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Overview

ID MAG03119
Name PJS3_bin.69
Sample SMP0072
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Alphaproteobacteria
Order UBA8366
Family GCA-2696645
Genus
Species
Assembly information
Completeness (%) 56.22
Contamination (%) 0.23
GC content (%) 63.0
N50 (bp) 4,339
Genome size (bp) 1,814,827

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1856

Gene name Description KEGG GOs EC E-value Score Sequence
PJS3_k127_100015_0 Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005534 333.0
PJS3_k127_100015_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 286.0
PJS3_k127_100015_2 - - - - 0.000000095 59.0
PJS3_k127_100015_3 - - - - 0.0003668 48.0
PJS3_k127_101170_0 Phytanoyl-CoA dioxygenase (PhyH) K10674 - 1.14.11.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 458.0
PJS3_k127_101170_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004953 458.0
PJS3_k127_101170_2 homoserine dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 288.0
PJS3_k127_101936_0 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K21826 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000798 381.0
PJS3_k127_101936_1 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 308.0
PJS3_k127_101936_2 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.0000003583 51.0
PJS3_k127_1045847_0 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 295.0
PJS3_k127_1045847_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007702 256.0
PJS3_k127_1045847_2 membrane - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000001632 70.0
PJS3_k127_1047387_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 9.378e-247 786.0
PJS3_k127_1047387_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 528.0
PJS3_k127_1049192_0 Mg2 and Co2 transporter CorB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 508.0
PJS3_k127_1049192_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000001222 237.0
PJS3_k127_1049192_2 Protein of unknown function (DUF2889) - - - 0.0000000000000000000000000000000000000000000000000000000000000208 223.0
PJS3_k127_1049192_3 Transcriptional regulator - - - 0.000002042 52.0
PJS3_k127_1058047_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 551.0
PJS3_k127_1058047_1 phosphomannomutase K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 537.0
PJS3_k127_1058047_2 UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 394.0
PJS3_k127_1058047_3 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001394 286.0
PJS3_k127_1058047_4 Tellurite resistance protein TerB K05801 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001464 284.0
PJS3_k127_1058047_5 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002213 284.0
PJS3_k127_1058047_6 DnaJ molecular chaperone homology domain - - - 0.00000000000000000000000000000000000000002948 163.0
PJS3_k127_1058047_7 HAD-hyrolase-like K01091 - 3.1.3.18 0.0000000000009653 72.0
PJS3_k127_1089797_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 385.0
PJS3_k127_1089797_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 345.0
PJS3_k127_1089797_2 Biotin/lipoate A/B protein ligase family - - - 0.00000000000000000000000000000000000000001316 163.0
PJS3_k127_1089797_3 Evidence 4 Homologs of previously reported genes of - - - 0.00000000007165 73.0
PJS3_k127_1098233_0 LUD domain K18929 - - 6.899e-220 690.0
PJS3_k127_1098233_1 membrane-bound lytic murein transglycosylase K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009004 391.0
PJS3_k127_1098233_10 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 GO:0002790,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.00000000000000000000000000000001836 133.0
PJS3_k127_1098233_11 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000003265 119.0
PJS3_k127_1098233_2 (Fe-S) oxidoreductase K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 362.0
PJS3_k127_1098233_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 314.0
PJS3_k127_1098233_4 LUD domain K00782 - - 0.0000000000000000000000000000000000000000000000000000000000000002536 231.0
PJS3_k127_1098233_5 Belongs to the phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000000001354 203.0
PJS3_k127_1098233_6 Tim44 - - - 0.00000000000000000000000000000000000000000000000000001228 197.0
PJS3_k127_1098233_7 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000000001112 184.0
PJS3_k127_1098233_8 protein conserved in bacteria - - - 0.000000000000000000000000000000000000009919 153.0
PJS3_k127_1098233_9 COG3030 Protein affecting phage T7 exclusion by the F plasmid K07113 - - 0.000000000000000000000000000000000001716 147.0
PJS3_k127_1140021_0 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 397.0
PJS3_k127_1140021_1 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.000000000000000000000000000000000000001366 167.0
PJS3_k127_1140021_2 3'-5' exonuclease K03684 - 3.1.13.5 0.00000000000000000000000005137 108.0
PJS3_k127_1147129_0 Glutathione S-transferase K07393 GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016491,GO:0016667,GO:0016672,GO:0016740,GO:0016765,GO:0042221,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.8.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 515.0
PJS3_k127_1147129_1 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000224 243.0
PJS3_k127_116228_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 528.0
PJS3_k127_116228_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 520.0
PJS3_k127_116228_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 348.0
PJS3_k127_116228_3 Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP K00868 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008478,GO:0008614,GO:0008615,GO:0008902,GO:0009058,GO:0009108,GO:0009110,GO:0009443,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019842,GO:0030170,GO:0030955,GO:0031420,GO:0034641,GO:0036094,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0046872,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.7.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 314.0
PJS3_k127_116228_4 Putative bacterial sensory transduction regulator - - - 0.000000000000000000000000000000000000000000000000000000000009917 214.0
PJS3_k127_116228_5 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 - - 0.000000000000000000000000000000000000000000004314 167.0
PJS3_k127_116228_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000004259 136.0
PJS3_k127_116525_0 ABC-type Fe3 transport system permease component K02011 - - 1.155e-232 734.0
PJS3_k127_116525_1 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008418 494.0
PJS3_k127_116525_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02052 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009362 471.0
PJS3_k127_116525_3 alpha beta - - - 0.00000000000000000000000000002621 128.0
PJS3_k127_116525_4 Transcriptional regulator, DeoR family - - - 0.000000000000000000000000001304 124.0
PJS3_k127_1175236_0 ABC-type sugar transport system periplasmic component K05813 - - 2.099e-246 765.0
PJS3_k127_1175236_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 591.0
PJS3_k127_1175236_2 COG1175 ABC-type sugar transport systems, permease components K05814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 544.0
PJS3_k127_1183713_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 321.0
PJS3_k127_1183713_1 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 319.0
PJS3_k127_1183713_2 COG2893 Phosphotransferase system, mannose fructose-specific component IIA K02793 - 2.7.1.191 0.00000000000000000000000000000000000000000000000000000000005027 206.0
PJS3_k127_1183713_3 phosphocarrier protein HPr K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006808,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0044424,GO:0044464,GO:0050789,GO:0051179,GO:0051234,GO:0065007,GO:0071702 - 0.00000000000000000000002816 105.0
PJS3_k127_1183713_4 Serine kinase of the HPr protein regulates carbohydrate metabolism K06023 - - 0.00000003507 56.0
PJS3_k127_1194982_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007091 443.0
PJS3_k127_1194982_1 NAD dependent epimerase/dehydratase family K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803 388.0
PJS3_k127_1194982_2 COG0471 Di- and tricarboxylate transporters - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 384.0
PJS3_k127_1194982_3 Universal stress protein UspA - - - 0.000000000000000000000000000000000000000000000000000000000000000007888 235.0
PJS3_k127_1208602_0 OHCU decarboxylase K00365,K01452 - 1.7.3.3,3.5.1.41 3.4e-230 723.0
PJS3_k127_1208602_1 Cupin domain K14977 - 3.5.3.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 457.0
PJS3_k127_1208602_2 Ureidoglycolate lyase K01483 - 4.3.2.3 0.000000000000000000000000000000000003818 143.0
PJS3_k127_1218043_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18989 - - 1.358e-195 625.0
PJS3_k127_1218043_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000002064 73.0
PJS3_k127_123522_0 protein conserved in bacteria K09989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006056 424.0
PJS3_k127_123522_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000006864 151.0
PJS3_k127_125131_0 Aminotransferase class-III - - - 5.177e-195 623.0
PJS3_k127_125131_1 Pfam:Kce - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 307.0
PJS3_k127_125131_2 TRAP transporter, solute receptor (TAXI family K07080 - - 0.00000000000000000000000000000000002618 145.0
PJS3_k127_125131_3 ABC-type transport auxiliary lipoprotein component K18480 - - 0.0000000000001056 72.0
PJS3_k127_1279159_0 Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 417.0
PJS3_k127_1279159_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000003192 248.0
PJS3_k127_1279159_2 COG2030 Acyl dehydratase K17865 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016043,GO:0016829,GO:0016835,GO:0016836,GO:0022607,GO:0042620,GO:0042621,GO:0043933,GO:0044085,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901576 4.2.1.55 0.000000000000000000000000000000000000000000000000000003984 196.0
PJS3_k127_1319743_0 TonB-dependent receptor K16092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 493.0
PJS3_k127_1319743_1 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000009546 176.0
PJS3_k127_1323935_0 AMP-binding enzyme C-terminal domain K00666 - - 2.898e-238 749.0
PJS3_k127_1323935_1 Spermidine putrescine-binding periplasmic protein K02055 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 521.0
PJS3_k127_1323935_2 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 485.0
PJS3_k127_1323935_3 Binding-protein-dependent transport system inner membrane component K02053 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000721 405.0
PJS3_k127_1323935_4 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004587 244.0
PJS3_k127_1323935_5 Putative AphA-like transcriptional regulator - - - 0.00000000000000000000000000000000000000000000665 168.0
PJS3_k127_1323967_0 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007907 352.0
PJS3_k127_1323967_1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001062 268.0
PJS3_k127_1323967_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K11177 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016903,GO:0030151,GO:0033554,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000004267 220.0
PJS3_k127_1326663_0 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 511.0
PJS3_k127_1326663_1 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 422.0
PJS3_k127_1334420_0 Belongs to the peptidase S16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 315.0
PJS3_k127_1334420_1 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000002771 248.0
PJS3_k127_1334420_2 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001716 249.0
PJS3_k127_1340096_0 TRAP transporter, 4TM 12TM fusion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004642 346.0
PJS3_k127_1340096_1 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 332.0
PJS3_k127_1340096_2 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000000000000000000000000000000002067 160.0
PJS3_k127_1340096_3 small membrane protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000003861 85.0
PJS3_k127_1353560_0 aminopeptidase N K01256 - 3.4.11.2 0.0 1048.0
PJS3_k127_1353560_1 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 1.407e-215 672.0
PJS3_k127_1353560_2 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003975 363.0
PJS3_k127_1353560_3 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000004381 251.0
PJS3_k127_1353560_4 HpcH/HpaI aldolase/citrate lyase family K02510 - 4.1.2.52 0.000000000000000000000000000000000000000000000000000001052 205.0
PJS3_k127_1353560_5 Domain of unknown function (DUF427) - - - 0.000000000000000000006185 97.0
PJS3_k127_1353560_6 Scp-like extracellular - - - 0.0000000000006563 70.0
PJS3_k127_1374451_0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K03821 - - 1.458e-278 868.0
PJS3_k127_1374451_1 KR domain K07535 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 347.0
PJS3_k127_1374451_2 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K07536 - - 0.0000000000000000000000000000000000000000005297 158.0
PJS3_k127_1374451_3 OmpA family - - - 0.0000000000000000000000007993 117.0
PJS3_k127_1377373_0 Flavodoxin-like fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009796 264.0
PJS3_k127_1377373_1 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000000001158 236.0
PJS3_k127_1377373_2 (twin-arginine translocation) pathway signal - - - 0.00000000000000000000000000000000000000000000000000000001811 203.0
PJS3_k127_1377373_3 Transcriptional regulator, DeoR family - - - 0.0000000000000000000000000000000000000000001001 164.0
PJS3_k127_1377373_4 Creatinase/Prolidase N-terminal domain - - - 0.00000000000000000000000004961 107.0
PJS3_k127_1377373_5 CAAX protease self-immunity K07052 - - 0.0000000000000000000002971 108.0
PJS3_k127_1388413_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0030060,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 527.0
PJS3_k127_1388413_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007956 473.0
PJS3_k127_1388413_2 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 407.0
PJS3_k127_1388413_3 Domain of unknown function (DUF4160) - - - 0.0000000000001404 72.0
PJS3_k127_1392195_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 5.936e-222 695.0
PJS3_k127_1392195_1 ABC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009799 599.0
PJS3_k127_1392195_2 NAD(P) transhydrogenase, alpha subunit K00324 GO:0000166,GO:0003674,GO:0003824,GO:0003957,GO:0005215,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006740,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0008746,GO:0008750,GO:0009117,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015672,GO:0016491,GO:0016651,GO:0016652,GO:0019362,GO:0019637,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046496,GO:0046983,GO:0048037,GO:0050662,GO:0051179,GO:0051186,GO:0051234,GO:0051287,GO:0055085,GO:0055086,GO:0055114,GO:0070403,GO:0070404,GO:0071704,GO:0072524,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902600 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 455.0
PJS3_k127_1392195_3 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007916 375.0
PJS3_k127_1392195_4 homocysteine S-methyltransferase K00547 - 2.1.1.10 0.00000000000000000000000000000000000000009362 152.0
PJS3_k127_1392195_5 COG3288 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.000000000000000000000000000000000000002813 150.0
PJS3_k127_1397313_0 Participates in both transcription termination and antitermination K02600 - - 1.058e-217 687.0
PJS3_k127_1397313_1 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000001095 251.0
PJS3_k127_1397313_2 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000000000000000000102 196.0
PJS3_k127_1402964_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007133 507.0
PJS3_k127_1402964_1 anion transporter K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 470.0
PJS3_k127_1402964_2 Quinone oxidoreductase K00001,K00344 - 1.1.1.1,1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 304.0
PJS3_k127_1402964_3 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000002212 184.0
PJS3_k127_1416788_0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K12972 - 1.1.1.79,1.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001051 282.0
PJS3_k127_1416788_1 Protein of unknown function DUF115 - - - 0.000000000000000000000000000000000000000337 163.0
PJS3_k127_1416788_2 Glycosyl transferase 4-like - - - 0.0000000000000001576 85.0
PJS3_k127_1428416_0 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 320.0
PJS3_k127_1428416_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 313.0
PJS3_k127_1428416_2 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000003347 231.0
PJS3_k127_1436008_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 447.0
PJS3_k127_1436008_1 ribosomal protein L11 K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000584 244.0
PJS3_k127_1436008_2 AsmA family K07289,K07290 - - 0.000000000000000000000000000000007087 147.0
PJS3_k127_1451180_0 Formate dehydrogenase subunit alpha - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 301.0
PJS3_k127_1451180_1 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000128 208.0
PJS3_k127_1451180_2 PilZ domain - - - 0.000008218 53.0
PJS3_k127_1467615_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 1.898e-230 718.0
PJS3_k127_1467615_1 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 502.0
PJS3_k127_1467615_2 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001874 279.0
PJS3_k127_1467615_3 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000004025 187.0
PJS3_k127_1467615_4 Histidine phosphatase superfamily (branch 1) - - - 0.00000000000000000000000000000000000000000000000001724 188.0
PJS3_k127_1472428_0 Belongs to the DegT DnrJ EryC1 family K07806 - 2.6.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000604 356.0
PJS3_k127_1472428_1 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000000003559 109.0
PJS3_k127_1472428_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000114 74.0
PJS3_k127_1514605_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071496 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004262 377.0
PJS3_k127_1514605_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000007749 160.0
PJS3_k127_1514605_2 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000006559 112.0
PJS3_k127_1528439_0 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 488.0
PJS3_k127_1528439_1 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 365.0
PJS3_k127_1528439_2 Thioesterase K07107,K12500 - - 0.0000000000000000001258 96.0
PJS3_k127_1528561_0 COG2873 O-acetylhomoserine sulfhydrylase K01738,K01740 - 2.5.1.47,2.5.1.49 6.724e-199 628.0
PJS3_k127_1528561_1 GTP cyclohydrolase K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 286.0
PJS3_k127_1528561_2 NifU-like N terminal domain - - - 0.000000000000000000000000000000001503 134.0
PJS3_k127_1536886_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 2.78e-242 753.0
PJS3_k127_1536886_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 307.0
PJS3_k127_1536886_2 Saccharopine dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000157 278.0
PJS3_k127_1536886_3 Modulates RecA activity K03565 - - 0.000000000000000000000000000000000000000000000717 173.0
PJS3_k127_1536886_4 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000000000000000000000004442 134.0
PJS3_k127_1541066_0 Belongs to the binding-protein-dependent transport system permease family K01997,K01998 - - 1.708e-215 686.0
PJS3_k127_1541066_1 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 556.0
PJS3_k127_1541066_2 COG0534 Na -driven multidrug efflux pump K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009331 383.0
PJS3_k127_1541066_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 287.0
PJS3_k127_1541066_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003539 284.0
PJS3_k127_1541066_5 Catalyzes the formation of succinate from succinate semialdehyde K00135 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004777,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006105,GO:0006520,GO:0006536,GO:0006538,GO:0006540,GO:0006553,GO:0006554,GO:0006807,GO:0008150,GO:0008152,GO:0009013,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009066,GO:0009068,GO:0009448,GO:0009450,GO:0009987,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0019477,GO:0019752,GO:0032787,GO:0036094,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0046440,GO:0047949,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007931 277.0
PJS3_k127_1541066_6 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002787 277.0
PJS3_k127_1541066_7 Protein of unknown function (DUF3572) - - - 0.000000000000000005592 89.0
PJS3_k127_1543189_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 1.962e-199 627.0
PJS3_k127_1543189_1 acyl-CoA transferases carnitine dehydratase K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 561.0
PJS3_k127_158459_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007999 550.0
PJS3_k127_158459_1 ATPases associated with a variety of cellular activities K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 406.0
PJS3_k127_158459_2 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.000000000000000000000000000000000000000000000000000000000000000001048 230.0
PJS3_k127_158459_3 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase - - - 0.0000000000000000000000000000000000000000000000000000000006313 208.0
PJS3_k127_158459_4 Belongs to the small heat shock protein (HSP20) family - - - 0.00000000000000000000000000000000000000000000000000002693 191.0
PJS3_k127_158459_5 OstA-like protein K09774 - - 0.0000000000000000000000000000000000006182 144.0
PJS3_k127_158459_6 Protein of unknown function (DUF1150) - - - 0.0009201 45.0
PJS3_k127_1585544_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004163 291.0
PJS3_k127_1585544_1 Adenylate cyclase - - - 0.000000000004841 74.0
PJS3_k127_1596313_0 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 403.0
PJS3_k127_1596313_1 arsR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 295.0
PJS3_k127_1596313_2 COG0655 Multimeric flavodoxin WrbA - - - 0.000000000000000000000000000000000000000000000000000000000002065 215.0
PJS3_k127_159953_0 Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide K00376 - 1.7.2.4 0.0 1099.0
PJS3_k127_159953_1 FMN_bind K19339 - - 2.807e-242 763.0
PJS3_k127_1615364_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 1.305e-206 654.0
PJS3_k127_1615364_1 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005104 249.0
PJS3_k127_1615364_2 Transcriptional K19591 - - 0.0000000000000000000000000000000000000000000002585 174.0
PJS3_k127_1615364_3 COG2010 Cytochrome c, mono- and diheme variants - - - 0.000000000000000000000000000000000000000001903 163.0
PJS3_k127_1615364_4 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000006755 152.0
PJS3_k127_1615364_5 Ribbon-helix-helix domain - - - 0.0000000000000000007782 89.0
PJS3_k127_1615364_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000006896 78.0
PJS3_k127_1623925_0 COG0694 Thioredoxin-like proteins and domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001511 279.0
PJS3_k127_1623925_1 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000004393 249.0
PJS3_k127_1623925_2 Universal stress protein - - - 0.00000000000000000000000000000000000000004654 155.0
PJS3_k127_1623925_3 FlgJ-related protein K03796 - - 0.00000000000000000000000000000001003 138.0
PJS3_k127_1623925_4 FlgJ-related protein K03796 - - 0.000000000000000000000000004672 113.0
PJS3_k127_1635225_0 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006005 464.0
PJS3_k127_1635225_1 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 438.0
PJS3_k127_1649275_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 3.387e-222 704.0
PJS3_k127_1649275_1 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008489 403.0
PJS3_k127_1649275_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004319 277.0
PJS3_k127_1649275_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000006665 225.0
PJS3_k127_1649275_4 Sporulation related domain - - - 0.000000000000000000000000001648 124.0
PJS3_k127_1651080_0 hydrolase of the metallo-beta-lactamase superfamily K12574 - - 3.217e-214 679.0
PJS3_k127_1651080_1 Methyladenine glycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003766 259.0
PJS3_k127_1651080_2 methylmalonyl-CoA epimerase K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000003956 248.0
PJS3_k127_1651080_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000771 204.0
PJS3_k127_1651080_4 Protein of unknown function (DUF1467) - - - 0.000000000000162 75.0
PJS3_k127_1651155_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 483.0
PJS3_k127_1651155_1 hmm pf06808 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006087 459.0
PJS3_k127_1651155_2 COG3090 TRAP-type C4-dicarboxylate transport system small permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000002184 234.0
PJS3_k127_1651155_3 N-methylhydantoinase A acetone carboxylase, beta subunit K01469 - 3.5.2.9 0.0000000000000000000000005489 105.0
PJS3_k127_1659473_0 Acetylornithine aminotransferase K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 397.0
PJS3_k127_1659473_1 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006895 359.0
PJS3_k127_1659473_2 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 342.0
PJS3_k127_1659473_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001289 282.0
PJS3_k127_1659473_4 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000009563 158.0
PJS3_k127_1659473_5 L-asparaginase II - - - 0.0000000000000000000000000000003708 125.0
PJS3_k127_1695015_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.015e-272 855.0
PJS3_k127_1695015_1 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004533 257.0
PJS3_k127_1695015_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000003651 124.0
PJS3_k127_1695015_3 Flavinator of succinate dehydrogenase K09159 - - 0.00000000000000009918 85.0
PJS3_k127_1698631_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000006459 270.0
PJS3_k127_1698631_1 Haemolysin-III related K11068 - - 0.000000000000000000000000000000000000000000000000000000000003043 217.0
PJS3_k127_1698631_2 Aminoacyl-tRNA editing domain - - - 0.0000000000000000000000000000000000000000000000000001508 194.0
PJS3_k127_1726989_0 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000929 338.0
PJS3_k127_1726989_1 lysyl-tRNA synthetase K04568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007358 248.0
PJS3_k127_1726989_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000000007904 227.0
PJS3_k127_1726989_3 COG2885 outer membrane protein and related peptidoglycan-associated (lipo)proteins - - - 0.000002662 60.0
PJS3_k127_1736718_0 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006444 344.0
PJS3_k127_1736718_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01485,K01487,K11991 - 3.5.4.1,3.5.4.3,3.5.4.33 0.0000000000000000000000000000000000000000000000000000000002575 207.0
PJS3_k127_1736718_2 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000001126 190.0
PJS3_k127_1736718_3 coenzyme F420-1:gamma-L-glutamate ligase activity K02302,K04719 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016491,GO:0016705,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.13.11.79,1.3.1.76,2.1.1.107,4.99.1.4 0.00000000006764 64.0
PJS3_k127_18082_0 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001066 295.0
PJS3_k127_18082_1 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000004503 171.0
PJS3_k127_18082_3 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.000003069 55.0
PJS3_k127_1826552_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 6.565e-299 934.0
PJS3_k127_1826552_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 597.0
PJS3_k127_1826552_2 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000002068 166.0
PJS3_k127_1826552_3 protein conserved in bacteria K15539 - - 0.00000000000000000000000000000000000004296 147.0
PJS3_k127_1845913_0 amine oxidase K00274 - 1.4.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 336.0
PJS3_k127_1845913_1 ChrR Cupin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004241 298.0
PJS3_k127_1845913_2 short-chain dehydrogenase reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003485 269.0
PJS3_k127_1845913_3 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000001692 252.0
PJS3_k127_1845913_4 - - - - 0.000002553 59.0
PJS3_k127_1866536_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 598.0
PJS3_k127_1866536_1 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 595.0
PJS3_k127_1866536_2 Mechanosensitive ion channel K03442 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 305.0
PJS3_k127_1866536_3 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000005236 191.0
PJS3_k127_1866536_4 SURF1-like protein K14998 - - 0.0000000000000000006028 89.0
PJS3_k127_1872788_0 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second K01958 - 6.4.1.1 1.212e-314 977.0
PJS3_k127_1872788_1 cation diffusion facilitator family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003544 327.0
PJS3_k127_1872788_2 Protein of unknown function, DUF547 - - - 0.0000000000001705 71.0
PJS3_k127_192029_0 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 342.0
PJS3_k127_192029_1 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 300.0
PJS3_k127_1924638_0 HemY protein N-terminus K02498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000866 310.0
PJS3_k127_1924638_1 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002259 249.0
PJS3_k127_1924638_2 Helix-turn-helix domain - - - 0.0000000000000000000009449 98.0
PJS3_k127_1924638_3 Mitochondrial inner membrane protein - - - 0.000003649 57.0
PJS3_k127_1944399_0 electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 439.0
PJS3_k127_1944399_1 Dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 422.0
PJS3_k127_1944399_2 general L-amino acid-binding periplasmic protein AapJ K09969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 330.0
PJS3_k127_1944399_3 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002546 276.0
PJS3_k127_1944399_4 argininosuccinate lyase K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006961 269.0
PJS3_k127_1944399_5 Histidine kinase K07716 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000004453 211.0
PJS3_k127_1944399_6 spore germination - - - 0.000000000000000000000000000000000000000000000000000268 197.0
PJS3_k127_1944399_7 Thioredoxin-like - - - 0.00000000000000000000000000000000000000004271 160.0
PJS3_k127_1950065_0 L-serine dehydratase K01752 GO:0003674,GO:0003824,GO:0003941,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016829,GO:0016840,GO:0016841,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575 4.3.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 554.0
PJS3_k127_1950065_1 Penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000001071 196.0
PJS3_k127_1950065_2 Flavin reductase like domain - - - 0.00000000000000000000000000000000000003714 148.0
PJS3_k127_195467_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 415.0
PJS3_k127_195467_1 Domain of unknown function (DUF3333) K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 409.0
PJS3_k127_195467_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 352.0
PJS3_k127_195467_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002282 269.0
PJS3_k127_195467_4 Cobinamide kinase / cobinamide phosphate guanyltransferase K02231 - 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000000001106 174.0
PJS3_k127_198025_0 diguanylate cyclase K02488 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008391 537.0
PJS3_k127_198025_1 Belongs to the hyi family K01816 - 5.3.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004596 280.0
PJS3_k127_198025_2 Metal dependent phosphohydrolases with conserved 'HD' motif. K06952 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001404 254.0
PJS3_k127_198025_3 Cell wall-associated hydrolases (invasion-associated proteins) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008573 257.0
PJS3_k127_198025_4 COG0784 FOG CheY-like receiver K11443 - - 0.00000000000000000000000000000000000000000000000000000000000004067 225.0
PJS3_k127_198025_5 ROK family K00845,K00847 - 2.7.1.2,2.7.1.4 0.0000000000000000000000000000000000000000000000000000003852 198.0
PJS3_k127_198025_6 Chemotaxis phosphatase, CheZ K03414 - - 0.0000000000000000000000000000000000000001072 156.0
PJS3_k127_198025_7 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000000000006871 135.0
PJS3_k127_1981446_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 573.0
PJS3_k127_1981446_1 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000000000000004397 195.0
PJS3_k127_1981446_2 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000007066 158.0
PJS3_k127_1993658_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 528.0
PJS3_k127_1993658_1 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 484.0
PJS3_k127_1993658_2 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 446.0
PJS3_k127_1993658_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 311.0
PJS3_k127_1993658_4 Belongs to the complex I subunit 6 family K00339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000002491 243.0
PJS3_k127_1993658_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000005151 158.0
PJS3_k127_2028628_0 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000003007 194.0
PJS3_k127_2028628_1 DNA repair protein MmcB-like - - - 0.0000000000000000000000000000000000000000157 158.0
PJS3_k127_2028628_2 GMP synthase (glutamine-hydrolyzing) activity K01951 - 6.3.5.2 0.0000000000000000000000000000000000002984 149.0
PJS3_k127_2029832_0 And related proteins - - - 2.028e-261 814.0
PJS3_k127_2029832_1 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 492.0
PJS3_k127_2029832_2 Peptidase family M48 K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 385.0
PJS3_k127_2029832_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00023,K00059 - 1.1.1.100,1.1.1.36 0.00000000000000000000000000000000000002303 143.0
PJS3_k127_2029832_4 NUDIX domain K03574 - 3.6.1.55 0.00000000000000000000000000000000006845 138.0
PJS3_k127_2033392_0 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032 - - 1.464e-265 831.0
PJS3_k127_2033392_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 1.808e-214 684.0
PJS3_k127_2033392_2 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 492.0
PJS3_k127_2033392_3 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008019 466.0
PJS3_k127_2033392_4 - - - - 0.00000000000000002462 89.0
PJS3_k127_2033392_5 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.0000000000004018 73.0
PJS3_k127_2038439_0 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 5.436e-260 809.0
PJS3_k127_2038439_1 Cell division protein FtsI penicillin-binding protein 2 K05515 - 3.4.16.4 4.221e-235 741.0
PJS3_k127_2038439_2 Rod shape-determining protein MreB K03569 - - 4.863e-198 619.0
PJS3_k127_2038439_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006171 593.0
PJS3_k127_2038439_4 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001514 251.0
PJS3_k127_2038439_5 ACT domain K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000005872 215.0
PJS3_k127_2038439_6 shape-determining protein K03571 - - 0.00000000000000000000000000000004421 131.0
PJS3_k127_2038439_7 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000005927 130.0
PJS3_k127_2052447_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 451.0
PJS3_k127_2052447_1 - - - - 0.00000000000000000000000000000000000000000000001333 190.0
PJS3_k127_2052447_2 cheY-homologous receiver domain - - - 0.00000000000000000000000009841 112.0
PJS3_k127_2052447_3 Putative diguanylate phosphodiesterase - - - 0.0000000001828 65.0
PJS3_k127_208978_0 N-methylhydantoinase A acetone carboxylase, beta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 362.0
PJS3_k127_208978_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 291.0
PJS3_k127_208978_2 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000000000000000006095 144.0
PJS3_k127_2116525_0 PFAM Histone deacetylase domain K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007062 396.0
PJS3_k127_2116525_1 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004074 289.0
PJS3_k127_2116525_2 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000001929 228.0
PJS3_k127_2116525_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000003065 100.0
PJS3_k127_2116525_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000001722 90.0
PJS3_k127_2125109_0 CHASE4 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 422.0
PJS3_k127_2125109_1 Multicopper oxidase K00368 - 1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009509 391.0
PJS3_k127_2125109_2 NnrS protein K07234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005414 363.0
PJS3_k127_2125109_3 Cyclic nucleotide-monophosphate binding domain K21564 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 339.0
PJS3_k127_2125109_4 Multicopper oxidase K00368 - 1.7.2.1 0.000000000000000000000000000001773 128.0
PJS3_k127_2125109_5 Group 1 truncated hemoglobin K06886 - - 0.000000000000000000000000000003544 123.0
PJS3_k127_2125109_6 Cyclic nucleotide-monophosphate binding domain K21563 - - 0.000000000000000003513 86.0
PJS3_k127_2125109_8 pseudoazurin - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00001734 49.0
PJS3_k127_2162658_0 transcriptional regulator K02167 - - 0.0000000000000000000000000000000000000000000000000000000000002057 218.0
PJS3_k127_2162658_1 Signal transduction histidine kinase regulating C4-dicarboxylate transport system K10125 - 2.7.13.3 0.000000000000000000000000000000000000000003169 166.0
PJS3_k127_2164077_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 290.0
PJS3_k127_2164077_1 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000001013 251.0
PJS3_k127_2164077_2 Bacterial regulatory helix-turn-helix protein, lysR family K03566 - - 0.000000000000000000001682 96.0
PJS3_k127_2173641_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 480.0
PJS3_k127_2173641_1 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006121 443.0
PJS3_k127_2173641_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009507 322.0
PJS3_k127_2173641_3 COG2199 FOG GGDEF domain K13069 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007734 284.0
PJS3_k127_2173641_4 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000002242 270.0
PJS3_k127_2173641_5 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000000000000001578 207.0
PJS3_k127_2173641_6 - - - - 0.0000000000000000000000000002363 123.0
PJS3_k127_2173641_7 - - - - 0.000000000000000000000000002174 117.0
PJS3_k127_2173641_8 endoribonuclease L-PSP - - - 0.000000000000000000001229 99.0
PJS3_k127_2173641_9 CHASE2 K01768 - 4.6.1.1 0.0000000000002219 75.0
PJS3_k127_2188493_0 N-formylglutamate amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 290.0
PJS3_k127_2188493_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001217 256.0
PJS3_k127_2188493_2 translation initiation inhibitor, yjgF family - - - 0.000000000000000000000000000000000000000000000000006281 184.0
PJS3_k127_2205234_0 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 304.0
PJS3_k127_2205234_1 Phytanoyl-CoA dioxygenase (PhyH) K10674 - 1.14.11.55 0.00000000000000000000000000000000000000000000000000000000009314 214.0
PJS3_k127_2205234_2 EamA-like transporter family - - - 0.0000000000000000000000000002421 124.0
PJS3_k127_2205234_3 PAS domain - - - 0.0002373 50.0
PJS3_k127_2211755_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.191e-279 875.0
PJS3_k127_2211755_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000003771 183.0
PJS3_k127_2211755_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000000000000001296 154.0
PJS3_k127_2240047_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 2.143e-240 754.0
PJS3_k127_2240047_1 Bacterial protein of unknown function (DUF839) K07093 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004052 278.0
PJS3_k127_226054_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 5.43e-247 771.0
PJS3_k127_226054_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005658 421.0
PJS3_k127_226054_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000008117 185.0
PJS3_k127_226054_3 Uncharacterized ACR, COG1399 - - - 0.00000000000000000000000000000000004394 141.0
PJS3_k127_226054_4 COG2913 Small protein A (tmRNA-binding) - - - 0.00000000000000000000000000001497 128.0
PJS3_k127_226054_5 Ubiquinol-cytochrome C chaperone K17662 - - 0.0000000000000000000000000002941 123.0
PJS3_k127_226054_6 Ribosomal L32p protein family K02911 - - 0.00000000000000000005114 90.0
PJS3_k127_2265261_0 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00651 - 2.3.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006018 401.0
PJS3_k127_2265261_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 342.0
PJS3_k127_2265261_2 chorismate mutase - - - 0.000000000000000000000000000000000000000000000000000007102 214.0
PJS3_k127_2265261_3 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000006375 182.0
PJS3_k127_2265261_4 Protein conserved in bacteria K09796 - - 0.0000000000000000000000000000755 124.0
PJS3_k127_2267819_0 Histidine kinase K07638 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 495.0
PJS3_k127_2267819_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 325.0
PJS3_k127_2267819_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007806 273.0
PJS3_k127_2267819_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000005178 220.0
PJS3_k127_2267819_4 COG0073 EMAP domain K06878 GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000003652 185.0
PJS3_k127_2267819_5 Domain of unknown function (DUF4262) - - - 0.000000000000000000000000000000000000000000000001827 180.0
PJS3_k127_2267819_6 transcriptional regulator - - - 0.0000000000000000000000000000000000003036 149.0
PJS3_k127_2267819_7 Phasin protein - - - 0.000000000001354 76.0
PJS3_k127_2271154_0 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 413.0
PJS3_k127_2271154_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 346.0
PJS3_k127_2271154_2 Peptidase M15A - - - 0.00000000000000000000000000000000000000000000419 171.0
PJS3_k127_2271154_3 Protein of unknown function (DUF2726) - - - 0.000000000000000000000000000000002594 136.0
PJS3_k127_227234_0 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 4.356e-274 857.0
PJS3_k127_227234_1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 511.0
PJS3_k127_227234_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 485.0
PJS3_k127_227234_3 branched-chain amino acid K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007187 454.0
PJS3_k127_227234_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 454.0
PJS3_k127_227234_5 transcriptional regulator - - - 0.00000000000000003662 87.0
PJS3_k127_2279982_0 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008899 496.0
PJS3_k127_2279982_1 Transcriptional regulator K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001491 258.0
PJS3_k127_2279982_2 Domain of unknown function (DUF1127) - - - 0.000001024 53.0
PJS3_k127_2299713_0 ABC transporter transmembrane region K02021 - - 1.141e-256 826.0
PJS3_k127_2299713_1 CHASE2 K01768,K01769 - 4.6.1.1,4.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 300.0
PJS3_k127_2299713_2 Chalcone and stilbene synthases, C-terminal domain K16167 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001957 279.0
PJS3_k127_2299713_3 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000000002449 190.0
PJS3_k127_2305302_0 2Fe-2S iron-sulfur cluster binding domain K22086 - 1.5.99.5 1.269e-317 997.0
PJS3_k127_2305302_1 Sarcosine oxidase, gamma subunit K22087 - 1.5.99.5 0.00000000000000000000000000000002002 133.0
PJS3_k127_2320579_0 DNA polymerase K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008192 610.0
PJS3_k127_2333633_0 Oxidoreductase FAD-binding domain K02613 GO:0000166,GO:0003674,GO:0005488,GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0036094,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051536,GO:0051537,GO:0051540,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0097159,GO:0098754,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 392.0
PJS3_k127_2333633_1 Iron-sulfur cluster assembly protein K02612 - - 0.00000000000000000000000000000000000000000000000000000000007366 209.0
PJS3_k127_2333633_2 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000009207 179.0
PJS3_k127_2333633_3 phenylacetic acid degradation protein K02611 - 1.14.13.149 0.000000000000000000000000000000000000004164 147.0
PJS3_k127_2348720_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K16871 - 2.6.1.96 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 551.0
PJS3_k127_2396174_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.479e-300 934.0
PJS3_k127_2396174_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005392 306.0
PJS3_k127_2396174_2 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000000000000007349 160.0
PJS3_k127_2396174_3 protein conserved in bacteria K09790 - - 0.000000000000000000000000000000004603 132.0
PJS3_k127_2396174_4 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.000000000000006001 75.0
PJS3_k127_2397314_0 COG2217 Cation transport ATPase K01533 - 3.6.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008681 321.0
PJS3_k127_2397314_1 chemotaxis protein K03414 - - 0.00000000000000000000000000000000000000000000000000000000001459 215.0
PJS3_k127_2397314_2 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000001321 89.0
PJS3_k127_2397314_3 Fumarase C-terminus K03780 - 4.2.1.32 0.00000000000005654 72.0
PJS3_k127_2397314_4 cytochrome oxidase maturation protein - - - 0.000000000001072 79.0
PJS3_k127_2414045_0 Belongs to the UbiD family K03182 - 4.1.1.98 4.771e-294 906.0
PJS3_k127_2414045_1 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 318.0
PJS3_k127_2414045_2 Ribosomal protein L11 methyltransferase - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010565,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031974,GO:0031998,GO:0031999,GO:0032259,GO:0036211,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043467,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045833,GO:0045922,GO:0046320,GO:0046322,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050994,GO:0050995,GO:0051341,GO:0051354,GO:0062012,GO:0062014,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1904732,GO:1904733,GO:1904735,GO:1904736 - 0.000000000000000000000000000000000000000000000000000000000000000001474 236.0
PJS3_k127_2414045_3 Domain of unknown function (DUF4170) - - - 0.000000000000000000000000000000000006937 140.0
PJS3_k127_2414045_4 - - - - 0.00000000000000000000000001124 119.0
PJS3_k127_2427427_0 o-acetylhomoserine K01740 - 2.5.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 386.0
PJS3_k127_2427427_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003658 255.0
PJS3_k127_2427427_2 Thioesterase-like superfamily - - - 0.000000000000000000000000000000000000000000003932 172.0
PJS3_k127_2427427_3 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.00000001487 56.0
PJS3_k127_2429399_0 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006005 273.0
PJS3_k127_2429399_1 transcriptional regulator K07736 - - 0.00000000000000000000000000000000000000000000000000000000000000000001826 235.0
PJS3_k127_2429399_2 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000000007648 214.0
PJS3_k127_2429399_3 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000000008135 205.0
PJS3_k127_2429399_4 ABC transporter substrate-binding protein K02035 - - 0.000000000000000000000001158 106.0
PJS3_k127_2429399_5 Haemolysin-III related K11068 - - 0.000000000000000000000002801 104.0
PJS3_k127_2430453_0 Glycosyl transferase, family 2 K12991,K12997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 297.0
PJS3_k127_2430453_1 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003523 283.0
PJS3_k127_2430453_2 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000001611 213.0
PJS3_k127_2444970_0 Surface antigen K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009533 479.0
PJS3_k127_2444970_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000002016 77.0
PJS3_k127_2453260_0 Pyridine nucleotide-disulphide oxidoreductase K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007432 373.0
PJS3_k127_2453260_1 cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 301.0
PJS3_k127_2471879_0 COG1653 ABC-type sugar transport system, periplasmic component K17321 - - 0.0 1043.0
PJS3_k127_2471879_1 Glycerol-3-phosphate dehydrogenase K00111,K21054 - 1.1.1.402,1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 350.0
PJS3_k127_2471879_2 ABC transporter K17324 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007128 317.0
PJS3_k127_2471879_3 transcriptional regulator K02444 GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 308.0
PJS3_k127_2497751_0 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 317.0
PJS3_k127_2497751_1 NADPH-dependent FMN reductase K03809 GO:0000166,GO:0003674,GO:0003824,GO:0003955,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0010181,GO:0016043,GO:0016491,GO:0016651,GO:0016655,GO:0022607,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001819 282.0
PJS3_k127_2497751_2 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000002713 254.0
PJS3_k127_2508641_0 imidazolonepropionase activity K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005812 524.0
PJS3_k127_2508641_1 Amidohydrolase family K05603 - 3.5.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 433.0
PJS3_k127_2508641_2 Coenzyme F420-reducing hydrogenase, beta subunit K00441 - 1.12.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001486 275.0
PJS3_k127_252272_0 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001006 274.0
PJS3_k127_252272_1 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000276 276.0
PJS3_k127_252272_2 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000000000000000000000000000839 189.0
PJS3_k127_2523540_0 enoyl-CoA hydratase K15513 - 4.1.2.44 3.745e-246 771.0
PJS3_k127_2523540_1 benzoyl-CoA oxygenase K15512 - 1.14.13.208 5.489e-239 747.0
PJS3_k127_2534898_0 Sulfate permease family K03321 - - 7.636e-246 773.0
PJS3_k127_2534898_1 cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001486 262.0
PJS3_k127_2534898_2 transcriptional regulator - - - 0.0000000000000000000000000000000005525 133.0
PJS3_k127_2534898_3 Alpha beta hydrolase - - - 0.000003079 51.0
PJS3_k127_2544479_0 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000231 260.0
PJS3_k127_2544479_1 Tetratricopeptide repeat-like domain - - - 0.000000000000000000000000000000000006166 145.0
PJS3_k127_2544479_2 GcrA cell cycle regulator K13583 - - 0.00000000000000000000000000002516 124.0
PJS3_k127_2544479_3 Protein of unknown function (DUF2794) - - - 0.000000000000000000000006182 105.0
PJS3_k127_2544479_4 - - - - 0.00000000000000002848 87.0
PJS3_k127_2544479_5 - - - - 0.00000000000007421 76.0
PJS3_k127_2544479_6 COG1520 FOG WD40-like repeat - - - 0.0000003775 54.0
PJS3_k127_25536_0 Belongs to the LDH2 MDH2 oxidoreductase family K13609,K16844 - 1.1.1.338,1.5.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 417.0
PJS3_k127_25536_1 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001563 255.0
PJS3_k127_25536_2 Transcriptional - - - 0.0000000000000000000000000000002472 126.0
PJS3_k127_25536_3 Protein of unknown function (DUF3726) - - - 0.0000000000008277 79.0
PJS3_k127_2565035_0 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005584 437.0
PJS3_k127_2565035_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008993 403.0
PJS3_k127_2565035_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006176 310.0
PJS3_k127_2565035_3 ATP synthase subunit beta K00574,K18164 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000001307 246.0
PJS3_k127_2565035_4 transcriptional - - - 0.0000000000000000000000000000000000000000000000000000000003379 207.0
PJS3_k127_2565035_5 Membrane fusogenic activity K09806 - - 0.000000000000000008983 88.0
PJS3_k127_2572383_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.0 1079.0
PJS3_k127_2572383_1 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 417.0
PJS3_k127_2572383_2 Protein of unknown function (DUF3429) - - - 0.0000000000000000005243 94.0
PJS3_k127_2572487_0 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005535 584.0
PJS3_k127_2572487_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003869 370.0
PJS3_k127_2572487_2 Cytochrome P460 - - - 0.000000000000000000000000000000000001012 146.0
PJS3_k127_2572487_3 PFAM blue (type 1) copper domain protein - - - 0.0000000000179 68.0
PJS3_k127_2577060_0 COG1042 Acyl-CoA synthetase (NDP forming) K09181 - - 1.833e-298 940.0
PJS3_k127_2577060_1 PFAM Major Facilitator Superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 447.0
PJS3_k127_2577060_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000004703 261.0
PJS3_k127_2577060_3 KR domain K00023,K00059 - 1.1.1.100,1.1.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000002964 253.0
PJS3_k127_258048_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003825 453.0
PJS3_k127_258048_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 306.0
PJS3_k127_258048_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000001201 252.0
PJS3_k127_258048_3 Domain of unknown function (DUF4167) - - - 0.000000000000000003237 93.0
PJS3_k127_2590641_0 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 315.0
PJS3_k127_2590641_1 succinate dehydrogenase K00246 - - 0.00000000000000000000000001154 112.0
PJS3_k127_2590641_2 PAS domain - - - 0.00006128 52.0
PJS3_k127_2594750_0 Zinc carboxypeptidase K06987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 310.0
PJS3_k127_2594750_1 Transcriptional - - - 0.000000000000000000000000000000000000000000002191 167.0
PJS3_k127_2594750_2 LysR substrate binding domain K03566 - - 0.00000000000000009543 85.0
PJS3_k127_2616779_0 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 465.0
PJS3_k127_2616779_1 N-formylglutamate amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002241 249.0
PJS3_k127_2616779_2 protein conserved in bacteria K09948 - - 0.0000000000000000000000000000000000000000004994 159.0
PJS3_k127_2616779_3 COG2186 Transcriptional regulators K05799,K14348 - - 0.00000000000000000000000000000000000000002043 161.0
PJS3_k127_2616779_4 Histidine kinase - - - 0.00000000000000000000000000000000001577 142.0
PJS3_k127_2636656_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008538 542.0
PJS3_k127_2636656_1 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 421.0
PJS3_k127_2636656_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781,K20023 - 4.2.1.156,4.2.1.42,5.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 401.0
PJS3_k127_2636656_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002769 285.0
PJS3_k127_2636656_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000004124 244.0
PJS3_k127_2636656_5 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000003128 168.0
PJS3_k127_2636656_6 COG0739 Membrane proteins related to metalloendopeptidases K06194 - - 0.00000000000000000000000000000001064 135.0
PJS3_k127_2636656_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 GO:0003674,GO:0005215 - 0.0000000000000000002351 98.0
PJS3_k127_2636656_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 GO:0003674,GO:0005215 - 0.00000000000008809 74.0
PJS3_k127_2638152_0 COG0642 Signal transduction histidine kinase K14980 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 300.0
PJS3_k127_2638152_1 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000001415 192.0
PJS3_k127_2639858_0 Phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009294 331.0
PJS3_k127_2639858_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 327.0
PJS3_k127_2639858_2 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 325.0
PJS3_k127_2639858_3 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000002061 247.0
PJS3_k127_2639858_4 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000008879 219.0
PJS3_k127_2639858_5 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000000000002029 215.0
PJS3_k127_2639858_6 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000006131 199.0
PJS3_k127_2639858_7 Cupin - - - 0.0000000000000000000000000000001798 130.0
PJS3_k127_2641740_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1100.0
PJS3_k127_2641740_1 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 1.501e-225 702.0
PJS3_k127_2641740_2 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01761 - 4.4.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 567.0
PJS3_k127_2641740_3 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 452.0
PJS3_k127_2641740_4 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000005279 204.0
PJS3_k127_2641740_5 - - - - 0.0000000000000000000000000000000001733 138.0
PJS3_k127_2641740_6 Uncharacterized protein family UPF0016 - - - 0.0000000000000000000000000000000005569 134.0
PJS3_k127_2651181_0 Protein of unknown function (DUF1538) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 320.0
PJS3_k127_2651181_1 Protein of unknown function (DUF1538) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 315.0
PJS3_k127_2651181_2 carbohydrate binding K07336 - - 0.00000000000000000000000000000000000000000000000000000000002331 211.0
PJS3_k127_2651181_3 Belongs to the P(II) protein family - - - 0.0000000000000000000000000000000002254 134.0
PJS3_k127_2651181_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000007513 141.0
PJS3_k127_2678271_0 COG2217 Cation transport ATPase K01533 - 3.6.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 603.0
PJS3_k127_2678271_1 Nitrogen fixation protein fixG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005308 276.0
PJS3_k127_2678271_2 FixH - - - 0.0000000000000000000000001033 113.0
PJS3_k127_2678470_0 synthetase - - - 1.217e-198 631.0
PJS3_k127_2678470_1 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 392.0
PJS3_k127_2678470_2 LysR substrate binding domain K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002977 274.0
PJS3_k127_2678470_3 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.00000000000000000000000000000007501 126.0
PJS3_k127_2678470_4 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000002165 107.0
PJS3_k127_2678970_0 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 447.0
PJS3_k127_2678970_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003925 297.0
PJS3_k127_2678970_2 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000004111 231.0
PJS3_k127_2678970_3 Cold shock protein domain K03704 - - 0.000000000000000000000000000000000000000001161 161.0
PJS3_k127_2678970_4 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000000004506 132.0
PJS3_k127_2698262_0 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 290.0
PJS3_k127_2698262_1 Aminoacyl-tRNA editing domain K19055 - - 0.0000000000000000000000000000000000000000000000000001774 191.0
PJS3_k127_2698262_2 Tetratricopeptide repeat K03671,K05838 - - 0.0000000000000000000000000000000000000000000000000004198 188.0
PJS3_k127_2698262_3 MarR family - - - 0.00000000000000000000000000000000000000002483 158.0
PJS3_k127_2702273_0 Non-motile and phage-resistance protein K07716 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000003044 216.0
PJS3_k127_2702273_1 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000002729 163.0
PJS3_k127_2734478_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008242 401.0
PJS3_k127_2734478_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001355 278.0
PJS3_k127_2734478_2 protein containing caspase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002857 288.0
PJS3_k127_2734478_3 protein involved in formation of curli polymers - - - 0.00000000000000000002746 96.0
PJS3_k127_2734478_4 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000000005025 78.0
PJS3_k127_273729_0 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 6.336e-267 830.0
PJS3_k127_273729_1 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 377.0
PJS3_k127_273729_2 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 295.0
PJS3_k127_273729_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000766 246.0
PJS3_k127_273729_4 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.0000000000000000000000000000000000000000000000000000000000000005936 234.0
PJS3_k127_274267_0 NADP-dependent oxidoreductase K07119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 372.0
PJS3_k127_274267_1 Belongs to the GcvT family K00302 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000006585 246.0
PJS3_k127_274267_2 COG0604 NADPH quinone reductase and related Zn-dependent K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000003916 161.0
PJS3_k127_274267_3 TIGRFAM sarcosine oxidase, gamma subunit family, heterotetrameric form K00305 - 1.5.3.1 0.000000000000000000000000000000008492 135.0
PJS3_k127_274267_4 Protein of unknown function (DUF1192) - - - 0.0004874 46.0
PJS3_k127_2747928_0 COG2951 Membrane-bound lytic murein transglycosylase B K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007421 293.0
PJS3_k127_2747928_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000008711 224.0
PJS3_k127_2754941_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000003864 239.0
PJS3_k127_2754941_1 peptidase M24 - - - 0.0000000000000000000000000000000000000007621 152.0
PJS3_k127_2754941_2 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000005284 124.0
PJS3_k127_2754941_4 TonB-dependent receptor K16092 - - 0.00000000000001364 78.0
PJS3_k127_2758737_0 COG0277 FAD FMN-containing dehydrogenases K00102 - 1.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000098 449.0
PJS3_k127_2758737_1 COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 - 3.4.16.4 0.00000000000000000000000000000000162 147.0
PJS3_k127_2758737_2 - - - - 0.00000000000001444 79.0
PJS3_k127_2758737_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000001602 57.0
PJS3_k127_2759905_0 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 2.46e-213 677.0
PJS3_k127_2759905_1 Binding-protein-dependent transport system inner membrane component K13894 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006857,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0022857,GO:0035672,GO:0042221,GO:0042493,GO:0042884,GO:0042886,GO:0042891,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000001009 163.0
PJS3_k127_2761904_0 RNA polymerase sigma K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 444.0
PJS3_k127_2761904_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000005913 235.0
PJS3_k127_2761904_2 - - - - 0.0000000000000000004133 95.0
PJS3_k127_2776503_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 1.102e-271 848.0
PJS3_k127_2776503_1 HD domain - - - 0.00000000000000000000001256 104.0
PJS3_k127_2777753_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 3.957e-227 721.0
PJS3_k127_2777753_1 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008011 433.0
PJS3_k127_2780099_0 Creatinase/Prolidase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 506.0
PJS3_k127_2780099_1 Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 286.0
PJS3_k127_2780099_2 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006402 280.0
PJS3_k127_2780099_3 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000001264 200.0
PJS3_k127_2780099_4 Acetyltransferase (GNAT) domain K03830 - - 0.000000000000000000000000000008982 130.0
PJS3_k127_2780099_5 - - - - 0.00000000000000000000000000001063 130.0
PJS3_k127_2780099_6 Protein of unknown function (DUF1326) - - - 0.00000000000000008566 81.0
PJS3_k127_2791321_0 Trap dicarboxylate transporter-dctm subunit K11690 GO:0005575,GO:0016020,GO:0016021,GO:0031224,GO:0044425 - 9.889e-228 711.0
PJS3_k127_2791321_1 Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 423.0
PJS3_k127_2791321_2 TRAP-type C4-dicarboxylate transport system, small permease component K11689 GO:0003674,GO:0005215,GO:0005310,GO:0005342,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015318,GO:0015556,GO:0015711,GO:0015740,GO:0015849,GO:0022857,GO:0034220,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0098656,GO:1903825,GO:1905039 - 0.000000000000000000000000000000000000000000000000000000000000000000004155 241.0
PJS3_k127_2791321_3 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000000000000000000000000000000000000001117 211.0
PJS3_k127_2791321_4 - - - - 0.000000000000000000000000000000005123 136.0
PJS3_k127_2793193_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08351 - - 3.862e-287 902.0
PJS3_k127_2793193_1 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000084 324.0
PJS3_k127_2793193_2 Belongs to the GPI family K01810,K13810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000269 207.0
PJS3_k127_2793193_4 Thioesterase-like superfamily K07107 - - 0.000229 51.0
PJS3_k127_2798858_0 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006876 278.0
PJS3_k127_2798858_1 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K00950,K13940 - 2.7.6.3,4.1.2.25 0.000000000000000000000000000000000001041 152.0
PJS3_k127_2798858_2 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000002428 100.0
PJS3_k127_2803118_0 Fumarylacetoacetate (FAA) hydrolase family K01826 - 5.3.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 326.0
PJS3_k127_2803118_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000006121 222.0
PJS3_k127_2803118_2 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000001475 179.0
PJS3_k127_2813256_0 HELICc2 K03722 - 3.6.4.12 1.798e-306 955.0
PJS3_k127_2813256_1 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 5.137e-206 653.0
PJS3_k127_2813256_2 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000862 317.0
PJS3_k127_2813256_3 Membrane transport protein K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 289.0
PJS3_k127_2813256_4 transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001536 248.0
PJS3_k127_2813256_5 Tellurite resistance protein TerB - - - 0.000000000000000000000000000000000000008155 149.0
PJS3_k127_2813256_6 2OG-Fe(II) oxygenase superfamily - - - 0.0000001418 61.0
PJS3_k127_2827858_0 Pfam Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008269 291.0
PJS3_k127_2827858_1 nitric oxide reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001118 265.0
PJS3_k127_2827858_2 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003835 261.0
PJS3_k127_2827858_3 COG1309 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000001602 189.0
PJS3_k127_2831843_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1025.0
PJS3_k127_2831843_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 500.0
PJS3_k127_2831843_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000001586 261.0
PJS3_k127_2831843_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000125 208.0
PJS3_k127_2831843_4 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 - 0.000004127 48.0
PJS3_k127_2848316_0 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K03520 - 1.2.5.3 0.0 1038.0
PJS3_k127_2848316_1 VWA domain containing CoxE-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006338 400.0
PJS3_k127_2848316_2 AAA domain (dynein-related subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 334.0
PJS3_k127_2848316_3 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family - - - 0.0000000000000000000000000000000000000000000000002319 179.0
PJS3_k127_295439_0 Belongs to the UbiD family K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 319.0
PJS3_k127_295439_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 309.0
PJS3_k127_295439_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000002692 120.0
PJS3_k127_295439_3 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000001094 107.0
PJS3_k127_2957394_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 543.0
PJS3_k127_2957394_1 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000001188 154.0
PJS3_k127_2966093_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007245 540.0
PJS3_k127_2966093_1 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 492.0
PJS3_k127_2966093_2 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.000000000000000000000000000000000000000000000000001733 187.0
PJS3_k127_2966093_3 Phosphate transport system permease K02038 - - 0.00000000000000000000000000000009223 134.0
PJS3_k127_2971356_0 Copper amine oxidase, N3 domain K00276 - 1.4.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 492.0
PJS3_k127_2971356_1 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 341.0
PJS3_k127_2971356_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 327.0
PJS3_k127_2971356_3 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006552 251.0
PJS3_k127_2971356_4 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000009039 201.0
PJS3_k127_298543_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 416.0
PJS3_k127_298543_1 Sulfite reductase K00381 - 1.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 341.0
PJS3_k127_298543_2 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016020,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046116,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072531,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1990397 - 0.000000000000000000000000000000000000000000000000002975 190.0
PJS3_k127_298543_3 Bacterial protein of unknown function (DUF934) - - - 0.00000000000000000000000000000000000000000000004026 174.0
PJS3_k127_2999228_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18989 - - 1.878e-242 768.0
PJS3_k127_2999228_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001672 258.0
PJS3_k127_2999228_2 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000000000000004319 184.0
PJS3_k127_2999228_3 Protein of unknown function (DUF1178) - - - 0.00000000000000000000000000000000000000307 150.0
PJS3_k127_3010781_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 3.081e-280 868.0
PJS3_k127_3010781_1 COG4770 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005918 502.0
PJS3_k127_3010781_2 Enoyl-CoA hydratase K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 317.0
PJS3_k127_3010781_3 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000002152 228.0
PJS3_k127_3029800_0 Glycine cleavage T-protein C-terminal barrel domain - - - 2.563e-235 737.0
PJS3_k127_3029800_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000001919 160.0
PJS3_k127_3029800_2 Evidence 4 Homologs of previously reported genes of K09700 - - 0.0000000000000000000000000000000000000007621 152.0
PJS3_k127_3029800_3 Short C-terminal domain K08982 - - 0.00000000000000000008913 100.0
PJS3_k127_3039094_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 584.0
PJS3_k127_3039094_1 COG1520 FOG WD40-like repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 359.0
PJS3_k127_3047694_0 Belongs to the DapA family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004903 308.0
PJS3_k127_3047694_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000009908 201.0
PJS3_k127_3047694_2 Response regulator, receiver - - - 0.0000000000001451 81.0
PJS3_k127_3057161_0 Putative amidoligase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009285 294.0
PJS3_k127_3057161_1 glutamine K07010 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004285 255.0
PJS3_k127_3057161_2 methyl-accepting chemotaxis protein - - - 0.00000000000000000000000000000000000000001611 175.0
PJS3_k127_3057161_4 penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.00001032 50.0
PJS3_k127_3057161_5 Invasion associated locus B (IalB) protein - - - 0.0000126 52.0
PJS3_k127_3060338_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 9.006e-209 666.0
PJS3_k127_3060338_1 PFAM Penicillin binding protein transpeptidase domain K03587 - 3.4.16.4 4.526e-197 631.0
PJS3_k127_3060338_10 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000009579 179.0
PJS3_k127_3060338_11 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000007888 138.0
PJS3_k127_3060338_12 periplasmic protein - - - 0.000000000007511 76.0
PJS3_k127_3060338_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 557.0
PJS3_k127_3060338_3 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 528.0
PJS3_k127_3060338_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 481.0
PJS3_k127_3060338_5 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 467.0
PJS3_k127_3060338_6 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01928,K01929,K15792 - 6.3.2.10,6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005781 437.0
PJS3_k127_3060338_7 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 396.0
PJS3_k127_3060338_8 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 371.0
PJS3_k127_3060338_9 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008457 367.0
PJS3_k127_3098615_0 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 593.0
PJS3_k127_3098615_1 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005126 453.0
PJS3_k127_3098615_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000958 164.0
PJS3_k127_3125952_0 COG1748 Saccharopine dehydrogenase and related proteins K13746 - 1.5.1.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007381 422.0
PJS3_k127_3125952_1 Belongs to the Orn Lys Arg decarboxylase class-II family. NspC subfamily K13747 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0019842,GO:0030170,GO:0034641,GO:0036094,GO:0042401,GO:0042710,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0044010,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044764,GO:0045312,GO:0046204,GO:0046983,GO:0048037,GO:0050662,GO:0051704,GO:0070279,GO:0071704,GO:0097159,GO:0097164,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.1.1.96 0.00000000000000000000000000000000000000000000002365 178.0
PJS3_k127_3128410_0 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 557.0
PJS3_k127_3128410_1 COG2030 Acyl dehydratase - - - 0.0000000000003973 77.0
PJS3_k127_3128410_2 part of an ABC transporter complex. Responsible for energy coupling to the transport system K16784 - - 0.00000000002651 68.0
PJS3_k127_3128410_3 PAS domain - - - 0.00005811 52.0
PJS3_k127_31412_0 COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins K03466 - - 1.348e-272 861.0
PJS3_k127_31412_1 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006375 419.0
PJS3_k127_31412_2 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 385.0
PJS3_k127_31412_3 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008799 351.0
PJS3_k127_31412_4 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000004098 160.0
PJS3_k127_31412_5 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.000000000000000000000000000000000002312 142.0
PJS3_k127_3152877_0 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 391.0
PJS3_k127_3152877_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000008158 254.0
PJS3_k127_317029_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 7.014e-222 698.0
PJS3_k127_317029_1 TatD related DNase K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 348.0
PJS3_k127_317029_2 DNA polymerase III subunit delta K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 313.0
PJS3_k127_317029_3 Na+/Pi-cotransporter K03324 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 306.0
PJS3_k127_317029_4 Beta-lactamase superfamily domain K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 299.0
PJS3_k127_3192292_0 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 537.0
PJS3_k127_3192292_1 methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 521.0
PJS3_k127_3192292_2 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 322.0
PJS3_k127_3195347_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 561.0
PJS3_k127_3195347_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005353 494.0
PJS3_k127_3195347_2 phosphoserine phosphatase K01079 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000001145 255.0
PJS3_k127_3195347_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000006597 162.0
PJS3_k127_3195347_4 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000003271 89.0
PJS3_k127_3195347_5 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.0000000002407 64.0
PJS3_k127_3253364_0 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second K01958 - 6.4.1.1 3.18e-232 726.0
PJS3_k127_3253364_1 Glycine betaine proline ABC transporter, periplasmic substrate-binding protein K02002 - - 0.000000000000000000005536 96.0
PJS3_k127_3271989_0 COG1178 ABC-type Fe3 transport system, permease component K02011 - - 2.162e-231 728.0
PJS3_k127_3271989_1 COG1840 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 444.0
PJS3_k127_3271989_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000865 428.0
PJS3_k127_3271989_3 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002322 231.0
PJS3_k127_3271989_4 COG1957 Inosine-uridine nucleoside N-ribohydrolase K01239,K01250 - 3.2.2.1 0.00000000000000000000000000000000000000000000000000000000002707 219.0
PJS3_k127_3271989_5 Negative regulator of beta-lactamase expression K00788,K01447,K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 2.5.1.3,3.5.1.28 0.000000000000000000000000000000000000000000000000000000003924 209.0
PJS3_k127_3271989_6 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000000000000002457 154.0
PJS3_k127_3277819_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1160.0
PJS3_k127_3277819_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000003128 243.0
PJS3_k127_3277819_2 peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000001691 201.0
PJS3_k127_3304409_0 Phenylacetic acid-responsive transcriptional repressor K02616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 316.0
PJS3_k127_3304409_1 Belongs to the universal stress protein A family - - - 0.00000000000000002521 89.0
PJS3_k127_3304618_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 357.0
PJS3_k127_3304618_1 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000006274 229.0
PJS3_k127_3304618_2 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000000000000001213 203.0
PJS3_k127_3304618_3 Uncharacterised protein family (UPF0262) - - - 0.00000000000000000000000000000000000000000000000000002043 194.0
PJS3_k127_3304618_4 ribonuclease, Rne Rng family K08301 - - 0.000000000000000000000000000000000000000001622 173.0
PJS3_k127_331948_0 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 466.0
PJS3_k127_331948_1 2OG-Fe(II) oxygenase superfamily K03919 - 1.14.11.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 301.0
PJS3_k127_331948_2 Heat shock 70 kDa protein K04043 - - 0.000000000000000006835 83.0
PJS3_k127_3345247_0 FAD dependent oxidoreductase central domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005696 418.0
PJS3_k127_3345247_1 Trimethylamine methyltransferase (MTTB) - - - 0.0000000000000000000000000000000000236 138.0
PJS3_k127_3345247_2 PAS domain - - - 0.00000000000000000000000005738 117.0
PJS3_k127_3352382_0 epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000002277 265.0
PJS3_k127_3352382_1 Polyhydroxyalkanoate synthesis repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002073 247.0
PJS3_k127_3352382_2 alpha/beta hydrolase fold K03821 - - 0.0000000000000000000000000000000000000009256 159.0
PJS3_k127_3352382_3 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase K02851,K13007 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000003103 119.0
PJS3_k127_3358181_0 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 0.000000000000000000000000000000000000000000000000000000000000000000003985 241.0
PJS3_k127_3358181_1 Domain of unknown function (DUF4863) - - - 0.0000000000000000000000000000000000000000000000000000000000005469 214.0
PJS3_k127_3358181_2 Flavodoxin - - - 0.0000000000000000000000000000000000000000001497 170.0
PJS3_k127_3358181_3 Shikimate kinase - - - 0.0000000000000000008779 90.0
PJS3_k127_3366348_0 Oligopeptide/dipeptide transporter, C-terminal region K12372 GO:0000166,GO:0003674,GO:0005215,GO:0005488,GO:0005524,GO:0006810,GO:0008144,GO:0008150,GO:0009314,GO:0009628,GO:0015232,GO:0015886,GO:0017076,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0050896,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901678 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 417.0
PJS3_k127_3366348_1 Belongs to the ABC transporter superfamily K12371 GO:0000166,GO:0003674,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008144,GO:0008150,GO:0015232,GO:0015886,GO:0016020,GO:0017076,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901678 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 344.0
PJS3_k127_3366348_2 COG0665 Glycine D-amino acid oxidases (deaminating) K19746 - 1.4.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 330.0
PJS3_k127_3366348_3 Carboxylesterase family K01432 - 3.5.1.9 0.0000000000000000000000004339 109.0
PJS3_k127_3373194_0 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 454.0
PJS3_k127_3373194_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 441.0
PJS3_k127_3373194_10 Ferric uptake regulator family K03711 - - 0.00000000000000000000000000000000000000000000000000000000007432 208.0
PJS3_k127_3373194_11 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000000000001896 184.0
PJS3_k127_3373194_12 COG1214 Inactive homolog of metal-dependent proteases K14742 - - 0.0000000000000000000000000000000000000002279 158.0
PJS3_k127_3373194_13 FR47-like protein K03789 - 2.3.1.128 0.0000000000000000000003591 102.0
PJS3_k127_3373194_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 442.0
PJS3_k127_3373194_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004001 359.0
PJS3_k127_3373194_4 xylanase chitin deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 356.0
PJS3_k127_3373194_5 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 311.0
PJS3_k127_3373194_6 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 287.0
PJS3_k127_3373194_7 amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009135 287.0
PJS3_k127_3373194_8 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000006401 243.0
PJS3_k127_3373194_9 ROS/MUCR transcriptional regulator protein - - - 0.0000000000000000000000000000000000000000000000000000000000371 207.0
PJS3_k127_3373847_0 xanthine dehydrogenase activity K03520 - 1.2.5.3 3.152e-209 674.0
PJS3_k127_3373847_1 Winged helix DNA-binding domain K09927 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 428.0
PJS3_k127_3373847_2 Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007161 411.0
PJS3_k127_3373847_3 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 305.0
PJS3_k127_3373847_4 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000001447 238.0
PJS3_k127_3373847_5 Fe-S protein K06938 - - 0.0000000000000001102 83.0
PJS3_k127_3374193_0 NAD-specific glutamate dehydrogenase K15371 - 1.4.1.2 1.208e-202 650.0
PJS3_k127_3374193_1 Transcriptional regulator, LuxR family - - - 0.0000000000004318 78.0
PJS3_k127_3391031_0 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 490.0
PJS3_k127_3391031_1 class II Aldolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 329.0
PJS3_k127_3391031_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000007541 129.0
PJS3_k127_3435507_0 Benzoate membrane transport protein K05782 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006733 444.0
PJS3_k127_3435507_1 ABC-type histidine transport system, ATPase component K02028,K10025 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 418.0
PJS3_k127_3435507_2 Belongs to the bacterial solute-binding protein 3 family K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 296.0
PJS3_k127_3435507_3 Outer membrane efflux protein K12543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 305.0
PJS3_k127_3435507_4 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 287.0
PJS3_k127_3435507_5 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001035 249.0
PJS3_k127_3435507_6 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000001611 229.0
PJS3_k127_3438454_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 485.0
PJS3_k127_3438454_1 cobalamin synthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006868 429.0
PJS3_k127_3438454_2 Amidase K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000001192 199.0
PJS3_k127_3454586_0 Hydantoinase B/oxoprolinase K01469 - 3.5.2.9 1.587e-319 990.0
PJS3_k127_3457710_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 1.486e-233 730.0
PJS3_k127_3457710_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 1.858e-208 653.0
PJS3_k127_3457710_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 330.0
PJS3_k127_3457710_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 287.0
PJS3_k127_3457710_4 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit K00334,K03943 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000331 220.0
PJS3_k127_3457710_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000002884 209.0
PJS3_k127_3457710_6 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 0.0000000000000000000000000000000000007718 139.0
PJS3_k127_3467844_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K21308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 386.0
PJS3_k127_3467844_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K21307 - 1.8.5.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 382.0
PJS3_k127_3467844_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000000000000000001449 111.0
PJS3_k127_350520_0 peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 565.0
PJS3_k127_350520_1 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007653 272.0
PJS3_k127_350520_2 PFAM Uncharacterised protein family UPF0057 - - - 0.0000000000000000000007467 95.0
PJS3_k127_350520_3 - - - - 0.0000000000893 72.0
PJS3_k127_3506307_0 chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 572.0
PJS3_k127_3506307_1 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000409 366.0
PJS3_k127_3506307_2 Protein of unknown function (DUF952) - - - 0.0000000000000000000000000007168 119.0
PJS3_k127_3506307_3 - - - - 0.00000000000000000000000004317 111.0
PJS3_k127_3514386_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 598.0
PJS3_k127_3514386_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 339.0
PJS3_k127_3514386_2 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000000000000000000000002173 155.0
PJS3_k127_3514386_3 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.0000000000000000000000000000000002777 136.0
PJS3_k127_3514386_4 transcriptional regulator - - - 0.0000000000000000000008859 99.0
PJS3_k127_3514586_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 1.149e-230 726.0
PJS3_k127_3514586_1 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000000000003022 181.0
PJS3_k127_3514586_2 Belongs to the BolA IbaG family - - - 0.0000000000000000000000000000001082 128.0
PJS3_k127_3514586_3 Glutathione S-transferase K07136 - - 0.0000000000001901 72.0
PJS3_k127_3524646_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000464 536.0
PJS3_k127_3524646_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 472.0
PJS3_k127_3524646_2 PBP superfamily domain K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009528 353.0
PJS3_k127_3524646_3 Homocysteine S-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 332.0
PJS3_k127_3524646_4 ABC transporter - - - 0.000000000000000000000000000000001869 131.0
PJS3_k127_3524646_5 Belongs to the flagella basal body rod proteins family K02388 - - 0.0001551 51.0
PJS3_k127_3535167_0 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 1.058e-215 675.0
PJS3_k127_3535167_1 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 387.0
PJS3_k127_3535167_2 Enoyl-CoA hydratase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000005467 267.0
PJS3_k127_3535167_3 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000000000001795 192.0
PJS3_k127_3535167_4 ROS/MUCR transcriptional regulator protein - - - 0.000000000000000000000000000000000000000000000003527 179.0
PJS3_k127_3535167_5 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.0000000000000000000000000000022 129.0
PJS3_k127_3550610_0 Sarcosine oxidase beta subunit K00303 - 1.5.3.1 9.688e-204 642.0
PJS3_k127_3550610_1 Belongs to the GcvT family K00302,K22086 - 1.5.3.1,1.5.99.5 0.0000000000000000000000000000000001637 133.0
PJS3_k127_3550610_2 Function of homologous gene experimentally demonstrated in an other organism K00304,K22085 - 1.5.3.1,1.5.99.5 0.00000000000000000000000008415 109.0
PJS3_k127_3560450_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 1.037e-240 755.0
PJS3_k127_3560450_1 Maleate cis-trans isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003651 280.0
PJS3_k127_3560450_2 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000516 267.0
PJS3_k127_3560450_3 Transcriptional regulator K13771 - - 0.00000000000000000000000000000000000000000000214 170.0
PJS3_k127_3560450_4 COG2346 Truncated hemoglobins K06886 - - 0.0000000000000000000000000000000000000000249 157.0
PJS3_k127_3560450_5 PAS domain - - - 0.000000000000009948 82.0
PJS3_k127_3562868_0 Belongs to the peptidase S16 family - - - 5.375e-195 627.0
PJS3_k127_3562868_1 MOSC N-terminal beta barrel domain K07140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001789 250.0
PJS3_k127_3572664_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007407 377.0
PJS3_k127_3572664_1 Bacterial regulatory protein, Fis family K15012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007784 265.0
PJS3_k127_3600610_0 TIGRFAM ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 - - 0.0000000000000000000000000002518 126.0
PJS3_k127_3600610_1 Response regulator receiver - - - 0.000000000414 61.0
PJS3_k127_3600610_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000179 59.0
PJS3_k127_3623238_0 Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 413.0
PJS3_k127_3623238_1 ABC 3 transport family K09816 GO:0000006,GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0010035,GO:0010038,GO:0010043,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0042221,GO:0044464,GO:0046873,GO:0046915,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001734 256.0
PJS3_k127_3623238_2 ABC-type Zn2 transport system, periplasmic component surface adhesin K09815 - - 0.00000000000000000000000000000000000000000000001535 179.0
PJS3_k127_3638161_0 Periplasmic copper-binding protein (NosD) K07218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 509.0
PJS3_k127_3638161_1 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 331.0
PJS3_k127_3638161_2 ABC-2 family transporter protein K01992,K19341 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001631 285.0
PJS3_k127_3638161_3 lipoprotein involved in nitrous oxide reduction K19342 - - 0.0000000000000000000000000000000000000000003814 165.0
PJS3_k127_3638161_4 Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide K00376 - 1.7.2.4 0.00000000000000000000000000000000000001242 144.0
PJS3_k127_3660800_0 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 392.0
PJS3_k127_3660800_1 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005134 282.0
PJS3_k127_3660800_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000001983 235.0
PJS3_k127_3660800_3 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000009027 231.0
PJS3_k127_3660800_4 Electron transfer DM13 - - - 0.000000000000000000000000001255 122.0
PJS3_k127_3662772_0 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 319.0
PJS3_k127_3662772_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 292.0
PJS3_k127_3662772_2 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000004058 224.0
PJS3_k127_3682789_0 EAL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 430.0
PJS3_k127_3682789_1 COG1541 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 421.0
PJS3_k127_3683422_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00019 - 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 337.0
PJS3_k127_3683422_1 SnoaL-like domain - - - 0.000000000000000000000000000001829 139.0
PJS3_k127_3683422_2 Protein of unknown function (DUF3833) - - - 0.0000000000008664 69.0
PJS3_k127_3689903_0 glutamine synthetase K01915 GO:0003674,GO:0003824,GO:0006576,GO:0006595,GO:0006598,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009308,GO:0009310,GO:0009445,GO:0009447,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0034024,GO:0034641,GO:0042402,GO:0044106,GO:0044237,GO:0071704,GO:0097164,GO:1901564,GO:1901565,GO:1901575 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 482.0
PJS3_k127_3689903_1 FAD dependent oxidoreductase K09471 - - 0.00000000000000000000000000000000000000000000000000000000000000000000185 249.0
PJS3_k127_3731400_0 FeS assembly protein SufB K09014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 524.0
PJS3_k127_3731400_1 Transcriptional regulator - - - 0.00000000000000000000000000000000000000004292 163.0
PJS3_k127_3731400_2 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000715 76.0
PJS3_k127_3731759_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 598.0
PJS3_k127_3731759_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008535 530.0
PJS3_k127_3731759_2 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 0.0006651 43.0
PJS3_k127_3790788_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 441.0
PJS3_k127_3790788_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 283.0
PJS3_k127_3790788_2 - - - - 0.00000000000000000000000000000000000000003242 162.0
PJS3_k127_3809490_0 methylated-DNA- protein -cysteine S-methyltransferase K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 299.0
PJS3_k127_3809490_1 epimerase, PhzC PhzF homolog - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004859 296.0
PJS3_k127_3809490_2 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000114 171.0
PJS3_k127_3809490_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000004002 122.0
PJS3_k127_3815410_0 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 417.0
PJS3_k127_3815410_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 318.0
PJS3_k127_3815410_2 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000006103 150.0
PJS3_k127_3815410_3 Pyruvate ferredoxin oxidoreductase and related K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000002161 120.0
PJS3_k127_3836334_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1096.0
PJS3_k127_3836334_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 1.612e-264 838.0
PJS3_k127_3836334_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 558.0
PJS3_k127_3836334_3 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006172 398.0
PJS3_k127_3836334_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 370.0
PJS3_k127_3836334_5 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000003933 246.0
PJS3_k127_3836334_6 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.000000000000000000000000000000000000000000002826 178.0
PJS3_k127_3836334_7 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000003358 164.0
PJS3_k127_3845840_0 PFAM helix-turn-helix HxlR type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 302.0
PJS3_k127_3845840_1 RNA signal recognition particle 4.5S RNA - - - 0.0000000000000000000000000000000000000000000000009667 176.0
PJS3_k127_3845840_2 Staphylococcal nuclease homologue - - - 0.00000000000000000000004131 108.0
PJS3_k127_3845840_3 Protein of unknown function, DUF393 - - - 0.0000000007024 63.0
PJS3_k127_3875795_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 451.0
PJS3_k127_3875795_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000557 243.0
PJS3_k127_3875795_2 Sulfite exporter TauE/SafE - - - 0.000000000000000000000000000000000000000000000000000009311 204.0
PJS3_k127_3875795_3 Heparinase II/III-like protein - - - 0.0000000000003951 71.0
PJS3_k127_3875795_4 - - - - 0.0008007 44.0
PJS3_k127_3886264_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family K00317 - 1.5.8.1,1.5.8.2 0.0 1023.0
PJS3_k127_3886264_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007872 345.0
PJS3_k127_3886264_2 Oxidoreductase - - - 0.00000000000000002839 82.0
PJS3_k127_3888258_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916 - 6.3.1.5 3.645e-240 754.0
PJS3_k127_3888258_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 417.0
PJS3_k127_3888258_2 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000004839 50.0
PJS3_k127_3889073_0 ABC-type proline glycine betaine transport system permease component K02001 - - 6.559e-275 862.0
PJS3_k127_3889073_1 PFAM ABC transporter K02000 - 3.6.3.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 477.0
PJS3_k127_3889073_2 Choline kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 387.0
PJS3_k127_3889073_3 COG0665 Glycine D-amino acid oxidases (deaminating) K19191 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006520,GO:0006575,GO:0006576,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008480,GO:0009056,GO:0009063,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016491,GO:0016645,GO:0019695,GO:0019752,GO:0019842,GO:0031406,GO:0031974,GO:0033218,GO:0034641,GO:0035999,GO:0036094,GO:0042133,GO:0042135,GO:0042219,GO:0042402,GO:0042426,GO:0042558,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046483,GO:0046653,GO:0046997,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0055114,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0072341,GO:0097159,GO:0097164,GO:1901052,GO:1901053,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.5.3.19 0.000000000004817 65.0
PJS3_k127_389479_0 Aminotransferase class-III K00822 - 2.6.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 475.0
PJS3_k127_389479_1 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 306.0
PJS3_k127_389479_2 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002563 272.0
PJS3_k127_3895951_0 COG4664 TRAP-type mannitol chloroaromatic compound transport system large permease component - - - 1.817e-226 709.0
PJS3_k127_3895951_1 Bacterial extracellular solute-binding protein, family 7 - - - 3.152e-197 619.0
PJS3_k127_3895951_2 glutamine synthetase K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009801 501.0
PJS3_k127_3895951_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009379 240.0
PJS3_k127_3895951_4 N-formylglutamate amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000185 214.0
PJS3_k127_390144_0 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004862 312.0
PJS3_k127_390144_1 COG2771 DNA-binding HTH domain-containing proteins - - - 0.0000000000000000000000000000000000000000000001181 175.0
PJS3_k127_3901547_0 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009374 493.0
PJS3_k127_3901547_1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000405 440.0
PJS3_k127_3901547_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000104 289.0
PJS3_k127_3909939_0 tRNA processing K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 397.0
PJS3_k127_3909939_1 PFAM asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000003273 265.0
PJS3_k127_392091_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001985 376.0
PJS3_k127_392091_1 Molecular chaperone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 334.0
PJS3_k127_392091_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 316.0
PJS3_k127_392091_3 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008428 278.0
PJS3_k127_392091_4 17 kDa outer membrane surface antigen - - - 0.00000000000000000000000000000000000000000000000000000003411 200.0
PJS3_k127_392091_5 - - - - 0.00000000000000000000000000000001694 128.0
PJS3_k127_392091_6 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.00000000000000000000000000485 111.0
PJS3_k127_394358_0 rRNA methylase K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007845 366.0
PJS3_k127_394358_1 COG0616 Periplasmic serine proteases (ClpP class) K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 376.0
PJS3_k127_394358_2 transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001768 244.0
PJS3_k127_3964320_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.219e-257 806.0
PJS3_k127_3964320_1 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008408 335.0
PJS3_k127_3964320_2 ATP synthase K02115 - - 0.00000000000000000000000000000000000000000000000000000169 193.0
PJS3_k127_3964320_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02113,K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000004583 140.0
PJS3_k127_3964320_4 SprA-related family - - - 0.000000000000000000000000000008719 127.0
PJS3_k127_3974386_0 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 2.857e-206 648.0
PJS3_k127_3974386_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 565.0
PJS3_k127_3974386_2 Trypsin K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051603,GO:0061077,GO:0070011,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 491.0
PJS3_k127_3974386_3 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP) K03707 - 3.5.99.2 0.00000000000000000000000000000000000000000000000000000000000000000001584 239.0
PJS3_k127_3974386_4 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000002047 234.0
PJS3_k127_3974386_5 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000000000001412 213.0
PJS3_k127_3974386_6 structural constituent of ribosome K02879 - - 0.00000000000000000000000000000000000000000000000000000000001901 208.0
PJS3_k127_3974386_7 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000000000003978 189.0
PJS3_k127_3974386_8 Responsible for synthesis of pseudouridine from uracil K06179 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.24 0.000000000000000000000000000000000000002693 150.0
PJS3_k127_3974386_9 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000004133 142.0
PJS3_k127_3994747_0 Trimethylamine corrinoid methyltransferase K14083 - 2.1.1.250 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 526.0
PJS3_k127_3994747_1 NADH flavin oxidoreductase NADH oxidase K21833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 370.0
PJS3_k127_3994747_2 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 336.0
PJS3_k127_401658_0 malic enzyme K00029 - 1.1.1.40 0.0 1099.0
PJS3_k127_401658_1 signal transduction histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 371.0
PJS3_k127_401658_2 This protein is involved in the repair of mismatches in DNA K03555 - - 0.000000000000000000000000000000000000000000000008428 176.0
PJS3_k127_401826_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.407e-235 748.0
PJS3_k127_401826_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000004978 186.0
PJS3_k127_401826_2 acetyltransferase K22278 - 3.5.1.104 0.0000000000000000418 85.0
PJS3_k127_4057029_0 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 429.0
PJS3_k127_4057029_1 Surface antigen K07278 - - 0.00000253 56.0
PJS3_k127_4060931_0 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000000000000000000000003013 204.0
PJS3_k127_4060931_1 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000007473 162.0
PJS3_k127_4060931_2 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000003744 138.0
PJS3_k127_4060931_3 dienelactone hydrolase - - - 0.00000000000000000128 93.0
PJS3_k127_406338_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.547e-197 641.0
PJS3_k127_406338_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002021 244.0
PJS3_k127_406338_2 COG4942 Membrane-bound metallopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000009941 246.0
PJS3_k127_406338_3 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000000000000000002089 184.0
PJS3_k127_406338_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000001214 180.0
PJS3_k127_4067613_0 PAS PAC domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 484.0
PJS3_k127_4067613_1 Transcriptional regulator - - - 0.000000000000281 73.0
PJS3_k127_4069552_0 Aldehyde dehydrogenase family - - - 4.546e-213 674.0
PJS3_k127_4069552_1 Bacterial transferase hexapeptide (six repeats) K02617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002295 285.0
PJS3_k127_4127776_0 MFS/sugar transport protein K03292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 439.0
PJS3_k127_4127776_1 Mycolic acid cyclopropane synthetase K00574 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0008825,GO:0009987,GO:0016740,GO:0016741,GO:0030258,GO:0032259,GO:0044237,GO:0044238,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0071704 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000085 436.0
PJS3_k127_4127776_2 Protein of unknown function (DUF1365) K09701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001201 291.0
PJS3_k127_4127776_3 Flavin containing amine oxidoreductase K06954 - - 0.00000000000000000000000000000000000000000000000000000002519 202.0
PJS3_k127_4127776_4 Protein of unknown function (DUF3833) - - - 0.00000000000000000000000000000000000000000000000000001652 205.0
PJS3_k127_4151528_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 4.031e-304 944.0
PJS3_k127_4153661_0 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006733 452.0
PJS3_k127_4153661_1 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000006633 245.0
PJS3_k127_4153661_2 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003872 233.0
PJS3_k127_4153661_3 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000002689 160.0
PJS3_k127_4153661_4 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000219 99.0
PJS3_k127_4164241_0 Required for the activity of the bacterial periplasmic transport system of putrescine K11073 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0019808,GO:0019810,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0051179,GO:0051234,GO:0070405,GO:0071702,GO:0071705 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007134 515.0
PJS3_k127_4164241_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 467.0
PJS3_k127_4164241_2 nuclear chromosome segregation - - - 0.00000000000000000000000000000000001664 148.0
PJS3_k127_416600_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 526.0
PJS3_k127_416600_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000005248 212.0
PJS3_k127_4188593_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 433.0
PJS3_k127_4188593_1 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 318.0
PJS3_k127_4188593_2 Acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000001152 151.0
PJS3_k127_4188593_3 - - - - 0.0000000000000000000000000000000000007329 147.0
PJS3_k127_4188593_4 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000000799 127.0
PJS3_k127_4192032_0 Aldehyde dehydrogenase family K15786 - - 2.938e-252 785.0
PJS3_k127_4192032_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K15785 - 2.6.1.76 1.427e-236 734.0
PJS3_k127_4192032_2 transcriptional regulator K15782 - - 0.00000000000000000000000000000000000000000000000000000000000000004416 225.0
PJS3_k127_4214830_0 COG0687 Spermidine putrescine-binding periplasmic protein K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 603.0
PJS3_k127_4214830_1 TOBE domain K11072 - 3.6.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008792 436.0
PJS3_k127_4214830_2 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000003275 231.0
PJS3_k127_4214830_3 helix_turn_helix ASNC type - - - 0.00000000000000000000000000000000000000000000000000000000000009432 216.0
PJS3_k127_4224885_0 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 295.0
PJS3_k127_4224885_1 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000000000000003021 121.0
PJS3_k127_4224885_2 Ribosomal protein L34 K02914 - - 0.000000000000273 70.0
PJS3_k127_4226394_0 COG0119 Isopropylmalate homocitrate citramalate synthases K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004924 433.0
PJS3_k127_4226394_1 COG4770 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000006071 259.0
PJS3_k127_4226394_2 Protein of unknown function (DUF1489) - - - 0.0000000000000000000000000000000014 139.0
PJS3_k127_4226689_0 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 411.0
PJS3_k127_4226689_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 369.0
PJS3_k127_4232911_0 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 460.0
PJS3_k127_4232911_1 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 359.0
PJS3_k127_4232911_2 - - - - 0.0005002 48.0
PJS3_k127_4249255_0 A circularly permuted ATPgrasp - - - 3.655e-224 703.0
PJS3_k127_4249255_1 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 409.0
PJS3_k127_4249255_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 359.0
PJS3_k127_4249255_3 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008281 314.0
PJS3_k127_4249255_4 Proteasome-type protease K07395 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 304.0
PJS3_k127_4256979_0 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001116 256.0
PJS3_k127_4256979_1 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000236 211.0
PJS3_k127_4256979_2 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000001439 159.0
PJS3_k127_4256979_3 metal cluster binding - - - 0.0000000002066 65.0
PJS3_k127_4256979_4 Psort location CytoplasmicMembrane, score - - - 0.0000004006 56.0
PJS3_k127_4308515_0 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 4.367e-223 704.0
PJS3_k127_4308515_1 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 518.0
PJS3_k127_4308515_2 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.00000000000000000000000000000000000000000002571 166.0
PJS3_k127_4360641_0 transcriptional regulators - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002746 280.0
PJS3_k127_4360641_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000134 268.0
PJS3_k127_4360641_2 lipoprotein involved in nitrous oxide reduction K19342 - - 0.000000000000000000000001211 108.0
PJS3_k127_4360641_3 branched-chain amino acid - - - 0.0000000001878 71.0
PJS3_k127_4360641_4 Branched-chain amino acid transport - - - 0.00006841 50.0
PJS3_k127_4370490_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 389.0
PJS3_k127_4388322_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 306.0
PJS3_k127_4388322_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002088 240.0
PJS3_k127_4388322_2 MaoC like domain - - - 0.0000000000000000000000000000000000000008028 154.0
PJS3_k127_4388322_3 NADH:flavin oxidoreductase / NADH oxidase family K00219 - 1.3.1.34 0.000000000003767 68.0
PJS3_k127_4392530_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 4.818e-233 731.0
PJS3_k127_4392530_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 434.0
PJS3_k127_4392530_2 Bacterial extracellular solute-binding proteins, family 5 Middle K12368 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 367.0
PJS3_k127_4392530_3 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily K15270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004718 277.0
PJS3_k127_4392530_4 COG2200 FOG EAL domain - - - 0.00000000000000000000011 109.0
PJS3_k127_4392530_5 Fumarylacetoacetate (FAA) hydrolase family K16856 - 4.3.2.3 0.000000001077 60.0
PJS3_k127_4395624_0 COG1702 Phosphate starvation-inducible protein PhoH K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 404.0
PJS3_k127_4395624_1 COG1253 Hemolysins and related proteins containing CBS domains K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007671 331.0
PJS3_k127_4395624_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000004719 181.0
PJS3_k127_4395624_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000000183 153.0
PJS3_k127_4396780_0 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 424.0
PJS3_k127_4396780_1 Belongs to the GcvT family K06980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002047 277.0
PJS3_k127_4396780_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000007249 250.0
PJS3_k127_4396780_3 COQ9 K18587 - - 0.0000000000000000000000000000000000000000000000000000000000000000004928 236.0
PJS3_k127_4396780_4 (LPS) heptosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000002835 237.0
PJS3_k127_4396780_5 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000006793 206.0
PJS3_k127_4396780_6 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000001837 150.0
PJS3_k127_4396780_7 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000000000000000003678 111.0
PJS3_k127_4396780_8 Protein of unknown function (DUF465) - - - 0.00000001835 55.0
PJS3_k127_4396780_9 Diguanylate cyclase - - - 0.000009576 56.0
PJS3_k127_4401289_0 NnrU protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009093 250.0
PJS3_k127_4401289_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000001536 209.0
PJS3_k127_4401289_2 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000008624 181.0
PJS3_k127_4401289_3 FecR protein - - - 0.0000000000000000000000000000000000003819 158.0
PJS3_k127_4430292_0 Prephenate dehydratase K04518 - 4.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 351.0
PJS3_k127_4430292_1 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 - 3.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 302.0
PJS3_k127_4430292_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000009002 219.0
PJS3_k127_4430292_3 Zincin-like metallopeptidase - - - 0.00000000000000000000000000000000000000000000738 168.0
PJS3_k127_4430292_4 Pterin 4 alpha carbinolamine dehydratase K01724 GO:0003674,GO:0003712,GO:0003713,GO:0003824,GO:0004497,GO:0004505,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006082,GO:0006355,GO:0006520,GO:0006558,GO:0006559,GO:0006725,GO:0006807,GO:0008124,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016054,GO:0016491,GO:0016705,GO:0016714,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0019219,GO:0019222,GO:0019439,GO:0019752,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0042737,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043393,GO:0043436,GO:0043496,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045893,GO:0045935,GO:0046395,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051098,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051291,GO:0055114,GO:0060255,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0140110,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902221,GO:1902222,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 4.2.1.96 0.000000000000000000000000000000007503 136.0
PJS3_k127_4430292_5 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.0000682 47.0
PJS3_k127_4433186_0 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 565.0
PJS3_k127_4433186_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 530.0
PJS3_k127_4433186_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 435.0
PJS3_k127_4433186_3 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000002785 265.0
PJS3_k127_4433186_4 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000006246 143.0
PJS3_k127_4435055_0 DNA polymerase K02337 - 2.7.7.7 5.566e-307 954.0
PJS3_k127_4435055_1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 470.0
PJS3_k127_4435055_2 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006807,GO:0006810,GO:0008104,GO:0008150,GO:0008152,GO:0015031,GO:0015399,GO:0015405,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0022804,GO:0022857,GO:0031224,GO:0032991,GO:0033036,GO:0042157,GO:0042160,GO:0042623,GO:0042626,GO:0042886,GO:0042953,GO:0043170,GO:0043190,GO:0043492,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901564,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 298.0
PJS3_k127_4435055_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 0.00000000000006627 71.0
PJS3_k127_4436241_0 COG0513 Superfamily II DNA and RNA helicases K17675 - 3.6.4.13 1.775e-244 779.0
PJS3_k127_4460368_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1394.0
PJS3_k127_4460368_1 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 365.0
PJS3_k127_4460368_2 Hydrophobic amino acid ABC transporter (HAAT) family, permease protein K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 366.0
PJS3_k127_4460368_3 branched-chain amino acid K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 341.0
PJS3_k127_4460368_4 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000009565 69.0
PJS3_k127_4478043_0 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 5.598e-220 688.0
PJS3_k127_4478043_1 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000009923 260.0
PJS3_k127_4486620_0 Mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005826 443.0
PJS3_k127_4486620_1 Belongs to the N(4) N(6)-methyltransferase family K13581 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001392 281.0
PJS3_k127_4498741_0 TrkA-N domain - - - 2.45e-202 644.0
PJS3_k127_4498741_1 DegT/DnrJ/EryC1/StrS aminotransferase family K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 553.0
PJS3_k127_4498741_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000002468 211.0
PJS3_k127_4498741_3 hydratase' - - - 0.000000000000000000000000000000000001183 150.0
PJS3_k127_4498741_4 Belongs to the Dps family K04047 - - 0.00000000000000000000000000004345 116.0
PJS3_k127_4498741_5 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.0000000000006983 81.0
PJS3_k127_4514963_0 Branched-chain amino acid transport system permease K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 428.0
PJS3_k127_4514963_1 amino acid K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 416.0
PJS3_k127_4514963_2 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 391.0
PJS3_k127_4514963_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000005489 159.0
PJS3_k127_4519164_0 Putative diguanylate phosphodiesterase K13593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000258 285.0
PJS3_k127_4519164_1 L-cysteine cystine lyase K04127,K11325 - 5.1.1.17 0.000000000000000000000000000000000000000000000000000000000000003071 226.0
PJS3_k127_4519164_2 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000001848 225.0
PJS3_k127_4523676_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007889 326.0
PJS3_k127_4523676_1 COG1247 Sortase and related acyltransferases K03823 - 2.3.1.183 0.00000000000000000000000000000000000002675 147.0
PJS3_k127_4523676_2 Protein of unknown function (DUF805) - - - 0.00000000005234 69.0
PJS3_k127_4523676_3 Protein of unknown function (DUF805) - - - 0.000000003614 63.0
PJS3_k127_4524789_0 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 447.0
PJS3_k127_4524789_1 COG0451 Nucleoside-diphosphate-sugar epimerases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 364.0
PJS3_k127_4524789_2 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000009409 241.0
PJS3_k127_4538979_0 Molecular chaperone. Has ATPase activity K04079 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008316 590.0
PJS3_k127_4538979_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 332.0
PJS3_k127_4538979_2 Saccharopine dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001388 250.0
PJS3_k127_4538979_3 Protein of unknown function, DUF393 - - - 0.0000000000000000000000000000000000000000000000000001417 199.0
PJS3_k127_4548572_0 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 495.0
PJS3_k127_4548572_1 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 433.0
PJS3_k127_4548572_2 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000004773 268.0
PJS3_k127_4548572_3 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00000000000000000000000000000000000000000000000000000005775 207.0
PJS3_k127_4548572_4 COG4665 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.000000000000000000000000000000000000000000000000000214 190.0
PJS3_k127_4548572_5 chemotaxis MotB protein K02557 - - 0.00000000000000000000000000000008157 132.0
PJS3_k127_4548572_6 RDD family - - - 0.00000000001837 71.0
PJS3_k127_4564499_0 transport system fused permease components - - - 1.604e-244 773.0
PJS3_k127_4564499_1 TRAP transporter solute receptor TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 487.0
PJS3_k127_4564499_2 TRAP transporter solute receptor TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 328.0
PJS3_k127_4564499_3 NMT1-like family K07080 - - 0.00000000000005981 78.0
PJS3_k127_4573273_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K00249,K00294,K13821 - 1.2.1.88,1.3.8.7,1.5.5.2 2.95e-260 823.0
PJS3_k127_4574739_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 582.0
PJS3_k127_4574739_1 helix_turn_helix isocitrate lyase regulation K13641 - - 0.000000000000000000000000000000000000000000000000000000000000689 221.0
PJS3_k127_4579628_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006306 547.0
PJS3_k127_4579628_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000108 249.0
PJS3_k127_4579628_2 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.000000000000000000000000000000000000000000000000000000000001671 215.0
PJS3_k127_4579628_3 Protein of unknown function (FYDLN_acid) - - - 0.00000000000000000004094 94.0
PJS3_k127_4615904_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005784 260.0
PJS3_k127_4615904_1 - - - - 0.000000000000422 80.0
PJS3_k127_4655794_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0006355,GO:0006464,GO:0006807,GO:0006808,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0018175,GO:0018177,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0080090,GO:0090293,GO:1901564,GO:1901698,GO:1901699,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.7.7.59 0.0 1065.0
PJS3_k127_4655794_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 473.0
PJS3_k127_4655794_10 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000001122 124.0
PJS3_k127_4655794_2 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 447.0
PJS3_k127_4655794_3 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 454.0
PJS3_k127_4655794_4 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000855 447.0
PJS3_k127_4655794_5 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 336.0
PJS3_k127_4655794_6 acyl-CoA transferases carnitine dehydratase K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 299.0
PJS3_k127_4655794_7 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006963 273.0
PJS3_k127_4655794_8 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000002294 259.0
PJS3_k127_4655794_9 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000006785 141.0
PJS3_k127_4662093_0 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009266 512.0
PJS3_k127_4662093_1 beta-keto acid cleavage enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000241 231.0
PJS3_k127_4662093_2 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000001675 177.0
PJS3_k127_4665313_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 2.486e-291 911.0
PJS3_k127_4665313_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005573 525.0
PJS3_k127_4665313_2 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000002624 66.0
PJS3_k127_4669035_0 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 380.0
PJS3_k127_4669035_1 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000000000000000000001321 170.0
PJS3_k127_4669035_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000001803 115.0
PJS3_k127_4669423_0 alcohol dehydrogenase K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 487.0
PJS3_k127_4670356_0 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005533 355.0
PJS3_k127_4670356_1 transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000001062 212.0
PJS3_k127_4679187_0 amidohydrolase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 335.0
PJS3_k127_4679187_1 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000008941 184.0
PJS3_k127_4679187_2 tellurite resistance protein - - - 0.0000000000000000000000000000000000000000005928 163.0
PJS3_k127_4679187_3 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000000000000000000003738 132.0
PJS3_k127_4679187_4 Protein of unknown function (DUF1178) - - - 0.000002884 50.0
PJS3_k127_4698233_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007378 562.0
PJS3_k127_4698233_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000353 323.0
PJS3_k127_4715206_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 2.531e-222 696.0
PJS3_k127_4715206_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 579.0
PJS3_k127_4715206_2 ATPase (AAA K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 416.0
PJS3_k127_4715206_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004356 424.0
PJS3_k127_4715206_4 SecD/SecF GG Motif K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008475 340.0
PJS3_k127_4715206_5 Phytoene squalene synthetase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000004636 222.0
PJS3_k127_4715206_6 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000009507 172.0
PJS3_k127_4715206_7 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000000001551 133.0
PJS3_k127_4715206_8 Preprotein translocase subunit YajC K03210 - - 0.000000000000000000000000000001221 128.0
PJS3_k127_4715206_9 - - - - 0.00000000000000000000000001845 115.0
PJS3_k127_47186_0 His Kinase A (phosphoacceptor) domain - - - 6.62e-205 654.0
PJS3_k127_4769918_0 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000000000000000000000000000000000000001205 199.0
PJS3_k127_4769918_1 PFAM acylneuraminate cytidylyltransferase K07257 - - 0.0000000000000000000000000000001154 136.0
PJS3_k127_4769918_2 Spore Coat K16704 GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234 2.3.1.210 0.000000000000203 76.0
PJS3_k127_477179_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 1.55e-233 741.0
PJS3_k127_477179_1 COG0784 FOG CheY-like receiver - - - 0.00000000000000000000000000000000000000000000928 168.0
PJS3_k127_477179_2 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.000000000000000000000000005975 116.0
PJS3_k127_477179_3 Histidine kinase - - - 0.000000007383 63.0
PJS3_k127_477179_4 Cyclic nucleotide-monophosphate binding domain K10914 GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 - 0.00000001057 66.0
PJS3_k127_4779651_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 9.258e-233 731.0
PJS3_k127_4779651_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000846 501.0
PJS3_k127_4779651_2 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000003358 182.0
PJS3_k127_4779651_3 Stringent starvation protein B K09985 - - 0.000000000000000000000000000000000000006265 154.0
PJS3_k127_4779651_4 Hemimethylated DNA binding domain-containing protein K11940 - - 0.0000000000000000000000000000000001042 136.0
PJS3_k127_4779651_5 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000003264 90.0
PJS3_k127_479864_0 Protein conserved in bacteria K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008632 361.0
PJS3_k127_479864_1 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.000000000000000000000000000000000000000000000004722 179.0
PJS3_k127_479864_2 cytochrome - - - 0.000000000000000000000000000000000003763 141.0
PJS3_k127_479864_3 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000001938 66.0
PJS3_k127_4823277_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 5.631e-206 646.0
PJS3_k127_4823277_1 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 434.0
PJS3_k127_4823277_2 - - - - 0.000000000000000000000004943 110.0
PJS3_k127_4829877_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001043 232.0
PJS3_k127_4829877_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.00000000000000000000000000000000000000000000000001833 185.0
PJS3_k127_4829877_2 MotA/TolQ/ExbB proton channel family - - - 0.000000000000000000000000000000000001057 148.0
PJS3_k127_4829877_3 depolymerase K03932 - - 0.00000000000000000000000000000003859 138.0
PJS3_k127_4829877_4 - - - - 0.0000000000000000003837 95.0
PJS3_k127_4829877_5 NnrU protein K21310 - 2.1.1.334 0.000005702 51.0
PJS3_k127_4850558_0 formate dehydrogenase K00127 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 432.0
PJS3_k127_4850558_1 WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 321.0
PJS3_k127_4850558_2 Histidine kinase K05962 - 2.7.13.1 0.00000000000000000000000000000000000000000000000000000000000000000001143 243.0
PJS3_k127_485123_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 460.0
PJS3_k127_4861601_0 TrkA-C domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 542.0
PJS3_k127_4861601_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 471.0
PJS3_k127_4861601_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 346.0
PJS3_k127_4861601_3 VirC1 protein K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000002666 237.0
PJS3_k127_4861601_4 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000001076 132.0
PJS3_k127_4861601_5 EF-hand domain pair - - - 0.00000001667 65.0
PJS3_k127_4865821_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 7.428e-291 906.0
PJS3_k127_4865821_1 GTP-binding protein TypA K06207 - - 9.292e-268 840.0
PJS3_k127_4865821_2 glutamine amidotransferase - - - 0.00000000000000000000000000000000000000000000000000000000008787 212.0
PJS3_k127_4865821_3 Histidine kinase K05962 - 2.7.13.1 0.0000000000000000000000000000000000000000000000000000000001792 211.0
PJS3_k127_4872482_0 COG4175 ABC-type proline glycine betaine transport system ATPase component K02000 - 3.6.3.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 425.0
PJS3_k127_4872482_1 Glycine betaine proline ABC transporter, periplasmic substrate-binding protein K02002 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 340.0
PJS3_k127_4872482_2 Repressor involved in choline regulation of the bet genes K02167 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006950,GO:0006970,GO:0008150,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000002863 158.0
PJS3_k127_4872482_3 ABC-type proline glycine betaine transport system permease component K02001 - - 0.00000000000000197 80.0
PJS3_k127_4903041_0 Zn-dependent proteases and their inactivated homologs K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 552.0
PJS3_k127_4903041_1 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 460.0
PJS3_k127_493152_0 COG1138 Cytochrome c biogenesis factor K02198 - - 3.901e-288 901.0
PJS3_k127_493152_1 Belongs to the helicase family. UvrD subfamily K16898 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007435 546.0
PJS3_k127_493152_2 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006376 301.0
PJS3_k127_493152_3 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001171 260.0
PJS3_k127_493152_4 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000000000000006246 227.0
PJS3_k127_493152_5 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000001172 175.0
PJS3_k127_493152_6 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000003701 170.0
PJS3_k127_493152_7 Redoxin K02199 - - 0.00000000000000000000000001669 115.0
PJS3_k127_493152_8 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.00001261 49.0
PJS3_k127_4934723_0 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000000000000000000000000000000004025 233.0
PJS3_k127_4934723_1 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000000000000002419 212.0
PJS3_k127_4950758_0 Aminotransferase K14261 - - 9.879e-196 618.0
PJS3_k127_4950758_1 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 523.0
PJS3_k127_4950758_2 COG1494 Fructose-1,6-bisphosphatase sedoheptulose 1,7-bisphosphatase and related proteins K11532 - 3.1.3.11,3.1.3.37 0.00000000000000000000000000000000000000000000000000000002967 199.0
PJS3_k127_4950758_3 OmpA family - - - 0.00000003876 55.0
PJS3_k127_5050799_0 Domain of unknown function (DUF4445) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009019 610.0
PJS3_k127_5050799_1 COG0685 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 357.0
PJS3_k127_505659_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 2.383e-196 619.0
PJS3_k127_505659_1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008141 443.0
PJS3_k127_505659_2 malonyl CoA-acyl carrier protein transacylase K00645,K15327 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 413.0
PJS3_k127_505659_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 358.0
PJS3_k127_505659_4 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006965 361.0
PJS3_k127_505659_5 Cache domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007243 360.0
PJS3_k127_505659_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000000000001559 134.0
PJS3_k127_505659_7 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000006124 128.0
PJS3_k127_5059414_0 CHASE2 K01768 - 4.6.1.1 4.394e-204 659.0
PJS3_k127_5076084_0 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 7.677e-196 617.0
PJS3_k127_5076084_1 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 370.0
PJS3_k127_5076084_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000001312 64.0
PJS3_k127_5082432_0 Phospholipase_D-nuclease N-terminal K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000511 361.0
PJS3_k127_5082432_1 Pfam:UPF0118 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002271 248.0
PJS3_k127_5082530_0 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000006331 136.0
PJS3_k127_5082530_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000001678 130.0
PJS3_k127_5082530_2 Membrane transport protein MerF K19058 - - 0.00000000000000009031 89.0
PJS3_k127_5082530_4 glycosyl transferase group 1 - - - 0.000000000002365 68.0
PJS3_k127_5092002_0 helicase superfamily c-terminal domain K03732,K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 521.0
PJS3_k127_5092002_1 - - - - 0.000000000003013 76.0
PJS3_k127_5092002_2 - - - - 0.0008296 49.0
PJS3_k127_5097992_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 1.295e-227 721.0
PJS3_k127_5097992_1 ABC-type polar amino acid transport system ATPase component K02028,K09972 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007195 461.0
PJS3_k127_5097992_2 ABC-type amino acid transport system permease component K09971 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 372.0
PJS3_k127_5097992_3 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 310.0
PJS3_k127_5097992_4 NMT1-like family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007263 293.0
PJS3_k127_5097992_5 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002454 276.0
PJS3_k127_5097992_6 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000004296 237.0
PJS3_k127_5097992_7 binding-protein-dependent transport K09970 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000001455 176.0
PJS3_k127_509807_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 4.23e-257 799.0
PJS3_k127_509807_1 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 368.0
PJS3_k127_509807_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002495 256.0
PJS3_k127_5112477_0 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 1.721e-200 631.0
PJS3_k127_5112477_1 COG5387 Chaperone required for the assembly of the mitochondrial F1-ATPase - - - 0.00000000000000000000000000000000000000000000000000000088 199.0
PJS3_k127_5112477_2 diguanylate cyclase - - - 0.0000233 55.0
PJS3_k127_5125955_0 FAD dependent oxidoreductase central domain K19191 - 1.5.3.19 0.0 1313.0
PJS3_k127_5125955_1 Belongs to the GcvT family K19191 - 1.5.3.19 2.036e-314 976.0
PJS3_k127_5145232_0 COG4235 Cytochrome c biogenesis factor K02200 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 316.0
PJS3_k127_5145232_1 transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004141 312.0
PJS3_k127_5145232_2 periplasmic protein thiol disulfide K02199 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000003043 186.0
PJS3_k127_5145232_3 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000000000000000006937 173.0
PJS3_k127_5145232_4 protocatechuate 3,4-dioxygenase K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000537 168.0
PJS3_k127_5145232_5 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.00000000000005898 81.0
PJS3_k127_5148401_0 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 1.217e-310 969.0
PJS3_k127_5148401_1 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009787 347.0
PJS3_k127_5148401_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300,K08301 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000001028 213.0
PJS3_k127_5154859_0 - - - - 0.0000000000000000000000000000000000000000000000000000000241 205.0
PJS3_k127_5154859_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000002254 192.0
PJS3_k127_5154859_2 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000002699 136.0
PJS3_k127_5154859_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000007565 140.0
PJS3_k127_5154859_4 receptor - - - 0.000000005574 58.0
PJS3_k127_5182806_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 4.749e-218 689.0
PJS3_k127_5182806_1 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 301.0
PJS3_k127_5182806_2 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000009452 147.0
PJS3_k127_5192031_0 FeS assembly protein SufB K09014 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009536,GO:0009842,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 - 1.098e-209 653.0
PJS3_k127_5192031_1 ABC transporter K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 379.0
PJS3_k127_5192031_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005653 346.0
PJS3_k127_5192031_3 Uncharacterized protein family (UPF0051) K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000001071 243.0
PJS3_k127_5206744_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019464,GO:0019752,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.4.2 0.0 1224.0
PJS3_k127_5206744_1 TENA/THI-4/PQQC family K03707 - 3.5.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000001707 249.0
PJS3_k127_5207703_0 malic enzyme K00029 - 1.1.1.40 1.214e-289 903.0
PJS3_k127_5207703_1 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007147 310.0
PJS3_k127_5210548_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 428.0
PJS3_k127_5210548_1 COG0834 ABC-type amino acid transport signal transduction systems, periplasmic component domain K02030 - - 0.00000000000000000000000000000000000000000000003668 179.0
PJS3_k127_5210548_2 YGGT family K02221 - - 0.0000000000000000000000002481 111.0
PJS3_k127_5210548_3 Belongs to the UPF0235 family K09131 - - 0.00000000000000002503 88.0
PJS3_k127_5210548_4 EamA-like transporter family - - - 0.00000000001281 66.0
PJS3_k127_5210813_0 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 447.0
PJS3_k127_5210813_1 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008553 437.0
PJS3_k127_5210813_2 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 432.0
PJS3_k127_5210813_3 COG0747 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005375 253.0
PJS3_k127_5213799_0 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004993 364.0
PJS3_k127_5213799_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001193 269.0
PJS3_k127_5223786_0 COG0656 Aldo keto reductases, related to diketogulonate reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 395.0
PJS3_k127_5223786_1 Transcriptional regulatory protein, C terminal K14981 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000409 248.0
PJS3_k127_5223786_2 - - - - 0.000000007649 66.0
PJS3_k127_524007_0 nitrite reductase [NAD(P)H] activity K15762 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009172 308.0
PJS3_k127_524007_1 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001789 276.0
PJS3_k127_524007_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000007547 214.0
PJS3_k127_524007_3 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.000000000000000000000000000000000000000000000000001034 187.0
PJS3_k127_524619_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 1.085e-196 621.0
PJS3_k127_524619_1 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 - 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 434.0
PJS3_k127_524619_10 - - - - 0.0000000002707 67.0
PJS3_k127_524619_11 Bacterial protein of unknown function (DUF898) - - - 0.00000109 53.0
PJS3_k127_524619_2 poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 340.0
PJS3_k127_524619_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004826 271.0
PJS3_k127_524619_4 Cytochrome C1 family K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002861 274.0
PJS3_k127_524619_5 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000009072 227.0
PJS3_k127_524619_6 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000006385 196.0
PJS3_k127_524619_7 Protein of unknown function (DUF1285) K09986 - - 0.0000000000000000000000000000000000000000000000000222 188.0
PJS3_k127_524619_8 GDSL-like Lipase/Acylhydrolase - - - 0.0000000000000000000000000000000000000000000003836 179.0
PJS3_k127_524619_9 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000406 109.0
PJS3_k127_5252195_0 COG0480 Translation elongation factors (GTPases) K02355 - - 4.944e-240 760.0
PJS3_k127_5252195_1 COG3909 Cytochrome c556 - - - 0.00000000001104 68.0
PJS3_k127_5252308_0 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 610.0
PJS3_k127_5252308_1 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 569.0
PJS3_k127_5256679_0 COG2202 FOG PAS PAC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005838 389.0
PJS3_k127_5256679_1 Uncharacterised protein conserved in bacteria (DUF2336) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 344.0
PJS3_k127_5256679_2 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.000000000000000000007484 94.0
PJS3_k127_5260574_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 407.0
PJS3_k127_5260574_1 Di-haem cytochrome c peroxidase K00428 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 374.0
PJS3_k127_5260574_2 Cupredoxin-like domain - - - 0.00004968 51.0
PJS3_k127_5260574_3 His Kinase A (phosphoacceptor) domain - - - 0.0004643 49.0
PJS3_k127_5266248_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 2.423e-240 752.0
PJS3_k127_5266248_1 Cation efflux family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001165 265.0
PJS3_k127_5266248_2 Pyridoxamine 5'-phosphate oxidase K07226 - - 0.00000000000000000000000000000000000000000000000000004696 192.0
PJS3_k127_5266248_3 transmembrane signaling receptor activity K03406,K06595 GO:0003674,GO:0005488,GO:0006935,GO:0007154,GO:0007165,GO:0008150,GO:0009453,GO:0009454,GO:0009605,GO:0009987,GO:0020037,GO:0023052,GO:0040011,GO:0042221,GO:0042330,GO:0046906,GO:0048037,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0097159,GO:1901363 - 0.000000000000000000000002484 116.0
PJS3_k127_5266248_4 - - - - 0.000000000000002779 85.0
PJS3_k127_5277072_0 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 596.0
PJS3_k127_5277072_1 EamA-like transporter family K15269 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 334.0
PJS3_k127_5277072_2 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001392 253.0
PJS3_k127_5277072_3 helix_turn_helix multiple antibiotic resistance protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000001416 216.0
PJS3_k127_5277072_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000001929 224.0
PJS3_k127_5277072_5 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000003172 171.0
PJS3_k127_527924_0 DnaJ-class molecular chaperone - - - 0.0000000000000000000000000000000000000000000000000000000000003336 221.0
PJS3_k127_527924_1 methyltransferase K18897 - 2.1.1.157 0.00000000000000000000000000000000000000000000000001257 190.0
PJS3_k127_527924_2 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0000000000000000000000000000000000000000000000003179 179.0
PJS3_k127_527924_3 Helix-turn-helix domain - - - 0.00000000000000000000000000000000003879 137.0
PJS3_k127_527924_4 - - - - 0.000000000000000000000000000000003332 138.0
PJS3_k127_5294264_0 Ornithine cyclodeaminase/mu-crystallin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 484.0
PJS3_k127_5294264_1 Aromatic amino acid lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005439 333.0
PJS3_k127_5294264_2 Fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000003746 182.0
PJS3_k127_5294264_3 PAS domain - - - 0.00000006147 61.0
PJS3_k127_5306040_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 511.0
PJS3_k127_5306040_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K01782,K01825 - 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 373.0
PJS3_k127_5306040_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003641 263.0
PJS3_k127_5306040_3 oxidoreductase K06955 - - 0.0000000000000000000001071 109.0
PJS3_k127_5306040_4 Tetratricopeptide repeat - - - 0.0000000000000000000158 96.0
PJS3_k127_5306040_5 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.00000009992 56.0
PJS3_k127_5328599_0 Belongs to the HpcH HpaI aldolase family K08691 - 4.1.3.24,4.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 397.0
PJS3_k127_5328599_1 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004142 255.0
PJS3_k127_5328599_2 recombinase XerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000009276 207.0
PJS3_k127_535591_0 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006321 295.0
PJS3_k127_5392118_0 Molydopterin dinucleotide binding domain K00372,K02567 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0048037,GO:0051536,GO:0051540,GO:0055114 - 0.0 1467.0
PJS3_k127_5392118_1 NapC/NirT cytochrome c family, N-terminal region K02569,K03532 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009889 336.0
PJS3_k127_5392118_2 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.000000000000000000000000000000000000000000000009828 178.0
PJS3_k127_5392118_3 Electron transfer subunit of the periplasmic nitrate reductase complex NapAB K02568 - - 0.0000000000000000000000000000000000000000000002106 179.0
PJS3_k127_5392118_4 Cyclic nucleotide-monophosphate binding domain K21563 - - 0.000000000000000000000000000000000000001826 154.0
PJS3_k127_5392118_5 protein involved in formation of periplasmic nitrate reductase K02570 - - 0.0000000000003743 73.0
PJS3_k127_5392118_6 Nitrate reductase K02571 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000003316 67.0
PJS3_k127_5397003_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 509.0
PJS3_k127_5397003_1 Riboflavin synthase alpha chain K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000003377 223.0
PJS3_k127_5397003_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000007211 184.0
PJS3_k127_5397003_3 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000001022 141.0
PJS3_k127_5397003_4 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000004158 100.0
PJS3_k127_5400097_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 426.0
PJS3_k127_5400097_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 420.0
PJS3_k127_5400097_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 367.0
PJS3_k127_5400097_3 structural constituent of ribosome K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 331.0
PJS3_k127_5400097_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 314.0
PJS3_k127_5400097_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000002244 248.0
PJS3_k127_5400097_6 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000281 166.0
PJS3_k127_5400097_7 DNA polymerase K02337 - 2.7.7.7 0.0000000000000000000000000000000001252 138.0
PJS3_k127_5404817_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 9.553e-211 662.0
PJS3_k127_5404817_1 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004112 261.0
PJS3_k127_5407955_0 PFAM NAD dependent epimerase dehydratase family K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 442.0
PJS3_k127_5407955_1 Oxidative deamination of D-amino acids - - - 0.000000000000000000000000000000000000000000000000000000005324 206.0
PJS3_k127_5407955_2 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000001093 129.0
PJS3_k127_5410399_0 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 466.0
PJS3_k127_5410399_1 Cytochrome c - - - 0.0000000000000000004144 92.0
PJS3_k127_5416978_0 COG1960 Acyl-CoA dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003377 578.0
PJS3_k127_5416978_1 Enoyl-CoA hydratase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 292.0
PJS3_k127_5416978_2 - - - - 0.0000000000000000000000000000000000000000000001442 183.0
PJS3_k127_5424664_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 8.661e-199 631.0
PJS3_k127_5424664_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 6.611e-196 621.0
PJS3_k127_5424664_2 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 381.0
PJS3_k127_5424664_3 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004807 367.0
PJS3_k127_5424664_4 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001926 251.0
PJS3_k127_5424664_5 Colicin V production protein K03558 - - 0.00000000000000000008875 98.0
PJS3_k127_5438775_0 Belongs to the 5'-nucleotidase family K17224 - - 1.311e-249 783.0
PJS3_k127_5438775_1 Mo-co oxidoreductase dimerisation domain K17225 - - 2.989e-222 697.0
PJS3_k127_5438775_10 - - - - 0.000000000000001835 87.0
PJS3_k127_5438775_2 cytochrome K08738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005855 363.0
PJS3_k127_5438775_3 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005623,GO:0006091,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009055,GO:0009987,GO:0016491,GO:0016667,GO:0016669,GO:0016740,GO:0016782,GO:0016783,GO:0018192,GO:0018193,GO:0018198,GO:0018307,GO:0019417,GO:0019418,GO:0019538,GO:0020037,GO:0022900,GO:0032991,GO:0036211,GO:0042597,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046872,GO:0046906,GO:0046914,GO:0046982,GO:0046983,GO:0048037,GO:0055114,GO:0070069,GO:0071704,GO:0097159,GO:0098822,GO:1901363,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 334.0
PJS3_k127_5438775_4 Cytochrome c biogenesis protein K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 294.0
PJS3_k127_5438775_5 Thioredoxin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000672 226.0
PJS3_k127_5438775_6 Sulphur oxidation protein SoxZ K17227 - - 0.000000000000000000000000000000000000000000002796 166.0
PJS3_k127_5438775_7 sulfur oxidation protein soxY K17226 - - 0.0000000000000000000000000000000000000000002142 163.0
PJS3_k127_5438775_8 cytochrome c K17223 - - 0.0000000000000000000000000000000000000002953 155.0
PJS3_k127_5438775_9 Regulatory protein SoxS - - - 0.00000000000000000000000000000000455 132.0
PJS3_k127_5448901_0 Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007982 571.0
PJS3_k127_5448901_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000001036 138.0
PJS3_k127_545528_0 AMP-binding enzyme C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000169 207.0
PJS3_k127_545528_1 Nitroreductase family - - - 0.000000000000000000000000000000000000000000001548 171.0
PJS3_k127_545528_2 Chorismate mutase type II K04782 - 4.2.99.21 0.0000000000000000000000584 102.0
PJS3_k127_545528_3 Rhomboid family - - - 0.000000000000000000000076 108.0
PJS3_k127_5456994_0 Phytoene dehydrogenase - - - 1.787e-197 626.0
PJS3_k127_5456994_1 Flavin containing amine oxidoreductase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004956 378.0
PJS3_k127_5456994_2 Belongs to the GcvT family K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000308 373.0
PJS3_k127_5456994_3 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 343.0
PJS3_k127_5456994_4 MFS_1 like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001013 290.0
PJS3_k127_5474947_0 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 435.0
PJS3_k127_5474947_1 Alpha/beta hydrolase family K01561 - 3.8.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000001686 250.0
PJS3_k127_5474947_2 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0015976,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036307,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.266 0.0000000000001398 74.0
PJS3_k127_5481900_0 Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001825 296.0
PJS3_k127_5481900_1 glycosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000008729 241.0
PJS3_k127_5481900_2 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000003865 216.0
PJS3_k127_5481900_3 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000001259 200.0
PJS3_k127_5481900_4 - - - - 0.00000000006654 66.0
PJS3_k127_5493767_0 Branched-chain amino acid aminotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001038 282.0
PJS3_k127_5493767_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001275 286.0
PJS3_k127_5493767_2 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001092 277.0
PJS3_k127_5493767_3 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000118 176.0
PJS3_k127_5501522_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 1.652e-314 973.0
PJS3_k127_5501522_1 Histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 558.0
PJS3_k127_5511947_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 8.941e-238 739.0
PJS3_k127_5511947_1 Flavin-binding monooxygenase-like - - - 3.284e-205 649.0
PJS3_k127_5511947_2 Metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 524.0
PJS3_k127_5511947_3 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 358.0
PJS3_k127_5511947_4 Male sterility protein K22025 - 1.1.1.410 0.00000000000000000000000000000005569 128.0
PJS3_k127_5533649_0 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000000000000000000000000000000000000000000000001235 239.0
PJS3_k127_5533649_1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00499 - 1.14.15.7 0.0000000000000000000000000000000000000000000000000000000000000001565 225.0
PJS3_k127_553806_0 MlrC C-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004626 575.0
PJS3_k127_553806_1 Peptidase family S58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005424 339.0
PJS3_k127_553806_2 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 286.0
PJS3_k127_553806_3 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000004742 199.0
PJS3_k127_553806_4 Signal transduction histidine kinase - - - 0.000000000000000001197 87.0
PJS3_k127_553806_5 FecR protein - - - 0.000000000000000003025 93.0
PJS3_k127_553806_6 - - - - 0.00000000000006993 79.0
PJS3_k127_5550797_0 CoA binding domain - - - 8.573e-194 628.0
PJS3_k127_5550797_1 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000605 541.0
PJS3_k127_5550797_2 Belongs to the enoyl-CoA hydratase isomerase family K08299 - 4.2.1.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005387 378.0
PJS3_k127_5550797_3 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000003554 178.0
PJS3_k127_5630249_0 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000002282 257.0
PJS3_k127_5630249_1 LysE type translocator - - - 0.000000000000000000000000000000000000000000005716 170.0
PJS3_k127_5630249_2 Electron transfer flavoprotein K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.000000000000000000000000000000000000002465 147.0
PJS3_k127_5630249_3 - - - - 0.0000000000000000000000000000000003694 140.0
PJS3_k127_5630249_4 Hypoxia induced protein conserved region - - - 0.000000000000005147 77.0
PJS3_k127_5630249_5 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.00000000002985 66.0
PJS3_k127_5630249_6 Peptidase family M23 - - - 0.00000001373 64.0
PJS3_k127_5632561_0 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 526.0
PJS3_k127_5632561_1 phenylacetic acid degradation protein K02611 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000001439 269.0
PJS3_k127_5632561_2 Phenylacetate-CoA oxygenase subunit PaaB K02610 - - 0.00000000000000000000000000000000000000000005208 162.0
PJS3_k127_5643420_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15598 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 426.0
PJS3_k127_5643420_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 389.0
PJS3_k127_5643420_2 COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 302.0
PJS3_k127_5643420_3 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007035 291.0
PJS3_k127_5643420_4 ABC transporter K15600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002523 252.0
PJS3_k127_5643420_5 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000008973 186.0
PJS3_k127_5643420_6 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway K03707 - 3.5.99.2 0.000002725 49.0
PJS3_k127_5661048_0 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 429.0
PJS3_k127_5661048_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576 - 0.000000000000000000000000000000000000000000002327 170.0
PJS3_k127_5691635_0 COG0303 Molybdopterin biosynthesis enzyme K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006302 441.0
PJS3_k127_5691635_1 COG0314 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000000000000006276 217.0
PJS3_k127_5691635_2 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.00000000000000000000000000000000000000000000000000000000008887 208.0
PJS3_k127_5691635_3 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.0000000000000000000000001525 110.0
PJS3_k127_5691635_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.00000000000000000000001672 101.0
PJS3_k127_5691635_5 Acetyltransferase (GNAT) domain - - - 0.00001063 51.0
PJS3_k127_5692548_0 ABC transporter C-terminal domain K15738 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 446.0
PJS3_k127_5692548_1 Nudix N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000005233 241.0
PJS3_k127_5692548_2 COG0457 FOG TPR repeat - - - 0.000000000000000000000000004772 120.0
PJS3_k127_5699874_0 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 329.0
PJS3_k127_5699874_1 PFAM glutathione-dependent formaldehyde-activating GFA - - - 0.0000000000000000000000000000000000002648 146.0
PJS3_k127_5699874_2 - - - - 0.00000000000000000000000000000000001271 148.0
PJS3_k127_5699874_3 Belongs to the HesB IscA family K15724 - - 0.0000000000000000000000000000000001726 137.0
PJS3_k127_5699874_4 Dehydratase family K01687 - 4.2.1.9 0.0003912 43.0
PJS3_k127_5727449_0 ATP synthase alpha/beta family, nucleotide-binding domain K02412 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008089 479.0
PJS3_k127_5727449_1 Creatinase/Prolidase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 472.0
PJS3_k127_5727449_2 - - - - 0.0000000000000000000000000000018 138.0
PJS3_k127_5727449_3 - - - - 0.00000000000000001173 88.0
PJS3_k127_5727449_4 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) - - - 0.000000000000001036 85.0
PJS3_k127_5731085_0 Belongs to the GcvT family K00315 - 1.5.8.4 0.0 1194.0
PJS3_k127_5731085_1 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000002976 68.0
PJS3_k127_5763869_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1312.0
PJS3_k127_5763869_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000008211 239.0
PJS3_k127_5782678_0 Creatinase/Prolidase N-terminal domain K08688 - 3.5.3.3 6.356e-205 644.0
PJS3_k127_5782678_1 Lipoprotein releasing system transmembrane protein LolC K09808 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008104,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0034613,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0070727,GO:0071944,GO:0072657,GO:0098796,GO:0098797 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 439.0
PJS3_k127_5782678_2 Phytanoyl-CoA dioxygenase (PhyH) K10674 - 1.14.11.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 373.0
PJS3_k127_5782678_3 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K05685,K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001549 284.0
PJS3_k127_5782678_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000006867 194.0
PJS3_k127_5782678_5 transcriptional regulator K08365 - - 0.0000009366 51.0
PJS3_k127_5786952_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007393 323.0
PJS3_k127_5786952_1 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000342 280.0
PJS3_k127_5786952_2 methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000008813 164.0
PJS3_k127_5786952_3 Acetyltransferase (GNAT) family - - - 0.00000000000000002748 88.0
PJS3_k127_5786952_4 COG1520 FOG WD40-like repeat K17713 - - 0.00001019 58.0
PJS3_k127_5788157_0 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006365 314.0
PJS3_k127_5788157_1 Cytochrome c K08738 - - 0.00000000000000000000009232 101.0
PJS3_k127_5794552_0 oligoendopeptidase F K08602 - - 5.489e-239 747.0
PJS3_k127_5794552_1 Alpha beta hydrolase K00433 - 1.11.1.10 0.0000000000000000000000000503 112.0
PJS3_k127_5822772_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 1.434e-199 638.0
PJS3_k127_5822772_1 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01907 - 6.2.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004802 537.0
PJS3_k127_5822772_10 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000001344 110.0
PJS3_k127_5822772_2 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 GO:0003674,GO:0003824,GO:0003924,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 409.0
PJS3_k127_5822772_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007072 403.0
PJS3_k127_5822772_4 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008609 401.0
PJS3_k127_5822772_5 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01907 - 6.2.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006236 383.0
PJS3_k127_5822772_6 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002615 263.0
PJS3_k127_5822772_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000003681 232.0
PJS3_k127_5822772_8 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000276 198.0
PJS3_k127_5822772_9 - - - - 0.0000000000000000000000000000004058 137.0
PJS3_k127_5855636_0 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006905 340.0
PJS3_k127_5861110_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005752 264.0
PJS3_k127_5861110_1 Deoxyribodipyrimidine photo-lyase-related protein K06876 GO:0000166,GO:0000719,GO:0003674,GO:0003824,GO:0003913,GO:0003914,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006290,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0033554,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0071949,GO:0090304,GO:0097159,GO:0140097,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000254 246.0
PJS3_k127_5861110_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768,K09565 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000001092 222.0
PJS3_k127_5886743_0 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 332.0
PJS3_k127_5886743_1 Integral membrane protein (DUF2244) - - - 0.0000000000000000000000000000000000000002121 155.0
PJS3_k127_5886743_2 Thioesterase superfamily - - - 0.00000000000000000000000000000000000002319 149.0
PJS3_k127_5886743_3 - - - - 0.0000007089 57.0
PJS3_k127_5905799_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1145.0
PJS3_k127_591037_0 COG2113 ABC-type proline glycine betaine transport systems periplasmic components K02002 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000731 540.0
PJS3_k127_591037_1 DeoR C terminal sensor domain K02444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 293.0
PJS3_k127_591037_2 Choline kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002643 250.0
PJS3_k127_5920848_0 chaperone TorD - - - 0.000000000000000000000000000000000000000000000000005676 190.0
PJS3_k127_5920848_1 Protein of unknown function (DUF3305) - - - 0.000000000000000000000000000000000000001757 154.0
PJS3_k127_5920848_2 Protein of unknown function (DUF3306) - - - 0.00000000000000000000000000226 121.0
PJS3_k127_5935335_0 AMP-binding enzyme C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009655 525.0
PJS3_k127_5935335_1 Nitronate monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007094 481.0
PJS3_k127_5935335_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009405 330.0
PJS3_k127_5956541_0 Xaa-Pro aminopeptidase - GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0016829,GO:0016846,GO:0042802,GO:0042803,GO:0046983,GO:0047869 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 497.0
PJS3_k127_5956541_1 Phosphohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002112 267.0
PJS3_k127_5956541_2 EamA-like transporter family K15270 - - 0.0000000000000000000000000000000000000000000000155 180.0
PJS3_k127_5975529_0 Fumarate hydratase (Fumerase) K01677,K03779 - 4.2.1.2,4.2.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 539.0
PJS3_k127_5975529_1 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00244 - 1.3.5.4 0.0000000000000000000000000000004643 124.0
PJS3_k127_5975529_2 Fumarase C-terminus K01678,K03780 - 4.2.1.2,4.2.1.32 0.00000000000000004696 93.0
PJS3_k127_5991360_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.084e-305 950.0
PJS3_k127_5991360_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 385.0
PJS3_k127_5991360_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 316.0
PJS3_k127_5991360_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000001083 229.0
PJS3_k127_5991360_4 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.0000000000000000000000000000000000000000005642 164.0
PJS3_k127_5991360_5 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000000000001468 158.0
PJS3_k127_5991360_6 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000001043 111.0
PJS3_k127_599186_0 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001457 278.0
PJS3_k127_599186_1 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002364 265.0
PJS3_k127_599186_2 Protein of unknown function (DUF1326) - - - 0.0000000000000000000000000000000000000000000000001173 186.0
PJS3_k127_599186_3 Protein of unknown function (DUF1800) - - - 0.00000000001655 67.0
PJS3_k127_5992188_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 9.013e-219 695.0
PJS3_k127_5992188_1 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006781 605.0
PJS3_k127_5992188_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256 - 2.6.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 599.0
PJS3_k127_6005211_0 Phosphate K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 341.0
PJS3_k127_6005211_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005481 280.0
PJS3_k127_6005211_2 nUDIX hydrolase K08296 - - 0.0000000000000000007101 92.0
PJS3_k127_6005211_3 - - - - 0.000001563 53.0
PJS3_k127_6007396_0 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000004659 218.0
PJS3_k127_6007396_1 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.000000000000000000000000000000000000000000000000000000001671 208.0
PJS3_k127_6007396_2 Protein of unknown function (DUF861) - - - 0.0000000000000000000000000000000000000000000095 168.0
PJS3_k127_6007396_4 Pirin K06911 - - 0.000000000000000001547 87.0
PJS3_k127_6008406_0 Belongs to the prokaryotic GSH synthase family K01920 GO:0003674,GO:0003824,GO:0004363,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0019184,GO:0034641,GO:0042398,GO:0043043,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044424,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901564,GO:1901566,GO:1901576 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004768 468.0
PJS3_k127_6008406_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 295.0
PJS3_k127_6008406_2 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002071 266.0
PJS3_k127_6008406_3 periplasmic or secreted lipoprotein - - - 0.00000000000000000000000000000000000002182 153.0
PJS3_k127_6008406_4 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000000001009 130.0
PJS3_k127_6008406_5 ATPase with chaperone activity K07391 - - 0.00000000000000000001152 93.0
PJS3_k127_6010809_0 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 514.0
PJS3_k127_6010809_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 372.0
PJS3_k127_6010809_2 COG1145 Ferredoxin - - - 0.00000000000000000000000000000000000000000000000000000000005739 214.0
PJS3_k127_6010809_3 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000009807 196.0
PJS3_k127_6010809_4 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0001209 45.0
PJS3_k127_6015843_0 ABC transporter K15738 - - 5.868e-269 837.0
PJS3_k127_6015843_1 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 509.0
PJS3_k127_6015843_2 Chromate resistance exported protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 386.0
PJS3_k127_6015843_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 314.0
PJS3_k127_6015843_4 D-isomer specific 2-hydroxyacid dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007411 252.0
PJS3_k127_6015843_5 Major Facilitator Superfamily - - - 0.0000197 50.0
PJS3_k127_6030914_0 Function of homologous gene experimentally demonstrated in an other organism K03407 - 2.7.13.3 5.977e-292 930.0
PJS3_k127_6030914_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001867 291.0
PJS3_k127_6030914_2 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000000007525 197.0
PJS3_k127_6030914_3 Dehydrogenase K00122 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000001869 189.0
PJS3_k127_6030914_4 Histidine phosphotransferase C-terminal domain K13588 - - 0.0000000000000000000000000000003526 130.0
PJS3_k127_6030914_5 Protein of unknown function (DUF3553) - - - 0.0000000000000001203 82.0
PJS3_k127_6032895_0 PFAM FAD binding domain of DNA photolyase K01669 GO:0000003,GO:0000166,GO:0000719,GO:0001101,GO:0002252,GO:0002376,GO:0003006,GO:0003674,GO:0003824,GO:0003904,GO:0003913,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005773,GO:0006139,GO:0006259,GO:0006281,GO:0006290,GO:0006325,GO:0006338,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007623,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009314,GO:0009414,GO:0009415,GO:0009416,GO:0009605,GO:0009606,GO:0009607,GO:0009615,GO:0009628,GO:0009637,GO:0009638,GO:0009642,GO:0009645,GO:0009646,GO:0009648,GO:0009719,GO:0009725,GO:0009785,GO:0009791,GO:0009881,GO:0009882,GO:0009888,GO:0009893,GO:0009909,GO:0009911,GO:0009987,GO:0010033,GO:0010035,GO:0010073,GO:0010075,GO:0010118,GO:0010228,GO:0010244,GO:0010617,GO:0014070,GO:0016043,GO:0016604,GO:0016829,GO:0016830,GO:0017076,GO:0019222,GO:0019637,GO:0019725,GO:0022414,GO:0022603,GO:0023052,GO:0030003,GO:0030522,GO:0030554,GO:0031323,GO:0031325,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0033993,GO:0034641,GO:0035639,GO:0036094,GO:0038023,GO:0040008,GO:0042221,GO:0042592,GO:0042726,GO:0042752,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0048037,GO:0048507,GO:0048509,GO:0048511,GO:0048518,GO:0048522,GO:0048571,GO:0048573,GO:0048574,GO:0048580,GO:0048582,GO:0048583,GO:0048608,GO:0048638,GO:0048731,GO:0048831,GO:0048856,GO:0048878,GO:0050660,GO:0050662,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051094,GO:0051186,GO:0051239,GO:0051240,GO:0051276,GO:0051480,GO:0051607,GO:0051704,GO:0051707,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055086,GO:0060089,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0071214,GO:0071478,GO:0071482,GO:0071483,GO:0071704,GO:0071840,GO:0071949,GO:0072387,GO:0072503,GO:0072507,GO:0090304,GO:0097159,GO:0097367,GO:0098542,GO:0098771,GO:0104004,GO:0140097,GO:1900618,GO:1901265,GO:1901360,GO:1901363,GO:1901371,GO:1901564,GO:1901700,GO:1902347,GO:1905421,GO:2000024,GO:2000026,GO:2000028,GO:2000241,GO:2000243,GO:2000377,GO:2000379 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 559.0
PJS3_k127_6032895_1 Calcineurin-like phosphoesterase K06953 - - 0.00000000000000000005006 91.0
PJS3_k127_6032895_2 Flavin containing amine oxidoreductase K06954 - - 0.0000000000000006062 78.0
PJS3_k127_6039451_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.563e-261 811.0
PJS3_k127_6039451_1 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 368.0
PJS3_k127_6039451_2 Bacterial regulatory helix-turn-helix protein, lysR family K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 357.0
PJS3_k127_6039451_3 ATP synthase K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001148 284.0
PJS3_k127_6039451_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000000000000001771 202.0
PJS3_k127_6039451_5 Domain of Unknown Function (DUF350) K08989 - - 0.00000000000000000000000000001732 123.0
PJS3_k127_6039451_6 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.0000003145 58.0
PJS3_k127_6042830_0 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 535.0
PJS3_k127_6042830_1 - - - - 0.00000000003478 72.0
PJS3_k127_6042830_2 PFAM MgtE intracellular - - - 0.000002355 56.0
PJS3_k127_6057150_0 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009817 546.0
PJS3_k127_6057150_1 COG0402 Cytosine deaminase and related metal-dependent hydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 503.0
PJS3_k127_6057150_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 371.0
PJS3_k127_6059164_0 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 294.0
PJS3_k127_6059164_1 Nitrogen fixation protein fixG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003216 280.0
PJS3_k127_6059164_2 Nitrogen fixation protein fixG - - - 0.000000000000000000000000000000000000000000000000000000000000003421 230.0
PJS3_k127_6065511_0 FAD dependent oxidoreductase central domain K19191 - 1.5.3.19 1.648e-235 739.0
PJS3_k127_6065511_1 COG3591 V8-like Glu-specific endopeptidase K04775 - - 0.00000000000000000000000000000000000000000000000002966 190.0
PJS3_k127_6071100_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 612.0
PJS3_k127_6071100_1 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 334.0
PJS3_k127_6082328_0 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 611.0
PJS3_k127_6082328_1 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002134 245.0
PJS3_k127_6082328_2 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000009346 151.0
PJS3_k127_6104477_0 AMP-binding enzyme C-terminal domain K08295 - 6.2.1.32 9.609e-225 716.0
PJS3_k127_6104477_1 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007851 500.0
PJS3_k127_6104477_2 COG1024 Enoyl-CoA hydratase carnithine racemase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 391.0
PJS3_k127_6104477_3 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004717 305.0
PJS3_k127_6104477_4 Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001117 264.0
PJS3_k127_6104477_5 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000204 149.0
PJS3_k127_6107468_0 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 490.0
PJS3_k127_6107468_1 Belongs to the mandelate racemase muconate lactonizing enzyme family K19802 - 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 407.0
PJS3_k127_6107468_2 transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 425.0
PJS3_k127_6107468_3 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000146 286.0
PJS3_k127_6107468_4 soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.0000000000000000000000000000000000000000000000005958 181.0
PJS3_k127_6113743_0 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009896 298.0
PJS3_k127_6113743_1 Serine kinase of the HPr protein, regulates carbohydrate metabolism - - - 0.0000000000000000000000000000000005027 137.0
PJS3_k127_6124941_0 peptidase U62, modulator of DNA gyrase K03568 - - 7.924e-216 678.0
PJS3_k127_6124941_1 Protein of unknown function (DUF3422) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 425.0
PJS3_k127_6158094_0 FIST_C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 349.0
PJS3_k127_6158094_1 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 308.0
PJS3_k127_6158094_2 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 298.0
PJS3_k127_6158094_3 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000007063 237.0
PJS3_k127_6158094_4 Aldo/keto reductase family - - - 0.000000000000000000000005166 109.0
PJS3_k127_6160462_0 LrgB-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 301.0
PJS3_k127_6160462_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005925 285.0
PJS3_k127_6160462_2 LrgA family K06518 - - 0.0000000000000000000000001234 110.0
PJS3_k127_6160462_3 - - - - 0.000000004617 62.0
PJS3_k127_6165706_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 9.429e-228 715.0
PJS3_k127_6165706_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 1.448e-216 682.0
PJS3_k127_6165706_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 341.0
PJS3_k127_6165706_3 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000001464 204.0
PJS3_k127_6165706_4 rRNA methylase K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000004097 169.0
PJS3_k127_6165706_5 - - - - 0.00000000000000000000000000000000000000000006127 164.0
PJS3_k127_6165706_6 - - - - 0.000000000000000000000000000000000000000113 156.0
PJS3_k127_6165706_7 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000663 133.0
PJS3_k127_6165706_8 - - - - 0.000007199 51.0
PJS3_k127_6174822_0 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 4.145e-288 893.0
PJS3_k127_6174822_1 Sulfite reductase K00381 - 1.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 432.0
PJS3_k127_6174822_2 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006995 419.0
PJS3_k127_6174822_3 Ornithine cyclodeaminase/mu-crystallin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009236 376.0
PJS3_k127_6174822_4 Succinylglutamate desuccinylase / Aspartoacylase family K06987,K15784 - 3.5.1.125 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 370.0
PJS3_k127_6174822_5 Protein of unknown function (DUF2849) - - - 0.00000000000000000006474 93.0
PJS3_k127_6204601_0 Required for the activity of the bacterial periplasmic transport system of putrescine K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 572.0
PJS3_k127_6204601_1 Binding-protein-dependent transport system inner membrane component K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000997 458.0
PJS3_k127_6204601_2 Binding-protein-dependent transport system inner membrane component K11070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 377.0
PJS3_k127_6204601_3 import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007172 341.0
PJS3_k127_6213585_0 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 445.0
PJS3_k127_6213585_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000002616 180.0
PJS3_k127_6213585_2 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000001283 53.0
PJS3_k127_6221795_0 EAL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 396.0
PJS3_k127_6221795_1 Bacterial transglutaminase-like cysteine proteinase BTLCP - - - 0.00000000000000000000000000000000000000000000002433 179.0
PJS3_k127_6221795_2 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000001849 139.0
PJS3_k127_6247449_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 486.0
PJS3_k127_6247449_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 322.0
PJS3_k127_6247449_2 Lipid A 3-O-deacylase (PagL) - - - 0.0000000000000000000000000000000000000000000000000000000001455 207.0
PJS3_k127_6247449_3 surface antigen - - - 0.0000000000000000000000000000000000000000000000001822 184.0
PJS3_k127_6247449_4 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000000000000001009 146.0
PJS3_k127_6248595_0 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 308.0
PJS3_k127_6248595_1 Acts on guanine, xanthine and to a lesser extent hypoxanthine K00769 - 2.4.2.22 0.000000000000000000000000000000000000000000000000000000000000000000000003398 251.0
PJS3_k127_6248595_2 alpha/beta hydrolase fold K01066 - - 0.0000000000000000000000000000000000000000000000000000000003185 210.0
PJS3_k127_6248595_3 ABC-type dipeptide oligopeptide nickel transport K02033 - - 0.00000000000000000000000000000008123 126.0
PJS3_k127_6248595_4 Domain of unknown function (DUF4864) - - - 0.0000000000000000001022 94.0
PJS3_k127_6258040_0 FHIPEP family K02400 - - 7.237e-297 925.0
PJS3_k127_6258040_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 597.0
PJS3_k127_6258040_2 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 539.0
PJS3_k127_6258040_3 The M ring may be actively involved in energy transduction K02409 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 406.0
PJS3_k127_6258040_4 MotA/TolQ/ExbB proton channel family K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007939 308.0
PJS3_k127_6258040_5 Belongs to the ParA family K04562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009784 278.0
PJS3_k127_6258040_6 Flagellar GTP-binding protein K02404 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003352 252.0
PJS3_k127_6258040_7 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.0000000000000000000000000000000000001776 145.0
PJS3_k127_6258040_8 Flagella basal body rod protein K02390 - - 0.000000000000000001491 86.0
PJS3_k127_6258040_9 COG1317 Flagellar biosynthesis type III secretory pathway protein K02411 - - 0.0000000000000005408 88.0
PJS3_k127_6267007_0 Belongs to the phosphoglycerate kinase family K00927 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000592 467.0
PJS3_k127_6267007_1 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 400.0
PJS3_k127_6267007_2 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000003611 169.0
PJS3_k127_626970_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000002957 240.0
PJS3_k127_626970_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000003889 201.0
PJS3_k127_626970_2 Iron-sulfur cluster assembly protein - - - 0.0000000000000000000000000000000000000000009221 162.0
PJS3_k127_626970_3 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000006344 156.0
PJS3_k127_627853_0 Aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009675 542.0
PJS3_k127_627853_1 Iron-containing alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 523.0
PJS3_k127_6295469_0 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009625 516.0
PJS3_k127_6295469_1 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 444.0
PJS3_k127_6295469_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 429.0
PJS3_k127_6295469_3 COG0665 Glycine D-amino acid oxidases (deaminating) K03153 - 1.4.3.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007213 425.0
PJS3_k127_6295469_4 - - - - 0.000000000301 62.0
PJS3_k127_6295469_5 ThiS family K03154 - - 0.00000003729 57.0
PJS3_k127_6318976_0 COG2274 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain K12541 - - 1.272e-247 788.0
PJS3_k127_6318976_1 TIGRFAM type I secretion membrane fusion protein, HlyD family K12542 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006689 372.0
PJS3_k127_6318976_2 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases K01426 - 3.5.1.4 0.0000000000000000005202 90.0
PJS3_k127_6326508_0 BioY family K03523 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000000000000005117 192.0
PJS3_k127_6326508_1 COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters K16783 - - 0.000000000000000000000000000000000000000000000000004558 188.0
PJS3_k127_6326508_2 ABC-type cobalt transport system, ATPase component K16784 - - 0.000000000000000000000000000000000000000000000002059 179.0
PJS3_k127_6326508_3 AMP-binding enzyme K01897 - 6.2.1.3 0.0000000000000000000629 98.0
PJS3_k127_6329732_0 TrkA-C domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 364.0
PJS3_k127_6329732_1 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009069 329.0
PJS3_k127_6329732_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000001125 73.0
PJS3_k127_6331284_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006817 317.0
PJS3_k127_6331284_1 - - - - 0.000000000000000000000000000003149 124.0
PJS3_k127_6331284_2 Cupin domain - - - 0.000000000000000000000000000006971 122.0
PJS3_k127_6347862_0 Amino acid kinase family K00928 - 2.7.2.4 5.513e-198 630.0
PJS3_k127_6347862_1 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.000000000000000000000000000000000000001105 148.0
PJS3_k127_6347862_2 Fatty acid desaturase - - - 0.000000000000000000005639 94.0
PJS3_k127_6389996_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1288.0
PJS3_k127_6389996_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000005267 222.0
PJS3_k127_6389996_2 Methyltransferase domain - - - 0.0000000000000000000000007698 107.0
PJS3_k127_6398946_0 Creatinase/Prolidase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 558.0
PJS3_k127_6407247_0 Mo-co oxidoreductase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 488.0
PJS3_k127_6407247_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.00000000000000000000000000000000000002607 145.0
PJS3_k127_6407247_2 Sigma-70, region 4 - - - 0.00000000000000000000000000000001406 135.0
PJS3_k127_6407247_3 AntiSigma factor - - - 0.0000000000000000006028 96.0
PJS3_k127_6415829_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1180.0
PJS3_k127_6415829_1 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003151 238.0
PJS3_k127_6417621_0 Acetyl propionyl-CoA carboxylase alpha subunit K01965 - 6.4.1.3 1.299e-219 693.0
PJS3_k127_6417621_1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 403.0
PJS3_k127_6417621_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000009595 193.0
PJS3_k127_6424484_0 Cysteine desulfurase K04487 GO:0000959,GO:0000963,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016782,GO:0016783,GO:0016829,GO:0016846,GO:0019725,GO:0022607,GO:0030003,GO:0031071,GO:0031163,GO:0031974,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044571,GO:0046483,GO:0046916,GO:0048878,GO:0050801,GO:0051186,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0070013,GO:0070525,GO:0070900,GO:0070903,GO:0071704,GO:0071840,GO:0090304,GO:0090646,GO:0098771,GO:0140053,GO:1900864,GO:1901360,GO:1990221 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 357.0
PJS3_k127_6424484_1 COG1104 Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 350.0
PJS3_k127_6424484_2 serine acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000011 290.0
PJS3_k127_6424484_3 hydrolase of the alpha beta superfamily K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000007509 224.0
PJS3_k127_6448844_0 MOFRL family K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005675 471.0
PJS3_k127_6448844_1 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 443.0
PJS3_k127_6448844_2 Putative transmembrane protein (Alph_Pro_TM) - - - 0.000000000000000000000000000000000000000000000000000000000000001687 226.0
PJS3_k127_6448844_3 Sulfurtransferase TusA K04085 - - 0.0000000000000000002098 89.0
PJS3_k127_6448844_4 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.000000000000000006325 85.0
PJS3_k127_6449926_0 Amidohydrolase family K06162 GO:0006793,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0019634,GO:0019637,GO:0019700,GO:0044237,GO:0046434,GO:0071704,GO:1901575 3.6.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 375.0
PJS3_k127_6449926_1 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 310.0
PJS3_k127_6449926_2 UTRA K02043 - - 0.000000000000000000000000000000000000000000000000000000000000000006225 233.0
PJS3_k127_6449926_3 Phosphonate metabolism protein - - - 0.00000000000000000000000000000000000000000000000000000000002167 218.0
PJS3_k127_6449926_4 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000000000000000000000000000002128 193.0
PJS3_k127_6449926_5 nuclear chromosome segregation - - - 0.0000000000000000000001128 115.0
PJS3_k127_65103_0 Involved in the TonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 605.0
PJS3_k127_65103_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 512.0
PJS3_k127_65103_10 Cell division and transport-associated protein TolA - - - 0.000000000000000002008 96.0
PJS3_k127_65103_2 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 326.0
PJS3_k127_65103_3 COG0811 Biopolymer transport proteins K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 310.0
PJS3_k127_65103_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000001734 229.0
PJS3_k127_65103_5 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000000000004727 201.0
PJS3_k127_65103_6 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000000001796 199.0
PJS3_k127_65103_7 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.0000000000000000000000000000000000000000000000000004406 187.0
PJS3_k127_65103_8 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000008588 165.0
PJS3_k127_65103_9 TIGRFAM acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.00000000000000000000000000000000000008556 146.0
PJS3_k127_670173_0 His Kinase A (phospho-acceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001098 280.0
PJS3_k127_670173_1 CHAP domain - - - 0.000000000000000000000000000000000000000000000000000000004363 205.0
PJS3_k127_670173_2 PFAM Glycosyl transferases group 1 - - - 0.000000000000000001897 92.0
PJS3_k127_672951_0 flagellar motor component K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006022 317.0
PJS3_k127_672951_1 flagellar motor protein K02557 - - 0.0000000000000000000000000000000000000000000000000005515 194.0
PJS3_k127_672951_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000002226 173.0
PJS3_k127_673620_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 1.434e-199 627.0
PJS3_k127_673620_1 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007515 267.0
PJS3_k127_673620_2 Domain of unknown function (DUF4115) K15539 - - 0.00000000000000000004792 98.0
PJS3_k127_687381_0 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000128 246.0
PJS3_k127_687381_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001245 254.0
PJS3_k127_687381_2 - - - - 0.000000000000000000000000000000000000000001487 166.0
PJS3_k127_687381_3 - - - - 0.0000000000000000000000002217 111.0
PJS3_k127_701389_0 AMP-binding enzyme C-terminal domain - - - 0.0 1443.0
PJS3_k127_701389_1 Fumarylacetoacetate (FAA) hydrolase family K16165 - 3.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 389.0
PJS3_k127_701389_2 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007738 384.0
PJS3_k127_701389_3 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008827 356.0
PJS3_k127_701389_4 Maleylacetoacetate isomerase K01801 - 5.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001663 274.0
PJS3_k127_718490_0 Probable molybdopterin binding domain K07141 - 2.7.7.76 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 517.0
PJS3_k127_718490_1 AAA domain (dynein-related subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 484.0
PJS3_k127_718490_2 VWA domain containing CoxE-like protein K07161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008589 458.0
PJS3_k127_718490_3 XdhC Rossmann domain K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002569 262.0
PJS3_k127_718490_4 Prolyl oligopeptidase family K06889 - - 0.00000000000000000000000000000000000000000000000000000000000005646 224.0
PJS3_k127_718490_5 Protein of unknown function (DUF1194) - - - 0.00000000000000000000000000000000000000000000000000000000004046 214.0
PJS3_k127_718490_6 XdhC and CoxI family - - - 0.0000000000000000000000000000000003338 150.0
PJS3_k127_747522_0 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 499.0
PJS3_k127_747522_1 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.000000000000000000000000000000000000000000000000000000000000000005745 231.0
PJS3_k127_747522_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000009946 166.0
PJS3_k127_757146_0 ABC 3 transport family K09816 GO:0000006,GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0010035,GO:0010038,GO:0010043,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0042221,GO:0044464,GO:0046873,GO:0046915,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 356.0
PJS3_k127_757146_1 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000005986 224.0
PJS3_k127_757146_2 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000576 212.0
PJS3_k127_757146_3 Belongs to the Fur family K09823 - - 0.0000000000000000000000000000000000000000000646 163.0
PJS3_k127_763278_0 glutamate--cysteine ligase K01919 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 581.0
PJS3_k127_763278_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000008782 74.0
PJS3_k127_78234_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 337.0
PJS3_k127_78234_1 Predicted permease YjgP/YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007049 267.0
PJS3_k127_794455_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1753.0
PJS3_k127_794455_1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.0000000000000000000000000000000000000000002071 162.0
PJS3_k127_794455_2 NADH ubiquinone oxidoreductase 17.2 kD subunit - - - 0.0000000000000000000000000000000000007085 145.0
PJS3_k127_794455_3 MlaD protein K02067 - - 0.0000000000000000000001677 104.0
PJS3_k127_794455_4 Redoxin domain protein - - - 0.0000000000000000000006317 96.0
PJS3_k127_794455_5 EamA-like transporter family - - - 0.00000000000000000003726 101.0
PJS3_k127_797649_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768,K01769 - 4.6.1.1,4.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 399.0
PJS3_k127_797649_1 COG2346, Truncated hemoglobins K03406,K06886 GO:0001505,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008941,GO:0009056,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016491,GO:0016705,GO:0016708,GO:0017144,GO:0019825,GO:0020012,GO:0020037,GO:0030682,GO:0034641,GO:0036094,GO:0042133,GO:0042135,GO:0042221,GO:0042737,GO:0043207,GO:0044237,GO:0044248,GO:0044270,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046209,GO:0046210,GO:0046906,GO:0048037,GO:0050896,GO:0051213,GO:0051410,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0065007,GO:0065008,GO:0072593,GO:0075136,GO:0097159,GO:0098754,GO:1901363,GO:1901698,GO:2001057 - 0.000000000000000000000000000000000000000001736 159.0
PJS3_k127_797649_2 Major facilitator - - - 0.000000000000000000000000000000000003628 139.0
PJS3_k127_797649_3 Domain of unknown function (DUF4863) - - - 0.000000000000000000000000000000002206 136.0
PJS3_k127_801096_0 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009932 584.0
PJS3_k127_801096_1 ABC transporter substrate-binding protein PnrA-like K02058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 472.0
PJS3_k127_801096_2 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 423.0
PJS3_k127_801096_3 Guanine deaminase K01487 GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006144,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008892,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0016814,GO:0018756,GO:0019239,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0046098,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072521,GO:1901360,GO:1901564 3.5.4.3 0.00000000000000000000000001315 111.0
PJS3_k127_811910_0 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K14981 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 365.0
PJS3_k127_811910_1 Pyridoxamine 5'-phosphate oxidase K07226 - - 0.0000000000000000000000000000000000000000000000000000000000000000001842 237.0
PJS3_k127_811910_2 protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000000000000000004645 218.0
PJS3_k127_811910_3 Stimulus-sensing domain K14980 - 2.7.13.3 0.00000000000000000000000000000000000000001318 163.0
PJS3_k127_822189_0 DNA helicase K03657 - 3.6.4.12 4.236e-214 674.0
PJS3_k127_822189_1 Chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 556.0
PJS3_k127_822189_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000001924 192.0
PJS3_k127_822189_3 diguanylate cyclase K07216,K13590 - 2.7.7.65 0.00000000000000000000000000000000001096 138.0
PJS3_k127_850419_0 EamA-like transporter family K11939 GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015195,GO:0015238,GO:0015318,GO:0015562,GO:0015565,GO:0015711,GO:0015804,GO:0015807,GO:0015826,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0034220,GO:0034639,GO:0042221,GO:0042493,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 400.0
PJS3_k127_850419_1 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005198 362.0
PJS3_k127_850419_2 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00992 - 2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008019 270.0
PJS3_k127_850419_3 helix_turn_helix ASNC type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008098 239.0
PJS3_k127_850419_4 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000000009207 171.0
PJS3_k127_850419_5 Domain of unknown function (DUF4399) - - - 0.0000000000000000000000000000000000000002443 150.0
PJS3_k127_850419_6 Histidine kinase K07646 - 2.7.13.3 0.0008007 44.0
PJS3_k127_882731_0 3-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 332.0
PJS3_k127_882731_1 protein conserved in bacteria K09778 - - 0.000000000000000000000000000000000000000000000000000000002479 212.0
PJS3_k127_882731_2 ABC-type multidrug transport system, ATPase and permease K06147,K11085 - - 0.000000000000000000000000000000000000000000000000003312 184.0
PJS3_k127_887193_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.298e-247 775.0
PJS3_k127_887193_1 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.0000000000000000000000000000000000000000000000000000000001459 206.0
PJS3_k127_901863_0 YgbB family K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 416.0
PJS3_k127_901863_1 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 389.0
PJS3_k127_901863_2 Dihydrouridine synthase (Dus) K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 351.0
PJS3_k127_901863_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 340.0
PJS3_k127_901863_4 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000001911 228.0
PJS3_k127_901863_5 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000000000002227 171.0
PJS3_k127_901863_6 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000002252 107.0
PJS3_k127_907565_0 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes K00164 - 1.2.4.2 2.28e-255 804.0
PJS3_k127_907565_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 501.0
PJS3_k127_907565_2 Isocitrate/isopropylmalate dehydrogenase K07246 - 1.1.1.83,1.1.1.93,4.1.1.73 0.0000000000000000000000000000000000000009999 151.0
PJS3_k127_918364_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 3.813e-202 640.0
PJS3_k127_918364_1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 446.0
PJS3_k127_965931_0 COG1062 Zn-dependent alcohol dehydrogenases, class III K00153 - 1.1.1.306 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007654 438.0
PJS3_k127_965931_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008136 399.0
PJS3_k127_983234_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 612.0
PJS3_k127_983234_1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 585.0
PJS3_k127_983234_2 3-hydroxyacyl-coa dehydrogenase K07516 - 1.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009601 498.0