_2785416_9 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000000000000000001246 188.0
PJS3_k127_2802699_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006401 547.0
PJS3_k127_2802699_1 Aminotransferase class-V K04487 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006790,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016043,GO:0016226,GO:0016740,GO:0016782,GO:0016783,GO:0017076,GO:0022607,GO:0030554,GO:0031071,GO:0031163,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009283 439.0
PJS3_k127_2802699_10 SCP-2 sterol transfer family - - - 0.00000000000000000000005277 104.0
PJS3_k127_2802699_11 Phospholipase_D-nuclease N-terminal - - - 0.00000000000000112 78.0
PJS3_k127_2802699_2 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 433.0
PJS3_k127_2802699_3 X-Pro dipeptidyl-peptidase (S15 family) K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 350.0
PJS3_k127_2802699_4 COG1104 Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 350.0
PJS3_k127_2802699_5 serine acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 312.0
PJS3_k127_2802699_6 alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007645 267.0
PJS3_k127_2802699_7 transcriptional regulator K13643 - - 0.0000000000000000000000000000000000000000000000000000000000001428 218.0
PJS3_k127_2802699_8 Ferredoxin K04755 - - 0.0000000000000000000000000000000000000000000000000002382 186.0
PJS3_k127_2802699_9 Belongs to the small heat shock protein (HSP20) family K13993 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006457,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0033554,GO:0034605,GO:0034620,GO:0035966,GO:0035967,GO:0042221,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0050896,GO:0051082,GO:0051716,GO:0051788,GO:0061077,GO:0070887,GO:0071218,GO:0071310 - 0.000000000000000000000000004204 117.0
PJS3_k127_2886454_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 4.294e-199 646.0
PJS3_k127_2886543_0 Hydantoinase/oxoprolinase N-terminal region K01469 - 3.5.2.9 0.0 1805.0
PJS3_k127_2886543_1 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K01847 - 5.4.99.2 0.0 1105.0
PJS3_k127_2886543_10 COG3023 Negative regulator of beta-lactamase expression K01447 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000345 279.0
PJS3_k127_2886543_11 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000001766 213.0
PJS3_k127_2886543_12 Belongs to the small heat shock protein (HSP20) family K04080 - - 0.0000000000000000000000000000000000000000000000000000000002163 207.0
PJS3_k127_2886543_13 transcription regulator, contains HTH domain (MarR family) - - - 0.000000000000000000000000000000000000000000000000000000001496 206.0
PJS3_k127_2886543_14 Lactoylglutathione lyase and related lyases - - - 0.00000000000000000000000000000000000000000002417 169.0
PJS3_k127_2886543_15 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000000000000001107 164.0
PJS3_k127_2886543_16 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000000000000004864 140.0
PJS3_k127_2886543_17 50S ribosomal protein L31 K02909 - - 0.000000000000000000000000000000000007754 138.0
PJS3_k127_2886543_18 EamA-like transporter family - - - 0.000000000000000000000000000001557 124.0
PJS3_k127_2886543_2 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components K06147 - - 3.925e-248 780.0
PJS3_k127_2886543_3 TIGRFAM ATP-dependent DNA helicase, RecQ K03654 - 3.6.4.12 7.295e-245 770.0
PJS3_k127_2886543_4 ABC-type multidrug transport system, ATPase and permease K06147 - - 1.731e-229 728.0
PJS3_k127_2886543_5 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009859 408.0
PJS3_k127_2886543_6 Tellurite resistance protein TerB K05801 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 342.0
PJS3_k127_2886543_7 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008158 331.0
PJS3_k127_2886543_8 sugar phosphatases of the HAD superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006334 304.0
PJS3_k127_2886543_9 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily K15268 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 297.0
PJS3_k127_2904103_0 ATPase with chaperone activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 340.0
PJS3_k127_2921847_0 His Kinase A (phosphoacceptor) domain - - - 1.434e-303 955.0
PJS3_k127_2921847_1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 5.628e-254 790.0
PJS3_k127_2921847_10 IrrE N-terminal-like domain K07110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 304.0
PJS3_k127_2921847_11 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001079 284.0
PJS3_k127_2921847_12 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000285 201.0
PJS3_k127_2921847_13 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000772 196.0
PJS3_k127_2921847_14 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000429 144.0
PJS3_k127_2921847_15 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000000000000000000000000000001273 140.0
PJS3_k127_2921847_16 UDP-glucoronosyl and UDP-glucosyl transferase K14596 - 2.4.1.276 0.000000000000000000000000000005129 134.0
PJS3_k127_2921847_17 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000626 126.0
PJS3_k127_2921847_18 NUDIX domain - - - 0.000000000000000000000000000009917 123.0
PJS3_k127_2921847_19 Cation efflux family - - - 0.00000000000000000000000000001148 119.0
PJS3_k127_2921847_2 Oxidative deamination of D-amino acids K00285 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0008718,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009987,GO:0016020,GO:0016054,GO:0016491,GO:0016638,GO:0019478,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046144,GO:0046395,GO:0046416,GO:0046436,GO:0055114,GO:0055130,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.5.1 9.225e-211 661.0
PJS3_k127_2921847_20 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000001165 102.0
PJS3_k127_2921847_21 Belongs to the ompA family - - - 0.000008448 53.0
PJS3_k127_2921847_22 - - - - 0.00002691 50.0
PJS3_k127_2921847_3 Phosphate K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003497 608.0
PJS3_k127_2921847_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 554.0
PJS3_k127_2921847_5 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 528.0
PJS3_k127_2921847_6 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042 411.0
PJS3_k127_2921847_7 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 389.0
PJS3_k127_2921847_8 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 343.0
PJS3_k127_2921847_9 COG0625 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004432 295.0
PJS3_k127_299423_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 392.0
PJS3_k127_299423_1 - - - - 0.0009052 49.0
PJS3_k127_2994632_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1101.0
PJS3_k127_2994632_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 1.809e-303 948.0
PJS3_k127_2994632_10 Flavin containing amine oxidoreductase K21677 - 1.17.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007841 371.0
PJS3_k127_2994632_11 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004478 306.0
PJS3_k127_2994632_12 CorA-like Mg2+ transporter protein K03284,K16074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 295.0
PJS3_k127_2994632_13 N-formylglutamate amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003885 277.0
PJS3_k127_2994632_14 Metal dependent phosphohydrolases with conserved 'HD' motif. K06952 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001104 248.0
PJS3_k127_2994632_15 Squalene/phytoene synthase K21678,K21679 - 2.5.1.103,4.2.3.156 0.00000000000000000000000000000000000000000000000000000000000000000000001129 254.0
PJS3_k127_2994632_16 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000001529 249.0
PJS3_k127_2994632_17 Phytoene synthase K21678 - 2.5.1.103 0.00000000000000000000000000000000000000000000000000000000000001578 233.0
PJS3_k127_2994632_18 COG3288 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000005226 178.0
PJS3_k127_2994632_19 Protein of unknown function (DUF1244) K09948 - - 0.00000000000000000000000000000000000001339 166.0
PJS3_k127_2994632_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 4.006e-223 698.0
PJS3_k127_2994632_20 Sortase family K07284 - 3.4.22.70 0.00000000000000000000000000000000000002552 155.0
PJS3_k127_2994632_21 Uncharacterized protein conserved in bacteria (DUF2312) - - - 0.000000000000000000000000000000525 124.0
PJS3_k127_2994632_22 protein conserved in bacteria K09796 - - 0.0000000000000000000000003793 111.0
PJS3_k127_2994632_23 - - - - 0.00000000000000005571 89.0
PJS3_k127_2994632_3 Aminotransferase K00812 - 2.6.1.1 4.46e-210 659.0
PJS3_k127_2994632_4 ABC1 family - - - 9.489e-207 653.0
PJS3_k127_2994632_5 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 546.0
PJS3_k127_2994632_6 Proline racemase K12658 - 5.1.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 530.0
PJS3_k127_2994632_7 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 514.0
PJS3_k127_2994632_8 transhydrogenase subunit alpha K00324 GO:0000166,GO:0003674,GO:0003824,GO:0003957,GO:0005215,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006740,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0008746,GO:0008750,GO:0009117,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0016491,GO:0016651,GO:0016652,GO:0019362,GO:0019637,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046496,GO:0046983,GO:0048037,GO:0050662,GO:0051179,GO:0051186,GO:0051234,GO:0051287,GO:0055085,GO:0055086,GO:0055114,GO:0070403,GO:0070404,GO:0071704,GO:0072524,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902600 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 500.0
PJS3_k127_2994632_9 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 511.0
PJS3_k127_3009864_0 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 2.139e-303 935.0
PJS3_k127_3009864_1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375 - - 1.133e-242 771.0
PJS3_k127_3009864_10 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000005707 134.0
PJS3_k127_3009864_11 - - - - 0.00000002013 63.0
PJS3_k127_3009864_2 FAD dependent oxidoreductase - - - 2.558e-218 683.0
PJS3_k127_3009864_3 Bacterial extracellular solute-binding protein K11069 - - 1.187e-212 662.0
PJS3_k127_3009864_4 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 1.542e-207 659.0
PJS3_k127_3009864_5 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 7.257e-207 666.0
PJS3_k127_3009864_6 Belongs to the ABC transporter superfamily K11072 - 3.6.3.31 1.305e-200 628.0
PJS3_k127_3009864_7 Binding-protein-dependent transport system inner membrane component K11071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 529.0
PJS3_k127_3009864_8 Binding-protein-dependent transport system inner membrane component K11070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 490.0
PJS3_k127_3009864_9 sh3 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 389.0
PJS3_k127_3012118_0 Ferrochelatase K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 447.0
PJS3_k127_3012118_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007534 435.0
PJS3_k127_3012118_2 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 384.0
PJS3_k127_3012118_3 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000001255 237.0
PJS3_k127_3012118_4 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000214 190.0
PJS3_k127_3022600_0 Transposase DDE domain group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 312.0
PJS3_k127_3022600_1 GYD domain - - - 0.0000000000000000000000000000000006374 133.0
PJS3_k127_3031102_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1005.0
PJS3_k127_3031102_1 ABC-type dipeptide transport system periplasmic component K02035 - - 2.908e-245 774.0
PJS3_k127_3031102_10 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 437.0
PJS3_k127_3031102_11 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 428.0
PJS3_k127_3031102_12 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007844 418.0
PJS3_k127_3031102_13 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 415.0
PJS3_k127_3031102_14 Binding-protein-dependent transport system inner membrane component K11070,K11074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 404.0
PJS3_k127_3031102_15 Binding-protein-dependent transport system inner membrane component K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005423 403.0
PJS3_k127_3031102_16 multidrug efflux K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 401.0
PJS3_k127_3031102_17 rRNA methylase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007547 386.0
PJS3_k127_3031102_18 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 352.0
PJS3_k127_3031102_19 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 338.0
PJS3_k127_3031102_2 Belongs to the TPP enzyme family K01652 - 2.2.1.6 3.908e-216 685.0
PJS3_k127_3031102_20 Sensory box histidine kinase response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 364.0
PJS3_k127_3031102_21 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000001228 256.0
PJS3_k127_3031102_22 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001291 235.0
PJS3_k127_3031102_23 Belongs to the UPF0260 family K09160 - - 0.000000000000000000000000000000000000000000000000000000001244 205.0
PJS3_k127_3031102_24 Membrane K15977 - - 0.00000000000000000000000000000000000000000000000003925 183.0
PJS3_k127_3031102_25 GcrA cell cycle regulator K13583 - - 0.00000000000000000000000000000000001974 140.0
PJS3_k127_3031102_26 - - - - 0.00000000000000000000000000000000004161 143.0
PJS3_k127_3031102_27 transcriptional regulators K22042 - - 0.000000000000000000000000000002153 123.0
PJS3_k127_3031102_28 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000000001271 99.0
PJS3_k127_3031102_29 small membrane protein - - - 0.000000000000000000006018 102.0
PJS3_k127_3031102_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007771 589.0
PJS3_k127_3031102_30 Belongs to the sulfur carrier protein TusA family K04085 - - 0.00000000000000000001541 93.0
PJS3_k127_3031102_31 Acetyltransferase (GNAT) family - - - 0.00000000000000009618 87.0
PJS3_k127_3031102_32 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07669,K07672 - - 0.0000000000000002363 83.0
PJS3_k127_3031102_4 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 558.0
PJS3_k127_3031102_5 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009646 530.0
PJS3_k127_3031102_6 Required for the activity of the bacterial periplasmic transport system of putrescine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004781 523.0
PJS3_k127_3031102_7 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 479.0
PJS3_k127_3031102_8 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 445.0
PJS3_k127_3031102_9 COG0616 Periplasmic serine proteases (ClpP class) K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 449.0
PJS3_k127_30555_0 COG0768 cell division protein FtsI penicillin-binding protein 2 K05515 - 3.4.16.4 5.177e-254 798.0
PJS3_k127_30555_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007554 518.0
PJS3_k127_30555_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 438.0
PJS3_k127_30555_3 shape-determining protein K03571 - - 0.0000000000000000000000000000000000001076 149.0
PJS3_k127_30555_4 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000375 142.0
PJS3_k127_3055649_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 552.0
PJS3_k127_3055649_1 Carbon-nitrogen hydrolase K11206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 364.0
PJS3_k127_3055649_10 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000305 111.0
PJS3_k127_3055649_11 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.000000000000008782 74.0
PJS3_k127_3055649_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 354.0
PJS3_k127_3055649_3 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001858 263.0
PJS3_k127_3055649_4 Belongs to the Nudix hydrolase family K03574 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000001222 235.0
PJS3_k127_3055649_5 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000008206 219.0
PJS3_k127_3055649_6 PFAM Methyltransferase type - - - 0.0000000000000000000000000000000000000000000000000000000805 201.0
PJS3_k127_3055649_7 Protein of unknown function (DUF1178) - - - 0.000000000000000000000000000000000000575 143.0
PJS3_k127_3055649_8 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000000000000000000000000001029 132.0
PJS3_k127_3055649_9 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000507 129.0
PJS3_k127_3136527_0 ABC transporter K06158 - - 6.809e-229 727.0
PJS3_k127_3136527_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000000008225 250.0
PJS3_k127_3136527_2 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000002854 244.0
PJS3_k127_3136527_3 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.000000000000000000000000000000000000000000000000003342 185.0
PJS3_k127_3136527_4 Acetyltransferase (GNAT) domain K03824 - - 0.00000000000000000000000000000000000000000000001288 183.0
PJS3_k127_3136527_5 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.00000000000000000000000000000000000000000004922 176.0
PJS3_k127_3210391_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 1.711e-284 892.0
PJS3_k127_3210391_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 3.273e-196 616.0
PJS3_k127_3210391_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005507 604.0
PJS3_k127_3210391_3 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 583.0
PJS3_k127_3210391_4 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002896 480.0
PJS3_k127_3210391_5 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004792 306.0
PJS3_k127_3210391_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002972 283.0
PJS3_k127_3210391_7 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001429 284.0
PJS3_k127_3210391_8 Domain of unknown function (DUF4115) K15539 - - 0.00000000000000000000000000000000000000000000000000000000000009448 229.0
PJS3_k127_3210391_9 Domain of unknown function (DUF4167) - - - 0.00000000000000000000000002069 111.0
PJS3_k127_3245680_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 1.073e-246 766.0
PJS3_k127_3245680_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005795 478.0
PJS3_k127_3245680_2 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001091 272.0
PJS3_k127_3245680_3 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000001884 250.0
PJS3_k127_3245680_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000002775 161.0
PJS3_k127_3245680_5 Evidence 5 No homology to any previously reported sequences - - - 0.000000002365 59.0
PJS3_k127_3245680_6 - - - - 0.0000005872 55.0
PJS3_k127_3245680_7 EF-hand, calcium binding motif - - - 0.000003644 54.0
PJS3_k127_3265835_0 Type II secretion system (T2SS), protein F - - - 0.000000000000000000000000000000000000000000000000000000002009 212.0
PJS3_k127_3265835_1 Type IV pilus biogenesis stability protein PilW - - - 0.000000001038 70.0
PJS3_k127_3265835_2 Type II secretion system K12510 - - 0.0000006255 53.0
PJS3_k127_3281900_0 Belongs to the GcvT family K00315 - 1.5.8.4 0.0 1300.0
PJS3_k127_3281900_1 Malic enzyme K00029 GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.40 0.0 1086.0
PJS3_k127_3281900_10 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000005035 194.0
PJS3_k127_3281900_11 Glutathione S-transferase, N-terminal domain - - - 0.00000000000000000000000000000000000000000004194 169.0
PJS3_k127_3281900_12 protein, possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000000000000000628 162.0
PJS3_k127_3281900_13 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000127 159.0
PJS3_k127_3281900_14 protein conserved in bacteria K09794 - - 0.00000000000000000000004508 101.0
PJS3_k127_3281900_2 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 2.866e-216 676.0
PJS3_k127_3281900_3 Q COG1233 Phytoene dehydrogenase and related proteins - - - 4.238e-213 674.0
PJS3_k127_3281900_4 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 563.0
PJS3_k127_3281900_5 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005324 473.0
PJS3_k127_3281900_6 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 325.0
PJS3_k127_3281900_7 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 316.0
PJS3_k127_3281900_8 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 315.0
PJS3_k127_3281900_9 Belongs to the ClpA ClpB family K03694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001578 277.0
PJS3_k127_3287530_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.773e-246 767.0
PJS3_k127_3287530_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009682 456.0
PJS3_k127_3287530_2 exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 367.0
PJS3_k127_3287530_3 COG2040 Homocysteine selenocysteine methylase (S-methylmethionine-dependent) K00547 - 2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003583 313.0
PJS3_k127_3287530_4 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 307.0
PJS3_k127_3287530_5 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 295.0
PJS3_k127_3287530_6 Protein required for attachment to host cells - - - 0.00000000000000000000000000000000002513 148.0
PJS3_k127_3287530_7 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000001641 124.0
PJS3_k127_3287782_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 552.0
PJS3_k127_3287782_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000008421 89.0
PJS3_k127_3287782_2 Evidence 4 Homologs of previously reported genes of - - - 0.00001155 48.0
PJS3_k127_3289398_0 Sodium:alanine symporter family K03310 - - 3.247e-217 685.0
PJS3_k127_3289398_1 Adenylosuccinate lyase C-terminus K01756,K01857 - 4.3.2.2,5.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009206 434.0
PJS3_k127_3289398_2 Uncharacterised MFS-type transporter YbfB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 361.0
PJS3_k127_3289398_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002151 273.0
PJS3_k127_3289398_4 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000000000000000000000000000000005148 160.0
PJS3_k127_3289398_5 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.0000000000000000000000000000000000000001644 154.0
PJS3_k127_3289398_6 Glycosyltransferase family 87 - - - 0.00000000000000000000006768 112.0
PJS3_k127_3289398_7 Acyltransferase family - - - 0.000000000004741 78.0
PJS3_k127_3309879_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 588.0
PJS3_k127_3309879_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 558.0
PJS3_k127_3309879_2 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 370.0
PJS3_k127_3309879_3 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000009873 216.0
PJS3_k127_3309879_4 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000006061 194.0
PJS3_k127_3309879_5 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000001229 185.0
PJS3_k127_3315314_0 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006484 533.0
PJS3_k127_3315314_1 5-aminolevulinic acid synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 359.0
PJS3_k127_3315314_2 Polyamine ABC trasnporter, periplasmic polyamine-binding protein K02055 - - 0.0000000000000000000000000000000000000000000000000000000000000000001621 231.0
PJS3_k127_3329444_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.81e-280 869.0
PJS3_k127_3329444_1 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006592 452.0
PJS3_k127_3329444_10 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009459 311.0
PJS3_k127_3329444_11 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 307.0
PJS3_k127_3329444_12 Bacterial regulatory helix-turn-helix protein, lysR family K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005468 302.0
PJS3_k127_3329444_13 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006038 286.0
PJS3_k127_3329444_14 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000123 280.0
PJS3_k127_3329444_15 Chaperonin 10 Kd subunit - - - 0.0000000000000000000000000000000000000000000002426 168.0
PJS3_k127_3329444_16 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000004574 123.0
PJS3_k127_3329444_17 Protein of unknown function (DUF1499) - - - 0.000000000002328 72.0
PJS3_k127_3329444_2 GlcNAc-PI de-N-acetylase K16515 - 4.2.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 432.0
PJS3_k127_3329444_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K16066 - 1.1.1.381 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005273 369.0
PJS3_k127_3329444_4 PrpF protein K16514 - 5.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 363.0
PJS3_k127_3329444_5 Aldolase/RraA K02553,K10218 - 4.1.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 353.0
PJS3_k127_3329444_6 hydrolase, TatD family' K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 350.0
PJS3_k127_3329444_7 DNA polymerase III subunit delta K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 348.0
PJS3_k127_3329444_8 COG2951 Membrane-bound lytic murein transglycosylase B K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 328.0
PJS3_k127_3329444_9 PFAM MazG nucleotide pyrophosphohydrolase K04765 - 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 315.0
PJS3_k127_3345415_0 Integrase core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 612.0
PJS3_k127_3345415_1 L COG1484 DNA replication protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 382.0
PJS3_k127_33491_0 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 6.104e-236 738.0
PJS3_k127_33491_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 609.0
PJS3_k127_33491_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 541.0
PJS3_k127_33491_3 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 517.0
PJS3_k127_33491_4 ISXO2-like transposase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 396.0
PJS3_k127_33491_5 COG4665 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 312.0
PJS3_k127_33491_6 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004835 269.0
PJS3_k127_33491_8 Antibiotic biosynthesis monooxygenase - - - 0.0000000000001622 74.0
PJS3_k127_3383682_0 COG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit K13796 - - 6.959e-220 689.0
PJS3_k127_3383682_1 COG0520 Selenocysteine lyase - - - 4.394e-196 623.0
PJS3_k127_3383682_2 Isocitrate/isopropylmalate dehydrogenase K00031,K00052,K07246 GO:0006082,GO:0006575,GO:0006732,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016053,GO:0019297,GO:0019298,GO:0019752,GO:0032787,GO:0042398,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576 1.1.1.42,1.1.1.83,1.1.1.85,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 443.0
PJS3_k127_3383682_3 TIGRFAM CitB domain protein K13795 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 412.0
PJS3_k127_3383682_4 COG0747 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005992 288.0
PJS3_k127_3383682_5 Pfam:AmoA K07120 - - 0.0000000000000000000000000000000000000000000000000000000000000000002223 238.0
PJS3_k127_338436_0 HELICc2 K03722 - 3.6.4.12 0.0 1129.0
PJS3_k127_338436_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.612e-268 843.0
PJS3_k127_338436_10 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.000000000000000000000000000000000000000000000000000000000000000000006531 240.0
PJS3_k127_338436_11 COG0314 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000000000000000001251 229.0
PJS3_k127_338436_12 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.000000000000000000000000000000000000000000000000000378 190.0
PJS3_k127_338436_13 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000001494 183.0
PJS3_k127_338436_14 'TIGRFAM RNA polymerase sigma factor, sigma-70 family' K03088 - - 0.0000000000000000000000000000000000000000000002301 175.0
PJS3_k127_338436_15 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.0000000000000000000000000003298 119.0
PJS3_k127_338436_17 Heavy-metal resistance K06006 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0008150,GO:0009987,GO:0010033,GO:0014070,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0044464,GO:0050896,GO:0051082,GO:0061077,GO:1990507 - 0.000008735 54.0
PJS3_k127_338436_2 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 8.626e-262 815.0
PJS3_k127_338436_3 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 551.0
PJS3_k127_338436_4 COG0303 Molybdopterin biosynthesis enzyme K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 530.0
PJS3_k127_338436_5 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 412.0
PJS3_k127_338436_6 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 399.0
PJS3_k127_338436_7 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 365.0
PJS3_k127_338436_8 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005982 359.0
PJS3_k127_338436_9 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 314.0
PJS3_k127_339322_0 PFAM Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002911 463.0
PJS3_k127_339322_1 Trimethylamine methyltransferase (MTTB) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004119 396.0
PJS3_k127_339322_2 Transcriptional - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005075 282.0
PJS3_k127_339322_3 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005638 271.0
PJS3_k127_339322_4 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000005736 218.0
PJS3_k127_339322_5 COG1734 DnaK suppressor protein K06204 - - 0.0000000000000000004082 93.0
PJS3_k127_3394120_0 Belongs to the GcvT family K00315 - 1.5.8.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007005 310.0
PJS3_k127_3394120_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 298.0
PJS3_k127_3394120_2 Polyphosphate kinase 2 (PPK2) K22468 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008976,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0044237 2.7.4.1 0.0000000000000007643 78.0
PJS3_k127_3400454_0 COG3119 Arylsulfatase A and related enzymes K01133 - 3.1.6.6 4.907e-277 858.0
PJS3_k127_3400454_1 Belongs to the 5'-nucleotidase family K17224 - - 3.237e-269 838.0
PJS3_k127_3400454_2 Mo-co oxidoreductase dimerisation domain K17225 - - 9.512e-219 685.0
PJS3_k127_3400454_3 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008885 411.0
PJS3_k127_3400454_4 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005623,GO:0006091,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009055,GO:0009987,GO:0016491,GO:0016667,GO:0016669,GO:0016740,GO:0016782,GO:0016783,GO:0018192,GO:0018193,GO:0018198,GO:0018307,GO:0019417,GO:0019418,GO:0019538,GO:0020037,GO:0022900,GO:0032991,GO:0036211,GO:0042597,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046872,GO:0046906,GO:0046914,GO:0046982,GO:0046983,GO:0048037,GO:0055114,GO:0070069,GO:0071704,GO:0097159,GO:0098822,GO:1901363,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 313.0
PJS3_k127_3400454_5 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003745 280.0
PJS3_k127_3400454_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001511 255.0
PJS3_k127_3400454_7 Sulfur oxidation protein SoxY K17226 - - 0.000000000000000000000000000000000000000000000009762 175.0
PJS3_k127_3400454_8 cytochrome c K17223 - - 0.0000000000000000000000000000000000000000000006862 171.0
PJS3_k127_3400454_9 oxidation protein K17227 - - 0.0000000000000000000000000000000000000000000008542 167.0
PJS3_k127_3413889_0 C-terminal, D2-small domain, of ClpB protein K03694 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 - 8.906e-198 623.0
PJS3_k127_3413889_1 Belongs to the peptidase S11 family K01286 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 371.0
PJS3_k127_3413889_2 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000000000000000576 192.0
PJS3_k127_3413889_3 Phasin protein - - - 0.0000000000000000000000000000000000000000000000016 179.0
PJS3_k127_3413889_4 GNAT family acetyltransferase - - - 0.0000000000000000000000000000000000000000000001453 174.0
PJS3_k127_3413889_5 phosphomannomutase K01840 - 5.4.2.8 0.000000000000000001054 86.0
PJS3_k127_3431991_0 Cytochrome c-type biogenesis protein K02198 - - 1.515e-303 947.0
PJS3_k127_3431991_1 Periplasmic binding protein K01999 - - 6.195e-200 631.0
PJS3_k127_3431991_10 AhpC/TSA family K02199 - - 0.000000000000000000000000000000000000000000000000000000000000002906 223.0
PJS3_k127_3431991_11 Bacterial periplasmic substrate-binding proteins K02030,K10022 - - 0.00000000000000000000000000000000000000000000000000000000004568 210.0
PJS3_k127_3431991_12 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 GO:0003674,GO:0003824,GO:0008150,GO:0009987,GO:0016043,GO:0017004,GO:0022607,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840 - 0.0000000000000000000000000000000000000000000000754 175.0
PJS3_k127_3431991_13 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000000000000002843 174.0
PJS3_k127_3431991_14 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.00000009365 57.0
PJS3_k127_3431991_15 Protein of unknown function (DUF3108) - - - 0.0000003129 61.0
PJS3_k127_3431991_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007517 548.0
PJS3_k127_3431991_3 COG1541 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009541 497.0
PJS3_k127_3431991_4 branched-chain amino acid K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 467.0
PJS3_k127_3431991_5 G COG1172 Ribose xylose arabinose galactoside ABC-type transport systems, permease components K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 408.0
PJS3_k127_3431991_6 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 399.0
PJS3_k127_3431991_7 AAA domain, putative AbiEii toxin, Type IV TA system K02028,K10021,K10025 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006855 383.0
PJS3_k127_3431991_8 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001569 269.0
PJS3_k127_3431991_9 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000000001522 235.0
PJS3_k127_3433761_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 8.292e-230 720.0
PJS3_k127_3433761_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.006e-207 649.0
PJS3_k127_3433761_10 KR domain - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0008150,GO:0008152,GO:0009056,GO:0016491,GO:0044464,GO:0055114,GO:0071704,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 296.0
PJS3_k127_3433761_11 membrane protein, required for colicin V production K03558 - - 0.000000000000000000000000000000000000000000000000007476 190.0
PJS3_k127_3433761_12 Tetratricopeptide repeat-like domain - - - 0.000000000000000000000000000000000002731 149.0
PJS3_k127_3433761_13 Protein of unknown function (DUF2794) - - - 0.000000000000000000000009157 104.0
PJS3_k127_3433761_14 Protein of unknown function (DUF2937) - - - 0.00000000000000000125 93.0
PJS3_k127_3433761_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 4.583e-200 636.0
PJS3_k127_3433761_3 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000617 619.0
PJS3_k127_3433761_4 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007247 582.0
PJS3_k127_3433761_5 COG2230 Cyclopropane fatty acid synthase and related methyltransferases K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004959 514.0
PJS3_k127_3433761_6 COG1520 FOG WD40-like repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 442.0
PJS3_k127_3433761_7 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006568 421.0
PJS3_k127_3433761_8 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 385.0
PJS3_k127_3433761_9 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 374.0
PJS3_k127_3465602_0 malic enzyme K00029 - 1.1.1.40 0.0 1144.0
PJS3_k127_3465602_1 This protein is involved in the repair of mismatches in DNA K03555 - - 0.0 1091.0
PJS3_k127_3465602_2 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004242 480.0
PJS3_k127_3465602_3 signal transduction histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 418.0
PJS3_k127_3465602_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000003437 111.0
PJS3_k127_3474505_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916 - 6.3.1.5 1.12e-238 749.0
PJS3_k127_3474505_1 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 4.822e-238 743.0
PJS3_k127_3474505_2 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009483 573.0
PJS3_k127_3474505_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 507.0
PJS3_k127_3474505_4 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 399.0
PJS3_k127_3474505_5 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000164 202.0
PJS3_k127_3490550_0 PFAM integrase family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009986 346.0
PJS3_k127_3490550_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000002309 98.0
PJS3_k127_3512551_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1700.0
PJS3_k127_3512551_1 Belongs to the CarA family K01956 - 6.3.5.5 7.386e-195 616.0
PJS3_k127_3512551_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004859 597.0
PJS3_k127_3512551_3 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000000000000003043 189.0
PJS3_k127_3512551_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000002352 100.0
PJS3_k127_3529184_0 NADH flavin oxidoreductase NADH oxidase K21833 - - 0.0 1013.0
PJS3_k127_3529184_1 NADH:flavin oxidoreductase / NADH oxidase family - - - 1.998e-285 893.0
PJS3_k127_3529184_10 COG2199 FOG GGDEF domain - - - 0.000000000000000000000000000000000000002933 153.0
PJS3_k127_3529184_11 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000007541 129.0
PJS3_k127_3529184_12 Cold shock protein domain K03704 - - 0.00000000000000000000000000154 112.0
PJS3_k127_3529184_13 - - - - 0.0000000000000000000001166 102.0
PJS3_k127_3529184_14 Protein conserved in bacteria - - - 0.0000000000000008016 81.0
PJS3_k127_3529184_2 ATPase with chaperone activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 441.0
PJS3_k127_3529184_3 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 432.0
PJS3_k127_3529184_4 HD phosphohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 301.0
PJS3_k127_3529184_5 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 299.0
PJS3_k127_3529184_6 COG5598 Trimethylamine corrinoid methyltransferase K14083 - 2.1.1.250 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 293.0
PJS3_k127_3529184_7 dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003273 293.0
PJS3_k127_3529184_8 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001883 259.0
PJS3_k127_3529184_9 GtrA-like protein - - - 0.00000000000000000000000000000000000000001769 157.0
PJS3_k127_3532427_0 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000003205 201.0
PJS3_k127_3532427_1 Type III secretion system lipoprotein chaperone (YscW) K09914 - - 0.00000000000000000000000000000000000000003528 163.0
PJS3_k127_3532427_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000003834 138.0
PJS3_k127_3540237_0 Polyphosphate kinase 2 (PPK2) K22468 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008976,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0044237 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 442.0
PJS3_k127_3540237_1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 302.0
PJS3_k127_3572438_0 Amino acid kinase family K00928 - 2.7.2.4 3.569e-199 635.0
PJS3_k127_3572438_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 583.0
PJS3_k127_3572438_10 Haem-degrading - - - 0.0000000000000000000000000000000000000000000774 165.0
PJS3_k127_3572438_11 - K09004 - - 0.000000000000000000000000000000000000000272 155.0
PJS3_k127_3572438_12 Regulatory protein SoxS - - - 0.000000000000000000000000000000000003927 141.0
PJS3_k127_3572438_13 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000000003712 134.0
PJS3_k127_3572438_14 PFAM regulatory protein ArsR - GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000003545 128.0
PJS3_k127_3572438_15 - - - - 0.00000000000009037 82.0
PJS3_k127_3572438_2 Belongs to the ABC transporter superfamily K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007109 510.0
PJS3_k127_3572438_3 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 306.0
PJS3_k127_3572438_4 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 286.0
PJS3_k127_3572438_5 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004135 242.0
PJS3_k127_3572438_6 Thioredoxin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003363 242.0
PJS3_k127_3572438_7 Acetyltransferase (GNAT) family K06718 - 2.3.1.178 0.0000000000000000000000000000000000000000000000000000000000000000006061 233.0
PJS3_k127_3572438_8 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.0000000000000000000000000000000000000000000000000000000000002288 214.0
PJS3_k127_3572438_9 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000000000000000000000000000000000000000005286 201.0
PJS3_k127_3587202_0 Cysteine-rich domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 564.0
PJS3_k127_3587202_1 Predicted integral membrane protein (DUF2189) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 327.0
PJS3_k127_3587202_2 Protein of unknown function (DUF3501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001833 264.0
PJS3_k127_3587202_3 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000001114 203.0
PJS3_k127_3587202_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000001593 55.0
PJS3_k127_3594762_0 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 534.0
PJS3_k127_3594762_1 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004475 432.0
PJS3_k127_3594762_2 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005883 317.0
PJS3_k127_3594762_3 transcriptional regulator K07736 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006914 254.0
PJS3_k127_3594762_4 Protein of unknown function (DUF938) - - - 0.00000000000000000000000000000000000000000000000000000000000000000003101 238.0
PJS3_k127_3594762_5 Staphylococcal nuclease homologue - - - 0.0000000000000000000000000000000000000000000000000000000000000000009547 250.0
PJS3_k127_3594762_6 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000000000000000000000002196 213.0
PJS3_k127_3594762_7 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000000000003511 154.0
PJS3_k127_3594762_8 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.00000000004451 64.0
PJS3_k127_3623754_0 Sugar (and other) transporter - - - 3.155e-232 722.0
PJS3_k127_3623754_1 IstB-like ATP binding protein - - - 0.0000000000000000000000000000008053 122.0
PJS3_k127_364200_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1575.0
PJS3_k127_364200_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 5.667e-212 665.0
PJS3_k127_364200_2 Adenylate cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000798 269.0
PJS3_k127_364200_3 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000000000000000009965 222.0
PJS3_k127_364200_4 Acetyltransferase (GNAT) domain K02348 - - 0.00000000000000000000000000000000009896 142.0
PJS3_k127_364200_5 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.00000000005319 63.0
PJS3_k127_3722989_0 COG3335 Transposase and inactivated derivatives - - - 2.277e-196 616.0
PJS3_k127_3722989_1 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.000000000000421 70.0
PJS3_k127_3723682_0 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009995 256.0
PJS3_k127_3723682_1 LexA-binding, inner membrane-associated putative hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000007568 225.0
PJS3_k127_3770835_0 UDP binding domain K02474 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 449.0
PJS3_k127_3770835_1 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000008789 203.0
PJS3_k127_3907302_0 COG2873 O-acetylhomoserine sulfhydrylase K01740 - 2.5.1.49 6.471e-226 706.0
PJS3_k127_3907302_1 Acyl-CoA dehydrogenase, N-terminal domain K00252 - 1.3.8.6 8.068e-216 675.0
PJS3_k127_3907302_10 Formate nitrite K06212 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 292.0
PJS3_k127_3907302_11 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001148 268.0
PJS3_k127_3907302_12 Iron-containing alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002078 273.0
PJS3_k127_3907302_13 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000006133 215.0
PJS3_k127_3907302_14 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000001032 199.0
PJS3_k127_3907302_15 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000002106 190.0
PJS3_k127_3907302_16 COG1846 Transcriptional regulators - - - 0.000000000000000000000000000000000000000000002586 169.0
PJS3_k127_3907302_17 effector of murein hydrolase LrgA K06518 - - 0.0000000000000000000000000000000000007225 143.0
PJS3_k127_3907302_18 Helix-turn-helix domain - - - 0.0000000000000000000000001871 109.0
PJS3_k127_3907302_19 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.1.2.1 0.000000002291 59.0
PJS3_k127_3907302_2 COG1960 Acyl-CoA dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 585.0
PJS3_k127_3907302_3 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 482.0
PJS3_k127_3907302_4 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 437.0
PJS3_k127_3907302_5 Malonyl-CoA decarboxylase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005258 434.0
PJS3_k127_3907302_6 Enoyl-CoA hydratase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007207 415.0
PJS3_k127_3907302_7 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003129 375.0
PJS3_k127_3907302_8 effector of murein hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003891 336.0
PJS3_k127_3907302_9 alpha/beta hydrolase fold K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006471 319.0
PJS3_k127_3914105_0 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 2.403e-301 929.0
PJS3_k127_3914105_1 Resolvase K06400 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 612.0
PJS3_k127_3914105_2 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 511.0
PJS3_k127_3914105_3 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 477.0
PJS3_k127_3914105_4 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 293.0
PJS3_k127_3914105_5 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000003316 266.0
PJS3_k127_3914105_6 PFAM integrase family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002633 249.0
PJS3_k127_3914105_7 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.0000000000000000000000000000000001959 136.0
PJS3_k127_3914105_8 Protein of unknown function (DUF2924) - - - 0.0000000000000000000000000000000002208 136.0
PJS3_k127_3914105_9 - - - - 0.0001086 45.0
PJS3_k127_3924383_0 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 565.0
PJS3_k127_3924383_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005812 341.0
PJS3_k127_3924383_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008487 260.0
PJS3_k127_3924383_3 lipopolysaccharide core region biosynthetic process - - - 0.00000000000000000000000000000000000000000000004719 181.0
PJS3_k127_3924383_4 ubiE/COQ5 methyltransferase family - - - 0.000000005146 66.0
PJS3_k127_3928932_0 DDE superfamily endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007056 542.0
PJS3_k127_3928932_1 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000009216 153.0
PJS3_k127_3936868_0 Flavin containing amine oxidoreductase - - - 4.939e-212 671.0
PJS3_k127_3936868_1 CoA binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 561.0
PJS3_k127_3936868_2 COG0687 Spermidine putrescine-binding periplasmic protein K11069 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 519.0
PJS3_k127_3936868_3 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 516.0
PJS3_k127_3936868_4 COG0436 Aspartate tyrosine aromatic aminotransferase K00812,K12252 - 2.6.1.1,2.6.1.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 496.0
PJS3_k127_3936868_5 Domain of unknown function (DUF1989) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 376.0
PJS3_k127_3936868_6 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 318.0
PJS3_k127_3936868_7 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000173 223.0
PJS3_k127_3957042_0 penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 400.0
PJS3_k127_3957042_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000002345 221.0
PJS3_k127_3957042_2 Hemimethylated DNA-binding protein YccV like K11940 - - 0.00000000000000000000000000000000000000000000006752 171.0
PJS3_k127_3989774_0 Domain of unknown function (DUF3390) K18929 - - 4.958e-227 711.0
PJS3_k127_3989774_1 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006649 543.0
PJS3_k127_3989774_10 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000001454 150.0
PJS3_k127_3989774_11 COG3030 Protein affecting phage T7 exclusion by the F plasmid K07113 - - 0.000000000000000000000004483 108.0
PJS3_k127_3989774_12 Maf-like protein K06287 - - 0.000000009564 56.0
PJS3_k127_3989774_2 membrane-bound lytic murein transglycosylase K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 400.0
PJS3_k127_3989774_3 Cysteine-rich domain K18928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002995 383.0
PJS3_k127_3989774_4 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 381.0
PJS3_k127_3989774_5 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 311.0
PJS3_k127_3989774_6 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000000000000000000000000002059 242.0
PJS3_k127_3989774_7 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000442 236.0
PJS3_k127_3989774_8 Belongs to the phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000000003546 202.0
PJS3_k127_3989774_9 LUD domain K00782 - - 0.0000000000000000000000000000000000000000000000000000002755 220.0
PJS3_k127_3990030_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2029.0
PJS3_k127_3990030_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1160.0
PJS3_k127_3990030_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006338 262.0
PJS3_k127_3990030_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001178 245.0
PJS3_k127_3990030_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000003 161.0
PJS3_k127_4017906_0 Domain of unknown function (DUF4445) - - - 8.378e-320 989.0
PJS3_k127_4017906_1 Trimethylamine methyltransferase (MTTB) - - - 7.613e-255 795.0
PJS3_k127_4017906_10 Protein of unknown function (DUF1638) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005773 260.0
PJS3_k127_4017906_11 COG1145 Ferredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003367 258.0
PJS3_k127_4017906_12 2-hydroxychromene-2-carboxylate isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000002743 226.0
PJS3_k127_4017906_13 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000001171 226.0
PJS3_k127_4017906_14 LysE type translocator - - - 0.0000000000000000000000000000000000000005021 160.0
PJS3_k127_4017906_15 Virulence factor - - - 0.0000000000000000000000000000000008945 137.0
PJS3_k127_4017906_2 COG1960 Acyl-CoA dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 576.0
PJS3_k127_4017906_3 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 501.0
PJS3_k127_4017906_4 CO dehydrogenase/acetyl-CoA synthase delta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 456.0
PJS3_k127_4017906_5 COG0685 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 452.0
PJS3_k127_4017906_6 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 406.0
PJS3_k127_4017906_7 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00651 - 2.3.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005006 393.0
PJS3_k127_4017906_8 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K21826 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 362.0
PJS3_k127_4017906_9 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001895 280.0
PJS3_k127_4071752_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1212.0
PJS3_k127_4071752_1 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 336.0
PJS3_k127_4071752_2 Protein of unknown function (DUF3035) - - - 0.0000000000000000000000000000000000000001084 161.0
PJS3_k127_4071752_3 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000002896 147.0
PJS3_k127_4079842_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 595.0
PJS3_k127_4079842_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 526.0
PJS3_k127_4079842_2 AFG1-like ATPase K06916 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 476.0
PJS3_k127_4079842_3 nitrite reductase [NAD(P)H] activity K15762 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 438.0
PJS3_k127_4079842_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 294.0
PJS3_k127_4079842_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000001579 242.0
PJS3_k127_4079842_6 OmpW family K07275 - - 0.0000000000000000000000000000000000000000000000000000000000001965 219.0
PJS3_k127_4079842_7 membrane - - - 0.000000000000000000000000000000000000002066 150.0
PJS3_k127_4079842_8 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000002174 88.0
PJS3_k127_4107325_0 IstB-like ATP binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 398.0
PJS3_k127_4107325_1 COG4584 Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001111 250.0
PJS3_k127_4107325_2 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000379 186.0
PJS3_k127_4139147_0 Alpha/beta hydrolase family K01561 - 3.8.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009008 425.0
PJS3_k127_4139147_1 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005754 322.0
PJS3_k127_4139147_2 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 298.0
PJS3_k127_4139147_3 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000000000000000000000000000007707 217.0
PJS3_k127_4139147_4 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000000000000000000000000000000007361 214.0
PJS3_k127_4139147_5 FecR protein - - - 0.000000000000000000000000000000962 132.0
PJS3_k127_4171368_0 Dehydrogenase K15371 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0008150,GO:0008152,GO:0016491,GO:0016638,GO:0016639,GO:0055114 1.4.1.2 0.0 1964.0
PJS3_k127_4171368_1 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 0.0 1009.0
PJS3_k127_4171368_10 of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000492 330.0
PJS3_k127_4171368_11 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 326.0
PJS3_k127_4171368_12 COG0451 Nucleoside-diphosphate-sugar epimerases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007985 315.0
PJS3_k127_4171368_13 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009334 284.0
PJS3_k127_4171368_14 with different specificities (related to short-chain alcohol K00034 - 1.1.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000002955 266.0
PJS3_k127_4171368_15 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000001145 252.0
PJS3_k127_4171368_16 Protein of unknown function (DUF1194) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001185 253.0
PJS3_k127_4171368_17 Tripartite ATP-independent periplasmic transporters, DctQ component K11689 - - 0.0000000000000000000000000000000000000000000000000000000000000000004072 236.0
PJS3_k127_4171368_18 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000006612 220.0
PJS3_k127_4171368_19 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 - - 0.0000000000000000000000000000000000000000000000000000005321 196.0
PJS3_k127_4171368_2 GTP-binding protein TypA K06207 - - 3.468e-283 881.0
PJS3_k127_4171368_20 Integral membrane protein (DUF2244) - - - 0.000000000000000000000000000000000000000000000000000003418 197.0
PJS3_k127_4171368_21 Etoposide-induced protein 2.4 (EI24) - - - 0.00000000000000000000000000000000000000000000000006827 187.0
PJS3_k127_4171368_22 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000000000193 179.0
PJS3_k127_4171368_23 Domain of unknown function (DUF4336) - - - 0.00000000000000000000000000000000000000000001341 184.0
PJS3_k127_4171368_24 Succinate dehydrogenase, hydrophobic anchor subunit K00242 - - 0.0000000000000000000000000000000000000001089 154.0
PJS3_k127_4171368_25 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000003845 151.0
PJS3_k127_4171368_26 Polymer-forming cytoskeletal - - - 0.0000000000000000000000001909 114.0
PJS3_k127_4171368_27 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0000000000000000000009691 96.0
PJS3_k127_4171368_28 - - - - 0.000000001533 68.0
PJS3_k127_4171368_3 Trap dicarboxylate transporter-dctm subunit K11690 GO:0005575,GO:0016020,GO:0016021,GO:0031224,GO:0044425 - 4.298e-221 692.0
PJS3_k127_4171368_4 Acetyl-coenzyme A transporter 1 K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 505.0
PJS3_k127_4171368_5 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 474.0
PJS3_k127_4171368_6 COG0524 Sugar kinases, ribokinase family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 461.0
PJS3_k127_4171368_7 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 442.0
PJS3_k127_4171368_8 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 443.0
PJS3_k127_4171368_9 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0008150,GO:0015711,GO:0015740,GO:0015849,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0046942,GO:0051179,GO:0051234,GO:0071702 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009927 355.0
PJS3_k127_4174062_0 Methylmalonyl-CoA mutase K14447 - 5.4.99.63 0.0 1011.0
PJS3_k127_4174062_1 COG1960 Acyl-CoA dehydrogenases K14448 - 1.3.8.12 5.412e-270 840.0
PJS3_k127_4174062_10 Dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000948 471.0
PJS3_k127_4174062_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 487.0
PJS3_k127_4174062_12 ornithine cyclodeaminase K01750 - 4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 440.0
PJS3_k127_4174062_13 Ectoine utilization K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 414.0
PJS3_k127_4174062_14 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003867 404.0
PJS3_k127_4174062_15 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000006836 265.0
PJS3_k127_4174062_16 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000002714 264.0
PJS3_k127_4174062_17 helix_turn_helix ASNC type K15782 - - 0.000000000000000000000000000000000000000000000000000000000001465 216.0
PJS3_k127_4174062_18 SapC - - - 0.0000000000000000000000000000000000000000000007115 175.0
PJS3_k127_4174062_19 Transporter Component K07112 - - 0.000000000000000000000000000000000000000000001674 168.0
PJS3_k127_4174062_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K15785 - 2.6.1.76 9.548e-253 785.0
PJS3_k127_4174062_20 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000001351 171.0
PJS3_k127_4174062_21 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000006869 162.0
PJS3_k127_4174062_22 transporter component K07112 - - 0.000000000000000000000000000000000000000006952 158.0
PJS3_k127_4174062_23 Cation efflux family - - - 0.00000000000000000000000000000000000000001009 157.0
PJS3_k127_4174062_24 Transcriptional regulator - - - 0.0000000000000000000000000000000000002925 142.0
PJS3_k127_4174062_25 Protein of unknown function (DUF3892) - - - 0.000000000000000000000006686 103.0
PJS3_k127_4174062_26 zinc-ribbon domain - - - 0.00000000000000007956 91.0
PJS3_k127_4174062_27 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.0000000000000001646 88.0
PJS3_k127_4174062_28 Glycosyltransferase family 87 - - - 0.0000000000000002197 92.0
PJS3_k127_4174062_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00001,K14446 - 1.1.1.1,1.3.1.85 2.222e-242 753.0
PJS3_k127_4174062_30 Hypoxia induced protein conserved region - - - 0.0000000004347 63.0
PJS3_k127_4174062_4 argininosuccinate lyase K01755 - 4.3.2.1 9.784e-214 674.0
PJS3_k127_4174062_5 COG0006 Xaa-Pro aminopeptidase K01271,K15783 - 3.4.13.9,3.5.4.44 2.619e-206 647.0
PJS3_k127_4174062_6 Aldehyde dehydrogenase family K15786 - - 1.841e-202 642.0
PJS3_k127_4174062_7 Domain of unknown function (DUF4175) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 578.0
PJS3_k127_4174062_8 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006024 492.0
PJS3_k127_4174062_9 Succinylglutamate desuccinylase / Aspartoacylase family K15784 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0032787,GO:0042399,GO:0042400,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0046483,GO:0046700,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.1.125 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006789 483.0
PJS3_k127_4174937_0 FAD dependent oxidoreductase K09471 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005464 511.0
PJS3_k127_4207727_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 1.544e-256 802.0
PJS3_k127_4207727_1 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 388.0
PJS3_k127_4207727_10 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.0000000000000000000000000000002585 126.0
PJS3_k127_4207727_11 iron-sulfur cluster assembly K19168 - - 0.000000000000000000001088 99.0
PJS3_k127_4207727_12 Lipopolysaccharide-assembly K03643 - - 0.00000000000000000001713 95.0
PJS3_k127_4207727_13 Phospholipid N-methyltransferase K00570 - 2.1.1.17,2.1.1.71 0.0000000001346 70.0
PJS3_k127_4207727_2 ATPases associated with a variety of cellular activities K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 345.0
PJS3_k127_4207727_3 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 344.0
PJS3_k127_4207727_4 Transcriptional regulator, LysR family K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003056 274.0
PJS3_k127_4207727_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005729 258.0
PJS3_k127_4207727_6 Secreted protein - - - 0.00000000000000000000000000000000000000000000000000000006626 216.0
PJS3_k127_4207727_7 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067,K06192 - - 0.000000000000000000000000000000000000000000000001045 191.0
PJS3_k127_4207727_8 transport system auxiliary component K18480 - - 0.000000000000000000000000000000000000000000000001152 182.0
PJS3_k127_4207727_9 PFAM DoxX family protein K15977 - - 0.00000000000000000000000000000000000000000000006509 172.0
PJS3_k127_4217353_0 TRAP transporter, 4TM 12TM fusion protein - - - 0.0 1231.0
PJS3_k127_4217353_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 7.211e-220 690.0
PJS3_k127_4217353_10 beta-keto acid cleavage enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 309.0
PJS3_k127_4217353_11 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003046 253.0
PJS3_k127_4217353_12 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000181 256.0
PJS3_k127_4217353_13 Stringent starvation protein B K09985 - - 0.0000000000000000000000000000000000000000000000001839 183.0
PJS3_k127_4217353_14 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000000000000000000000000000000000000002288 174.0
PJS3_k127_4217353_15 protein involved in outer membrane biogenesis K07289 - - 0.00000000000000002034 91.0
PJS3_k127_4217353_16 protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis - - - 0.000000000000009422 78.0
PJS3_k127_4217353_17 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000000000447 67.0
PJS3_k127_4217353_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 2.397e-203 641.0
PJS3_k127_4217353_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 594.0
PJS3_k127_4217353_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 527.0
PJS3_k127_4217353_5 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 491.0
PJS3_k127_4217353_6 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008986 476.0
PJS3_k127_4217353_7 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007694 469.0
PJS3_k127_4217353_8 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 331.0
PJS3_k127_4217353_9 Sulfatase-modifying factor enzyme 1 K20333 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 312.0
PJS3_k127_4232669_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 340.0
PJS3_k127_4232669_1 Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000000000000000004717 205.0
PJS3_k127_4262483_0 penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 443.0
PJS3_k127_4262483_1 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000008749 136.0
PJS3_k127_427566_0 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003975 471.0
PJS3_k127_427566_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 447.0
PJS3_k127_427566_10 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.0005817 44.0
PJS3_k127_427566_2 Competence protein K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008961 408.0
PJS3_k127_427566_3 Belongs to the TrpC family K01609 - 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 371.0
PJS3_k127_427566_4 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 313.0
PJS3_k127_427566_5 COG0512 Anthranilate para-aminobenzoate synthases component II K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 300.0
PJS3_k127_427566_6 protein conserved in bacteria K09798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007002 258.0
PJS3_k127_427566_7 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000001597 244.0
PJS3_k127_427566_8 helix_turn_helix, mercury resistance K19591 - - 0.0000000000000000000000000000000000000000000000002128 181.0
PJS3_k127_427566_9 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000005067 98.0
PJS3_k127_4275752_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 3.844e-228 712.0
PJS3_k127_4275752_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 514.0
PJS3_k127_4275752_2 Binding-protein-dependent transport system inner membrane component K02042 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 428.0
PJS3_k127_4275752_3 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 419.0
PJS3_k127_4275752_4 COG3639 ABC-type phosphate phosphonate transport system, permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 417.0
PJS3_k127_4275752_5 sugar phosphatases of the HAD superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001439 281.0
PJS3_k127_4275752_6 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.00000000000000003682 86.0
PJS3_k127_4275752_7 EamA-like transporter family - - - 0.000000000435 66.0
PJS3_k127_4278831_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 503.0
PJS3_k127_4278831_1 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000008745 134.0
PJS3_k127_4287109_0 Na H antiporter K03316 - - 1.708e-305 957.0
PJS3_k127_4287109_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 4.754e-271 856.0
PJS3_k127_4287109_10 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ) K00878 - 2.7.1.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001823 283.0
PJS3_k127_4287109_11 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001853 271.0
PJS3_k127_4287109_12 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000008053 194.0
PJS3_k127_4287109_13 conserved small protein - - - 0.00000000000000000000000000001607 119.0
PJS3_k127_4287109_14 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.00000000000000000000000000003991 123.0
PJS3_k127_4287109_15 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000000003763 94.0
PJS3_k127_4287109_2 COG0747 ABC-type dipeptide transport system, periplasmic component K02035 - - 7.024e-217 689.0
PJS3_k127_4287109_3 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007951 440.0
PJS3_k127_4287109_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009061 433.0
PJS3_k127_4287109_5 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 373.0
PJS3_k127_4287109_6 Cytochrome c, mono- and diheme variants - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005638 353.0
PJS3_k127_4287109_7 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005401 342.0
PJS3_k127_4287109_8 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 327.0
PJS3_k127_4287109_9 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 327.0
PJS3_k127_4327124_0 Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006644 387.0
PJS3_k127_4327124_1 COG1982 Arginine lysine ornithine decarboxylases K01584 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 334.0
PJS3_k127_4327124_2 COG0655 Multimeric flavodoxin WrbA - - - 0.00000000000000000000000000000000000000000000000000004186 188.0
PJS3_k127_4340395_0 glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006588 534.0
PJS3_k127_4340395_1 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 447.0
PJS3_k127_4340395_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 318.0
PJS3_k127_4340395_3 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 325.0
PJS3_k127_4340395_4 Methyltransferase small domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002585 250.0
PJS3_k127_4340395_5 COG0607 Rhodanese-related sulfurtransferase - - - 0.00000000000000000000000007076 113.0
PJS3_k127_4340395_6 Putative prokaryotic signal transducing protein - - - 0.0000000000000000001287 91.0
PJS3_k127_4340395_7 - - - - 0.000000000003827 70.0
PJS3_k127_437635_0 protein related to deoxyribodipyrimidine photolyase K06876 GO:0000166,GO:0000719,GO:0003674,GO:0003824,GO:0003913,GO:0003914,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006290,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0033554,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0071949,GO:0090304,GO:0097159,GO:0140097,GO:1901265,GO:1901360,GO:1901363 - 1.826e-211 670.0
PJS3_k127_437635_1 Flavin containing amine oxidoreductase K06954 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 484.0
PJS3_k127_437635_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000002129 217.0
PJS3_k127_437635_11 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000004954 209.0
PJS3_k127_437635_12 SnoaL-like domain - - - 0.0000000000000000000000005054 116.0
PJS3_k127_437635_13 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000006995 109.0
PJS3_k127_437635_14 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.000000000000000002709 95.0
PJS3_k127_437635_15 Peptidase A24A, prepilin type IV K02278 - 3.4.23.43 0.000000000000000009754 89.0
PJS3_k127_437635_16 PFAM glutathione S-transferase K00799 - 2.5.1.18 0.00000000004607 67.0
PJS3_k127_437635_17 Polymer-forming cytoskeletal - - - 0.0000000002551 67.0
PJS3_k127_437635_18 - - - - 0.0000000002801 66.0
PJS3_k127_437635_19 oxidoreductase FAD NAD(P)-binding domain protein K14581 - 1.18.1.7 0.0000000405 56.0
PJS3_k127_437635_2 COG2230 Cyclopropane fatty acid synthase and related methyltransferases K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 460.0
PJS3_k127_437635_3 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 462.0
PJS3_k127_437635_4 Protein of unknown function (DUF1365) K09701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 358.0
PJS3_k127_437635_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 342.0
PJS3_k127_437635_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 341.0
PJS3_k127_437635_7 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008927 271.0
PJS3_k127_437635_8 ChrR Cupin-like domain K07167 - - 0.0000000000000000000000000000000000000000000000000000000000000000002404 235.0
PJS3_k127_437635_9 Protein of unknown function (DUF3833) - - - 0.00000000000000000000000000000000000000000000000000000000000000005739 227.0
PJS3_k127_4528267_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 5.202e-264 824.0
PJS3_k127_4528267_1 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 430.0
PJS3_k127_4528267_10 Domain of unknown function (DUF1476) - - - 0.00000000000000000000000000000000000000003729 155.0
PJS3_k127_4528267_11 Belongs to the BolA IbaG family - - - 0.00000000000000000000000000000000000001689 145.0
PJS3_k127_4528267_12 Lactoylglutathione lyase and related lyases K01759 - 4.4.1.5 0.000000000000000000000001481 108.0
PJS3_k127_4528267_2 Belongs to the SAICAR synthetase family K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 416.0
PJS3_k127_4528267_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 337.0
PJS3_k127_4528267_4 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006875 316.0
PJS3_k127_4528267_5 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 312.0
PJS3_k127_4528267_6 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 300.0
PJS3_k127_4528267_7 Belongs to the SfsA family K06206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006326 282.0
PJS3_k127_4528267_8 Cupin superfamily K09705 - - 0.0000000000000000000000000000000000000000000000000000000001825 207.0
PJS3_k127_4528267_9 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000000000000000000008464 194.0
PJS3_k127_4546955_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 5.955e-217 679.0
PJS3_k127_4546955_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K02858,K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 554.0
PJS3_k127_4546955_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 438.0
PJS3_k127_4546955_3 Riboflavin synthase alpha chain K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001159 282.0
PJS3_k127_4546955_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000000000001987 230.0
PJS3_k127_4546955_5 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000009833 96.0
PJS3_k127_4555125_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2249.0
PJS3_k127_4555125_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005078 488.0
PJS3_k127_4555125_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000529 353.0
PJS3_k127_4555125_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 306.0
PJS3_k127_4555125_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001463 223.0
PJS3_k127_4555125_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001571 227.0
PJS3_k127_4555125_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000000000007431 183.0
PJS3_k127_4555125_7 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.00000000000000000000000000004183 116.0
PJS3_k127_4555125_8 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000000000001751 92.0
PJS3_k127_4555125_9 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000005825 62.0
PJS3_k127_4557962_0 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000000000001347 211.0
PJS3_k127_4557962_1 MFS/sugar transport protein - - - 0.0000000000000000000000000001055 121.0
PJS3_k127_4557962_2 oligosaccharyl transferase activity - - - 0.00000000000000006636 87.0
PJS3_k127_4562137_0 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 - 2.3.3.9 0.0 1025.0
PJS3_k127_4562137_1 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 380.0
PJS3_k127_4562137_2 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 320.0
PJS3_k127_4562137_3 Haemolysin-III related K11068 - - 0.0000000000000000000000000000000000000000000000000000000003829 208.0
PJS3_k127_4562137_4 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.000000000000000000000004738 108.0
PJS3_k127_4562137_5 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015098,GO:0015103,GO:0015318,GO:0015399,GO:0015405,GO:0015412,GO:0015689,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030151,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0034220,GO:0042597,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043169,GO:0043225,GO:0043492,GO:0044464,GO:0046872,GO:0046914,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0099133,GO:1901359 - 0.00000004304 55.0
PJS3_k127_4569788_0 Fumarate hydratase (Fumerase) K01676 GO:0003674,GO:0003824,GO:0004333,GO:0005488,GO:0005515,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016860,GO:0016862,GO:0016999,GO:0017144,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0048037,GO:0050163,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 3.439e-221 692.0
PJS3_k127_4569788_1 transport system, permease component K05778 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009452 604.0
PJS3_k127_4569788_2 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 581.0
PJS3_k127_4569788_3 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 536.0
PJS3_k127_4569788_4 transport system periplasmic component K05777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 521.0
PJS3_k127_4569788_5 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007284 394.0
PJS3_k127_4569788_6 glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000001045 235.0
PJS3_k127_4569788_7 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases K12972 - 1.1.1.79,1.1.1.81 0.000000000000000000003763 94.0
PJS3_k127_4569788_8 nuclease - - - 0.0000000000001512 77.0
PJS3_k127_4584984_0 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 433.0
PJS3_k127_4584984_1 cobalamin synthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 314.0
PJS3_k127_4584984_2 Usg-like family - - - 0.000000000000000000000000000002678 122.0
PJS3_k127_4597530_0 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000000000000000000000000000000000001871 213.0
PJS3_k127_4598198_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 3.988e-194 613.0
PJS3_k127_4598198_1 FAD dependent oxidoreductase K09471 - - 0.00000000000000000000000000000000000000000000000000000000000000006263 227.0
PJS3_k127_4598248_0 Winged helix DNA-binding domain K09927 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009384 460.0
PJS3_k127_4598248_1 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 390.0
PJS3_k127_4598248_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 373.0
PJS3_k127_4598248_3 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.00000000005378 67.0
PJS3_k127_460127_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 5.305e-208 657.0
PJS3_k127_460127_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006168 458.0
PJS3_k127_460127_2 COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 457.0
PJS3_k127_460127_3 Bacterial transcriptional regulator K10973,K13641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 329.0
PJS3_k127_4619860_0 Branched-chain amino acid transport system / permease component K01997,K01998,K11960 - - 2.058e-240 758.0
PJS3_k127_4619860_1 Periplasmic binding protein domain K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004753 557.0
PJS3_k127_4619860_10 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783,K03815 - 2.4.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 305.0
PJS3_k127_4619860_11 Protein of unknown function, DUF547 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000117 273.0
PJS3_k127_4619860_12 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.000000000000000000000000000000000000000000000000000001566 194.0
PJS3_k127_4619860_13 Bacterial-like globin K06886 - - 0.000000000000000000000000000001627 124.0
PJS3_k127_4619860_2 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 521.0
PJS3_k127_4619860_3 Peptidase family M20/M25/M40 K02083,K06016 - 3.5.1.6,3.5.1.87,3.5.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 487.0
PJS3_k127_4619860_4 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009106 411.0
PJS3_k127_4619860_5 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 343.0
PJS3_k127_4619860_6 Peroxiredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 323.0
PJS3_k127_4619860_7 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006502 332.0
PJS3_k127_4619860_8 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 315.0
PJS3_k127_4619860_9 Amidinotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006212 310.0
PJS3_k127_4625495_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0 1086.0
PJS3_k127_4625495_1 VWA domain containing CoxE-like protein K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 504.0
PJS3_k127_4625495_10 XdhC and CoxI family - - - 0.0000000000000000000000000000000000000000002692 162.0
PJS3_k127_4625495_11 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000002335 159.0
PJS3_k127_4625495_12 Protein of unknown function (DUF1318) - - - 0.0000000000000000000000000002156 117.0
PJS3_k127_4625495_13 XdhC Rossmann domain K07402 - - 0.0000000000000000000004263 100.0
PJS3_k127_4625495_14 YnbE-like lipoprotein - - - 0.000000000000000001705 88.0
PJS3_k127_4625495_2 AAA domain (dynein-related subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 477.0
PJS3_k127_4625495_3 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008018 375.0
PJS3_k127_4625495_4 COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 307.0
PJS3_k127_4625495_5 ABC transporter K15600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 295.0
PJS3_k127_4625495_6 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001791 275.0
PJS3_k127_4625495_7 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000002535 265.0
PJS3_k127_4625495_8 Carbon monoxide dehydrogenase subunit G (CoxG) K09386 - - 0.0000000000000000000000000000000000000000000000000000000000000000005119 238.0
PJS3_k127_4625495_9 Dicarboxylate transport - - - 0.00000000000000000000000000000000000000000006397 185.0
PJS3_k127_466514_0 Transposase (IS116 IS110 IS902 family) K07486 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004389 404.0
PJS3_k127_466514_1 Sodium/hydrogen exchanger family K03316 - - 0.00000000001938 64.0
PJS3_k127_4683279_0 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 400.0
PJS3_k127_4683279_1 Binding-protein-dependent transport system inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 312.0
PJS3_k127_4683279_2 PFAM Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 317.0
PJS3_k127_4683279_3 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004303 264.0
PJS3_k127_4683279_4 ATPases associated with a variety of cellular activities K06857 - 3.6.3.55 0.0000000000000000000000000000000000000000000000000000000000000000003736 238.0
PJS3_k127_4693570_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1034.0
PJS3_k127_4693570_1 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 520.0
PJS3_k127_4693570_10 Uncharacterized protein conserved in bacteria (DUF2066) - - - 0.0000000000000000000000000000000000000000000000000000000000005751 228.0
PJS3_k127_4693570_11 COG0593 ATPase involved in DNA replication initiation - - - 0.00000000000000000000000000000000000000000000000000000009959 216.0
PJS3_k127_4693570_12 Phosphohistidine phosphatase SixA K08296 - - 0.0000000000000000000000000000000000000000003901 163.0
PJS3_k127_4693570_13 Invasion associated locus B (IalB) protein - - - 0.00000000003266 66.0
PJS3_k127_4693570_2 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 487.0
PJS3_k127_4693570_3 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 481.0
PJS3_k127_4693570_4 CYTH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000544 447.0
PJS3_k127_4693570_5 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 383.0
PJS3_k127_4693570_6 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 368.0
PJS3_k127_4693570_7 permease K03548 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 367.0
PJS3_k127_4693570_8 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 313.0
PJS3_k127_4693570_9 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 287.0
PJS3_k127_4729675_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256 - 2.6.1.113 1.115e-206 652.0
PJS3_k127_4729675_1 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000000001561 112.0
PJS3_k127_4734335_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 8.03e-265 830.0
PJS3_k127_4734335_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 418.0
PJS3_k127_4734335_2 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009125 392.0
PJS3_k127_4734335_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 314.0
PJS3_k127_4734335_4 Glycosyl transferase group 2 family protein - - - 0.000000000000000000000000000000000000000000000000000000000004426 215.0
PJS3_k127_4734335_5 SelR domain K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000005454 209.0
PJS3_k127_4734335_6 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000004035 102.0
PJS3_k127_4734335_7 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.000000000000000245 82.0
PJS3_k127_4810373_0 COG0747 ABC-type dipeptide transport system, periplasmic component K02035 - - 2.891e-259 809.0
PJS3_k127_4810373_1 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 516.0
PJS3_k127_4810373_2 COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 491.0
PJS3_k127_4810373_3 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 355.0
PJS3_k127_4810373_4 decarboxylase K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000002555 233.0
PJS3_k127_4810373_5 aminopeptidase K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000002451 223.0
PJS3_k127_4847016_0 COG0488 ATPase components of ABC transporters with duplicated ATPase domains - - - 1.148e-294 910.0
PJS3_k127_4847016_1 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 441.0
PJS3_k127_4847016_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 417.0
PJS3_k127_4847016_3 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000000005754 178.0
PJS3_k127_4847016_4 Protein of unknown function (DUF2892) - - - 0.00000000000000000000006518 98.0
PJS3_k127_4847016_5 COGs COG0790 FOG TPR repeat SEL1 subfamily K07126 - - 0.00000000000000000005817 102.0
PJS3_k127_4847016_6 NAD binding domain of 6-phosphogluconate dehydrogenase - - - 0.00000000008112 68.0
PJS3_k127_4959619_0 Ion channel K10716 - - 0.000000000000000000000000000000000000000000000000000005965 194.0
PJS3_k127_4959619_1 - - - - 0.000000000000000000000000007197 113.0
PJS3_k127_4959619_2 Transposase IS200 like K07491 - - 0.000000000000000000000006778 102.0
PJS3_k127_4959619_3 COG1943 Transposase and inactivated derivatives K07491 - - 0.000000008217 56.0
PJS3_k127_5032011_0 Beta-ketoacyl synthase, C-terminal domain K00647 - 2.3.1.41 3.081e-204 641.0
PJS3_k127_5032011_1 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008195 384.0
PJS3_k127_5032011_2 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 321.0
PJS3_k127_5032011_3 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006277 281.0
PJS3_k127_5032011_4 COG1592 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007375 258.0
PJS3_k127_5032011_5 Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000001843 201.0
PJS3_k127_5032011_6 Belongs to the Fur family K09826 - - 0.000000000000000000000000000000000000000000000000000001566 194.0
PJS3_k127_5032011_7 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000005595 190.0
PJS3_k127_503590_0 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004832 333.0
PJS3_k127_503590_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 339.0
PJS3_k127_503590_2 CDP-alcohol phosphatidyltransferase K17103 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000346 250.0
PJS3_k127_503590_3 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016020,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046116,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072531,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1990397 - 0.000000000000000000000000000000000000000000000000000000000000000001005 232.0
PJS3_k127_503590_4 Mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000000000000000000000000000000000005306 225.0
PJS3_k127_5126819_0 Homospermidine synthase K00808 - 2.5.1.44 2.687e-209 662.0
PJS3_k127_5126819_1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01581 - 4.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005113 558.0
PJS3_k127_5126819_2 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009553 297.0
PJS3_k127_5126819_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000004753 192.0
PJS3_k127_5126819_4 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.000000000000000000000000000000002053 132.0
PJS3_k127_5137328_0 Binding-protein-dependent transport system inner membrane component K02054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 515.0
PJS3_k127_5137328_1 Spermidine putrescine-binding periplasmic protein K02055 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009198 472.0
PJS3_k127_5143812_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1528.0
PJS3_k127_5143812_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 473.0
PJS3_k127_5143812_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004991 432.0
PJS3_k127_5143812_3 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 411.0
PJS3_k127_5143812_4 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000001734 272.0
PJS3_k127_5143812_5 Nitrate reductase delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002673 268.0
PJS3_k127_5143812_6 Protein of unknown function (DUF3305) - - - 0.0000000000000000000000000000000000000000000000003176 181.0
PJS3_k127_5143812_7 Protein of unknown function (DUF3306) - - - 0.0000000000000000000000000003534 123.0
PJS3_k127_5143812_8 PFAM phosphoesterase, PA-phosphatase related - - - 0.00000000000000000008722 100.0
PJS3_k127_5143812_9 TIGRFAM formate dehydrogenase region TAT target - - - 0.00000001863 59.0
PJS3_k127_5204343_0 ABC transporter transmembrane region K02021 - - 1.283e-306 967.0
PJS3_k127_5204343_1 Glycosyltransferase family 28 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005331 584.0
PJS3_k127_5204343_10 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase K02851,K13007 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005229 282.0
PJS3_k127_5204343_11 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003313 279.0
PJS3_k127_5204343_12 amino acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003685 280.0
PJS3_k127_5204343_13 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000348 241.0
PJS3_k127_5204343_14 Belongs to the phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000000000000000036 231.0
PJS3_k127_5204343_15 S-adenosyl-L-methionine methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000003798 211.0
PJS3_k127_5204343_16 periplasmic or secreted lipoprotein - - - 0.000000000000000000000000000000000000000000000000000001994 197.0
PJS3_k127_5204343_17 cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000318 186.0
PJS3_k127_5204343_18 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000000000001258 169.0
PJS3_k127_5204343_19 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000000006327 129.0
PJS3_k127_5204343_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009897 551.0
PJS3_k127_5204343_20 polysaccharide deacetylase - - - 0.00000000000003872 76.0
PJS3_k127_5204343_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 506.0
PJS3_k127_5204343_4 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 491.0
PJS3_k127_5204343_5 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 470.0
PJS3_k127_5204343_6 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 370.0
PJS3_k127_5204343_7 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 352.0
PJS3_k127_5204343_8 Glycosyltransferase family 28 C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 342.0
PJS3_k127_5204343_9 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 299.0
PJS3_k127_5205237_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K02182,K20034 - 6.2.1.44,6.2.1.48 1.476e-297 918.0
PJS3_k127_5205237_1 BCCT, betaine/carnitine/choline family transporter K03451 - - 6.359e-281 871.0
PJS3_k127_5205237_10 YHS domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004108 263.0
PJS3_k127_5205237_11 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000002183 248.0
PJS3_k127_5205237_12 transcriptional - - - 0.0000000000000000000000000000000000000000000000000000000000000000002984 232.0
PJS3_k127_5205237_13 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001089 229.0
PJS3_k127_5205237_14 helix_turn_helix ASNC type K15782 - - 0.0000000000000000000000000000000000000000000000000000000000000004615 222.0
PJS3_k127_5205237_15 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000001386 230.0
PJS3_k127_5205237_16 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000000000000000009471 226.0
PJS3_k127_5205237_17 Putative DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000232 199.0
PJS3_k127_5205237_18 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000008557 175.0
PJS3_k127_5205237_19 Exopolysaccharide synthesis, ExoD - - - 0.00000000000000000000000000000000000004633 151.0
PJS3_k127_5205237_2 Glycine cleavage T-protein C-terminal barrel domain K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000874 613.0
PJS3_k127_5205237_20 integral membrane protein - - - 0.000000000000000000000000000000000001793 140.0
PJS3_k127_5205237_21 - - - - 0.0000000000908 72.0
PJS3_k127_5205237_22 - - - - 0.0000000003175 70.0
PJS3_k127_5205237_3 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005861 597.0
PJS3_k127_5205237_4 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003871,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0032259,GO:0042084,GO:0042085,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050667,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009718 497.0
PJS3_k127_5205237_5 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 490.0
PJS3_k127_5205237_6 Histidine kinase K07638 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005131 472.0
PJS3_k127_5205237_7 COG1024 Enoyl-CoA hydratase carnithine racemase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 390.0
PJS3_k127_5205237_8 Belongs to the UPF0276 family K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 351.0
PJS3_k127_5205237_9 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07659 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002808 284.0
PJS3_k127_5215076_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 428.0
PJS3_k127_5215076_1 NnrU protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001253 259.0
PJS3_k127_5215076_2 AzlC protein - - - 0.000000000000000000000000000000000000000000000000000002188 199.0
PJS3_k127_5215076_3 DinB family - - - 0.0000000000000000000000000000000000000008028 154.0
PJS3_k127_5215076_4 YGGT family K02221 - - 0.000000000000000000000000000002832 123.0
PJS3_k127_5215076_5 Protein of unknown function (DUF3253) - - - 0.00000000000000000000003533 102.0
PJS3_k127_5215076_6 Belongs to the UPF0235 family K09131 - - 0.0000000000000000009142 90.0
PJS3_k127_5215076_7 Branched-chain amino acid transport protein (AzlD) - - - 0.000000000000006051 78.0
PJS3_k127_5215076_8 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.00000000000002985 72.0
PJS3_k127_5216664_0 TRAP-type mannitol chloroaromatic compound transport system large permease component - - - 4.4e-323 1011.0
PJS3_k127_5216664_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 5.241e-231 724.0
PJS3_k127_5216664_10 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007098 483.0
PJS3_k127_5216664_11 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005589 336.0
PJS3_k127_5216664_12 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000005737 237.0
PJS3_k127_5216664_13 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000004228 230.0
PJS3_k127_5216664_14 FCD domain - - - 0.00000000000000000000000000000000000000000000000000000006854 207.0
PJS3_k127_5216664_15 Malonyl-CoA decarboxylase N-terminal domain - - - 0.0000000000000000000000000000000001654 137.0
PJS3_k127_5216664_16 RDD family - - - 0.00000000000000000000000007831 114.0
PJS3_k127_5216664_17 SnoaL-like domain - - - 0.0000000000000000000001147 101.0
PJS3_k127_5216664_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 9.604e-219 691.0
PJS3_k127_5216664_3 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 5.013e-218 683.0
PJS3_k127_5216664_4 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K18661 - - 2.929e-214 678.0
PJS3_k127_5216664_5 Cystathionine beta-synthase K01697 - 4.2.1.22 3.523e-206 651.0
PJS3_k127_5216664_6 Penicillin amidase K01434 - 3.5.1.11 3.711e-196 640.0
PJS3_k127_5216664_7 cystathionine K01758 - 4.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 582.0
PJS3_k127_5216664_8 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 579.0
PJS3_k127_5216664_9 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005537 554.0
PJS3_k127_5218975_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1289.0
PJS3_k127_5218975_1 Required for chromosome condensation and partitioning K03529 - - 0.0 1145.0
PJS3_k127_5218975_10 YHS domain - - - 0.000000000000000000000000000000000000000000000000000000003845 205.0
PJS3_k127_5218975_11 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000002308 179.0
PJS3_k127_5218975_12 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000007773 153.0
PJS3_k127_5218975_13 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000001306 132.0
PJS3_k127_5218975_14 Iron-binding zinc finger CDGSH type - - - 0.00000000000000000000000000000005074 127.0
PJS3_k127_5218975_15 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000003563 121.0
PJS3_k127_5218975_16 - - - - 0.0000000000000000000001107 104.0
PJS3_k127_5218975_17 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.000000000000000003093 89.0
PJS3_k127_5218975_18 Domain of unknown function (DUF4169) - - - 0.00001815 49.0
PJS3_k127_5218975_2 COG1960 Acyl-CoA dehydrogenases K20035 - - 4.752e-236 743.0
PJS3_k127_5218975_3 COG0277 FAD FMN-containing dehydrogenases K00102 - 1.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005128 575.0
PJS3_k127_5218975_4 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 477.0
PJS3_k127_5218975_5 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 477.0
PJS3_k127_5218975_6 Glycine cleavage T-protein C-terminal barrel domain K00605 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008483,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0016769,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0032991,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902494,GO:1990204 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 440.0
PJS3_k127_5218975_7 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 346.0
PJS3_k127_5218975_8 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000009365 247.0
PJS3_k127_5218975_9 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000002381 218.0
PJS3_k127_5227573_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1225.0
PJS3_k127_5227573_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 1.289e-315 978.0
PJS3_k127_5227573_10 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000571 497.0
PJS3_k127_5227573_11 PFAM Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004931 474.0
PJS3_k127_5227573_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 434.0
PJS3_k127_5227573_13 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 335.0
PJS3_k127_5227573_14 Uncharacterized protein family (UPF0051) K09014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 327.0
PJS3_k127_5227573_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 327.0
PJS3_k127_5227573_16 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 311.0
PJS3_k127_5227573_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009093 294.0
PJS3_k127_5227573_18 Ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 299.0
PJS3_k127_5227573_19 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 305.0
PJS3_k127_5227573_2 glutamine synthetase K01915 - 6.3.1.2 1.362e-278 859.0
PJS3_k127_5227573_20 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit K00334,K03943 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005363 287.0
PJS3_k127_5227573_21 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001572 268.0
PJS3_k127_5227573_22 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001651 253.0
PJS3_k127_5227573_23 Belongs to the HpcH HpaI aldolase family K00979,K02510 - 2.7.7.38,4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000002075 231.0
PJS3_k127_5227573_24 DsrE/DsrF-like family K09004 - - 0.00000000000000000000000000000000000000000000000000000000000007873 216.0
PJS3_k127_5227573_25 Belongs to the P(II) protein family K04751 GO:0003674,GO:0006808,GO:0008150,GO:0030234,GO:0050789,GO:0050790,GO:0065007,GO:0065009,GO:0098772 - 0.00000000000000000000000000000000000000000000000000000000004732 208.0
PJS3_k127_5227573_26 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000001831 213.0
PJS3_k127_5227573_27 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000001163 196.0
PJS3_k127_5227573_28 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000001363 206.0
PJS3_k127_5227573_29 COG1607 Acyl-CoA hydrolase K10806 - - 0.0000000000000000000000000000000000000000000000002215 180.0
PJS3_k127_5227573_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 8.199e-238 739.0
PJS3_k127_5227573_30 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000919 174.0
PJS3_k127_5227573_31 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000004844 175.0
PJS3_k127_5227573_32 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.0000000000000000000000000000000000000000009382 163.0
PJS3_k127_5227573_33 - - - - 0.000000000000000000000000000000000000003167 151.0
PJS3_k127_5227573_34 bacterial (prokaryotic) histone like domain K03530 - - 0.000000000000000000000000000000000000003663 148.0
PJS3_k127_5227573_35 Cytochrome c2 K08738 - - 0.000000000000000000000000000000001597 134.0
PJS3_k127_5227573_36 VanZ like family - - - 0.000000000000000000000000000012 121.0
PJS3_k127_5227573_37 COG0790 FOG TPR repeat, SEL1 subfamily - - - 0.00000000000000000000003544 113.0
PJS3_k127_5227573_38 - - - - 0.00000005927 61.0
PJS3_k127_5227573_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 2.878e-221 692.0
PJS3_k127_5227573_43 Domain of unknown function (DUF4154) - - - 0.0001791 51.0
PJS3_k127_5227573_5 Flavoprotein involved in K transport K07222 - - 4.343e-198 624.0
PJS3_k127_5227573_6 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 577.0
PJS3_k127_5227573_7 Belongs to the DEAD box helicase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 559.0
PJS3_k127_5227573_8 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039 541.0
PJS3_k127_5227573_9 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 508.0
PJS3_k127_5238677_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 2.269e-205 645.0
PJS3_k127_5238677_1 AMP-binding enzyme C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 462.0
PJS3_k127_5238677_2 dithiol-disulfide isomerase involved in polyketide biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003523 246.0
PJS3_k127_5243538_0 4Fe-4S dicluster domain - - - 2.819e-253 801.0
PJS3_k127_5243538_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 563.0
PJS3_k127_5243538_10 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001907 238.0
PJS3_k127_5243538_11 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000002621 174.0
PJS3_k127_5243538_12 - - - - 0.00000000000000000000000000000002015 132.0
PJS3_k127_5243538_13 Cytochrome c - - - 0.000000000000000001022 90.0
PJS3_k127_5243538_14 - - - - 0.00000000005068 69.0
PJS3_k127_5243538_15 Domain of unknown function (DUF1127) - - - 0.0000005099 54.0
PJS3_k127_5243538_2 RimK-like ATPgrasp N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005335 549.0
PJS3_k127_5243538_3 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 462.0
PJS3_k127_5243538_4 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 467.0
PJS3_k127_5243538_5 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 369.0
PJS3_k127_5243538_6 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007228 345.0
PJS3_k127_5243538_7 Transcriptional regulator K03566 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006788 314.0
PJS3_k127_5243538_8 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000002849 264.0
PJS3_k127_5243538_9 NlpC/P60 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008349 255.0
PJS3_k127_5249460_0 metal ion transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 582.0
PJS3_k127_5249460_1 Protein conserved in bacteria K16514 - 5.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 516.0
PJS3_k127_5249460_2 ammonia monooxygenase K07120 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 326.0
PJS3_k127_5249460_3 MlrC C-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002022 282.0
PJS3_k127_5249460_4 FCD - - - 0.000000000000000000000000000000000000000000000000000000000000000002471 234.0
PJS3_k127_5249460_5 Short-chain dehydrogenase reductase SDR K00059,K18337 - 1.1.1.100,1.1.1.173,1.1.1.377,1.1.1.378 0.000000000000000000000000000000000000000000000000000000001088 209.0
PJS3_k127_5249460_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000008066 117.0
PJS3_k127_5249460_7 - - - - 0.0000000000000008517 81.0
PJS3_k127_5249460_8 FAD dependent oxidoreductase K13796 - - 0.0000000011 59.0
PJS3_k127_5255968_0 COG0513 Superfamily II DNA and RNA helicases K17675 - 3.6.4.13 1.094e-288 912.0
PJS3_k127_5255968_1 COG1960 Acyl-CoA dehydrogenases K00248 - 1.3.8.1 2.039e-262 820.0
PJS3_k127_5255968_2 Molecular chaperone. Has ATPase activity K04079 - - 1.643e-239 756.0
PJS3_k127_5255968_3 Glutathione-dependent formaldehyde-activating, GFA - - - 0.000000000000000000000000000000000000000000000000000000000000000001212 237.0
PJS3_k127_5255968_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000001739 226.0
PJS3_k127_5255968_5 Thioesterase-like superfamily - - - 0.00000000000000000000000000000000000000009253 158.0
PJS3_k127_5255968_6 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.00000000000000000000000000001804 120.0
PJS3_k127_5256134_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003628 556.0
PJS3_k127_5256134_1 Predicted permease YjgP/YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009812 325.0
PJS3_k127_5256134_2 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.0009424 46.0
PJS3_k127_5261199_0 Probable molybdopterin binding domain K07141 - 2.7.7.76 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 563.0
PJS3_k127_5261199_1 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003941 251.0
PJS3_k127_5261199_2 XdhC Rossmann domain K07402 - - 0.00000000000000000000000001599 110.0
PJS3_k127_5263417_0 ABC-type transport system involved in Fe-S cluster assembly, permease component K09014 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009536,GO:0009842,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 - 1.084e-204 638.0
PJS3_k127_5263417_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 507.0
PJS3_k127_5263417_2 ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 407.0
PJS3_k127_5263417_3 Uncharacterized protein family (UPF0051) K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 329.0
PJS3_k127_5263417_4 NifU-like N terminal domain K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000008374 227.0
PJS3_k127_5263417_5 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000000005951 175.0
PJS3_k127_5263417_6 Iron-sulfur cluster assembly protein - - - 0.0000000000000000000000000000000000000000002247 164.0
PJS3_k127_5263417_7 oxidoreductase FAD NAD(P)-binding K14581 - 1.18.1.7 0.0000000000000000000000000000000000000001718 158.0
PJS3_k127_5299201_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 7.7e-322 988.0
PJS3_k127_5299201_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 3.278e-231 720.0
PJS3_k127_5299201_10 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 387.0
PJS3_k127_5299201_11 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 354.0
PJS3_k127_5299201_12 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 334.0
PJS3_k127_5299201_13 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 323.0
PJS3_k127_5299201_14 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005974 290.0
PJS3_k127_5299201_15 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000954 273.0
PJS3_k127_5299201_16 Cytochrome C1 family K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003082 262.0
PJS3_k127_5299201_17 Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I K02258 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003034 252.0
PJS3_k127_5299201_18 PFAM class II aldolase adducin family protein K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000001151 246.0
PJS3_k127_5299201_19 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000004028 237.0
PJS3_k127_5299201_2 peptidase U62, modulator of DNA gyrase K03568 - - 1.884e-225 730.0
PJS3_k127_5299201_20 Putative bacterial sensory transduction regulator - - - 0.0000000000000000000000000000000000000000000000000000000000005776 218.0
PJS3_k127_5299201_21 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000001995 207.0
PJS3_k127_5299201_22 SURF1-like protein K14998 - - 0.0000000000000000000000000000000000000000000000000002805 194.0
PJS3_k127_5299201_23 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000003397 175.0
PJS3_k127_5299201_24 Protein of unknown function (DUF983) - - - 0.00000000000000000000000000000000000001407 151.0
PJS3_k127_5299201_25 thioesterase - - - 0.000000000000000000000000000000000005378 142.0
PJS3_k127_5299201_26 Thioesterase-like superfamily - - - 0.0000000000000000000000000000000001313 137.0
PJS3_k127_5299201_27 Phasin protein - - - 0.0000000000000000000000000000006127 127.0
PJS3_k127_5299201_28 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000001001 124.0
PJS3_k127_5299201_29 Membrane fusogenic activity K09806 - - 0.00000000000000000000008067 104.0
PJS3_k127_5299201_3 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 1.173e-205 650.0
PJS3_k127_5299201_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 480.0
PJS3_k127_5299201_5 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 471.0
PJS3_k127_5299201_6 Protein of unknown function (DUF3422) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007384 469.0
PJS3_k127_5299201_7 cytochrome c oxidase K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 452.0
PJS3_k127_5299201_8 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 - 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 451.0
PJS3_k127_5299201_9 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 408.0
PJS3_k127_5304321_0 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 5.001e-234 727.0
PJS3_k127_5304321_1 Bacterial protein of unknown function (DUF898) - - - 0.0000000000000000000000000000000000000000000000000000000000000001005 235.0
PJS3_k127_5304321_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000034 228.0
PJS3_k127_5304321_3 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000003145 211.0
PJS3_k127_5309118_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family K00317 - 1.5.8.1,1.5.8.2 2.302e-242 766.0
PJS3_k127_5309118_1 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 439.0
PJS3_k127_5309118_10 NMT1-like family K02051 - - 0.00000000000000000006836 92.0
PJS3_k127_5309118_2 Cys/Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 391.0
PJS3_k127_5309118_3 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 347.0
PJS3_k127_5309118_4 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 334.0
PJS3_k127_5309118_5 ATPases associated with a variety of cellular activities K02049,K15555 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 325.0
PJS3_k127_5309118_6 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001404 289.0
PJS3_k127_5309118_7 Cupin domain - - - 0.000000000000000000000000000000000000000000000008107 178.0
PJS3_k127_5309118_8 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874,K01890,K04566,K06878 - 6.1.1.10,6.1.1.20,6.1.1.6 0.0000000000000000000000000000000000000000001325 162.0
PJS3_k127_5309118_9 EamA-like transporter family - - - 0.000000000000000000000000002142 123.0
PJS3_k127_5315368_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.292e-310 966.0
PJS3_k127_5315368_1 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K03821 - - 2.371e-291 906.0
PJS3_k127_5315368_10 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 464.0
PJS3_k127_5315368_11 Diaminopropionate ammonia-lyase K01751 - 4.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007282 409.0
PJS3_k127_5315368_12 Enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 361.0
PJS3_k127_5315368_13 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006639 361.0
PJS3_k127_5315368_14 spermidine synthase activity K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 366.0
PJS3_k127_5315368_15 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 364.0
PJS3_k127_5315368_16 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005051 271.0
PJS3_k127_5315368_17 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000159 262.0
PJS3_k127_5315368_18 CoA binding domain K06929 - - 0.00000000000000000000000000000000000000000000000000000000000000000001222 237.0
PJS3_k127_5315368_19 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000000000002631 236.0
PJS3_k127_5315368_2 single-stranded-DNA-specific exonuclease recJ K07462 - - 8.253e-218 689.0
PJS3_k127_5315368_20 hmm pf01177 K01799 - 5.2.1.1 0.0000000000000000000000000000000000000000000000000000000000006596 219.0
PJS3_k127_5315368_21 protein, possibly involved in aromatic compounds catabolism - - - 0.00000000000000000000000000000000000000000000000005006 181.0
PJS3_k127_5315368_22 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000000000007307 164.0
PJS3_k127_5315368_23 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000001378 161.0
PJS3_k127_5315368_24 Ubiquinol-cytochrome C chaperone K17662 - - 0.000000000000000000000000000000000000000000207 164.0
PJS3_k127_5315368_25 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000005953 161.0
PJS3_k127_5315368_26 transcriptional regulator, MerR - - - 0.0000000000000000000000000000000000000002138 154.0
PJS3_k127_5315368_27 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000003502 133.0
PJS3_k127_5315368_28 COG2913 Small protein A (tmRNA-binding) - - - 0.0000000000000000000000000000000007687 137.0
PJS3_k127_5315368_29 Uncharacterized ACR, COG1399 - - - 0.00000000000000000000000000005009 126.0
PJS3_k127_5315368_3 Cys/Met metabolism PLP-dependent enzyme K01738,K01740 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003961,GO:0004124,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006555,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0017144,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0050667,GO:0071265,GO:0071266,GO:0071268,GO:0071269,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47,2.5.1.49 5.41e-205 648.0
PJS3_k127_5315368_30 - - - - 0.0000000000000000000000000001504 118.0
PJS3_k127_5315368_31 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000008515 98.0
PJS3_k127_5315368_32 - - - - 0.00000004283 54.0
PJS3_k127_5315368_33 OmpA family - - - 0.0000006592 60.0
PJS3_k127_5315368_4 Aminotransferase - - - 8.667e-194 615.0
PJS3_k127_5315368_5 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005288 540.0
PJS3_k127_5315368_6 Creatinase/Prolidase N-terminal domain K01271 - 3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 482.0
PJS3_k127_5315368_7 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009256 479.0
PJS3_k127_5315368_8 COG1494 Fructose-1,6-bisphosphatase sedoheptulose 1,7-bisphosphatase and related proteins K11532 - 3.1.3.11,3.1.3.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 477.0
PJS3_k127_5315368_9 Iron-containing alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004029 467.0
PJS3_k127_5315404_0 - - - - 4.734e-270 846.0
PJS3_k127_5315404_1 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 601.0
PJS3_k127_5316710_0 MaoC like domain K14449 GO:0003674,GO:0003824,GO:0006082,GO:0006083,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017001,GO:0017144,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0045733,GO:0046395,GO:0071704,GO:0072329,GO:1901575 4.2.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008215 489.0
PJS3_k127_5316710_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004457 486.0
PJS3_k127_5316710_2 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008828 385.0
PJS3_k127_5316710_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009465 320.0
PJS3_k127_5316710_4 Phosphomethylpyrimidine kinase K00868 - 2.7.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 292.0
PJS3_k127_5316710_5 Heat shock 70 kDa protein K04043 - - 0.000000000000000000000000000000008655 131.0
PJS3_k127_5326148_0 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain K01596 - 4.1.1.32 9.895e-289 893.0
PJS3_k127_5329040_0 Belongs to the GcvT family - - - 2.456e-244 763.0
PJS3_k127_5329040_1 ATP dependent DNA ligase C terminal region K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 575.0
PJS3_k127_5329040_2 ATPases associated with a variety of cellular activities K02000 GO:0000166,GO:0003674,GO:0004888,GO:0005034,GO:0005215,GO:0005275,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006950,GO:0006970,GO:0006972,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0009628,GO:0009987,GO:0015695,GO:0015696,GO:0015697,GO:0015837,GO:0015838,GO:0016020,GO:0016021,GO:0017076,GO:0022857,GO:0023052,GO:0030554,GO:0031224,GO:0031460,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0038023,GO:0043167,GO:0043168,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0060089,GO:0065007,GO:0071702,GO:0071705,GO:0071944,GO:0072337,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 458.0
PJS3_k127_5329040_3 Choline ABC transporter periplasmic binding protein K02002 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 417.0
PJS3_k127_5329040_4 COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain K00544,K00548 - 2.1.1.13,2.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008832 414.0
PJS3_k127_5329040_5 Binding-protein-dependent transport system inner membrane component K02001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 411.0
PJS3_k127_5329040_6 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008055 308.0
PJS3_k127_5364236_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01908 - 6.2.1.17 0.0 1027.0
PJS3_k127_5364236_1 AMP-binding enzyme C-terminal domain K00666,K02182 - 6.2.1.48 4.14e-261 813.0
PJS3_k127_5364236_10 - - - - 0.00000000000000000000000000794 123.0
PJS3_k127_5364236_11 Protein of unknown function (DUF2390) - - - 0.0000000000000000000001012 104.0
PJS3_k127_5364236_12 small protein containing a coiled-coil domain - - - 0.000000000000000003202 86.0
PJS3_k127_5364236_13 Belongs to the CarB family K01955 - 6.3.5.5 0.0000000001115 62.0
PJS3_k127_5364236_14 Small protein - - - 0.000001477 56.0
PJS3_k127_5364236_2 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 499.0
PJS3_k127_5364236_3 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009814 452.0
PJS3_k127_5364236_4 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 382.0
PJS3_k127_5364236_5 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 289.0
PJS3_k127_5364236_6 Mitochondrial fission ELM1 K07276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002482 285.0
PJS3_k127_5364236_7 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005448 251.0
PJS3_k127_5364236_8 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000006009 246.0
PJS3_k127_5364236_9 helix_turn_helix ASNC type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003986 241.0
PJS3_k127_5371473_0 Formate dehydrogenase subunit alpha - - - 0.0 1466.0
PJS3_k127_5371473_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1332.0
PJS3_k127_5371473_10 WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009738 380.0
PJS3_k127_5371473_11 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000000001263 211.0
PJS3_k127_5371473_12 Histidine phosphotransferase C-terminal domain K13588 - - 0.0000000000000000000000000000000009072 139.0
PJS3_k127_5371473_13 Ankyrin 1, erythrocytic K10380 GO:0002262,GO:0002376,GO:0002520,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006887,GO:0006888,GO:0006996,GO:0007010,GO:0007163,GO:0007275,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0010638,GO:0012505,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019438,GO:0019899,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031672,GO:0031674,GO:0032501,GO:0032502,GO:0032589,GO:0032940,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0034101,GO:0034613,GO:0034641,GO:0035088,GO:0035090,GO:0042383,GO:0042592,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043292,GO:0044237,GO:0044249,GO:0044271,GO:0044304,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051641,GO:0051649,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0060090,GO:0061245,GO:0061515,GO:0065007,GO:0065008,GO:0070727,GO:0071704,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0120025,GO:0120038,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1990778 - 0.000000000000000000000000001576 126.0
PJS3_k127_5371473_14 Histidine kinase K13587 - 2.7.13.3 0.000000000000000001018 97.0
PJS3_k127_5371473_15 Protein of unknown function (DUF3553) - - - 0.00000000000000001446 83.0
PJS3_k127_5371473_16 invasion associated locus B - - - 0.00000000000005601 79.0
PJS3_k127_5371473_17 PFAM Methyltransferase - - - 0.00000001369 67.0
PJS3_k127_5371473_19 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000002959 63.0
PJS3_k127_5371473_2 Dehydrogenase K00122 - 1.17.1.9 2.076e-261 815.0
PJS3_k127_5371473_3 COG1178 ABC-type Fe3 transport system, permease component K02011 - - 9.3e-231 730.0
PJS3_k127_5371473_4 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 580.0
PJS3_k127_5371473_5 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 446.0
PJS3_k127_5371473_6 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009773 456.0
PJS3_k127_5371473_7 Iron deficiency-induced protein A K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 436.0
PJS3_k127_5371473_8 4Fe-4S dicluster domain K00124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005136 417.0
PJS3_k127_5371473_9 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K13584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 373.0
PJS3_k127_5379370_0 negative regulation of transcription, DNA-templated - - - 1.839e-194 624.0
PJS3_k127_5379370_1 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 562.0
PJS3_k127_5391552_0 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005223 336.0
PJS3_k127_5391552_2 - - - - 0.0000002931 52.0
PJS3_k127_5400485_0 phosphoenolpyruvate carboxylase activity K01595 - 4.1.1.31 1.874e-227 737.0
PJS3_k127_5400485_1 N-methylhydantoinase A acetone carboxylase, beta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 616.0
PJS3_k127_5400485_10 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000002344 245.0
PJS3_k127_5400485_11 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000303 252.0
PJS3_k127_5400485_12 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008244 244.0
PJS3_k127_5400485_13 protein conserved in bacteria K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000002056 203.0
PJS3_k127_5400485_14 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000000000000000000000000003887 196.0
PJS3_k127_5400485_15 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.0000000000000000000000000000000000000000000000006489 180.0
PJS3_k127_5400485_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009829 564.0
PJS3_k127_5400485_3 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 471.0
PJS3_k127_5400485_4 Coenzyme F420-reducing hydrogenase, beta subunit K00441 - 1.12.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004521 415.0
PJS3_k127_5400485_5 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029,K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 377.0
PJS3_k127_5400485_6 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007362 325.0
PJS3_k127_5400485_7 Fructosamine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 310.0
PJS3_k127_5400485_8 Putative amidoligase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001251 277.0
PJS3_k127_5400485_9 Polyhydroxyalkanoate synthesis repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008042 264.0
PJS3_k127_5420580_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 0.0 1015.0
PJS3_k127_5420580_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 436.0
PJS3_k127_5420580_10 FAD-dependent pyridine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001147 255.0
PJS3_k127_5420580_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 398.0
PJS3_k127_5420580_3 PFAM Binding-protein-dependent transport system inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 327.0
PJS3_k127_5420580_4 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007771 328.0
PJS3_k127_5420580_5 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009191 321.0
PJS3_k127_5420580_6 Belongs to the BI1 family K06890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008167 315.0
PJS3_k127_5420580_7 Malate/L-lactate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007158 319.0
PJS3_k127_5420580_8 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009611 280.0
PJS3_k127_5420580_9 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005481 280.0
PJS3_k127_5477343_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1328.0
PJS3_k127_5477343_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 8.865e-273 853.0
PJS3_k127_5477343_10 Nucleotidyl transferase K00966,K00992 - 2.7.7.13,2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004999 283.0
PJS3_k127_5477343_11 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000000000105 230.0
PJS3_k127_5477343_12 Ferredoxin, 2Fe-2S - - - 0.0000000000000000000000000000000000000000000000000001026 188.0
PJS3_k127_5477343_13 ATPase or kinase K06925,K07102 - 2.7.1.221 0.0000000000000000000000000000000000000008957 167.0
PJS3_k127_5477343_14 domain, Protein - - - 0.00000000000000000000000000002262 120.0
PJS3_k127_5477343_15 helicase K16899 - 3.6.4.12 0.000006097 50.0
PJS3_k127_5477343_2 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 9.58e-246 775.0
PJS3_k127_5477343_3 COG0744 Membrane carboxypeptidase (penicillin-binding protein) K05366 - 2.4.1.129,3.4.16.4 4.336e-220 702.0
PJS3_k127_5477343_4 reductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 477.0
PJS3_k127_5477343_5 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006544 452.0
PJS3_k127_5477343_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - GO:0003674,GO:0003824,GO:0004033,GO:0008106,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0055114 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 370.0
PJS3_k127_5477343_7 Chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 344.0
PJS3_k127_5477343_8 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 309.0
PJS3_k127_5477343_9 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 294.0
PJS3_k127_5489237_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 4.472e-263 816.0
PJS3_k127_5489237_1 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 346.0
PJS3_k127_5513824_0 COG3119 Arylsulfatase A and related enzymes K01130 - 3.1.6.1 2.07e-283 874.0
PJS3_k127_5513824_1 Sugar (and other) transporter - - - 5.088e-214 674.0
PJS3_k127_5513824_2 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway K03707 - 3.5.99.2 0.0000000000000000000000009532 105.0
PJS3_k127_5533387_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1079.0
PJS3_k127_5533387_1 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 1.477e-261 823.0
PJS3_k127_5533387_10 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009543 337.0
PJS3_k127_5533387_11 COG3474 Cytochrome c2 K08738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 318.0
PJS3_k127_5533387_12 cell division K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004516 297.0
PJS3_k127_5533387_13 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 288.0
PJS3_k127_5533387_14 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092,K18649 - 3.1.3.15,3.1.3.25,3.1.3.93 0.000000000000000000000000000000000000000000000000000000000000000000000000000004245 271.0
PJS3_k127_5533387_15 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001894 258.0
PJS3_k127_5533387_16 Cell division protein K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001729 256.0
PJS3_k127_5533387_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000053 261.0
PJS3_k127_5533387_18 Acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000003671 239.0
PJS3_k127_5533387_19 DUF218 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000007303 226.0
PJS3_k127_5533387_2 Belongs to the ABC transporter superfamily K13896 - - 2.8e-247 774.0
PJS3_k127_5533387_20 chorismate mutase - - - 0.0000000000000000000000000000000000000000000000000000000005765 212.0
PJS3_k127_5533387_21 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000001359 175.0
PJS3_k127_5533387_22 Uncharacterized protein conserved in bacteria (DUF2125) - - - 0.000000000000000000000000000000000000000004817 169.0
PJS3_k127_5533387_23 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000002771 145.0
PJS3_k127_5533387_24 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.0000000000003391 70.0
PJS3_k127_5533387_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 1.66e-201 645.0
PJS3_k127_5533387_4 transport system, permease component K13895 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 571.0
PJS3_k127_5533387_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003988 448.0
PJS3_k127_5533387_6 prephenate dehydrogenase K00220 - 1.3.1.12,1.3.1.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 433.0
PJS3_k127_5533387_7 Prephenate dehydratase K04518 - 4.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 392.0
PJS3_k127_5533387_8 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K12972 - 1.1.1.79,1.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 355.0
PJS3_k127_5533387_9 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 342.0
PJS3_k127_5563475_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 586.0
PJS3_k127_5563475_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006822 530.0
PJS3_k127_5563475_2 NMT1-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 479.0
PJS3_k127_5563475_3 Flavin reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002449 286.0
PJS3_k127_5563475_4 FCD K05799 - - 0.000000000000000000000000000000000000000002288 164.0
PJS3_k127_5563475_5 3-oxoadipate enol-lactonase - - - 0.000000000000000003337 89.0
PJS3_k127_5567755_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008874 561.0
PJS3_k127_5567755_1 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 343.0
PJS3_k127_5567755_10 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000001213 73.0
PJS3_k127_5567755_11 Resolvase - - - 0.0000000909 54.0
PJS3_k127_5567755_2 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000001611 232.0
PJS3_k127_5567755_3 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000000000000000000007168 224.0
PJS3_k127_5567755_4 Trypsin - - - 0.0000000000000000000000000000000000000000000000000000000000000001257 236.0
PJS3_k127_5567755_5 Uncharacterised protein family (UPF0262) - - - 0.0000000000000000000000000000000000000000000000000000000000000004402 224.0
PJS3_k127_5567755_6 Ribonuclease E/G family - - - 0.000000000000000000000000000000000000000000000000000000000000214 233.0
PJS3_k127_5567755_7 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000000002461 143.0
PJS3_k127_5567755_8 Protein of unknown function (DUF2948) - - - 0.000000000000000000000000000000001333 135.0
PJS3_k127_5567755_9 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000000003818 89.0
PJS3_k127_5617986_0 COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide 5, 6-dimethylbenzimidazole phosphoribosyltransferase) K09883 - 6.6.1.2 1.136e-249 788.0
PJS3_k127_5617986_1 Cobaltochelatase CobS subunit N terminal K09882 - 6.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 582.0
PJS3_k127_5617986_10 SpoU rRNA Methylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000008078 228.0
PJS3_k127_5617986_11 Protein of unknown function (DUF2889) - - - 0.000000000000000000000000000000000000000000000000000000000000004223 222.0
PJS3_k127_5617986_12 DnaJ molecular chaperone homology domain - - - 0.00000000000000000000000000000000000000000000000000001877 194.0
PJS3_k127_5617986_13 - - - - 0.00000000000000000000000000000000000000000000000001301 199.0
PJS3_k127_5617986_14 invasion associated locus B - - - 0.0000000000000000000000000000000000000000000007299 172.0
PJS3_k127_5617986_15 DinB family - - - 0.00000000000000000000000000000000000000001599 158.0
PJS3_k127_5617986_16 Belongs to the BolA IbaG family K05527,K22066 - - 0.0000000000000000000000000001747 119.0
PJS3_k127_5617986_17 Ribbon-helix-helix domain - - - 0.0000000000000000000000003394 107.0
PJS3_k127_5617986_18 - - - - 0.00000000000000008629 85.0
PJS3_k127_5617986_19 EamA-like transporter family - - - 0.00000000005405 67.0
PJS3_k127_5617986_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 550.0
PJS3_k127_5617986_20 - - - - 0.00007549 48.0
PJS3_k127_5617986_3 Mg2 and Co2 transporter CorB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 552.0
PJS3_k127_5617986_4 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 467.0
PJS3_k127_5617986_5 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 471.0
PJS3_k127_5617986_6 L-asparaginase II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 434.0
PJS3_k127_5617986_7 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 408.0
PJS3_k127_5617986_8 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 402.0
PJS3_k127_5617986_9 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000000000000000000000000000000000000001044 235.0
PJS3_k127_5680522_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 4.819e-283 880.0
PJS3_k127_5680522_1 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 1.128e-265 826.0
PJS3_k127_5680522_10 Predicted integral membrane protein (DUF2189) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001372 273.0
PJS3_k127_5680522_11 cation diffusion facilitator family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002421 264.0
PJS3_k127_5680522_12 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005376 247.0
PJS3_k127_5680522_13 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000007278 130.0
PJS3_k127_5680522_14 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000000006372 122.0
PJS3_k127_5680522_15 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000001423 98.0
PJS3_k127_5680522_16 Cbb3-type cytochrome oxidase component FixQ K00407 - - 0.0000000002361 63.0
PJS3_k127_5680522_17 Protein conserved in bacteria - - - 0.00000001116 60.0
PJS3_k127_5680522_2 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 643.0
PJS3_k127_5680522_3 Surface antigen K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 465.0
PJS3_k127_5680522_4 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004366 424.0
PJS3_k127_5680522_5 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007801 382.0
PJS3_k127_5680522_6 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007229 358.0
PJS3_k127_5680522_7 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 350.0
PJS3_k127_5680522_8 Glycosyl transferases group 1 K21011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 309.0
PJS3_k127_5680522_9 COG0530 Ca2 Na antiporter K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001196 275.0
PJS3_k127_5696839_0 COG0747 ABC-type dipeptide transport system, periplasmic component K02035 - - 1.597e-228 719.0
PJS3_k127_5696839_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001062 262.0
PJS3_k127_5696839_2 Dodecin K09165 - - 0.0000000000000002914 80.0
PJS3_k127_5709411_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 506.0
PJS3_k127_5709411_1 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000001456 234.0
PJS3_k127_5755015_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 440.0
PJS3_k127_5755015_1 Acetolactate synthase small K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000137 238.0
PJS3_k127_5847002_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1859.0
PJS3_k127_5847002_1 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 5.816e-229 715.0
PJS3_k127_5847002_10 Zn-dependent protease, contains TPR repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 393.0
PJS3_k127_5847002_11 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 381.0
PJS3_k127_5847002_12 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 372.0
PJS3_k127_5847002_13 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 367.0
PJS3_k127_5847002_14 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 345.0
PJS3_k127_5847002_15 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 325.0
PJS3_k127_5847002_16 COG0530 Ca2 Na antiporter K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007298 316.0
PJS3_k127_5847002_17 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 GO:0003674,GO:0003824,GO:0004733,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 293.0
PJS3_k127_5847002_18 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002005 280.0
PJS3_k127_5847002_19 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000003568 281.0
PJS3_k127_5847002_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.03e-212 666.0
PJS3_k127_5847002_20 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000000000000000000007941 226.0
PJS3_k127_5847002_21 translation initiation inhibitor, yjgF family - - - 0.0000000000000000000000000000000000000000000000000000000000004 216.0
PJS3_k127_5847002_22 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000001381 217.0
PJS3_k127_5847002_23 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000000205 213.0
PJS3_k127_5847002_24 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000127 204.0
PJS3_k127_5847002_25 17 kDa outer membrane surface antigen - - - 0.0000000000000000000000000000000000000000000000000000005517 197.0
PJS3_k127_5847002_26 Putative AphA-like transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000003364 196.0
PJS3_k127_5847002_27 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000000000000000006298 200.0
PJS3_k127_5847002_28 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.000000000000000000000000000000000000000000000000006277 186.0
PJS3_k127_5847002_29 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000001989 175.0
PJS3_k127_5847002_3 Creatinase/Prolidase N-terminal domain K01262,K01271,K08688 - 3.4.11.9,3.4.13.9,3.5.3.3 2.081e-200 633.0
PJS3_k127_5847002_30 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 GO:0003674,GO:0003824,GO:0003989,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009305,GO:0009987,GO:0016049,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 - 0.0000000000000000000000000000000000000000000001586 172.0
PJS3_k127_5847002_31 - - - - 0.0000000000000000000000000000000000000000000002515 170.0
PJS3_k127_5847002_32 Phosphoglycerate mutase family K15634 - 5.4.2.12 0.0000000000000000000000000000000000000000000005221 173.0
PJS3_k127_5847002_33 NADH ubiquinone oxidoreductase 17.2 kD subunit - - - 0.0000000000000000000000000000000000000000001822 162.0
PJS3_k127_5847002_34 Acetyltransferase K03829 - - 0.0000000000000000000000000000000000000004928 157.0
PJS3_k127_5847002_35 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000000000000000000001672 147.0
PJS3_k127_5847002_36 EamA-like transporter family - - - 0.000000000000000000000000000000000000004243 158.0
PJS3_k127_5847002_37 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000000936 134.0
PJS3_k127_5847002_38 protein conserved in bacteria - - - 0.00000000000000000000000000000002502 131.0
PJS3_k127_5847002_39 - - - - 0.00000000000000000000000004682 108.0
PJS3_k127_5847002_4 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008363 568.0
PJS3_k127_5847002_40 glutamine synthetase K01915 GO:0003674,GO:0003824,GO:0006576,GO:0006595,GO:0006598,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009308,GO:0009310,GO:0009445,GO:0009447,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0034024,GO:0034641,GO:0042402,GO:0044106,GO:0044237,GO:0071704,GO:0097164,GO:1901564,GO:1901565,GO:1901575 6.3.1.2 0.000000000007651 68.0
PJS3_k127_5847002_5 Aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 500.0
PJS3_k127_5847002_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 437.0
PJS3_k127_5847002_7 malonyl CoA-acyl carrier protein transacylase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 428.0
PJS3_k127_5847002_8 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 422.0
PJS3_k127_5847002_9 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 413.0
PJS3_k127_5852547_0 Putative serine dehydratase domain - - - 1.935e-203 637.0
PJS3_k127_5852547_1 threonine dehydratase K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 557.0
PJS3_k127_5852547_2 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000003561 76.0
PJS3_k127_5854248_0 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 472.0
PJS3_k127_5854248_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000001304 210.0
PJS3_k127_5854248_2 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000004048 180.0
PJS3_k127_5855455_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 5.012e-317 987.0
PJS3_k127_5855455_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000004074 129.0
PJS3_k127_5855455_2 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000008522 116.0
PJS3_k127_5855455_3 - - - - 0.00000000000002521 79.0
PJS3_k127_5855455_5 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00000004626 58.0
PJS3_k127_5865646_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 2.897e-258 808.0
PJS3_k127_5865646_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 519.0
PJS3_k127_5865646_2 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 444.0
PJS3_k127_5865646_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 304.0
PJS3_k127_5867859_0 DNA polymerase K02337 - 2.7.7.7 0.0 1477.0
PJS3_k127_5867859_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 4.496e-222 696.0
PJS3_k127_5867859_10 Methyladenine glycosylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001339 263.0
PJS3_k127_5867859_11 COG0346 Lactoylglutathione lyase and related lyases K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000007931 248.0
PJS3_k127_5867859_12 Protein of unknown function (DUF1467) - - - 0.000000000000000000000000277 106.0
PJS3_k127_5867859_13 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000002726 66.0
PJS3_k127_5867859_2 COG4591 ABC-type transport system, involved in lipoprotein release, permease component K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 509.0
PJS3_k127_5867859_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 422.0
PJS3_k127_5867859_4 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 404.0
PJS3_k127_5867859_5 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000878 374.0
PJS3_k127_5867859_6 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 321.0
PJS3_k127_5867859_7 hydrolase of the metallo-beta-lactamase superfamily K12574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 319.0
PJS3_k127_5867859_8 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 291.0
PJS3_k127_5867859_9 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007288 273.0
PJS3_k127_5868085_0 Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 539.0
PJS3_k127_5868085_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039 375.0
PJS3_k127_5868085_2 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004043 280.0
PJS3_k127_5868085_3 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001292 282.0
PJS3_k127_5899137_0 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes K00164 - 1.2.4.2 0.0 1411.0
PJS3_k127_5899137_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 6.008e-218 681.0
PJS3_k127_5899137_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0030060,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 524.0
PJS3_k127_5899137_3 CoA binding domain K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 508.0
PJS3_k127_5899137_4 Glycosyl transferase family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 401.0
PJS3_k127_5899137_5 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000007474 241.0
PJS3_k127_5899137_6 OmpW family K07275 - - 0.0000000000000000000000000000000000000000000000000000000000008834 217.0
PJS3_k127_5899137_7 AFG1-like ATPase K06916 - - 0.0000000000000000000000000000000000005882 141.0
PJS3_k127_5899137_8 GtrA-like protein - - - 0.00000008658 59.0
PJS3_k127_5911863_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 8.615e-247 769.0
PJS3_k127_5911863_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007869 297.0
PJS3_k127_5911863_2 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000829 256.0
PJS3_k127_5911863_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000004652 125.0
PJS3_k127_5914973_0 Dehydratase family K01690 - 4.2.1.12 4.304e-278 866.0
PJS3_k127_5914973_1 COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins K03466 - - 1.19e-272 863.0
PJS3_k127_5914973_10 COG0436 Aspartate tyrosine aromatic aminotransferase K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006332 413.0
PJS3_k127_5914973_11 Heat shock 70 kDa protein K04043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 388.0
PJS3_k127_5914973_12 Protein of unknown function (DUF3095) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006285 377.0
PJS3_k127_5914973_13 COG0708 Exonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 362.0
PJS3_k127_5914973_14 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 359.0
PJS3_k127_5914973_15 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 356.0
PJS3_k127_5914973_16 Thioredoxin K05838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005532 324.0
PJS3_k127_5914973_17 GXGXG motif K22082 - 2.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 303.0
PJS3_k127_5914973_18 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 292.0
PJS3_k127_5914973_19 Transcriptional - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002344 261.0
PJS3_k127_5914973_2 Conserved region in glutamate synthase K22083 - 2.1.1.21 2.842e-253 787.0
PJS3_k127_5914973_20 AAA domain, putative AbiEii toxin, Type IV TA system K16784 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001098 252.0
PJS3_k127_5914973_21 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001248 248.0
PJS3_k127_5914973_22 2-dehydro-3-deoxyphosphogluconate aldolase 4-hydroxy-2-oxoglutarate aldolase K01625 - 4.1.2.14,4.1.3.42 0.0000000000000000000000000000000000000000000000000000000000000000000003952 244.0
PJS3_k127_5914973_23 2OG-Fe(II) oxygenase superfamily K03919 - 1.14.11.33 0.000000000000000000000000000000000000000000000000000000000000000000001376 246.0
PJS3_k127_5914973_24 to the N-terminal domain of Lon protease K01338,K07157 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000005058 241.0
PJS3_k127_5914973_25 Aminoacyl-tRNA editing domain K19055 - - 0.0000000000000000000000000000000000000000000000000000000000000002408 226.0
PJS3_k127_5914973_26 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000000000009415 194.0
PJS3_k127_5914973_27 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000000000000000000000000001198 193.0
PJS3_k127_5914973_28 BioY protein K03523 - - 0.0000000000000000000000000000000000000000000000000003005 195.0
PJS3_k127_5914973_29 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000006196 169.0
PJS3_k127_5914973_3 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K01810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 8.424e-212 674.0
PJS3_k127_5914973_30 Thioesterase K07107 - - 0.000000000000000000000000000000000000000003914 158.0
PJS3_k127_5914973_31 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000001861 162.0
PJS3_k127_5914973_32 Cobalt transport protein K16783 - - 0.0000000000000000000000000000000000000009262 160.0
PJS3_k127_5914973_33 COG0655 Multimeric flavodoxin WrbA - - - 0.000000000000000000000000001573 114.0
PJS3_k127_5914973_34 Belongs to the UPF0434 family K09791 - - 0.00000000000000000000006548 99.0
PJS3_k127_5914973_35 Stage II sporulation protein E - - - 0.00000000001101 72.0
PJS3_k127_5914973_36 - - - - 0.00001786 52.0
PJS3_k127_5914973_37 - - - - 0.0007204 44.0
PJS3_k127_5914973_4 Glutamine synthetase, catalytic domain K01915,K01949 - 6.3.1.2,6.3.4.12 7.253e-202 637.0
PJS3_k127_5914973_5 Xaa-Pro aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008241 577.0
PJS3_k127_5914973_6 COG0004 Ammonia permease K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 583.0
PJS3_k127_5914973_7 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 514.0
PJS3_k127_5914973_8 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 474.0
PJS3_k127_5914973_9 Glutamine amidotransferase domain K22081 - 2.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 432.0
PJS3_k127_5919997_0 Oligopeptide/dipeptide transporter, C-terminal region K02031,K02032 - - 3.731e-259 814.0
PJS3_k127_5919997_1 N-terminal TM domain of oligopeptide transport permease C K02034 - - 2.636e-197 619.0
PJS3_k127_5919997_2 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 496.0
PJS3_k127_5919997_3 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000009025 194.0
PJS3_k127_5919997_4 Glycosyl transferase family 41 - - - 0.0000000000000000000002836 106.0
PJS3_k127_5919997_5 - - - - 0.0000000005468 67.0
PJS3_k127_5935627_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1007.0
PJS3_k127_5935627_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 3.222e-244 768.0
PJS3_k127_5935627_10 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 371.0
PJS3_k127_5935627_11 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 367.0
PJS3_k127_5935627_12 MotA TolQ ExbB proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006497 346.0
PJS3_k127_5935627_13 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 314.0
PJS3_k127_5935627_14 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000007757 258.0
PJS3_k127_5935627_15 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000001743 219.0
PJS3_k127_5935627_16 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000000000000000001328 204.0
PJS3_k127_5935627_17 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.00000000000000000000000000000000000000000000000000002948 191.0
PJS3_k127_5935627_18 N-terminal half of MaoC dehydratase - - - 0.0000000000000000000000000000000000000000000000001122 181.0
PJS3_k127_5935627_19 Cell division and transport-associated protein TolA - - - 0.0000000000000000000000000000000000000000000003857 179.0
PJS3_k127_5935627_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 8.849e-226 704.0
PJS3_k127_5935627_20 - - - - 0.000000000000000000000000000000000000000002151 177.0
PJS3_k127_5935627_21 thioesterase' K07107 - - 0.0000000000000000000000000000000000239 140.0
PJS3_k127_5935627_22 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000002262 120.0
PJS3_k127_5935627_23 Paraquat-inducible protein A - - - 0.00000000000000000001236 98.0
PJS3_k127_5935627_3 COG0471 Di- and tricarboxylate transporters - - - 3.382e-219 695.0
PJS3_k127_5935627_4 Involved in the TonB-independent uptake of proteins K03641 - - 9.343e-211 666.0
PJS3_k127_5935627_5 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005252 596.0
PJS3_k127_5935627_6 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 572.0
PJS3_k127_5935627_7 Holliday junction DNA helicase ruvB C-terminus K03551 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006853 548.0
PJS3_k127_5935627_8 RNA polymerase sigma K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004425 474.0
PJS3_k127_5935627_9 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 381.0
PJS3_k127_5939863_0 DEAD/H associated K03724 - - 0.0 1137.0
PJS3_k127_5939863_1 Bacterial protein of unknown function (DUF839) K07093 - - 6.137e-278 869.0
PJS3_k127_5939863_10 EamA-like transporter family K15270 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 289.0
PJS3_k127_5939863_11 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000101 278.0
PJS3_k127_5939863_12 Calcineurin-like phosphoesterase K06953 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007397 270.0
PJS3_k127_5939863_13 Periplasmic solute binding protein K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005995 263.0
PJS3_k127_5939863_14 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001369 235.0
PJS3_k127_5939863_15 ATP dependent DNA ligase C terminal region K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000001714 224.0
PJS3_k127_5939863_16 Protein of unknown function (DUF1194) - - - 0.00000000000000000000000000000000000000000000000000000000000000573 225.0
PJS3_k127_5939863_17 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000003647 214.0
PJS3_k127_5939863_18 COG2335, Secreted and surface protein containing fasciclin-like repeats - - - 0.0000000000000000000000000000000000000000000000000002764 189.0
PJS3_k127_5939863_19 Belongs to the Fur family K09823 - - 0.000000000000000000000000000000000000000000000000006641 187.0
PJS3_k127_5939863_2 Belongs to the DNA photolyase family K01669 - 4.1.99.3 2.018e-205 649.0
PJS3_k127_5939863_20 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.00000000000000000000000000000000000000000002867 164.0
PJS3_k127_5939863_21 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000002237 163.0
PJS3_k127_5939863_22 Putative peptidoglycan binding domain - - - 0.000000000000000000000000000000002227 136.0
PJS3_k127_5939863_23 Staphylococcal nuclease homologue - - - 0.0000000000000000000218 96.0
PJS3_k127_5939863_24 Rhomboid family - - - 0.0000000000000000001144 99.0
PJS3_k127_5939863_25 signal transduction histidine kinase K13587 - 2.7.13.3 0.000000000000000005388 93.0
PJS3_k127_5939863_26 Superfamily I DNA and RNA helicases and helicase subunits - - - 0.000000002299 72.0
PJS3_k127_5939863_27 response regulator K08282,K13419 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.7.11.1 0.00000007294 64.0
PJS3_k127_5939863_3 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 497.0
PJS3_k127_5939863_4 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007327 456.0
PJS3_k127_5939863_5 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 341.0
PJS3_k127_5939863_6 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009128 341.0
PJS3_k127_5939863_7 COG1108 ABC-type Mn2 Zn2 transport systems, permease components K02075,K09816 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 308.0
PJS3_k127_5939863_8 Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system K02074,K09817 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 304.0
PJS3_k127_5939863_9 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 292.0
PJS3_k127_6014434_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1242.0
PJS3_k127_6014434_1 Long-chain fatty acid--CoA ligase K01897 - 6.2.1.3 3.155e-298 927.0
PJS3_k127_6014434_10 branched-chain amino acid K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009403 441.0
PJS3_k127_6014434_11 COG1131 ABC-type multidrug transport system, ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 444.0
PJS3_k127_6014434_12 Belongs to the binding-protein-dependent transport system permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 435.0
PJS3_k127_6014434_13 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 433.0
PJS3_k127_6014434_14 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K14981 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 391.0
PJS3_k127_6014434_15 Sugar (and other) transporter K07552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 389.0
PJS3_k127_6014434_16 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 334.0
PJS3_k127_6014434_17 Lysophospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002754 273.0
PJS3_k127_6014434_18 PTS system fructose IIA component K02793 - 2.7.1.191 0.00000000000000000000000000000000000000000000000000002148 192.0
PJS3_k127_6014434_19 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000005383 141.0
PJS3_k127_6014434_2 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 6.868e-264 823.0
PJS3_k127_6014434_20 Pyridoxamine 5'-phosphate oxidase K07226 - - 0.00000000000000000000000000000005534 130.0
PJS3_k127_6014434_21 COG1925 Phosphotransferase system, HPr-related proteins K11189 - - 0.00000000000000000000000002779 118.0
PJS3_k127_6014434_22 Protein conserved in bacteria - - - 0.00000000000000005309 83.0
PJS3_k127_6014434_23 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000696 82.0
PJS3_k127_6014434_24 - - - - 0.0000001188 64.0
PJS3_k127_6014434_3 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 3.139e-241 749.0
PJS3_k127_6014434_4 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 2.049e-221 702.0
PJS3_k127_6014434_5 SAF K00003 - 1.1.1.3 1.875e-197 624.0
PJS3_k127_6014434_6 Stimulus-sensing domain K14980 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 546.0
PJS3_k127_6014434_7 COG1541 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 460.0
PJS3_k127_6014434_8 Branched-chain amino acid ABC transporter, ATP-binding protein K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 449.0
PJS3_k127_6014434_9 Periplasmic binding protein K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 451.0
PJS3_k127_6015252_0 protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004716 525.0
PJS3_k127_6015252_1 Cell Wall Hydrolase - - - 0.000000000000000000000000000000000000000000000000000002258 198.0
PJS3_k127_6015252_2 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 0.000000000000000000000000000000000000000009367 154.0
PJS3_k127_6029345_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0 1102.0
PJS3_k127_6029345_1 Glycoside hydrolase - - - 1.259e-274 857.0
PJS3_k127_6029345_10 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009456 361.0
PJS3_k127_6029345_11 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007395 323.0
PJS3_k127_6029345_12 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K15546 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000693 300.0
PJS3_k127_6029345_13 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 291.0
PJS3_k127_6029345_14 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002571 279.0
PJS3_k127_6029345_15 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001359 273.0
PJS3_k127_6029345_16 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001285 263.0
PJS3_k127_6029345_17 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002836 250.0
PJS3_k127_6029345_18 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003412 241.0
PJS3_k127_6029345_19 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000001329 243.0
PJS3_k127_6029345_2 benzoyl-CoA oxygenase K15512 - 1.14.13.208 2.154e-271 841.0
PJS3_k127_6029345_20 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000001994 225.0
PJS3_k127_6029345_21 FR47-like protein - - - 0.00000000000000000000000000000000000000000000000000000000002019 213.0
PJS3_k127_6029345_22 Domain of unknown function (DUF4863) - - - 0.00000000000000000000000000000000000000000000000000000001325 204.0
PJS3_k127_6029345_23 Enoyl-CoA hydratase K01692,K08299 - 4.2.1.149,4.2.1.17 0.0000000000000000000000000000000000000000000004691 178.0
PJS3_k127_6029345_24 Thioesterase - - - 0.0000000000000000000000000000000009795 136.0
PJS3_k127_6029345_25 Domain of unknown function (DUF309) K09763 - - 0.000000000000000006256 89.0
PJS3_k127_6029345_26 Mo-molybdopterin cofactor metabolic process K03636 - - 0.000000000000001126 88.0
PJS3_k127_6029345_27 Protein of unknown function (DUF1499) - - - 0.00000000000006001 81.0
PJS3_k127_6029345_28 - - - - 0.00002442 53.0
PJS3_k127_6029345_3 enoyl-CoA hydratase K15513 - 4.1.2.44 3.124e-254 795.0
PJS3_k127_6029345_4 phenylacetic acid degradation protein K02618 - 1.2.1.91,3.3.2.12 1.264e-217 686.0
PJS3_k127_6029345_5 benzoate-CoA ligase K04105 - 6.2.1.25,6.2.1.27 1.108e-204 651.0
PJS3_k127_6029345_6 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 614.0
PJS3_k127_6029345_7 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 608.0
PJS3_k127_6029345_8 benzoyl-CoA oxygenase K15511 - 1.14.13.208 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 575.0
PJS3_k127_6029345_9 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 500.0
PJS3_k127_60480_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 4.657e-258 813.0
PJS3_k127_60480_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 5.421e-231 721.0
PJS3_k127_60480_10 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 377.0
PJS3_k127_60480_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008915 366.0
PJS3_k127_60480_12 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007176 312.0
PJS3_k127_60480_13 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 306.0
PJS3_k127_60480_14 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005844 297.0
PJS3_k127_60480_15 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 287.0
PJS3_k127_60480_16 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002412 278.0
PJS3_k127_60480_17 Lysin motif K06194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001671 274.0
PJS3_k127_60480_18 Phytoene squalene synthetase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000007169 252.0
PJS3_k127_60480_19 Sporulation related domain - - - 0.000000000000000000000000000000000000000000001425 177.0
PJS3_k127_60480_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007722 603.0
PJS3_k127_60480_20 Belongs to the HesB IscA family K13628,K15724 - - 0.0000000000000000000000000000000000000000001102 163.0
PJS3_k127_60480_21 Preprotein translocase subunit YajC K03210 - - 0.0000000000000000000000000000000003096 134.0
PJS3_k127_60480_22 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000007881 126.0
PJS3_k127_60480_23 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000002522 115.0
PJS3_k127_60480_24 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.00000000000000000000000004797 113.0
PJS3_k127_60480_25 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000000000000001195 108.0
PJS3_k127_60480_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 563.0
PJS3_k127_60480_4 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 556.0
PJS3_k127_60480_5 deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 470.0
PJS3_k127_60480_6 ATPase (AAA K06923 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 444.0
PJS3_k127_60480_7 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 429.0
PJS3_k127_60480_8 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 382.0
PJS3_k127_60480_9 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 378.0
PJS3_k127_6058985_0 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 343.0
PJS3_k127_6058985_1 Lysine exporter protein LysE YggA - - - 0.00000000000000000000000000000000000000000000000000000007883 201.0
PJS3_k127_6072866_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18989 - - 0.0 1183.0
PJS3_k127_6072866_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 6.766e-236 740.0
PJS3_k127_6072866_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 304.0
PJS3_k127_6072866_3 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000005062 169.0
PJS3_k127_6072866_4 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000001839 83.0
PJS3_k127_6098904_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 7.799e-224 708.0
PJS3_k127_6098904_1 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 1.009e-196 634.0
PJS3_k127_6098904_10 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 384.0
PJS3_k127_6098904_11 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005899 382.0
PJS3_k127_6098904_12 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 364.0
PJS3_k127_6098904_13 Essential cell division protein K03589 - - 0.00000000000000000000000000000000000000000000000000000000005647 214.0
PJS3_k127_6098904_14 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000000008516 158.0
PJS3_k127_6098904_16 - - - - 0.0000000000000005664 85.0
PJS3_k127_6098904_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 582.0
PJS3_k127_6098904_3 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 584.0
PJS3_k127_6098904_4 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 570.0
PJS3_k127_6098904_5 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 563.0
PJS3_k127_6098904_6 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 508.0
PJS3_k127_6098904_7 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000959 490.0
PJS3_k127_6098904_8 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005682 492.0
PJS3_k127_6098904_9 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 434.0
PJS3_k127_6107239_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 3.5e-323 995.0
PJS3_k127_6107239_1 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 503.0
PJS3_k127_6107239_2 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009622 435.0
PJS3_k127_6107239_3 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 409.0
PJS3_k127_6107239_4 COG2518 Protein-L-isoaspartate carboxylmethyltransferase K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000001207 238.0
PJS3_k127_6107239_5 Rhodanese Homology Domain - - - 0.000000000000000000000000004814 114.0
PJS3_k127_6107239_6 Domain of unknown function (DUF4864) - - - 0.00000000000000000000000006705 113.0
PJS3_k127_6107239_7 Ribonuclease B OB domain K03704 - - 0.000000000000000000000001101 108.0
PJS3_k127_6107239_8 - K08086,K09991 - - 0.0000002249 59.0
PJS3_k127_6107239_9 transferase activity, transferring glycosyl groups - - - 0.000001867 51.0
PJS3_k127_611245_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1349.0
PJS3_k127_611245_1 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 348.0
PJS3_k127_611245_2 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.000000000000000000000000000000000000000000000000000007047 204.0
PJS3_k127_611245_3 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000003765 177.0
PJS3_k127_611245_4 COG3591 V8-like Glu-specific endopeptidase K04775 - - 0.0000000000000000000000000000000005291 141.0
PJS3_k127_611245_5 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00001043 49.0
PJS3_k127_611245_6 - - - - 0.0001721 50.0
PJS3_k127_611245_7 ATPase activator activity K05801 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0051087,GO:0071944 - 0.0002469 51.0
PJS3_k127_6120776_0 Molybdopterin oxidoreductase Fe4S4 domain K21307 - 1.8.5.6 0.0 1431.0
PJS3_k127_6120776_1 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 561.0
PJS3_k127_6120776_2 4Fe-4S dicluster domain K00124,K21308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007334 392.0
PJS3_k127_6120776_3 DMSO reductase anchor subunit K21309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 304.0
PJS3_k127_6120776_4 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000004871 229.0
PJS3_k127_6120776_5 chromate transporter K07240 - - 0.000000000000000000000000000000000000000000000004758 177.0
PJS3_k127_6120776_6 Protein of unknown function (DUF1491) - - - 0.0000000000000000000000000000000005567 136.0
PJS3_k127_6120776_7 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.00000000000000000002004 93.0
PJS3_k127_6149657_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 6.865e-199 638.0
PJS3_k127_6149657_1 Domain of unknown function (DUF4147) K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000004314 245.0
PJS3_k127_6165380_0 Belongs to the GcvT family K00302 - 1.5.3.1 0.0 1278.0
PJS3_k127_6165380_1 FAD dependent oxidoreductase K00303 - 1.5.3.1 6.23e-217 679.0
PJS3_k127_6165380_2 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 514.0
PJS3_k127_6165380_3 Sarcosine oxidase, delta subunit family K00304 - 1.5.3.1 0.0000000000000000000000000000000000000008031 149.0
PJS3_k127_6165380_4 Sarcosine oxidase, gamma subunit family K00305 - 1.5.3.1 0.00000000000000000000000000000000000002486 151.0
PJS3_k127_6165380_5 - - - - 0.000000000000002581 81.0
PJS3_k127_6165380_6 LysE type translocator - - - 0.000003497 51.0
PJS3_k127_6282387_0 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 526.0
PJS3_k127_6282387_1 COG2186 Transcriptional regulators K05799,K14348 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007624 283.0
PJS3_k127_6282387_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002047 285.0
PJS3_k127_6282387_3 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000001127 190.0
PJS3_k127_6297385_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 2.31e-212 666.0
PJS3_k127_6297385_1 phosphomannomutase K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 582.0
PJS3_k127_6297385_2 UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 436.0
PJS3_k127_6297385_3 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004768 352.0
PJS3_k127_6297385_4 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007733 289.0
PJS3_k127_6297385_5 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000001741 213.0
PJS3_k127_6297385_6 DnaJ molecular chaperone homology domain - - - 0.00000000000000000000000000000000000000000000000000000003848 205.0
PJS3_k127_6297385_7 Pyrroline-5-carboxylate reductase K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000006178 166.0
PJS3_k127_6297385_8 COG1454 Alcohol dehydrogenase, class IV K00001,K00043 - 1.1.1.1,1.1.1.61 0.0000000001729 68.0
PJS3_k127_63026_0 Dihydroxyacetone kinase K00863 - 2.7.1.28,2.7.1.29,4.6.1.15 9.572e-274 852.0
PJS3_k127_63026_1 Bacterial extracellular solute-binding protein K02027 - - 8.54e-258 797.0
PJS3_k127_63026_10 - - - - 0.000000000000000000001639 100.0
PJS3_k127_63026_11 OmpA family - - - 0.00000000021 63.0
PJS3_k127_63026_12 Nucleoside-diphosphate-sugar epimerases K19073 - 1.3.1.75 0.0003638 46.0
PJS3_k127_63026_2 Belongs to the ABC transporter superfamily K10112 - - 3.95e-204 638.0
PJS3_k127_63026_3 ABC-type sugar transport systems permease components K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 587.0
PJS3_k127_63026_4 Binding-protein-dependent transport system inner membrane component K02026,K10229 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006557 547.0
PJS3_k127_63026_5 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 486.0
PJS3_k127_63026_6 Phospholipase D. Active site motifs. K06132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008684 484.0
PJS3_k127_63026_7 LacI family K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 402.0
PJS3_k127_63026_8 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030,K10001 - - 0.000000000000000000000000000000000000000000000000000000000000000007878 242.0
PJS3_k127_63026_9 TENA/THI-4/PQQC family K03707 - 3.5.99.2 0.0000000000000000000000000000000000001374 144.0
PJS3_k127_6358435_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 553.0
PJS3_k127_6358435_1 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989 473.0
PJS3_k127_6358435_2 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003613 286.0
PJS3_k127_6358435_3 MaoC like domain K14449 GO:0003674,GO:0003824,GO:0006082,GO:0006083,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017001,GO:0017144,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0045733,GO:0046395,GO:0071704,GO:0072329,GO:1901575 4.2.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000001438 243.0
PJS3_k127_64830_0 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 285.0
PJS3_k127_64830_1 Chromate transporter K07240 - - 0.00000000000000000000000000000000000000000000000000001393 198.0
PJS3_k127_64830_2 Polymer-forming cytoskeletal - - - 0.000000000000000000000007595 110.0
PJS3_k127_683117_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.82e-321 1005.0
PJS3_k127_683117_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 6.682e-263 818.0
PJS3_k127_683117_10 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000000000000005317 149.0
PJS3_k127_683117_11 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000664 150.0
PJS3_k127_683117_12 transcriptional - - - 0.000000000000000000000000000000000001346 148.0
PJS3_k127_683117_2 Participates in both transcription termination and antitermination K02600 - - 8.733e-238 745.0
PJS3_k127_683117_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 1.566e-204 643.0
PJS3_k127_683117_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 382.0
PJS3_k127_683117_5 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000895 376.0
PJS3_k127_683117_6 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000184 257.0
PJS3_k127_683117_7 nucleic-acid-binding protein implicated in transcription termination K07742 - - 0.0000000000000000000000000000000000000000000000000000001322 201.0
PJS3_k127_683117_8 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000136 200.0
PJS3_k127_683117_9 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000001258 187.0
PJS3_k127_730894_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1109.0
PJS3_k127_730894_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 1.783e-211 666.0
PJS3_k127_730894_10 COG1253 Hemolysins and related proteins containing CBS domains K06189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 362.0
PJS3_k127_730894_11 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005193 346.0
PJS3_k127_730894_12 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 353.0
PJS3_k127_730894_13 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 336.0
PJS3_k127_730894_14 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007345 336.0
PJS3_k127_730894_15 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005944 320.0
PJS3_k127_730894_16 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004234 311.0
PJS3_k127_730894_17 COG0694 Thioredoxin-like proteins and domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 290.0
PJS3_k127_730894_18 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003254 254.0
PJS3_k127_730894_19 May reduce toxic product malonic semialdehyde to 3- hydroxypropionic acid, which is excreted K09019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004233 250.0
PJS3_k127_730894_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000395 583.0
PJS3_k127_730894_20 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006606 247.0
PJS3_k127_730894_21 Putative transmembrane protein (Alph_Pro_TM) - - - 0.000000000000000000000000000000000000000000000000000000000000000000008667 250.0
PJS3_k127_730894_22 EVE domain - - - 0.000000000000000000000000000000000000000000000000000000000000001138 222.0
PJS3_k127_730894_23 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000000000000008612 218.0
PJS3_k127_730894_24 ROS/MUCR transcriptional regulator protein - - - 0.0000000000000000000000000000000000000000000000000000000002247 205.0
PJS3_k127_730894_25 COG1214 Inactive homolog of metal-dependent proteases K14742 - - 0.000000000000000000000000000000000000000000000000000000001595 208.0
PJS3_k127_730894_26 universal stress protein UspA and related nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000009698 197.0
PJS3_k127_730894_27 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000006895 195.0
PJS3_k127_730894_28 COG2010 Cytochrome c, mono- and diheme variants - - - 0.0000000000000000000000000000000000000000009183 160.0
PJS3_k127_730894_29 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000000000007241 161.0
PJS3_k127_730894_3 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 566.0
PJS3_k127_730894_30 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases - - - 0.00000000000000000000000000000001558 135.0
PJS3_k127_730894_31 Mitochondrial inner membrane protein - - - 0.000000000000000000000000000234 130.0
PJS3_k127_730894_32 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000006522 115.0
PJS3_k127_730894_33 FR47-like protein K03789 - 2.3.1.128 0.000000000000000000000001001 109.0
PJS3_k127_730894_34 Protein of unknown function (DUF1674) - - - 0.0000000000000582 77.0
PJS3_k127_730894_35 Belongs to the 'phage' integrase family - - - 0.0000000007993 60.0
PJS3_k127_730894_4 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 489.0
PJS3_k127_730894_5 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 474.0
PJS3_k127_730894_6 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 428.0
PJS3_k127_730894_7 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 427.0
PJS3_k127_730894_8 COG1702 Phosphate starvation-inducible protein PhoH K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 428.0
PJS3_k127_730894_9 HemY protein N-terminus K02498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 407.0
PJS3_k127_738082_0 Belongs to the UPF0753 family K09822 - - 2.489e-320 1001.0
PJS3_k127_738082_1 COG0480 Translation elongation factors (GTPases) K02355 - - 8.46e-248 784.0
PJS3_k127_738082_10 PFAM HTH transcriptional regulator, LysR K03717 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007836 372.0
PJS3_k127_738082_11 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 323.0
PJS3_k127_738082_12 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 300.0
PJS3_k127_738082_13 NUDIX domain K00949 - 2.7.6.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003773 283.0
PJS3_k127_738082_14 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000000001308 241.0
PJS3_k127_738082_15 Pentapeptide repeats (9 copies) - - - 0.000000000000000000000000000000000000000000000002838 181.0
PJS3_k127_738082_16 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000001041 138.0
PJS3_k127_738082_17 Transcriptional - GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000002156 126.0
PJS3_k127_738082_18 - - - - 0.000000000000000000002045 100.0
PJS3_k127_738082_19 - - - - 0.000000000000000000005388 96.0
PJS3_k127_738082_2 COG2873 O-acetylhomoserine sulfhydrylase - - - 1.592e-206 649.0
PJS3_k127_738082_20 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000000000001227 68.0
PJS3_k127_738082_3 NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit K00341,K05577 - 1.6.5.3 5.534e-205 651.0
PJS3_k127_738082_4 Permease family K03458 - - 1.163e-194 616.0
PJS3_k127_738082_5 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009523 580.0
PJS3_k127_738082_6 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 568.0
PJS3_k127_738082_7 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 492.0
PJS3_k127_738082_8 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 486.0
PJS3_k127_738082_9 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 430.0
PJS3_k127_749665_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 569.0
PJS3_k127_749665_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 348.0
PJS3_k127_769161_0 Belongs to the thiolase family K00626 - 2.3.1.9 7.568e-204 640.0
PJS3_k127_769161_1 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 444.0
PJS3_k127_769161_10 Glutathione S-transferase - - - 0.0000000000000000000000000000000000000000000000000006863 190.0
PJS3_k127_769161_11 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.000000000000000000000000000000000000245 159.0
PJS3_k127_769161_12 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000001436 80.0
PJS3_k127_769161_13 Protein of unknown function (DUF1761) - - - 0.00000001255 62.0
PJS3_k127_769161_2 alpha/beta hydrolase fold K03821 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005602 429.0
PJS3_k127_769161_3 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009401 401.0
PJS3_k127_769161_4 Acetoacetyl-CoA reductase K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 391.0
PJS3_k127_769161_5 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 372.0
PJS3_k127_769161_6 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001354 287.0
PJS3_k127_769161_7 Haloacid dehalogenase-like hydrolase K07025 - - 0.0000000000000000000000000000000000000000000000000000000000000006369 228.0
PJS3_k127_769161_8 Polyhydroxyalkanoate synthesis repressor PhaR - - - 0.000000000000000000000000000000000000000000000000000000001019 208.0
PJS3_k127_769161_9 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000000000000000000000004041 196.0
PJS3_k127_847512_0 COG1982 Arginine lysine ornithine decarboxylases K01584 - 4.1.1.19 0.0 1163.0
PJS3_k127_847512_1 Biotin carboxylase - - - 2.627e-237 742.0
PJS3_k127_847512_10 Peroxiredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000002575 227.0
PJS3_k127_847512_11 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000002989 232.0
PJS3_k127_847512_12 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000005674 176.0
PJS3_k127_847512_13 - - - - 0.0000000000000000000001496 98.0
PJS3_k127_847512_14 PFAM Sporulation - - - 0.0000004277 62.0
PJS3_k127_847512_2 Tripartite ATP-independent periplasmic transporter, DctM component K11690 GO:0005575,GO:0016020,GO:0016021,GO:0031224,GO:0044425 - 4.411e-233 727.0
PJS3_k127_847512_3 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 510.0
PJS3_k127_847512_4 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K01826 - 5.3.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 396.0
PJS3_k127_847512_5 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00019 - 1.1.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008768 375.0
PJS3_k127_847512_6 choloylglycine hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009218 371.0
PJS3_k127_847512_7 Belongs to the hyi family K01816 - 5.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 299.0
PJS3_k127_847512_8 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 297.0
PJS3_k127_847512_9 Tripartite ATP-independent periplasmic transporters, DctQ component K11689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002686 244.0
PJS3_k127_849811_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 1.918e-213 666.0
PJS3_k127_849811_1 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 487.0
PJS3_k127_849811_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 447.0
PJS3_k127_849811_3 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007972 407.0
PJS3_k127_849811_4 Belongs to the thioredoxin family K03671 - - 0.00000000000009058 70.0
PJS3_k127_849813_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 3.811e-203 639.0
PJS3_k127_849813_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007966 386.0
PJS3_k127_849813_2 Ornithine cyclodeaminase/mu-crystallin family K01750,K19743 - 1.5.1.1,4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 323.0
PJS3_k127_849813_3 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008524 318.0
PJS3_k127_849813_4 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001054 279.0
PJS3_k127_849813_5 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.0000000000000000000000000000000000000000001266 163.0
PJS3_k127_849813_6 Lipopolysaccharide assembly protein A domain - - - 0.000000000000000000004982 96.0
PJS3_k127_854064_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01907 - 6.2.1.16 2.445e-308 957.0
PJS3_k127_854064_1 Belongs to the UbiD family K03182 - 4.1.1.98 1.2e-285 885.0
PJS3_k127_854064_10 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 422.0
PJS3_k127_854064_11 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006952 430.0
PJS3_k127_854064_12 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000551 352.0
PJS3_k127_854064_13 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 326.0
PJS3_k127_854064_14 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006143 319.0
PJS3_k127_854064_15 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009546 302.0
PJS3_k127_854064_16 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003013 263.0
PJS3_k127_854064_17 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000000000000000194 248.0
PJS3_k127_854064_18 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001045 233.0
PJS3_k127_854064_19 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.000000000000000000000000000000000000000000000000000000000004481 219.0
PJS3_k127_854064_2 ABC-type multidrug transport system, ATPase and permease K06147,K11085 - - 3.914e-218 692.0
PJS3_k127_854064_20 COG1560 Lauroyl myristoyl acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000002037 216.0
PJS3_k127_854064_21 PFAM thioesterase superfamily protein K07107 - - 0.000000000000000000000000000000000000000000000000000009412 194.0
PJS3_k127_854064_22 protein conserved in bacteria K09778 - - 0.0000000000000000000000000000000000000000000000000001009 197.0
PJS3_k127_854064_23 Bacterial regulatory proteins, tetR family K16137 - - 0.00000000000000000000000000000000000000006005 158.0
PJS3_k127_854064_24 of membrane protease K07340 - - 0.0000000000000000000000000000000000000002686 153.0
PJS3_k127_854064_25 Domain of unknown function (DUF4170) - - - 0.00000000000000000000001911 102.0
PJS3_k127_854064_26 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.0000000000000000004492 87.0
PJS3_k127_854064_3 A circularly permuted ATPgrasp - - - 2.27e-215 678.0
PJS3_k127_854064_4 Threonine synthase K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 592.0
PJS3_k127_854064_5 Zn-dependent proteases and their inactivated homologs K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 572.0
PJS3_k127_854064_6 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004764 485.0
PJS3_k127_854064_7 3-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004622 456.0
PJS3_k127_854064_8 Amidase K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005437 445.0
PJS3_k127_854064_9 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 432.0
PJS3_k127_857849_0 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 373.0
PJS3_k127_857849_1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003028 352.0
PJS3_k127_857849_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 312.0
PJS3_k127_857849_3 Sulfotransferase domain - - - 0.00000000000000000000002387 102.0
PJS3_k127_861672_0 COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K04090 - 1.2.7.8 0.0 1583.0
PJS3_k127_861672_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1166.0
PJS3_k127_861672_10 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038,K21977 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 539.0
PJS3_k127_861672_11 Cysteine synthase K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 469.0
PJS3_k127_861672_12 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452 447.0
PJS3_k127_861672_13 MotA TolQ ExbB proton channel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 438.0
PJS3_k127_861672_14 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K15553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006683 426.0
PJS3_k127_861672_15 flagellar motor protein K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 435.0
PJS3_k127_861672_16 Rieske 2Fe-2S domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 398.0
PJS3_k127_861672_17 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 401.0
PJS3_k127_861672_18 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 371.0
PJS3_k127_861672_19 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 367.0
PJS3_k127_861672_2 COG2217 Cation transport ATPase K01533 - 3.6.3.4 3.939e-281 883.0
PJS3_k127_861672_20 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 336.0
PJS3_k127_861672_21 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K15554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 337.0
PJS3_k127_861672_22 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 319.0
PJS3_k127_861672_23 Uracil-DNA glycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 299.0
PJS3_k127_861672_24 ABC transporter K15555 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 288.0
PJS3_k127_861672_25 divalent heavy-metal cations transporter K07238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000134 282.0
PJS3_k127_861672_26 NDP-hexose 2,3-dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000271 282.0
PJS3_k127_861672_27 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005056 268.0
PJS3_k127_861672_28 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003333 248.0
PJS3_k127_861672_29 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004422 254.0
PJS3_k127_861672_3 oligoendopeptidase F K08602 - - 1.387e-274 856.0
PJS3_k127_861672_30 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000005847 233.0
PJS3_k127_861672_31 COG2030 Acyl dehydratase K17865 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016043,GO:0016829,GO:0016835,GO:0016836,GO:0022607,GO:0042620,GO:0042621,GO:0043933,GO:0044085,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901576 4.2.1.55 0.00000000000000000000000000000000000000000000000000000000000000000445 228.0
PJS3_k127_861672_32 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.000000000000000000000000000000000000000000000000000000000000001553 225.0
PJS3_k127_861672_33 of the double-stranded beta helix - - - 0.00000000000000000000000000000000000000000000000000000000000003489 223.0
PJS3_k127_861672_34 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000000000000000000009417 216.0
PJS3_k127_861672_35 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000006811 199.0
PJS3_k127_861672_36 Zincin-like metallopeptidase - - - 0.000000000000000000000000000000000000000000000000000009118 193.0
PJS3_k127_861672_37 MOSC domain - - - 0.000000000000000000000000000000000000000000000000002694 188.0
PJS3_k127_861672_38 Protein of unknown function (DUF3137) - - - 0.00000000000000000000000000000000000000000000001592 183.0
PJS3_k127_861672_39 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000003624 170.0
PJS3_k127_861672_4 COG0457 FOG TPR repeat - - - 4.552e-258 805.0
PJS3_k127_861672_40 bond formation protein, DsbB - - - 0.000000000000000000000000000000000000000001496 161.0
PJS3_k127_861672_41 Protein of unknown function (DUF1232) - - - 0.000000000000000000000000000000000003531 141.0
PJS3_k127_861672_42 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000007114 138.0
PJS3_k127_861672_43 FixH - - - 0.0000000000000000000000000000001198 132.0
PJS3_k127_861672_44 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000000004863 113.0
PJS3_k127_861672_45 Protein of unknown function (DUF3429) - - - 0.0000000000000000000001355 104.0
PJS3_k127_861672_46 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000007637 104.0
PJS3_k127_861672_47 - - - - 0.0000000000000000004354 94.0
PJS3_k127_861672_48 cytochrome oxidase maturation protein - - - 0.000000000000001017 84.0
PJS3_k127_861672_49 lipolytic protein G-D-S-L family - - - 0.000000000000002901 87.0
PJS3_k127_861672_5 AMP-binding enzyme K01897 - 6.2.1.3 9.297e-236 742.0
PJS3_k127_861672_50 COG2885 outer membrane protein and related peptidoglycan-associated (lipo)proteins - - - 0.000000000000003107 87.0
PJS3_k127_861672_51 B12-binding - - - 0.000008192 54.0
PJS3_k127_861672_6 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 1.791e-205 649.0
PJS3_k127_861672_7 Nitrogen fixation protein fixG - - - 3.895e-199 632.0
PJS3_k127_861672_8 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 559.0
PJS3_k127_861672_9 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 537.0
PJS3_k127_887379_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2398.0
PJS3_k127_887379_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0006355,GO:0006464,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:1901564,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 0.0 1173.0
PJS3_k127_887379_10 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 307.0
PJS3_k127_887379_11 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000004743 250.0
PJS3_k127_887379_12 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.000000000000000000000000000000000000000000000000000000000000000000007722 236.0
PJS3_k127_887379_13 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002696 237.0
PJS3_k127_887379_14 Protein conserved in bacteria K09774 - - 0.00000000000000000000000000000000000000000000000000000000000000000136 237.0
PJS3_k127_887379_15 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000000000000000000000000000000000000000000002465 207.0
PJS3_k127_887379_16 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.0000000000000000000000000000008646 130.0
PJS3_k127_887379_17 Protein of unknown function (FYDLN_acid) - - - 0.00000000000001353 81.0
PJS3_k127_887379_18 Protein of unknown function (DUF1150) - - - 0.00000000004284 65.0
PJS3_k127_887379_19 Glycosyltransferase family 87 - - - 0.0000002157 63.0
PJS3_k127_887379_2 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases K00266 - 1.4.1.13,1.4.1.14 1.39e-244 762.0
PJS3_k127_887379_3 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 3.079e-219 685.0
PJS3_k127_887379_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 586.0
PJS3_k127_887379_5 ABC transporter, ATP-binding protein K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005266 413.0
PJS3_k127_887379_6 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009197 413.0
PJS3_k127_887379_7 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006628 381.0
PJS3_k127_887379_8 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 349.0
PJS3_k127_887379_9 3-5 exonuclease K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 313.0
PJS3_k127_948159_0 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 6.403e-194 629.0
PJS3_k127_948159_1 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 593.0
PJS3_k127_948159_2 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000871 387.0
PJS3_k127_948159_3 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 347.0
PJS3_k127_948159_4 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004762 296.0
PJS3_k127_948159_5 Predicted permease YjgP/YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005826 302.0
PJS3_k127_948159_6 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004039 289.0
PJS3_k127_948159_7 Chaperone SurA K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000105 284.0
PJS3_k127_952069_0 Belongs to the GcvT family K00302,K22086 - 1.5.3.1,1.5.99.5 1e-323 1020.0
PJS3_k127_952069_1 sarcosine oxidase, beta subunit K00303,K22084 - 1.5.3.1,1.5.99.5 9.279e-194 612.0
PJS3_k127_952069_2 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 316.0
PJS3_k127_952069_3 Helix-turn-helix domain, rpiR family - - - 0.0000000000000000000000000000000000000000000001592 179.0
PJS3_k127_952069_4 Sarcosine oxidase, delta subunit K00304,K22085 - 1.5.3.1,1.5.99.5 0.0000000000000000000000000007207 127.0
PJS3_k127_984353_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1365.0
PJS3_k127_984353_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 318.0
PJS3_k127_984353_2 Putative 2OG-Fe(II) oxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005057 257.0
PJS3_k127_984353_3 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000002203 231.0
PJS3_k127_984353_4 Evidence 4 Homologs of previously reported genes of K09700 - - 0.000000000000000000000000000002526 126.0
PJS3_k127_984353_5 - - - - 0.000000000000000000003019 96.0
PJS3_k127_984353_6 Cytochrome C' - - - 0.00000000001275 70.0
PJS3_k127_990351_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K16871 - 2.6.1.96 5.946e-217 683.0
PJS3_k127_990351_1 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 542.0
PJS3_k127_990351_2 5-aminolevulinic acid synthase K00643 - 2.3.1.37 0.00000000000000000000000000000000000000000001953 163.0
PJS3_k127_990351_3 Universal stress protein family - - - 0.000000000000000000000000000000000001234 145.0