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Overview

ID MAG03120
Name PJS3_bin.71
Sample SMP0072
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Pseudomonadales
Family Alcanivoracaceae
Genus JARGPN01
Species
Assembly information
Completeness (%) 81.89
Contamination (%) 4.43
GC content (%) 53.0
N50 (bp) 8,677
Genome size (bp) 2,640,476

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2462

Gene name Description KEGG GOs EC E-value Score Sequence
PJS3_k127_1006350_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 2.927e-228 719.0
PJS3_k127_1006350_1 Domain of unknown function (DUF4105) - - - 2.002e-220 700.0
PJS3_k127_1006350_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000003831 84.0
PJS3_k127_1006350_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 437.0
PJS3_k127_1006350_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 346.0
PJS3_k127_1006350_4 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 345.0
PJS3_k127_1006350_5 protein conserved in bacteria K03690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004196 272.0
PJS3_k127_1006350_6 - - - - 0.00000000000000000000000000000000000000000000000000008927 191.0
PJS3_k127_1006350_7 Phosphoribosyl-ATP K01523 - 3.6.1.31 0.000000000000000000000000000000000000000001011 159.0
PJS3_k127_1006350_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000000000000000000007581 109.0
PJS3_k127_1006350_9 Protein of unknown function (DUF3015) - - - 0.0000000000000000001326 89.0
PJS3_k127_1009776_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 378.0
PJS3_k127_1009776_1 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009188 334.0
PJS3_k127_1009776_2 MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005943 282.0
PJS3_k127_1009776_3 protein conserved in bacteria K09928 - - 0.000000000000000000000000000000000000000000000000000000000000000000006799 237.0
PJS3_k127_1009776_4 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000000000000000000000001518 159.0
PJS3_k127_1018646_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1300.0
PJS3_k127_1018646_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000004057 258.0
PJS3_k127_1018646_2 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002987 249.0
PJS3_k127_1039018_0 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000009606 169.0
PJS3_k127_1115202_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 7.116e-312 959.0
PJS3_k127_1115202_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 2.743e-269 844.0
PJS3_k127_1115202_2 Belongs to the aldehyde dehydrogenase family K00128,K06447 - 1.2.1.3,1.2.1.71 3.81e-266 824.0
PJS3_k127_1115202_3 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 2.069e-219 681.0
PJS3_k127_1115202_4 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000001901 210.0
PJS3_k127_1115202_5 - - - - 0.00000000000000000000000002898 114.0
PJS3_k127_1116238_0 Belongs to the GMC oxidoreductase family - - - 4.116e-264 821.0
PJS3_k127_1116238_1 Protein of unknown function (DUF3047) - - - 0.0000000000000000000000000000000000000000000000000000004331 200.0
PJS3_k127_1116238_2 Pkd domain containing protein - - - 0.00000000000000000000000000000003469 131.0
PJS3_k127_1127484_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1184.0
PJS3_k127_1127484_1 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000005666 158.0
PJS3_k127_1145526_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003909,GO:0003911,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0034645,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050662,GO:0050896,GO:0051103,GO:0051287,GO:0051716,GO:0070403,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1901576 6.5.1.2 2.818e-258 814.0
PJS3_k127_1145526_1 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002492 268.0
PJS3_k127_1145526_2 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001319 273.0
PJS3_k127_114692_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 477.0
PJS3_k127_114692_1 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 465.0
PJS3_k127_114692_10 membrane - - - 0.00000000000000000000000000002708 120.0
PJS3_k127_114692_11 BPTI/Kunitz family of serine protease inhibitors. - - - 0.0000000000000000000001643 100.0
PJS3_k127_114692_2 molybdopterin K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 373.0
PJS3_k127_114692_3 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 327.0
PJS3_k127_114692_4 hydrolase K20862 - 3.1.3.102,3.1.3.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008586 278.0
PJS3_k127_114692_5 May be involved in the biosynthesis of molybdopterin K03638 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0042802,GO:0044424,GO:0044444,GO:0044464 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000001884 251.0
PJS3_k127_114692_6 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000002912 222.0
PJS3_k127_114692_7 Uncharacterized protein conserved in bacteria (DUF2057) K09909 - - 0.0000000000000000000000000000000000000000000000000000006471 200.0
PJS3_k127_114692_8 Protein of unknown function (DUF523) - - - 0.00000000000000000000000000000000000000000008223 168.0
PJS3_k127_114692_9 protein conserved in bacteria - - - 0.0000000000000000000000000000000007559 134.0
PJS3_k127_1161160_0 phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 371.0
PJS3_k127_1161160_1 Protein of unknown function (DUF3034) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004534 277.0
PJS3_k127_1161160_2 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000002713 155.0
PJS3_k127_1171767_0 MAPEG family - - - 0.000000000000000000000000000000000000000000000000006893 184.0
PJS3_k127_1171767_1 - - - - 0.000000000000000004437 84.0
PJS3_k127_1184179_0 transporter K12942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 600.0
PJS3_k127_1184179_1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006538 486.0
PJS3_k127_1184179_2 (ABC) transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 465.0
PJS3_k127_1184179_3 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 409.0
PJS3_k127_1184179_4 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000913 391.0
PJS3_k127_1184179_5 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 362.0
PJS3_k127_1184179_6 Histidine phosphatase superfamily (branch 1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 302.0
PJS3_k127_1184179_7 COG1305 Transglutaminase-like enzymes K22452 - 2.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000001534 241.0
PJS3_k127_1223202_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1253.0
PJS3_k127_1223202_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 1.22e-211 662.0
PJS3_k127_1223202_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 599.0
PJS3_k127_1223202_3 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002305 263.0
PJS3_k127_1223202_4 alcohol dehydrogenase K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000001507 228.0
PJS3_k127_1223202_5 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000000000000000000001682 214.0
PJS3_k127_1223202_6 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.0000000000000000000000000665 110.0
PJS3_k127_1223202_7 Modulates RecA activity K03565 - - 0.0000000000000000000001261 106.0
PJS3_k127_1223202_8 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000206 97.0
PJS3_k127_1223202_9 Recombinase zinc beta ribbon domain - - - 0.00001369 49.0
PJS3_k127_1265997_0 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 502.0
PJS3_k127_1265997_1 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000001743 168.0
PJS3_k127_1265997_2 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.000000000000000005159 84.0
PJS3_k127_1265997_3 Bacterial regulatory proteins, tetR family K09017 - - 0.000000000008137 74.0
PJS3_k127_1267183_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 447.0
PJS3_k127_1267183_1 pseudouridine methyltransferase K16317 - 2.1.1.257 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007376 302.0
PJS3_k127_1281691_0 acyl-CoA dehydrogenase - - - 0.0 1036.0
PJS3_k127_1281691_1 acyl-CoA dehydrogenase - - - 1.369e-293 912.0
PJS3_k127_1281691_2 flavoprotein involved in K transport - - - 3.162e-221 697.0
PJS3_k127_1281691_3 protein conserved in bacteria K09781 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851 391.0
PJS3_k127_1281691_4 PFAM helix-turn-helix- domain containing protein, AraC type - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 305.0
PJS3_k127_1281691_5 Phospholipase K01058 - 3.1.1.32,3.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000009093 250.0
PJS3_k127_1281691_6 endonuclease I K01150 - 3.1.21.1 0.00000000000000000000000000000000000000000000000000000000003573 211.0
PJS3_k127_1281691_7 esterase lipase K14731 - 3.1.1.83 0.00000000000000000000000000000000000000000000000000002546 195.0
PJS3_k127_1281691_8 transcriptional regulator - - - 0.0000000000000000000000000000000000000001634 158.0
PJS3_k127_1281691_9 Trm112p-like protein K09791 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000001844 94.0
PJS3_k127_1286175_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 1.703e-263 825.0
PJS3_k127_1286175_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 8.123e-217 680.0
PJS3_k127_1286175_10 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000000002117 179.0
PJS3_k127_1286175_11 serine threonine protein kinase - - - 0.00000000000000000000525 105.0
PJS3_k127_1286175_2 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 3.533e-214 671.0
PJS3_k127_1286175_3 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 539.0
PJS3_k127_1286175_4 Lytic murein transglycosylase B K08305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 400.0
PJS3_k127_1286175_5 COG3315 O-Methyltransferase involved in polyketide biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 349.0
PJS3_k127_1286175_6 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001072 250.0
PJS3_k127_1286175_7 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000000155 250.0
PJS3_k127_1286175_8 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000000000000000001038 224.0
PJS3_k127_1286175_9 DNA polymerase III K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000003193 211.0
PJS3_k127_1294437_0 secretion pathway protein K02453 - - 4.498e-279 872.0
PJS3_k127_1294437_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004856 252.0
PJS3_k127_1294437_2 Type II secretion system protein C K02452 - - 0.00000000000000000000000000000000000000000000000000000000000000000002406 242.0
PJS3_k127_1294437_3 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000004457 218.0
PJS3_k127_1294437_4 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000003082 164.0
PJS3_k127_1294437_5 Type II secretion system (T2SS), protein N K02463 - - 0.000000000000000000000000000000000000345 149.0
PJS3_k127_1298097_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0 1096.0
PJS3_k127_1298097_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003533 263.0
PJS3_k127_1298097_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006293 243.0
PJS3_k127_1298097_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000549 60.0
PJS3_k127_1308077_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1258.0
PJS3_k127_1308077_1 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 448.0
PJS3_k127_1308077_2 Catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate K14267 - 2.6.1.17 0.0000000000000000001061 90.0
PJS3_k127_1310434_1 Acyltransferase family - - - 0.00000000001662 76.0
PJS3_k127_1315541_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 544.0
PJS3_k127_1315541_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 391.0
PJS3_k127_1319615_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008792 565.0
PJS3_k127_1319615_1 Ribosomal protein L17 K02879 - - 0.0000000000000000000000000000000000000000000000000000003685 196.0
PJS3_k127_1321203_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1377.0
PJS3_k127_1321203_1 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 5.152e-274 852.0
PJS3_k127_1321203_10 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000000000002775 93.0
PJS3_k127_1321203_2 type II secretion system protein K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 582.0
PJS3_k127_1321203_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006793 564.0
PJS3_k127_1321203_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 521.0
PJS3_k127_1321203_5 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009089 384.0
PJS3_k127_1321203_6 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009577 378.0
PJS3_k127_1321203_7 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 323.0
PJS3_k127_1321203_8 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000001663 274.0
PJS3_k127_1321203_9 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000000000000000000000006689 229.0
PJS3_k127_1321638_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1205.0
PJS3_k127_1321638_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 427.0
PJS3_k127_1321638_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000000000000000002361 194.0
PJS3_k127_1321638_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000004313 126.0
PJS3_k127_1324282_0 Ankyrin repeat and sterile alpha motif K21413 - - 0.00000000000000000000000000000000000000000000000000007029 197.0
PJS3_k127_1324282_1 NAD-dependent histone deacetylase activity (H3-K18 specific) K02890,K12478,K21954 GO:0003674,GO:0005488,GO:0005543,GO:0008289,GO:0035091,GO:0043167,GO:0043168,GO:1901981 - 0.0000000000000000000000000000000002722 143.0
PJS3_k127_1333924_0 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001066 274.0
PJS3_k127_1333924_1 COG2863 Cytochrome c553 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003034 252.0
PJS3_k127_1333924_2 COG3245 Cytochrome c5 - - - 0.000000000000000000000239 96.0
PJS3_k127_1335461_0 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 329.0
PJS3_k127_1335461_1 Uracil DNA glycosylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000006406 213.0
PJS3_k127_1335461_2 Domain of unknown function (DUF4189) - - - 0.000000000000000000002016 103.0
PJS3_k127_1352059_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 2.325e-279 866.0
PJS3_k127_1352059_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000003758 160.0
PJS3_k127_137604_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 0.0 1165.0
PJS3_k127_137604_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 530.0
PJS3_k127_137604_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006866 427.0
PJS3_k127_137604_3 Belongs to the BI1 family K19416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 300.0
PJS3_k127_137604_4 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019222,GO:0019439,GO:0034353,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000007535 216.0
PJS3_k127_137604_5 phosphoserine phosphatase - - - 0.000000000000000000000003274 105.0
PJS3_k127_1386250_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0 1732.0
PJS3_k127_1386250_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 2.633e-226 707.0
PJS3_k127_1386250_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 601.0
PJS3_k127_1386250_3 kinase activity K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 490.0
PJS3_k127_1386250_4 mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 377.0
PJS3_k127_1386250_5 Salt-induced outer membrane protein K07283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003793 266.0
PJS3_k127_1386250_6 Protein of unknown function (DUF1461) - - - 0.000000000000000000000000000000000000000000000000000000004947 205.0
PJS3_k127_1386250_7 COG3288 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.00000000000000000000000000000000000003361 147.0
PJS3_k127_1395301_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000576 502.0
PJS3_k127_1395301_1 Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01886 - 6.1.1.18 0.000000000000000000000473 96.0
PJS3_k127_1395301_2 - - - - 0.00006318 45.0
PJS3_k127_1418881_0 Bacterial Ig-like domain - - - 2.413e-234 761.0
PJS3_k127_1418881_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 4.389e-223 698.0
PJS3_k127_1418881_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009602 562.0
PJS3_k127_1418881_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 541.0
PJS3_k127_1418881_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 GO:0001505,GO:0003674,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0017144,GO:0019464,GO:0019752,GO:0031405,GO:0031406,GO:0033293,GO:0036094,GO:0042133,GO:0042135,GO:0042737,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0065007,GO:0065008,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901681 - 0.0000000000000000000000000000000000000000000000000000002207 196.0
PJS3_k127_1418881_5 COG2067 Long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000001931 145.0
PJS3_k127_1435229_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 8.254e-209 653.0
PJS3_k127_1435229_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134,K03472 - 1.2.1.12,1.2.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 485.0
PJS3_k127_1435229_2 Belongs to the phosphoglycerate kinase family K00927 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005209 295.0
PJS3_k127_1437333_0 found to be peripherally associated with the inner membrane in Escherichia coli K03499 - - 3.557e-254 788.0
PJS3_k127_1437333_1 Trk system potassium uptake protein K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 436.0
PJS3_k127_1437333_2 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000002672 218.0
PJS3_k127_1437706_0 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000004619 185.0
PJS3_k127_1437706_1 COG1960 Acyl-CoA dehydrogenases - - - 0.000000000000000000000000000000000001753 139.0
PJS3_k127_1442803_0 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004271 295.0
PJS3_k127_1442803_1 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008254 290.0
PJS3_k127_1442803_2 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000000000000000001774 185.0
PJS3_k127_1452968_0 in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor K14260 - 2.6.1.2,2.6.1.66 3.933e-227 707.0
PJS3_k127_1452968_1 3-methyladenine DNA glycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 325.0
PJS3_k127_1452968_2 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000005371 227.0
PJS3_k127_1452968_3 Belongs to the methyltransferase superfamily K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000001148 199.0
PJS3_k127_1452968_4 - - - - 0.0000000000000000000000000000000000000000000001457 173.0
PJS3_k127_1455825_0 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 416.0
PJS3_k127_1455825_1 Capsule assembly protein Wzi - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006799 413.0
PJS3_k127_1455825_2 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 294.0
PJS3_k127_1455825_3 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.00000000000000000000000000000000000000000000000000000000002287 208.0
PJS3_k127_1455825_4 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.0000000000000000000000000000000000000000000000003327 179.0
PJS3_k127_1455825_5 Competence protein ComEA K02237 - - 0.000000000000003558 78.0
PJS3_k127_1478688_0 Chemotaxis protein histidine kinase and related K02487,K06596 - - 0.0 2379.0
PJS3_k127_1478688_1 chemotaxis protein K02660 - - 8.554e-316 979.0
PJS3_k127_1478688_10 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006879 247.0
PJS3_k127_1478688_11 response regulator K02657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005424 241.0
PJS3_k127_1478688_12 Chemotaxis signal transduction protein K02659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004169 241.0
PJS3_k127_1478688_13 COG0784 FOG CheY-like receiver K02658 - - 0.000000000000000000000000000000000000000000000000000000000000000006519 226.0
PJS3_k127_1478688_14 uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000002647 212.0
PJS3_k127_1478688_15 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000000004575 144.0
PJS3_k127_1478688_2 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 544.0
PJS3_k127_1478688_3 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 529.0
PJS3_k127_1478688_4 Dihydroorotase multifunctional complex type K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 486.0
PJS3_k127_1478688_5 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K06597 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 439.0
PJS3_k127_1478688_6 COG1352 Methylase of chemotaxis methyl-accepting proteins K00575,K02661 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 421.0
PJS3_k127_1478688_7 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 326.0
PJS3_k127_1478688_8 Zn-dependent hydrolases of the beta-lactamase fold K13985 - 3.1.4.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000006191 261.0
PJS3_k127_1478688_9 CheW-like domain K06598 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002085 254.0
PJS3_k127_1488204_0 Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed K00632 - 2.3.1.16 1.143e-220 688.0
PJS3_k127_14992_0 DNA polymerase K02337 - 2.7.7.7 0.0 1759.0
PJS3_k127_14992_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 546.0
PJS3_k127_14992_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 458.0
PJS3_k127_14992_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 295.0
PJS3_k127_14992_4 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 282.0
PJS3_k127_14992_5 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009922 289.0
PJS3_k127_14992_6 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000003382 61.0
PJS3_k127_1503009_0 transcriptional regulator, lysr family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 532.0
PJS3_k127_1503009_1 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 304.0
PJS3_k127_1512811_0 Bacterial Ig-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004731 610.0
PJS3_k127_1512811_1 COG2067 Long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 531.0
PJS3_k127_1512811_2 hydroxylase K18800 - - 0.000000000000000000000000000000000000000000001264 169.0
PJS3_k127_1512811_3 Multidrug resistance efflux pump - - - 0.000000001038 60.0
PJS3_k127_1530995_0 Protein of unknown function (DUF1298) K00635 - 2.3.1.20 3.692e-238 742.0
PJS3_k127_1530995_1 COG1960 Acyl-CoA dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009422 486.0
PJS3_k127_1530995_2 Histidine kinase K20972 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 424.0
PJS3_k127_1530995_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004221 344.0
PJS3_k127_1538075_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006852 445.0
PJS3_k127_1538075_1 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000001769 247.0
PJS3_k127_1542121_0 COG1960 Acyl-CoA dehydrogenases K06445 - - 0.000000000000000000000000000000000000000000005364 167.0
PJS3_k127_1544999_0 May be involved in recombinational repair of damaged DNA K03631 - - 9.076e-229 720.0
PJS3_k127_1544999_1 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 2.699e-198 627.0
PJS3_k127_1544999_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001792 279.0
PJS3_k127_1544999_3 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004202 252.0
PJS3_k127_1544999_4 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000003553 221.0
PJS3_k127_1544999_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00000000000000000000000000000000000000000000001032 176.0
PJS3_k127_1544999_6 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000000000000000000001635 123.0
PJS3_k127_1547202_0 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002671 268.0
PJS3_k127_1547202_1 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000005016 173.0
PJS3_k127_1610423_0 Belongs to the agmatine deiminase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007076 399.0
PJS3_k127_1610423_1 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000005646 245.0
PJS3_k127_1615303_0 mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth K15738 - - 8.497e-281 875.0
PJS3_k127_1615303_1 COG3264 Small-conductance mechanosensitive channel K05802 - - 2.795e-244 794.0
PJS3_k127_1615303_2 COG3000 Sterol desaturase K00227 - 1.14.19.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000691 610.0
PJS3_k127_1615303_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 610.0
PJS3_k127_1615303_4 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 486.0
PJS3_k127_1615303_5 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 347.0
PJS3_k127_1615303_6 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000006778 227.0
PJS3_k127_1615303_7 SMART HNH nuclease - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000175 193.0
PJS3_k127_1615303_8 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000006924 93.0
PJS3_k127_1626458_0 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015098,GO:0015103,GO:0015318,GO:0015399,GO:0015405,GO:0015412,GO:0015689,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0099133 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000014 278.0
PJS3_k127_1626458_1 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.00000000000000000001407 92.0
PJS3_k127_1649503_0 signal sequence binding - - - 0.00000000000000000000000000000000000000000000000000065 190.0
PJS3_k127_1649503_1 protein required for cytochrome oxidase assembly K02259 - - 0.000000000000000000000000000000000000003223 147.0
PJS3_k127_1649503_2 SURF1-like protein K14998 - - 0.000000000000002272 77.0
PJS3_k127_1653631_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 382.0
PJS3_k127_1653631_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.000000000000000000000000000000000001357 140.0
PJS3_k127_1653631_2 Tellurite resistance protein TerB - - - 0.00002466 51.0
PJS3_k127_168351_0 Protein of unknown function (DUF3703) - - - 0.0000000000000000000000000009925 116.0
PJS3_k127_168351_1 Phosphate-starvation-inducible E - - - 0.00000000000000000000001549 100.0
PJS3_k127_168351_2 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.00000000000000000000001576 100.0
PJS3_k127_1685245_0 TonB dependent receptor K16090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 582.0
PJS3_k127_1688127_0 Histidine Phosphotransfer domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003683 328.0
PJS3_k127_1688127_1 membrane protein domain - - - 0.00000000000000006007 81.0
PJS3_k127_1688127_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000004652 61.0
PJS3_k127_168871_0 Alpha beta hydrolase - - - 1.872e-289 896.0
PJS3_k127_168871_1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - - - 2.705e-210 658.0
PJS3_k127_168871_2 protein conserved in bacteria K07192 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 2.611e-208 661.0
PJS3_k127_168871_3 fatty acid desaturase K00508 - 1.14.19.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001 283.0
PJS3_k127_168871_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000092 276.0
PJS3_k127_168871_5 Protein of unknown function (DUF1449) - - - 0.0000000000000000000000000000000000000000000000000000000000001972 218.0
PJS3_k127_168871_6 PspA IM30 family protein K03969 - - 0.000000000000000000000000000000000000000000000000000000003301 206.0
PJS3_k127_168871_7 Predicted metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000002411 145.0
PJS3_k127_168871_8 - - - - 0.0000000000005988 76.0
PJS3_k127_1707687_0 MATE efflux family protein K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 613.0
PJS3_k127_1707687_1 COG0811 Biopolymer transport proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005808 323.0
PJS3_k127_1707687_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009117 290.0
PJS3_k127_1707687_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003064 266.0
PJS3_k127_1707687_4 COG0848 Biopolymer transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000473 209.0
PJS3_k127_1707687_5 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000000000000000000000000000000005717 188.0
PJS3_k127_1707687_6 protein conserved in bacteria K09906 - - 0.00000000000000000000000000000000000000000002981 168.0
PJS3_k127_1713565_0 exporters of the RND superfamily K07003 - - 0.0 1020.0
PJS3_k127_1713565_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 3.75e-291 900.0
PJS3_k127_1713565_10 Cob(II)yrinic acid a,c-diamide reductase K04719 - 1.13.11.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007048 272.0
PJS3_k127_1713565_11 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000000000000000005039 256.0
PJS3_k127_1713565_12 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000009125 251.0
PJS3_k127_1713565_14 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.00000000000000000000000000000004647 128.0
PJS3_k127_1713565_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 6.935e-244 757.0
PJS3_k127_1713565_3 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 481.0
PJS3_k127_1713565_4 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008333 402.0
PJS3_k127_1713565_5 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 379.0
PJS3_k127_1713565_6 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 341.0
PJS3_k127_1713565_7 membrane K08974 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 332.0
PJS3_k127_1713565_8 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006139,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008254,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009129,GO:0009131,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009173,GO:0009175,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030145,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042578,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046049,GO:0046050,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 288.0
PJS3_k127_1713565_9 COG0739 Membrane proteins related to metalloendopeptidases K06194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000342 289.0
PJS3_k127_17252_0 FAD linked oxidase - - - 2.285e-249 775.0
PJS3_k127_17252_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 2.284e-216 676.0
PJS3_k127_17252_10 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009797 256.0
PJS3_k127_17252_11 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000005503 190.0
PJS3_k127_17252_12 Protein of unknown function (DUF1425) - - - 0.0000000000000000000000000000000000000000000139 166.0
PJS3_k127_17252_13 - - - - 0.0000000000000000000000000004301 124.0
PJS3_k127_17252_2 COG0191 Fructose tagatose bisphosphate aldolase K01624 - 4.1.2.13 6.066e-208 649.0
PJS3_k127_17252_3 COG2267 Lysophospholipase K01048 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004174 439.0
PJS3_k127_17252_4 protein conserved in bacteria K09859 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 447.0
PJS3_k127_17252_5 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 342.0
PJS3_k127_17252_6 COG3417 Collagen-binding surface adhesin SpaP (antigen I II family) K07337 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 335.0
PJS3_k127_17252_7 Curli production assembly/transport component CsgG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 303.0
PJS3_k127_17252_8 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002624 273.0
PJS3_k127_17252_9 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004344 256.0
PJS3_k127_1734689_0 COG3385 FOG Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 445.0
PJS3_k127_1740085_0 COG0436 Aspartate tyrosine aromatic aminotransferase K12252,K14261 - 2.6.1.84 2.404e-206 644.0
PJS3_k127_1740085_1 recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 444.0
PJS3_k127_1740085_2 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000000000000009072 224.0
PJS3_k127_1740085_3 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000003347 218.0
PJS3_k127_1740085_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000000000000124 190.0
PJS3_k127_17561_0 Glycerol-3-phosphate dehydrogenase K00111,K21054 - 1.1.1.402,1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005778 572.0
PJS3_k127_17561_1 P-aminobenzoate N-oxygenase AurF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007923 464.0
PJS3_k127_17561_2 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 411.0
PJS3_k127_17561_3 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 373.0
PJS3_k127_17561_4 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007458 345.0
PJS3_k127_17561_5 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.0000000000000000000000000000000000000000000000000000000000000000001704 240.0
PJS3_k127_17561_6 Transcriptional - - - 0.0000000000000000000000000000000000000000006556 162.0
PJS3_k127_175672_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1190.0
PJS3_k127_175672_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0000000000000000000000002423 105.0
PJS3_k127_1763052_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1131.0
PJS3_k127_1763052_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0 1100.0
PJS3_k127_1763052_2 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 501.0
PJS3_k127_1763052_3 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 443.0
PJS3_k127_1763052_4 COG0578 Glycerol-3-phosphate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 406.0
PJS3_k127_1763052_5 COG1538 Outer membrane protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 410.0
PJS3_k127_1763052_6 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 307.0
PJS3_k127_1763052_7 esterase K07000 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 287.0
PJS3_k127_1763052_8 protein conserved in bacteria K09920 - - 0.0000000000000000000000000000000000000000000002392 171.0
PJS3_k127_1793334_0 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008582 369.0
PJS3_k127_1793334_1 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007934 325.0
PJS3_k127_1793334_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002193 233.0
PJS3_k127_1793334_3 Protein of unknown function (DUF1304) K08987 - - 0.0000000000000000000000000000000000000000000001447 170.0
PJS3_k127_1816582_0 dihydroorotase K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 601.0
PJS3_k127_1816582_1 chaperone-mediated protein folding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 484.0
PJS3_k127_1816582_2 COG0720 6-pyruvoyl-tetrahydropterin synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 444.0
PJS3_k127_1816582_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009888 364.0
PJS3_k127_1816582_4 diguanylate cyclase K11444 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000138 292.0
PJS3_k127_1816582_5 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000003354 229.0
PJS3_k127_1816582_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000005576 231.0
PJS3_k127_1816582_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000001711 221.0
PJS3_k127_1816582_8 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family K02503 - - 0.00000000000000000000000000000000000000000000000000000001077 198.0
PJS3_k127_1822474_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 588.0
PJS3_k127_1829785_0 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 5.411e-231 722.0
PJS3_k127_1829785_1 Ammonium transporter K03320 - - 2.341e-223 698.0
PJS3_k127_1829785_2 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005456 276.0
PJS3_k127_1829785_3 Zn-dependent hydrolases of the beta-lactamase fold K13985 - 3.1.4.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000167 267.0
PJS3_k127_1829785_4 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000002549 232.0
PJS3_k127_1829785_5 Belongs to the P(II) protein family K04752 - - 0.00000000000000000000000000000000000000000000000000001474 189.0
PJS3_k127_1829785_6 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000521 104.0
PJS3_k127_1851432_0 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000002882 263.0
PJS3_k127_1851432_1 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000000000000001927 212.0
PJS3_k127_1851432_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000002911 114.0
PJS3_k127_1865825_0 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 523.0
PJS3_k127_1865825_1 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 378.0
PJS3_k127_1865825_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006494 367.0
PJS3_k127_1865825_3 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 347.0
PJS3_k127_1865825_4 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 310.0
PJS3_k127_1865825_5 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000000000000000000000000000000000001975 203.0
PJS3_k127_1865825_6 Thioredoxin K03671 - - 0.00000000000000000000000000000000002355 137.0
PJS3_k127_1865825_7 Part of a membrane complex involved in electron transport K03615 - - 0.0000000000000002346 82.0
PJS3_k127_1867580_0 COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins K03466 GO:0000920,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006950,GO:0006970,GO:0007059,GO:0008094,GO:0008150,GO:0009628,GO:0009651,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0015616,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033676,GO:0042221,GO:0042623,GO:0042802,GO:0043085,GO:0043565,GO:0044093,GO:0044425,GO:0044459,GO:0044464,GO:0045893,GO:0045935,GO:0046677,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051301,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0070887,GO:0071236,GO:0071944,GO:0080090,GO:0097159,GO:0140097,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 6.164e-289 906.0
PJS3_k127_1867580_1 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 2.911e-206 650.0
PJS3_k127_1867580_2 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 547.0
PJS3_k127_1867580_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000000000000000000000000000000000000000000000002223 239.0
PJS3_k127_1867580_4 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000000000000001576 147.0
PJS3_k127_1867580_5 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000007988 139.0
PJS3_k127_188053_0 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 343.0
PJS3_k127_188053_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000001679 117.0
PJS3_k127_1916315_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000765 561.0
PJS3_k127_1916315_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 496.0
PJS3_k127_1916315_2 GGDEF domain - - - 0.00000000000000000000000000000000000000002758 157.0
PJS3_k127_1916315_3 Cupin - - - 0.00000000000000000000000000000272 129.0
PJS3_k127_1918713_0 Concanavalin A-like lectin/glucanases superfamily - - - 8.491e-245 776.0
PJS3_k127_1918713_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 479.0
PJS3_k127_195827_0 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 372.0
PJS3_k127_195827_1 Glycosyltransferase like family 2 K00786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006584 340.0
PJS3_k127_195827_2 - - - - 0.0000000000000000000000000393 123.0
PJS3_k127_195827_3 Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core K02848 - - 0.00000000000000000002364 91.0
PJS3_k127_1965145_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000001162 179.0
PJS3_k127_1965145_1 enoyl-CoA hydratase - - - 0.0000000000000000000000000000000000000000000002689 174.0
PJS3_k127_1970341_0 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 4.192e-195 612.0
PJS3_k127_1970341_1 Esterase lipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052 461.0
PJS3_k127_1970341_2 COG1226 Kef-type K transport systems K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007331 379.0
PJS3_k127_1970341_3 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 301.0
PJS3_k127_1979897_0 due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm K01869 - 6.1.1.4 0.0 1358.0
PJS3_k127_1979897_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 509.0
PJS3_k127_1979897_2 DUF218 domain - - - 0.0000000000000000000000000000000000000000000000000003238 191.0
PJS3_k127_1979897_3 DNA polymerase III K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000193 180.0
PJS3_k127_1979897_4 competence protein - - - 0.00000000000000000000000000000000000000000006229 178.0
PJS3_k127_1979897_5 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000004707 162.0
PJS3_k127_1979897_6 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.0000000000000000000000000007611 119.0
PJS3_k127_1979897_7 Rhomboid family - - - 0.0000000000000001943 91.0
PJS3_k127_1991485_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 1.938e-222 695.0
PJS3_k127_1991485_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 2.717e-210 660.0
PJS3_k127_1991485_10 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.000000000000000000000003094 108.0
PJS3_k127_1991485_2 Belongs to the peptidase S1C family K04691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 503.0
PJS3_k127_1991485_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006448 498.0
PJS3_k127_1991485_4 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 474.0
PJS3_k127_1991485_5 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 340.0
PJS3_k127_1991485_6 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000000000001257 228.0
PJS3_k127_1991485_7 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.00000000000000000000000000000000000000000000000000000000000009432 223.0
PJS3_k127_1991485_8 metal-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000005659 207.0
PJS3_k127_1991485_9 Belongs to the BolA IbaG family - - - 0.000000000000000000000000000007997 121.0
PJS3_k127_2004499_0 serine threonine protein kinase K12132 - 2.7.11.1 5.624e-278 880.0
PJS3_k127_2004499_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000000005538 222.0
PJS3_k127_2004499_2 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000006483 177.0
PJS3_k127_2040241_0 Zinc iron ABC transporter permease K07238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 300.0
PJS3_k127_2040241_1 DNA polymerase X family K02347 - - 0.00000000000000000307 85.0
PJS3_k127_2077390_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1529.0
PJS3_k127_2077390_1 Histidine kinase K07639 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 575.0
PJS3_k127_2077390_2 consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07661 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007059 377.0
PJS3_k127_2077390_3 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.00000002969 55.0
PJS3_k127_207931_0 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 442.0
PJS3_k127_207931_1 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 378.0
PJS3_k127_207931_2 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006543 289.0
PJS3_k127_207931_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000001444 173.0
PJS3_k127_207931_4 COG2104 Sulfur transfer protein involved in thiamine biosynthesis K03154 - - 0.000000000000000000004099 93.0
PJS3_k127_2083423_0 RHS Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005788 351.0
PJS3_k127_2083423_1 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001134 274.0
PJS3_k127_2083423_2 Lysine methyltransferase - - - 0.00000000000000000000000000000000000000000000000000001008 198.0
PJS3_k127_2122417_0 D-amino acid K03153 - 1.4.3.19 0.000000000000000000000000000000000001444 147.0
PJS3_k127_2122417_1 Tfp pilus assembly protein PilE K02655 - - 0.000000000000000000001826 98.0
PJS3_k127_2122417_2 pilus assembly protein FimT K08084 - - 0.00000000000000000002059 98.0
PJS3_k127_2127037_0 exporters of the RND superfamily K07003 - - 0.0 1021.0
PJS3_k127_2127037_1 Histidine kinase K20973 - 2.7.13.3 1.149e-237 756.0
PJS3_k127_2127037_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 491.0
PJS3_k127_2127037_3 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006338 262.0
PJS3_k127_2127037_4 Nucleoside-diphosphate-sugar epimerases - - - 0.00000000000000000000000000000000000000000000000000000394 198.0
PJS3_k127_2127037_5 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000005108 183.0
PJS3_k127_2134754_0 Short chain dehydrogenase - - - 1.227e-206 658.0
PJS3_k127_2134754_1 Metallopeptidase family M24 - - - 0.0000000000000000000000000005689 124.0
PJS3_k127_2149059_0 Ammonium Transporter K03320 - - 5.295e-214 670.0
PJS3_k127_2149059_1 at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA) K04752 - - 0.000000000000000000000000000000000000000000000000000000000000005766 216.0
PJS3_k127_2149059_2 protein conserved in bacteria K09806 - - 0.000000000000000000000000001051 115.0
PJS3_k127_2149059_3 protein localization to T-tubule K10380,K15503,K21440 - - 0.00000001358 68.0
PJS3_k127_215579_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 GO:0003674,GO:0003824,GO:0004617,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008219,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0012501,GO:0016053,GO:0016491,GO:0016597,GO:0016614,GO:0016616,GO:0019752,GO:0031406,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0047545,GO:0055114,GO:0070905,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 589.0
PJS3_k127_215579_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001577 256.0
PJS3_k127_2181246_0 Belongs to the selenophosphate synthase 1 family. Class I subfamily K01008 - 2.7.9.3 2.988e-204 659.0
PJS3_k127_2181246_1 COG3639 ABC-type phosphate phosphonate transport system, permease component K02042 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 561.0
PJS3_k127_2181246_10 TonB C terminal K03832 - - 0.000000000000007835 85.0
PJS3_k127_2181246_2 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 485.0
PJS3_k127_2181246_3 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 390.0
PJS3_k127_2181246_4 PhzC PhzF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 299.0
PJS3_k127_2181246_5 ABC transporter, ATP-binding protein K02041 - 3.6.3.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000001547 263.0
PJS3_k127_2181246_6 transcriptional regulator K22105 - - 0.000000000000000000000000000000000000000000000000000000001165 208.0
PJS3_k127_2181246_7 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000001125 198.0
PJS3_k127_2181246_8 - - - - 0.0000000000000000000000000000000003542 134.0
PJS3_k127_2181246_9 - - - - 0.00000000000000000000001336 109.0
PJS3_k127_2188247_0 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 445.0
PJS3_k127_2188247_1 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 426.0
PJS3_k127_2206289_0 Alpha/beta hydrolase family K19707 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 294.0
PJS3_k127_2210045_0 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 GO:0003674,GO:0003824,GO:0004462,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016151,GO:0016829,GO:0016846,GO:0019243,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042182,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046872,GO:0046914,GO:0051186,GO:0051596,GO:0061727,GO:0071704,GO:1901564,GO:1901575,GO:1901615 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000001718 222.0
PJS3_k127_2210045_1 protein conserved in archaea - - - 0.0000000000000000000000000000000000000000000000001992 178.0
PJS3_k127_2210737_0 2-oxoglutarate dehydrogenase K00164 - 1.2.4.2 0.0 1644.0
PJS3_k127_2210737_1 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 2.679e-307 949.0
PJS3_k127_2210737_10 Alginate export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 487.0
PJS3_k127_2210737_11 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K22067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 485.0
PJS3_k127_2210737_12 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 466.0
PJS3_k127_2210737_13 SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556 K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 459.0
PJS3_k127_2210737_14 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K15578 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 454.0
PJS3_k127_2210737_15 nucleoside-diphosphate sugar epimerase K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 350.0
PJS3_k127_2210737_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 340.0
PJS3_k127_2210737_17 Domain of unknown function (DUF3391) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005636 334.0
PJS3_k127_2210737_18 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005069 290.0
PJS3_k127_2210737_19 Haloacid dehalogenase-like hydrolase K02566 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003612 263.0
PJS3_k127_2210737_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.063e-263 818.0
PJS3_k127_2210737_20 response regulator K07183 - - 0.000000000000000000000000000000000000000000000000000000000000000001165 235.0
PJS3_k127_2210737_21 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000002377 231.0
PJS3_k127_2210737_22 succinate dehydrogenase K00241 - - 0.0000000000000000000000000000000000000000000000001291 180.0
PJS3_k127_2210737_23 Membrane-anchoring subunit of succinate dehydrogenase (SDH) K00242 - - 0.0000000000000000000000000000000000000000000004953 169.0
PJS3_k127_2210737_24 phosphohistidine phosphatase K08296 - - 0.0000000000000000000000000000000000001016 147.0
PJS3_k127_2210737_3 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576 - - 1.229e-256 795.0
PJS3_k127_2210737_4 2-oxoglutarate dehydrogenase complex K00382 - 1.8.1.4 1.395e-254 790.0
PJS3_k127_2210737_5 BFD-like [2Fe-2S] binding domain K00362 - 1.7.1.15 3.149e-215 687.0
PJS3_k127_2210737_6 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 1.061e-206 647.0
PJS3_k127_2210737_7 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 596.0
PJS3_k127_2210737_8 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 534.0
PJS3_k127_2210737_9 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 488.0
PJS3_k127_2236244_0 Polysaccharide deacetylase K11931,K21478 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016787,GO:0016810,GO:0043170,GO:0043412,GO:0071704,GO:0098732 - 0.00000000000000000000000000000000000000000000000000000004664 202.0
PJS3_k127_2236244_1 HemY protein K08309,K11935,K20543 - - 0.0000000000000000000000000000000000000000000002319 182.0
PJS3_k127_2252097_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0 1019.0
PJS3_k127_2252097_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 575.0
PJS3_k127_2252097_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000000000000000000000000197 198.0
PJS3_k127_2252097_3 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000000000005969 166.0
PJS3_k127_2259457_0 MMPL family K07003 - - 7.304e-217 700.0
PJS3_k127_2259457_1 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 350.0
PJS3_k127_2259457_2 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000001006 167.0
PJS3_k127_2275478_0 COG4206 Outer membrane cobalamin receptor protein K16092 - - 2.341e-270 844.0
PJS3_k127_2275478_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006476 515.0
PJS3_k127_2275478_2 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 416.0
PJS3_k127_2275478_3 COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 414.0
PJS3_k127_2275478_4 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003397 300.0
PJS3_k127_2275478_5 COG0079 Histidinol-phosphate aromatic aminotransferase and cobyric acid decarboxylase K00817,K02225 - 2.6.1.9 0.0000000000000004758 79.0
PJS3_k127_2291255_0 phosphoserine phosphatase - - - 0.000000000000000000000000000000000000000000000000001944 186.0
PJS3_k127_2291255_1 Iron-regulated protein - - - 0.00000000000000000000001119 113.0
PJS3_k127_2291255_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000003065 100.0
PJS3_k127_2296980_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134,K03472 - 1.2.1.12,1.2.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 432.0
PJS3_k127_2296980_1 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000003371 263.0
PJS3_k127_2296980_2 - - - - 0.00000000000000000000000000000000000000000000000000000000002138 211.0
PJS3_k127_2296980_3 COG1454 Alcohol dehydrogenase, class IV K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000009022 183.0
PJS3_k127_2296980_4 Ion channel - - - 0.000000000000000000000001001 109.0
PJS3_k127_2296980_5 Bacterioferritin-associated ferredoxin K02192 - - 0.000000000000000000007624 93.0
PJS3_k127_2320127_0 Phage Terminase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003053 502.0
PJS3_k127_2320127_1 Domain of unknown function (DUF3440) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008473 310.0
PJS3_k127_2320127_10 methyltransferase activity - - - 0.000000000000002061 85.0
PJS3_k127_2320127_11 - - - - 0.000000000000003461 85.0
PJS3_k127_2320127_12 - - - - 0.00000003202 62.0
PJS3_k127_2320127_13 Methyltransferase domain - - - 0.00000009424 62.0
PJS3_k127_2320127_2 Phage capsid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009414 252.0
PJS3_k127_2320127_3 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000001967 205.0
PJS3_k127_2320127_4 Phage portal protein - - - 0.00000000000000000000000000000000000000000000000000000001977 213.0
PJS3_k127_2320127_5 chromosome segregation K03497 - - 0.0000000000000000000000000000000000000000000003501 171.0
PJS3_k127_2320127_6 Phage prohead protease, HK97 family K06904 - - 0.000000000000000000000000000000000001171 147.0
PJS3_k127_2320127_7 Belongs to the N(4) N(6)-methyltransferase family - - - 0.00000000000000000000000000008641 123.0
PJS3_k127_2320127_8 Phage head-tail joining protein - - - 0.000000000000000000336 91.0
PJS3_k127_2320127_9 Phage terminase, small subunit - - - 0.0000000000000004143 83.0
PJS3_k127_2348036_0 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 - 2.3.3.9 0.0 1127.0
PJS3_k127_2348036_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 1.504e-225 707.0
PJS3_k127_2348036_2 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 497.0
PJS3_k127_2348036_3 Transcription factor K18850 - 1.14.11.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 423.0
PJS3_k127_2348036_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000922 360.0
PJS3_k127_2348036_5 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000003232 183.0
PJS3_k127_2348036_6 acetyltransferase - - - 0.00000000000000000000000000000000000000000001294 167.0
PJS3_k127_2348036_8 protein acetylation - - - 0.000000000000008553 80.0
PJS3_k127_2348036_9 High frequency lysogenization protein HflD homolog K07153 - - 0.000000000008746 65.0
PJS3_k127_2350195_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005632 503.0
PJS3_k127_2371046_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 383.0
PJS3_k127_2375237_0 COG3210 Large exoproteins involved in heme utilization or adhesion K15125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 546.0
PJS3_k127_2390817_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007392 601.0
PJS3_k127_2390817_1 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000000000000000000000000002415 184.0
PJS3_k127_2394590_0 Sulfate permease and related transporters (MFS superfamily) K03321 - - 7.428e-251 782.0
PJS3_k127_2394590_1 protein conserved in bacteria K09989 - - 1.654e-216 676.0
PJS3_k127_2394590_10 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 400.0
PJS3_k127_2394590_11 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 374.0
PJS3_k127_2394590_12 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005565 335.0
PJS3_k127_2394590_13 metal-dependent phosphoesterases (PHP family) K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 332.0
PJS3_k127_2394590_14 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 325.0
PJS3_k127_2394590_15 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006399 304.0
PJS3_k127_2394590_16 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008813 300.0
PJS3_k127_2394590_17 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 303.0
PJS3_k127_2394590_18 Prolyl oligopeptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002337 278.0
PJS3_k127_2394590_19 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000000000000000000000000000000000007802 236.0
PJS3_k127_2394590_2 Helix-turn-helix domain of transposase family ISL3 K07485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 589.0
PJS3_k127_2394590_20 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000005506 231.0
PJS3_k127_2394590_21 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000000000000000000000000000004773 214.0
PJS3_k127_2394590_22 Bacterial SH3 domain K07184 - - 0.000000000000000000000000000000000000000000000000000000007434 207.0
PJS3_k127_2394590_23 COG2755 Lysophospholipase L1 and related esterases K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.00000000000000000000000000000000000000000000000000000001981 205.0
PJS3_k127_2394590_24 YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the K09780 - - 0.000000000000000000000000000000000000000009305 155.0
PJS3_k127_2394590_25 - - - - 0.00000000000000000000000000000001582 139.0
PJS3_k127_2394590_3 carnitine dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 563.0
PJS3_k127_2394590_4 ATPase, AAA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 505.0
PJS3_k127_2394590_5 Domain of Unknown Function (DUF349) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006619 517.0
PJS3_k127_2394590_6 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004807 434.0
PJS3_k127_2394590_7 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 433.0
PJS3_k127_2394590_8 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008709 419.0
PJS3_k127_2394590_9 Acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 404.0
PJS3_k127_240664_0 unusual protein kinase - - - 2.349e-233 728.0
PJS3_k127_240664_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 3.341e-205 650.0
PJS3_k127_240664_2 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008958 284.0
PJS3_k127_2408320_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 607.0
PJS3_k127_2408320_1 Peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 505.0
PJS3_k127_2408320_2 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 392.0
PJS3_k127_2408320_3 transmembrane signaling receptor activity - - - 0.0000000000000000000000000000000000000000000000007698 185.0
PJS3_k127_2430796_0 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007784 407.0
PJS3_k127_2430796_1 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006308 250.0
PJS3_k127_2434914_0 Amidohydrolase family - - - 3.277e-252 790.0
PJS3_k127_2434914_1 Protein of unknown function (DUF2505) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009438 280.0
PJS3_k127_2434914_2 - - - - 0.00000000000000000000000000000000000000000000001419 177.0
PJS3_k127_2434914_3 Toxin-antitoxin system, toxin component, Fic family - - - 0.00000000000000000000000000000000000000234 151.0
PJS3_k127_2434914_4 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000007541 129.0
PJS3_k127_2434914_5 Virulence protein RhuM family - - - 0.000000000000000000002883 95.0
PJS3_k127_2464089_0 Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation K00322 - 1.6.1.1 7.276e-220 689.0
PJS3_k127_2464089_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 1.672e-194 617.0
PJS3_k127_2464089_10 Pilus assembly protein PilZ - - - 0.000001749 55.0
PJS3_k127_2464089_2 ( 3 oxidation state) methyltransferase K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 488.0
PJS3_k127_2464089_3 Fe-S oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 462.0
PJS3_k127_2464089_4 START domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002823 248.0
PJS3_k127_2464089_5 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000002079 209.0
PJS3_k127_2464089_6 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.0000000000000000000000000000000000000000000000000000001642 203.0
PJS3_k127_2464089_7 protein conserved in bacteria K09931 - - 0.000000000000000000000000000000008466 137.0
PJS3_k127_2464089_9 (Hpt) domain K20976 - - 0.00000000000000001258 86.0
PJS3_k127_2466719_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 1.635e-319 994.0
PJS3_k127_2470826_0 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 542.0
PJS3_k127_2470826_1 Histidine kinase K20972 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 437.0
PJS3_k127_2470826_2 Acyl dehydratase - - - 0.00000000000000000004218 91.0
PJS3_k127_248038_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 3.871e-276 857.0
PJS3_k127_248038_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 541.0
PJS3_k127_248038_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 GO:0000166,GO:0001510,GO:0001882,GO:0001883,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006457,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009268,GO:0009451,GO:0009628,GO:0009636,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0030488,GO:0030955,GO:0031420,GO:0032259,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0061077,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000002618 103.0
PJS3_k127_248038_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000003532 55.0
PJS3_k127_24875_0 Metal binding domain of Ada - - - 0.0000000000000000000000000000000000000000003418 158.0
PJS3_k127_2496370_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1351.0
PJS3_k127_2496370_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000965 557.0
PJS3_k127_2496370_2 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 553.0
PJS3_k127_2506746_0 dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes - - - 0.0 1052.0
PJS3_k127_2506746_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 616.0
PJS3_k127_2506746_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009652 316.0
PJS3_k127_2506746_3 transcriptional regulator K22105 - - 0.0000000000000000000000000000000000000000000000000000005998 201.0
PJS3_k127_2506746_4 - - - - 0.00000000000000000000000000000000001341 148.0
PJS3_k127_2522347_0 Protein of unknown function (DUF1302) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 350.0
PJS3_k127_2522347_1 aminopeptidase N K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000004782 233.0
PJS3_k127_2529996_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 1.794e-229 715.0
PJS3_k127_2529996_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 390.0
PJS3_k127_2529996_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 376.0
PJS3_k127_2529996_3 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006667 374.0
PJS3_k127_2529996_4 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 361.0
PJS3_k127_2529996_5 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000003084 223.0
PJS3_k127_2535395_0 Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair K03580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 599.0
PJS3_k127_2537977_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 513.0
PJS3_k127_2537977_1 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 351.0
PJS3_k127_2537977_2 Forms part of the polypeptide exit tunnel K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005912 331.0
PJS3_k127_2537977_3 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000000000000000000000000000002334 189.0
PJS3_k127_2537977_4 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000000000002111 173.0
PJS3_k127_2537977_5 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000001031 141.0
PJS3_k127_2537977_6 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000001288 143.0
PJS3_k127_2537977_7 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000003236 69.0
PJS3_k127_2565987_0 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 389.0
PJS3_k127_2565987_1 transporter component K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000483 222.0
PJS3_k127_2565987_2 Transporter Component K07112 - - 0.000000000000000000000000000000000000003789 147.0
PJS3_k127_2565987_3 helix_turn_helix, Arsenical Resistance Operon Repressor - GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000003208 124.0
PJS3_k127_25674_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 GO:0000041,GO:0003674,GO:0005215,GO:0005375,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0006873,GO:0006875,GO:0006878,GO:0006950,GO:0008150,GO:0008324,GO:0009636,GO:0009987,GO:0010035,GO:0010038,GO:0010272,GO:0010273,GO:0015075,GO:0015080,GO:0015318,GO:0015673,GO:0015679,GO:0016020,GO:0016021,GO:0019725,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0031224,GO:0034220,GO:0035434,GO:0042221,GO:0042592,GO:0043167,GO:0043169,GO:0044425,GO:0044464,GO:0046688,GO:0046872,GO:0046873,GO:0046914,GO:0046915,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0055065,GO:0055070,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0060003,GO:0061687,GO:0065007,GO:0065008,GO:0071944,GO:0097501,GO:0098655,GO:0098660,GO:0098662,GO:0098754,GO:0098771,GO:1902601,GO:1990169 - 3.132e-235 734.0
PJS3_k127_25674_1 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000009394 200.0
PJS3_k127_2587786_0 COG0625 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009012 273.0
PJS3_k127_25925_0 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components K06147 - - 2.936e-194 610.0
PJS3_k127_2602808_0 Belongs to the GPI family K01810 - 5.3.1.9 2.121e-205 653.0
PJS3_k127_2602808_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005322 480.0
PJS3_k127_2602808_2 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 351.0
PJS3_k127_2602808_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001154 262.0
PJS3_k127_2602808_4 Glycosyl transferase family 4 K13007 - - 0.00000000000000000008151 90.0
PJS3_k127_2602808_5 Polysaccharide biosynthesis protein K17716 - 5.1.3.2 0.0000003215 55.0
PJS3_k127_2616837_0 Protein of unknown function (DUF2804) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 460.0
PJS3_k127_2616837_1 chlorophyll binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 351.0
PJS3_k127_2616837_2 - - - - 0.0000000000000000000000000000000000000000000000000000000009133 208.0
PJS3_k127_2616837_3 Belongs to the small heat shock protein (HSP20) family K04080 - - 0.0000000000000000000000000000000000000000000000000000005099 196.0
PJS3_k127_2616837_4 2OG-Fe(II) oxygenase superfamily K07394 - - 0.00000000000000000000000000000000000000000000000003254 186.0
PJS3_k127_2616837_5 Transcriptional K10917 - - 0.000000000000000000000000000000000000000000166 165.0
PJS3_k127_2616837_6 protein conserved in bacteria K09977 - - 0.00000000000000000000000000000000000004693 153.0
PJS3_k127_2616837_7 Protein of unknown function (DUF1524) - - - 0.0000000000000000000000002754 113.0
PJS3_k127_2618969_0 COG2303 Choline dehydrogenase and related flavoproteins K03333 - 1.1.3.6 8.869e-241 752.0
PJS3_k127_2618969_1 GGDEF domain K21019 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 377.0
PJS3_k127_2618969_2 permease K11744 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0009372,GO:0009987,GO:0015562,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0044764,GO:0051179,GO:0051234,GO:0051704,GO:0055085,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 333.0
PJS3_k127_2618969_3 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000806 263.0
PJS3_k127_2618969_4 Belongs to the UPF0149 family K07039 - - 0.00000000000000000000000000000000000000000000000000000001634 203.0
PJS3_k127_2618969_5 Membrane - - - 0.000000000000000000000000000000000000000000000005968 179.0
PJS3_k127_2618969_6 Protein of unknown function (DUF2914) - - - 0.00000000000000001101 94.0
PJS3_k127_2669462_0 Peptidase M60-like family K21429 - - 0.0 1030.0
PJS3_k127_2669462_1 COG0514 Superfamily II DNA helicase K03654 - 3.6.4.12 1.013e-274 857.0
PJS3_k127_2669462_2 acyl-CoA dehydrogenase K09456 - - 8.3e-268 833.0
PJS3_k127_2669462_3 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 434.0
PJS3_k127_2669462_4 COG1192 ATPases involved in chromosome partitioning - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 386.0
PJS3_k127_2669462_5 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005972 383.0
PJS3_k127_2669462_6 Domain of unknown function (DUF4062) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 361.0
PJS3_k127_2669462_7 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000001614 257.0
PJS3_k127_2669462_8 COG1309 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000007326 208.0
PJS3_k127_2683577_0 Domain of unknown function (DUF3520) K07114 - - 4.13e-203 654.0
PJS3_k127_2683577_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000001681 220.0
PJS3_k127_2687056_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 6.472e-242 751.0
PJS3_k127_2687056_1 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006647 527.0
PJS3_k127_2687056_2 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 409.0
PJS3_k127_2687056_3 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007542 325.0
PJS3_k127_2687056_4 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 289.0
PJS3_k127_2687056_5 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000004554 182.0
PJS3_k127_2687056_6 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000002468 57.0
PJS3_k127_269363_0 COG3210 Large exoproteins involved in heme utilization or adhesion K15125 - - 1.592e-239 754.0
PJS3_k127_270412_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 - 3.1.11.5 5.551e-205 680.0
PJS3_k127_270412_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 GO:0000166,GO:0000724,GO:0000725,GO:0003674,GO:0003824,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008854,GO:0009338,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043142,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000006833 277.0
PJS3_k127_270412_2 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 0.000000000002921 77.0
PJS3_k127_272417_0 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 3.384e-224 700.0
PJS3_k127_272417_1 TonB-dependent Receptor Plug K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 573.0
PJS3_k127_272417_10 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000001635 111.0
PJS3_k127_272417_11 Late embryogenesis abundant protein - - - 0.0000000000000000000001271 104.0
PJS3_k127_272417_2 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 374.0
PJS3_k127_272417_3 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000515 361.0
PJS3_k127_272417_4 unusual protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001065 283.0
PJS3_k127_272417_5 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000003908 211.0
PJS3_k127_272417_6 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000000000304 183.0
PJS3_k127_272417_7 Belongs to the UPF0225 family K09858 - - 0.00000000000000000000000000000000000000000004372 165.0
PJS3_k127_272417_8 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000009081 152.0
PJS3_k127_272417_9 - - - - 0.00000000000000000000000000000000005818 147.0
PJS3_k127_2729465_0 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 - - 2.729e-197 625.0
PJS3_k127_2729465_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008147 529.0
PJS3_k127_2729465_2 COG0642 Signal transduction histidine kinase K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 467.0
PJS3_k127_2729465_3 FAD dependent oxidoreductase K03153 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0036094,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043436,GO:0043799,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0072527,GO:0072528,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.4.3.19 0.000000000000000000000000000000000000000000000000000000000000000000009141 248.0
PJS3_k127_2729465_5 Prokaryotic N-terminal methylation motif K08084,K08085 - - 0.000009668 53.0
PJS3_k127_2758264_0 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 6.841e-199 629.0
PJS3_k127_2758264_1 SURF1-like protein K14998 - - 0.0000000000000000000000000000000000000000000000000289 187.0
PJS3_k127_2758264_2 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000003315 176.0
PJS3_k127_2761830_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008964,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.1.1.31 4.026e-298 942.0
PJS3_k127_2761830_1 COG0642 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 522.0
PJS3_k127_2761830_2 Cyclopropane fatty acid synthase and related K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 447.0
PJS3_k127_2761830_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 366.0
PJS3_k127_2761830_4 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 293.0
PJS3_k127_2761830_5 ketosteroid isomerase - - - 0.0000000000000000000000000000000000001818 149.0
PJS3_k127_2761830_6 Protein of unknown function (DUF2878) - - - 0.0000000000000000000000000004711 120.0
PJS3_k127_2761830_7 Fatty acid cis/trans isomerase (CTI) - - - 0.0000000000002309 71.0
PJS3_k127_2761830_8 GGDEF domain - - - 0.00000001875 61.0
PJS3_k127_2782637_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 1.503e-288 901.0
PJS3_k127_2782637_1 Part of a membrane complex involved in electron transport K03615 - - 7.793e-265 838.0
PJS3_k127_2782637_10 Part of a membrane complex involved in electron transport K03616 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005132 328.0
PJS3_k127_2782637_11 Glutathione S-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 293.0
PJS3_k127_2782637_12 of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 290.0
PJS3_k127_2782637_13 transcriptional Regulator, LysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000386 227.0
PJS3_k127_2782637_14 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.0000000000000000000000000000000000000000000000000000000104 205.0
PJS3_k127_2782637_15 transcriptional regulator - - - 0.000000000000000000000000000000000000000000203 165.0
PJS3_k127_2782637_16 Peptidase_C39 like family - - - 0.0000000000000000000000000000002149 125.0
PJS3_k127_2782637_17 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000000000000000000002904 111.0
PJS3_k127_2782637_18 Protein of unknown function (DUF3301) - - - 0.00000000000000000000000002141 112.0
PJS3_k127_2782637_19 Protein of unknown function (DUF2288) - - - 0.00000000000000000000007083 101.0
PJS3_k127_2782637_2 COG0642 Signal transduction histidine kinase - - - 1.878e-259 831.0
PJS3_k127_2782637_20 endonuclease containing a URI domain K07461 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.0000000000000000000003298 100.0
PJS3_k127_2782637_3 COG4775 Outer membrane protein protective antigen OMA87 - - - 4.888e-195 626.0
PJS3_k127_2782637_4 Aminotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 573.0
PJS3_k127_2782637_5 dioxygenase K11159 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005155 520.0
PJS3_k127_2782637_6 Esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 510.0
PJS3_k127_2782637_7 COG0642 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 523.0
PJS3_k127_2782637_8 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009832 342.0
PJS3_k127_2782637_9 Belongs to the GST superfamily K11209 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 337.0
PJS3_k127_2800011_0 LVIVD repeat - - - 0.0 1761.0
PJS3_k127_2800011_1 - - - - 4.144e-208 662.0
PJS3_k127_2800011_2 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 614.0
PJS3_k127_2800011_3 COG2303 Choline dehydrogenase and related flavoproteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 427.0
PJS3_k127_2800011_4 Cytochrome c3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 338.0
PJS3_k127_2800011_5 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 308.0
PJS3_k127_2800011_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001881 269.0
PJS3_k127_2800011_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000004875 221.0
PJS3_k127_2800011_8 Acyl-CoA-binding protein - - - 0.0000000000000000000000000000000001985 133.0
PJS3_k127_2800011_9 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K12136 - - 0.000000000000003123 76.0
PJS3_k127_2814062_0 Conserved Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 366.0
PJS3_k127_2814062_1 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 341.0
PJS3_k127_2850368_0 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007289 438.0
PJS3_k127_2850368_1 COG0530 Ca2 Na antiporter K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000001123 231.0
PJS3_k127_2850368_2 Sulfur carrier protein TusA K04085 - - 0.000000000000000000000000000001879 123.0
PJS3_k127_2865879_0 Diguanylate cyclase - - - 3.676e-195 656.0
PJS3_k127_2865879_1 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 449.0
PJS3_k127_2865879_2 membrane protein required for spore maturation in B.subtilis K06374 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 414.0
PJS3_k127_2865879_3 DNA repair protein - - - 0.0000000000000000000000000000000000000000000000000000007252 200.0
PJS3_k127_2865879_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000003323 160.0
PJS3_k127_28979_0 hydroxymethylglutaryl-CoA reductase K00021 - 1.1.1.34 0.0 1050.0
PJS3_k127_28979_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1044.0
PJS3_k127_28979_10 Negative regulator of sigma E activity K03598 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004195 278.0
PJS3_k127_28979_11 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004557 284.0
PJS3_k127_28979_12 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000007012 230.0
PJS3_k127_28979_13 phosphatidylcholine synthase activity K01004,K17103 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050520,GO:0071704,GO:0090407,GO:1901576 2.7.8.24,2.7.8.8 0.00000000000000000000000000000000000000000000000001484 187.0
PJS3_k127_28979_14 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.0000000000000000000000000000000000000000003254 166.0
PJS3_k127_28979_15 Pfam:DUF46 - - - 0.000000000000000000000000000000000000000001655 162.0
PJS3_k127_28979_16 Positive regulator of K03803 - - 0.0000000000000000000000000000002869 127.0
PJS3_k127_28979_2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007,K21787 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016999,GO:0017000,GO:0017144,GO:0044237,GO:0044249 2.7.9.2 2.57e-322 1011.0
PJS3_k127_28979_3 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.602e-278 864.0
PJS3_k127_28979_4 exporters of the RND superfamily K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004487 589.0
PJS3_k127_28979_5 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 540.0
PJS3_k127_28979_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 312.0
PJS3_k127_28979_7 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005388 320.0
PJS3_k127_28979_8 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 312.0
PJS3_k127_28979_9 PFAM AMP-dependent synthetase and ligase K22319 - 6.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 303.0
PJS3_k127_2900872_0 ABC transporter ATP-binding protein K06158 - - 5.284e-238 753.0
PJS3_k127_2900872_1 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 619.0
PJS3_k127_2900872_2 effector of murein hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 308.0
PJS3_k127_2900872_3 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006847 282.0
PJS3_k127_2900872_4 Peptidyl-prolyl cis-trans isomerase K03772,K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000001456 214.0
PJS3_k127_2900872_5 Belongs to the Rsd AlgQ family K07740 - - 0.0000000000000000000000000000000000000000000000423 176.0
PJS3_k127_2900872_6 Protein of unknown function (DUF2390) - - - 0.00000000000000000000000003401 113.0
PJS3_k127_2900872_8 Effector of murein hydrolase LrgA K05338,K06518 GO:0000270,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0006810,GO:0008104,GO:0008150,GO:0008152,GO:0008565,GO:0009056,GO:0009057,GO:0009253,GO:0015031,GO:0015833,GO:0016020,GO:0030203,GO:0033036,GO:0042886,GO:0043170,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000001106 76.0
PJS3_k127_29083_0 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 499.0
PJS3_k127_29083_1 COG0520 Selenocysteine lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 466.0
PJS3_k127_29083_2 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 361.0
PJS3_k127_29083_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 334.0
PJS3_k127_29083_4 protein conserved in bacteria K09986 - - 0.00000000000000000000000000000000000000000000000000000000729 205.0
PJS3_k127_291286_0 Predicted metal-dependent hydrolase K07044 - - 0.0000000000000000000000000000000000000000000637 162.0
PJS3_k127_291286_1 P-type ATPase K17686 - 3.6.3.54 0.000000000000000000000000004188 111.0
PJS3_k127_291286_2 protein conserved in bacteria - - - 0.0000000000000000000000000109 113.0
PJS3_k127_291286_3 Predicted metal-dependent hydrolase K07044 - - 0.0000000000429 66.0
PJS3_k127_2921133_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 1.058e-302 931.0
PJS3_k127_2921133_1 nucleotidase K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 347.0
PJS3_k127_2921133_2 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 344.0
PJS3_k127_2921133_3 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 319.0
PJS3_k127_2921133_4 hydrolase K20881 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 303.0
PJS3_k127_2921133_5 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K08312 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 289.0
PJS3_k127_2921133_6 Belongs to the HSP15 family K04762 GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009987,GO:0016070,GO:0033554,GO:0034605,GO:0034641,GO:0043021,GO:0043023,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000005126 150.0
PJS3_k127_2921133_7 TIR domain - - - 0.0000000000000000000000000000007981 124.0
PJS3_k127_2939723_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1185.0
PJS3_k127_2956613_0 Tetratricopeptide repeat - - - 1.671e-238 752.0
PJS3_k127_2956613_1 - - - - 0.00000000000000000000000000000000000000000000000000004753 192.0
PJS3_k127_2956613_2 Tetratricopeptide repeat - - - 0.0000000001112 64.0
PJS3_k127_2963128_0 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000001959 166.0
PJS3_k127_2963128_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000004303 140.0
PJS3_k127_29896_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00210,K00800 - 1.3.1.12,2.5.1.19 0.0 1088.0
PJS3_k127_29896_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009916 488.0
PJS3_k127_29896_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000001281 217.0
PJS3_k127_2995724_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1457.0
PJS3_k127_2995724_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 GO:0000715,GO:0000716,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008094,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019899,GO:0031323,GO:0031326,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0043175,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051276,GO:0051716,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0 1029.0
PJS3_k127_2995724_10 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000001776 234.0
PJS3_k127_2995724_11 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.000000000000000000000000000000000000000000000000000000000000001997 224.0
PJS3_k127_2995724_12 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000004201 221.0
PJS3_k127_2995724_13 Universal stress protein K06149 - - 0.0000000000000000000000000000000000000000000000000000001101 198.0
PJS3_k127_2995724_15 Peptidoglycan-binding protein, CsiV - - - 0.000000000000000000000000000000000000006142 156.0
PJS3_k127_2995724_16 - - - - 0.00000000000001984 83.0
PJS3_k127_2995724_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 546.0
PJS3_k127_2995724_3 flavoproteins K07007 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 527.0
PJS3_k127_2995724_4 mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 491.0
PJS3_k127_2995724_5 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 398.0
PJS3_k127_2995724_6 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 385.0
PJS3_k127_2995724_7 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K19696 - 2.4.2.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009932 336.0
PJS3_k127_2995724_8 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002654 276.0
PJS3_k127_2995724_9 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000001107 258.0
PJS3_k127_3015700_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 9.901e-239 746.0
PJS3_k127_3015700_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 2.102e-232 723.0
PJS3_k127_3015700_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 3.332e-198 622.0
PJS3_k127_3015700_3 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004247 553.0
PJS3_k127_3015700_4 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 512.0
PJS3_k127_3015700_5 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 445.0
PJS3_k127_3015700_6 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 417.0
PJS3_k127_3015700_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 404.0
PJS3_k127_3015700_8 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006822 400.0
PJS3_k127_3015700_9 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 292.0
PJS3_k127_3024642_0 Fatty acid cis/trans isomerase (CTI) - - - 5.214e-272 854.0
PJS3_k127_3024642_1 D-alanine [D-alanyl carrier protein] ligase activity - - - 0.00001158 48.0
PJS3_k127_3029193_0 - - - - 7.63e-303 944.0
PJS3_k127_3029193_2 - - - - 3.293e-250 777.0
PJS3_k127_3029193_3 X-Pro dipeptidyl-peptidase (S15 family) - - - 9.492e-200 638.0
PJS3_k127_3029193_4 COG0659 Sulfate permease and related transporters (MFS superfamily) K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 567.0
PJS3_k127_3029193_5 carboxylic ester hydrolase activity K01054 - 3.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 423.0
PJS3_k127_3029193_6 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000988 253.0
PJS3_k127_3029193_8 transporter component K07112 - - 0.00000004551 55.0
PJS3_k127_3031253_0 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 1.833e-310 972.0
PJS3_k127_3065789_0 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 411.0
PJS3_k127_3065789_1 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000000000000000003742 231.0
PJS3_k127_3065789_2 START domain - - - 0.00000000000000000000000000000000000000000000000002298 189.0
PJS3_k127_3065789_3 Aminoglycoside phosphotransferase - - - 0.0000002778 52.0
PJS3_k127_3081869_0 ATPase, AAA K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 447.0
PJS3_k127_3081869_1 - - - - 0.000000000000000000000000000000000000000000000000000000000001428 226.0
PJS3_k127_3081869_2 Domain of unknown function (DUF4350) - - - 0.000000000000000000000000000000000000000000000000000002363 209.0
PJS3_k127_3081869_3 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000004345 61.0
PJS3_k127_3089898_0 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 385.0
PJS3_k127_3089898_1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008317 293.0
PJS3_k127_3089898_2 Belongs to the UPF0145 family - - - 0.000000000000000000000000000000000000000000006443 167.0
PJS3_k127_3089898_3 Belongs to the UPF0145 family - - - 0.00000000000000000000000000000000000000000007691 164.0
PJS3_k127_3089898_4 peptidase M48, Ste24p - - - 0.000000000000000000000000000000001226 138.0
PJS3_k127_3091448_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.93e-280 880.0
PJS3_k127_3091448_1 Arginyl-tRNA synthetase K01887 - 6.1.1.19 6.198e-264 824.0
PJS3_k127_3091448_2 Malate dehydrogenase K00027,K00029 - 1.1.1.38,1.1.1.40 4.018e-219 684.0
PJS3_k127_3091448_3 cell division protein - - - 0.0000000000000000000000000000000000000000000000000000000001679 210.0
PJS3_k127_3091448_4 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000001465 124.0
PJS3_k127_3099657_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005547 567.0
PJS3_k127_3102487_0 transcriptional regulator K03556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 297.0
PJS3_k127_3124441_0 acyl-CoA dehydrogenase - - - 1.112e-197 632.0
PJS3_k127_3124441_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000006692 198.0
PJS3_k127_3124441_2 Protein of unknown function (DUF2505) - - - 0.000000000000000000000000000000000002466 143.0
PJS3_k127_3135210_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1177.0
PJS3_k127_3135210_1 LuxR family transcriptional regulator K04333,K20918 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 314.0
PJS3_k127_3135210_2 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001941 267.0
PJS3_k127_3139098_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 4.688e-264 824.0
PJS3_k127_3139098_1 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity K14540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 517.0
PJS3_k127_3139098_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009298 503.0
PJS3_k127_3139098_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 428.0
PJS3_k127_3139098_4 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000000000000000000000000007155 216.0
PJS3_k127_3139098_5 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000008757 102.0
PJS3_k127_3139098_6 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000002986 85.0
PJS3_k127_3139098_7 OmpA-like transmembrane domain - - - 0.0000001318 62.0
PJS3_k127_3160083_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1211.0
PJS3_k127_3160083_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 515.0
PJS3_k127_3160083_2 heptosyltransferase K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 478.0
PJS3_k127_3160083_3 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 366.0
PJS3_k127_3163180_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1603.0
PJS3_k127_3163180_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 1.657e-200 635.0
PJS3_k127_3163180_2 permease K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 493.0
PJS3_k127_3163180_3 Permease K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000859 441.0
PJS3_k127_3163180_4 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 352.0
PJS3_k127_3163180_5 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000001226 211.0
PJS3_k127_3163180_6 DNA polymerase III chi subunit K02339 - 2.7.7.7 0.0000000000000000000000000000000000003522 144.0
PJS3_k127_3163823_0 Acts as a magnesium transporter K06213 - - 9.363e-202 637.0
PJS3_k127_3163823_1 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008284 371.0
PJS3_k127_3163823_2 Protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000007572 224.0
PJS3_k127_3163823_3 PTS fructose transporter subunit IIA K02806 - - 0.000000000000000000000000000000000000000000000000000000000000001357 221.0
PJS3_k127_3163823_4 - - - - 0.00000000000000000000000000000009339 134.0
PJS3_k127_3163823_5 Phosphocarrier protein HPr K08485,K11189 - - 0.0000000000000000000000000001972 117.0
PJS3_k127_3166270_0 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517 422.0
PJS3_k127_3166270_1 May be involved in the folding of the extracellular lipase during its passage through the periplasm - - - 0.000000000000000000000000000000000000000000000000000000000000000001111 240.0
PJS3_k127_3166726_0 Histidine kinase K07678 - 2.7.13.3 1.395e-270 859.0
PJS3_k127_3166726_1 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 3.222e-201 634.0
PJS3_k127_3166726_2 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 505.0
PJS3_k127_3166726_3 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006786 453.0
PJS3_k127_3166726_4 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006729 377.0
PJS3_k127_3166726_5 Dynamin family K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009898,GO:0009987,GO:0016020,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0019843,GO:0019897,GO:0019898,GO:0022613,GO:0031234,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0036211,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044877,GO:0046777,GO:0070181,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 366.0
PJS3_k127_3166726_6 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000001371 240.0
PJS3_k127_3166726_7 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.00000000000000000000000000000000000000000000000000000000000000000002084 237.0
PJS3_k127_3166726_8 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008897,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0018070,GO:0018193,GO:0018209,GO:0018215,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 2.7.8.7 0.0000000000000000000002271 101.0
PJS3_k127_3170752_0 Regulatory protein LuxR - - - 0.000000000000000000000000000000000000000000000001519 189.0
PJS3_k127_3170752_1 Cytochrome oxidase maturation protein - - - 0.0000000004549 63.0
PJS3_k127_3172735_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006656 447.0
PJS3_k127_3172735_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005077 359.0
PJS3_k127_3172735_2 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000002773 235.0
PJS3_k127_3172735_3 Protein of unknown function (DUF541) K09807 - - 0.0000000000000000000000000000000000000006041 157.0
PJS3_k127_3203509_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009289 608.0
PJS3_k127_3203509_1 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 543.0
PJS3_k127_3203509_2 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 537.0
PJS3_k127_3203509_3 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 410.0
PJS3_k127_3203509_4 reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009839 369.0
PJS3_k127_3203509_5 unusual protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 344.0
PJS3_k127_3203509_6 haloacid dehalogenase-like hydrolase K22292 - 3.1.3.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 295.0
PJS3_k127_3208738_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 1.629e-237 740.0
PJS3_k127_3208738_1 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000262 124.0
PJS3_k127_3209471_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 452.0
PJS3_k127_3209471_1 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 424.0
PJS3_k127_3209471_10 Protein of unknown function (DUF805) - - - 0.0000000000000000000000000000000000008689 147.0
PJS3_k127_3209471_11 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000003389 106.0
PJS3_k127_3209471_2 Bacterial low temperature requirement A protein (LtrA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 425.0
PJS3_k127_3209471_3 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 392.0
PJS3_k127_3209471_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006587 379.0
PJS3_k127_3209471_5 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 367.0
PJS3_k127_3209471_6 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 357.0
PJS3_k127_3209471_7 NAD(P)H-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000001241 229.0
PJS3_k127_3209471_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.00000000000000000000000000000000000000000000000000000000000001897 216.0
PJS3_k127_3209471_9 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000001329 162.0
PJS3_k127_321134_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 2.346e-224 703.0
PJS3_k127_321134_1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 402.0
PJS3_k127_321134_2 Belongs to the UPF0149 family K09895 - - 0.00000000000000000000000000000000000000000000008766 175.0
PJS3_k127_321134_3 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000000000001316 117.0
PJS3_k127_321134_4 TIGRFAM TIGR02449 family protein K09892 - - 0.0000000000000000004283 88.0
PJS3_k127_3235306_0 Peroxiredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 428.0
PJS3_k127_3235306_1 membrane protein, hemolysin III homolog K11068 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000007694 239.0
PJS3_k127_3235306_2 COG0517 FOG CBS domain - - - 0.0000000000000000000000000000000000000000000000001766 180.0
PJS3_k127_3235306_3 PFAM Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000000000000117 171.0
PJS3_k127_3235306_4 secreted trypsin-like serine protease K01325 - 3.4.21.35 0.00000000000000000000000000000004603 144.0
PJS3_k127_3242543_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 372.0
PJS3_k127_3242543_1 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.0000000000000000000000000000000000000000371 161.0
PJS3_k127_3289937_0 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362 - 1.7.1.15 0.0 1357.0
PJS3_k127_3289937_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1022.0
PJS3_k127_3289937_2 RHS Repeat - - - 3.116e-265 919.0
PJS3_k127_3289937_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 458.0
PJS3_k127_3289937_4 Pyridine nucleotide-disulphide oxidoreductase K00362,K05297 - 1.18.1.1,1.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009497 421.0
PJS3_k127_3289937_5 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 384.0
PJS3_k127_3289937_6 metallopeptidase activity K01179,K20276 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000002939 289.0
PJS3_k127_3289937_7 Nitrate nitrite transporter K02575 - - 0.0000000000000000000000000000000000000000000000000000000000009803 214.0
PJS3_k127_3289937_8 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000005137 205.0
PJS3_k127_3289937_9 Nitrite reductase K00363 - 1.7.1.15 0.000000000000000000000000000000000000001646 149.0
PJS3_k127_3306785_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004422 450.0
PJS3_k127_3306785_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 316.0
PJS3_k127_3310739_0 SAM-dependent methyltransferases K06969 - 2.1.1.191 1.061e-253 784.0
PJS3_k127_3317399_0 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 289.0
PJS3_k127_3317399_1 MMPL family K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001735 291.0
PJS3_k127_3324096_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.129e-315 980.0
PJS3_k127_3362689_0 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K00974 - 2.7.7.72 3.195e-194 613.0
PJS3_k127_3362689_1 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001546 273.0
PJS3_k127_3362689_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K03793 - 1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000004444 256.0
PJS3_k127_3362689_3 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000002861 232.0
PJS3_k127_3362689_4 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000001714 97.0
PJS3_k127_3362689_5 Domain of unknown function (DUF4124) - - - 0.000006712 57.0
PJS3_k127_3391873_0 HNH nucleases - - - 0.000000000000000004201 88.0
PJS3_k127_3393053_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1005.0
PJS3_k127_3393053_1 Transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003771 380.0
PJS3_k127_3393053_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 282.0
PJS3_k127_3393053_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006047 271.0
PJS3_k127_3393053_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000000000000000000006141 232.0
PJS3_k127_3394393_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 380.0
PJS3_k127_3394393_1 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003225 256.0
PJS3_k127_3394393_2 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.000000000000000000000000001144 112.0
PJS3_k127_3403636_0 Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host K05801 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 340.0
PJS3_k127_3403636_1 of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000003637 229.0
PJS3_k127_3408595_0 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 340.0
PJS3_k127_3408595_1 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000006125 183.0
PJS3_k127_3408595_2 CorA-like Mg2+ transporter protein K03284 - - 0.0000000000000000000000000000000000000000000000003023 178.0
PJS3_k127_3448703_0 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003542 507.0
PJS3_k127_3448703_1 MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 326.0
PJS3_k127_3448703_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000002156 201.0
PJS3_k127_3448703_3 Biopolymer transport protein K03560 - - 0.0000000000000000000000000000000000000000000000000000001389 201.0
PJS3_k127_3448703_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000000000000000000000000000000001406 191.0
PJS3_k127_3448703_5 Thioesterase K01075,K07107 - 3.1.2.23 0.000000000000000000000000000000000000000000000000002374 187.0
PJS3_k127_3459381_0 COG4733 Phage-related protein, tail component K21449 - - 0.0000000000000000000000000000000000000000000000000002536 210.0
PJS3_k127_3459381_1 - - - - 0.000000000000000000000000000000000000000000000000006677 190.0
PJS3_k127_3459381_10 HNH endonuclease K07451 - - 0.0000000000005343 73.0
PJS3_k127_3459381_12 - - - - 0.00000269 55.0
PJS3_k127_3459381_13 Protein of unknown function (DUF4035) - - - 0.000003982 53.0
PJS3_k127_3459381_14 Protein of unknown function (DUF3168) - - - 0.000007234 53.0
PJS3_k127_3459381_15 Bacteriophage HK97-gp10, putative tail-component - - - 0.000009414 53.0
PJS3_k127_3459381_16 - - - - 0.00001303 55.0
PJS3_k127_3459381_17 HNH endonuclease - - - 0.0001251 53.0
PJS3_k127_3459381_18 tape measure - - - 0.0001467 55.0
PJS3_k127_3459381_2 Putative amidoligase enzyme - - - 0.00000000000000000000000000000000000000000004208 174.0
PJS3_k127_3459381_3 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000000000000000000001204 130.0
PJS3_k127_3459381_5 YqaJ-like viral recombinase domain - - - 0.0000000000000000000004637 106.0
PJS3_k127_3459381_6 Phage tail tape measure protein TP901 - - - 0.00000000000000000006618 105.0
PJS3_k127_3459381_8 - - - - 0.000000000000005283 81.0
PJS3_k127_3459381_9 - - - - 0.000000000000009542 82.0
PJS3_k127_3495456_0 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006497 346.0
PJS3_k127_3495456_1 metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000004277 164.0
PJS3_k127_3507720_0 Fatty acid desaturase K00496 GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016491,GO:0016705,GO:0016713,GO:0018685,GO:0043446,GO:0043448,GO:0044237,GO:0044248,GO:0055114,GO:0071704,GO:1901575 1.14.15.3 1.16e-201 632.0
PJS3_k127_3507720_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 409.0
PJS3_k127_3507720_2 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 292.0
PJS3_k127_3507720_3 Trk system potassium uptake protein K03498 - - 0.00000000000000000000000000000000000000001023 155.0
PJS3_k127_3513001_0 in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon K13634 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007137 576.0
PJS3_k127_3513001_1 5'-nucleotidase K01081 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 464.0
PJS3_k127_3513001_11 phosphoserine phosphatase K02203 - 2.7.1.39,3.1.3.3 0.000000000000000000000000000000005056 130.0
PJS3_k127_3513001_12 - - - - 0.00007327 51.0
PJS3_k127_3513001_2 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003584 415.0
PJS3_k127_3513001_3 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008335 421.0
PJS3_k127_3513001_4 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 342.0
PJS3_k127_3513001_5 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964,K22130 - 4.1.1.104,4.2.1.109 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 284.0
PJS3_k127_3513001_6 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000003261 268.0
PJS3_k127_3513001_7 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.00000000000000000000000000000000000000000000000000000000000000000000000006111 252.0
PJS3_k127_3513001_8 heparin binding K03646 - - 0.00000000000000000000000000000000000000000000000000000003199 202.0
PJS3_k127_3513001_9 - - - - 0.00000000000000000000000000000000000004754 147.0
PJS3_k127_3519406_0 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 516.0
PJS3_k127_3519406_1 aminoglycoside phosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 462.0
PJS3_k127_3519406_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 297.0
PJS3_k127_3572926_0 Acetyl-CoA hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000636 478.0
PJS3_k127_3572926_1 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.000000004335 58.0
PJS3_k127_3573272_0 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 3.5e-321 1001.0
PJS3_k127_3616413_0 protein conserved in bacteria K09929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003406 283.0
PJS3_k127_3616413_1 DoxX - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001551 259.0
PJS3_k127_3616413_2 (Lipo)protein K04754 - - 0.0000003872 55.0
PJS3_k127_3618334_0 Saccharopine dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009809 606.0
PJS3_k127_3618334_1 Belongs to the UPF0246 family K09861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 351.0
PJS3_k127_3618334_2 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 316.0
PJS3_k127_3618334_3 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000000000000000000000000000000000000002527 189.0
PJS3_k127_3622695_0 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000546 276.0
PJS3_k127_3622695_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000000000000000000000000000000000000000003632 179.0
PJS3_k127_3622695_2 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904 - 0.0000000000000000000000000000000000000000000006104 166.0
PJS3_k127_3622695_3 Ribosomal protein L30p/L7e K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000009493 118.0
PJS3_k127_3639743_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.275e-282 876.0
PJS3_k127_3639743_1 Protein of unknown function (DUF3592) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009253 434.0
PJS3_k127_3639743_2 membrane protein (homolog of Drosophila rhomboid) - - - 0.000000000000000000000000000000000000000000000000000000000000000000003264 240.0
PJS3_k127_3653046_0 Pseudomonas avirulence D protein (AvrD) - - - 0.0000000000000000000000000000000000000000000000915 181.0
PJS3_k127_3653046_1 Autoinducer binding domain - - - 0.000000000000005033 83.0
PJS3_k127_3667528_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 506.0
PJS3_k127_3667528_1 Protein of unknown function (DUF3592) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005366 269.0
PJS3_k127_3672420_0 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 1.983e-205 645.0
PJS3_k127_3672420_1 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 369.0
PJS3_k127_3672420_2 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003688 297.0
PJS3_k127_3672420_3 sterol desaturase - - - 0.000000000000000000000000000000000000000000000000001194 193.0
PJS3_k127_3672420_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0043167,GO:0043169,GO:0044237,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1 0.000000000000000000000000000006561 119.0
PJS3_k127_3672420_5 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000002665 64.0
PJS3_k127_370295_0 COG3156 Type II secretory pathway, component PulK K02460 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006287 317.0
PJS3_k127_370295_1 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 - - 0.00000000000000000000000000000000000000786 156.0
PJS3_k127_3709201_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 1.18e-242 754.0
PJS3_k127_3709201_1 COG0146 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 1.553e-232 730.0
PJS3_k127_3709201_10 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000000000000000003871 202.0
PJS3_k127_3709201_11 FMN_bind - - - 0.0000000000000000000000000000000000000000000000000002784 192.0
PJS3_k127_3709201_12 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000000000002436 182.0
PJS3_k127_3709201_2 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 1.535e-212 667.0
PJS3_k127_3709201_3 phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005676 589.0
PJS3_k127_3709201_4 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 526.0
PJS3_k127_3709201_5 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 - 2.1.3.3,2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 468.0
PJS3_k127_3709201_6 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 383.0
PJS3_k127_3709201_7 overlaps another CDS with the same product name K21019 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000823 346.0
PJS3_k127_3709201_8 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 334.0
PJS3_k127_3709201_9 overlaps another CDS with the same product name K21019 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 327.0
PJS3_k127_3734192_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 4.12e-284 885.0
PJS3_k127_3734192_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 3.927e-211 661.0
PJS3_k127_3734192_2 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005091 580.0
PJS3_k127_3734192_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 537.0
PJS3_k127_3734192_4 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 496.0
PJS3_k127_3734192_5 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 401.0
PJS3_k127_3734192_6 desaturase K00508 - 1.14.19.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004302 360.0
PJS3_k127_3734192_7 ATPase or kinase K06925 - - 0.00000000000000000000000000000000000000000000000001428 188.0
PJS3_k127_3734192_8 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000000006368 146.0
PJS3_k127_3734192_9 - - - - 0.0000000000000000000000003078 110.0
PJS3_k127_3739343_0 Heat shock 70 kDa protein K04043 - - 4.382e-310 961.0
PJS3_k127_3739343_1 Heat shock 70 kDa protein K04043 - - 4.382e-310 961.0
PJS3_k127_3739343_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008029 407.0
PJS3_k127_3739343_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008029 407.0
PJS3_k127_3739343_12 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001034 250.0
PJS3_k127_3739343_13 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001034 250.0
PJS3_k127_3739343_14 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000004647 221.0
PJS3_k127_3739343_15 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000004647 221.0
PJS3_k127_3739343_16 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000000000000000000000005822 223.0
PJS3_k127_3739343_17 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000000000000000000000005822 223.0
PJS3_k127_3739343_18 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.000000000000000000000000000000000000000000000000002549 186.0
PJS3_k127_3739343_19 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.000000000000000000000000000000000000000000000000002549 186.0
PJS3_k127_3739343_2 May be involved in recombinational repair of damaged DNA K03631 - - 2.249e-230 725.0
PJS3_k127_3739343_20 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000000000000000000001635 123.0
PJS3_k127_3739343_21 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000000000000000000001635 123.0
PJS3_k127_3739343_3 May be involved in recombinational repair of damaged DNA K03631 - - 2.249e-230 725.0
PJS3_k127_3739343_4 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 2.439e-197 624.0
PJS3_k127_3739343_5 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 2.439e-197 624.0
PJS3_k127_3739343_6 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008652 551.0
PJS3_k127_3739343_7 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008652 551.0
PJS3_k127_3739343_8 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 513.0
PJS3_k127_3739343_9 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 513.0
PJS3_k127_3742773_0 rRNA (Guanine-N1-)-methyltransferase K00563 - 2.1.1.187 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 443.0
PJS3_k127_3761743_0 protein conserved in bacteria K09941 - - 0.0000000000000000000000000000000000000000000000000000000000007382 217.0
PJS3_k127_3761743_1 protein conserved in bacteria - - - 0.00000000000000000000000000000000002077 142.0
PJS3_k127_3761743_2 surface antigen - - - 0.0000000000000000000005279 105.0
PJS3_k127_3762507_0 Fatty acid desaturase K00496 GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016491,GO:0016705,GO:0016713,GO:0018685,GO:0043446,GO:0043448,GO:0044237,GO:0044248,GO:0055114,GO:0071704,GO:1901575 1.14.15.3 4.72e-230 714.0
PJS3_k127_3762507_1 Cytochrome bd-type quinol oxidase, subunit 1 K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 518.0
PJS3_k127_3762507_2 PFAM ABC transporter K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 481.0
PJS3_k127_3762507_3 TIGRFAM cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 381.0
PJS3_k127_3762507_4 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000007578 233.0
PJS3_k127_3762507_5 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000004107 213.0
PJS3_k127_3762507_6 OmpA-like transmembrane domain - - - 0.000000000000000000000000000000000000000000000000000007493 194.0
PJS3_k127_3762507_7 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.000000000000000000000000000000000000000001119 158.0
PJS3_k127_3804222_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 286.0
PJS3_k127_3809241_0 Alpha-2-Macroglobulin K06894 - - 0.0 1436.0
PJS3_k127_3809241_1 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 396.0
PJS3_k127_3809241_2 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000000000000000000005343 224.0
PJS3_k127_3809241_3 An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH K00240,K09159 GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006105,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016043,GO:0016999,GO:0017013,GO:0017144,GO:0018065,GO:0018293,GO:0019538,GO:0019752,GO:0022607,GO:0034552,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0043648,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0045333,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072350,GO:1901564 1.3.5.1,1.3.5.4 0.000000000000000000003607 95.0
PJS3_k127_3809241_4 membrane protein (homolog of Drosophila rhomboid) - - - 0.000000005175 60.0
PJS3_k127_3816229_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 5.783e-206 656.0
PJS3_k127_3816229_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 300.0
PJS3_k127_3816229_2 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000009885 239.0
PJS3_k127_3816229_3 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000381 209.0
PJS3_k127_3816229_4 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000000000000003042 162.0
PJS3_k127_3818650_0 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008024 370.0
PJS3_k127_3818650_1 Belongs to the WrbA family K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009914 270.0
PJS3_k127_3818650_2 membrane protein domain - - - 0.00000000000000000000000000000000000000000000000000000000000000004581 231.0
PJS3_k127_3818650_3 arsenate reductase K00537 - 1.20.4.1 0.00000000000000000000000000000000000000000000009612 170.0
PJS3_k127_3818650_4 - - - - 0.00000000000000000000000000000006176 130.0
PJS3_k127_3818650_5 membrane - - - 0.00000000000000000000000002955 112.0
PJS3_k127_3889961_0 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 402.0
PJS3_k127_3889961_1 COG1024 Enoyl-CoA hydratase carnithine racemase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 389.0
PJS3_k127_3889961_2 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000001047 222.0
PJS3_k127_3889961_3 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.0000000000000000000000000000000000000000000000000000000001478 214.0
PJS3_k127_3889961_4 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000009998 100.0
PJS3_k127_3889961_5 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000001018 74.0
PJS3_k127_3889961_6 AraC family transcriptional regulator - - - 0.0000000001165 61.0
PJS3_k127_3929143_0 Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA K00219 - 1.3.1.34 1.436e-317 984.0
PJS3_k127_3929143_1 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 1.276e-221 692.0
PJS3_k127_3929143_10 Domain of unknown function (DUF4154) - - - 0.000000000000000000000001497 110.0
PJS3_k127_3929143_12 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000173 87.0
PJS3_k127_3929143_13 Membrane-bound lysozyme-inhibitor of c-type lysozyme - - - 0.0006388 50.0
PJS3_k127_3929143_2 MMPL family K07003 - - 4.701e-214 691.0
PJS3_k127_3929143_3 COG1960 Acyl-CoA dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 563.0
PJS3_k127_3929143_4 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 529.0
PJS3_k127_3929143_5 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007846 505.0
PJS3_k127_3929143_6 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000424 354.0
PJS3_k127_3929143_7 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005893 259.0
PJS3_k127_3929143_8 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002156 234.0
PJS3_k127_3929143_9 - - - - 0.00000000000000000000000000000000002833 144.0
PJS3_k127_3979017_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1067.0
PJS3_k127_3979017_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 601.0
PJS3_k127_3979017_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008996 456.0
PJS3_k127_3979017_3 Histidine kinase K10916 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 421.0
PJS3_k127_3979017_4 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 351.0
PJS3_k127_3979017_5 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000399 343.0
PJS3_k127_3979017_6 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001057 282.0
PJS3_k127_3979017_7 Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000375 262.0
PJS3_k127_3979017_8 Arc-like DNA binding domain - - - 0.0000000000001346 75.0
PJS3_k127_3984092_0 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 400.0
PJS3_k127_3984092_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006899 393.0
PJS3_k127_3984092_2 esterase lipase K14731 - 3.1.1.83 0.000000000000001671 80.0
PJS3_k127_399879_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 557.0
PJS3_k127_399879_1 COG3568 Metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 396.0
PJS3_k127_4018958_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 9.232e-254 788.0
PJS3_k127_4018958_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 591.0
PJS3_k127_4018958_2 Histidine kinase K07717,K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000003364 276.0
PJS3_k127_4018958_3 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 - - 0.00000000000000000000000000000000000000000000000000000000009749 209.0
PJS3_k127_4018958_4 protein, possibly involved in aromatic compounds catabolism - - - 0.0000000000000000000000000000000000000000000000000003322 189.0
PJS3_k127_406437_0 esterase of the alpha-beta hydrolase superfamily K07001 - - 1.711e-220 703.0
PJS3_k127_406437_1 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 501.0
PJS3_k127_406437_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 356.0
PJS3_k127_406437_3 endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 307.0
PJS3_k127_406437_4 D-alanine [D-alanyl carrier protein] ligase activity - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005005 289.0
PJS3_k127_406437_5 Sigma-70, region 4 - - - 0.0000000000000000000000000000000001958 137.0
PJS3_k127_4106261_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 3.479e-228 720.0
PJS3_k127_4106261_1 Multidrug transporter - - - 0.00000000000000000000000000000000000004853 146.0
PJS3_k127_4106261_2 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000008172 113.0
PJS3_k127_41094_0 Lipoprotein releasing system, transmembrane protein K09808 - - 1.231e-202 636.0
PJS3_k127_41094_1 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 GO:0008104,GO:0008150,GO:0033036,GO:0051179 - 0.0000000000000000000000000000000000000008306 153.0
PJS3_k127_4126234_0 PgaD-like protein K11937 - - 0.0000000000000000000000000007829 118.0
PJS3_k127_4133847_0 Belongs to the thiolase family K00626 - 2.3.1.9 2.84e-234 730.0
PJS3_k127_4133847_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000001185 140.0
PJS3_k127_4133847_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000009607 47.0
PJS3_k127_4181330_0 flavoprotein involved in K transport - - - 1.992e-206 656.0
PJS3_k127_4181330_1 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 566.0
PJS3_k127_4181330_10 Domain of unknown function (DUF4124) - - - 0.00000000000000000000000000000000000000006802 156.0
PJS3_k127_4181330_2 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 552.0
PJS3_k127_4181330_3 Metal-dependent hydrolase K07044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008774 443.0
PJS3_k127_4181330_4 esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 367.0
PJS3_k127_4181330_5 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 303.0
PJS3_k127_4181330_6 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007152 273.0
PJS3_k127_4181330_7 diguanylate cyclase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000005016 261.0
PJS3_k127_4181330_8 Receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000001172 218.0
PJS3_k127_4181330_9 START domain - - - 0.000000000000000000000000000000000000000000000000000298 196.0
PJS3_k127_4183372_0 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005627 494.0
PJS3_k127_4183372_1 fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000515 248.0
PJS3_k127_4183372_2 Uncharacterized lipoprotein K07286 - - 0.000000000000000000000000000000000000000000000000008436 186.0
PJS3_k127_4183372_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000000000002206 173.0
PJS3_k127_4183372_4 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000000000000006721 151.0
PJS3_k127_4183372_5 transcriptional regulator, TetR family - - - 0.0000007159 60.0
PJS3_k127_4185552_0 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 3.027e-233 741.0
PJS3_k127_4185552_1 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006877 345.0
PJS3_k127_4185552_2 Thioredoxin domain-containing protein K05838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 318.0
PJS3_k127_4185552_3 sterol carrier protein - - - 0.000000000000000000000000000000000000000000000000000000006982 201.0
PJS3_k127_4185552_4 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000000000000000000000000000254 194.0
PJS3_k127_4205734_0 Thrombospondin type 3 repeat - - - 3.404e-206 666.0
PJS3_k127_4205734_1 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00162,K00167 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 477.0
PJS3_k127_4205734_10 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000002562 97.0
PJS3_k127_4205734_11 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627,K09699 - 2.3.1.12,2.3.1.168 0.00000397 49.0
PJS3_k127_4205734_2 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627,K09699 - 2.3.1.12,2.3.1.168 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 471.0
PJS3_k127_4205734_3 COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit K00161,K00166 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008422 426.0
PJS3_k127_4205734_4 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 372.0
PJS3_k127_4205734_5 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00263 - 1.4.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000945 362.0
PJS3_k127_4205734_6 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 331.0
PJS3_k127_4205734_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004001 275.0
PJS3_k127_4205734_8 dienelactone hydrolase K21104 - 3.1.1.101 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000491 277.0
PJS3_k127_4205734_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000006068 230.0
PJS3_k127_4240983_0 methylmalonate-semialdehyde dehydrogenase K00140 - 1.2.1.18,1.2.1.27 8.689e-248 772.0
PJS3_k127_4240983_1 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007136 582.0
PJS3_k127_4240983_2 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 434.0
PJS3_k127_4240983_3 enoyl-CoA hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 422.0
PJS3_k127_4240983_4 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 333.0
PJS3_k127_4240983_5 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007508 280.0
PJS3_k127_4245359_0 Polysaccharide biosynthesis protein - - - 2.963e-208 661.0
PJS3_k127_4245359_1 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 478.0
PJS3_k127_4245359_2 Small-conductance mechanosensitive channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 386.0
PJS3_k127_429274_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1320.0
PJS3_k127_430015_0 Belongs to the UPF0260 family K09160 - - 0.000000000000000000000000000000000000000000000000000004117 195.0
PJS3_k127_430015_1 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000001547 185.0
PJS3_k127_430015_2 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.00000000000000000000000000000000000000000000000002545 183.0
PJS3_k127_430015_3 YcgL domain-containing protein K09902 - - 0.000000000000000000001158 98.0
PJS3_k127_430015_4 MFS transporter - - - 0.00000000000000001139 87.0
PJS3_k127_432626_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 2.364e-298 947.0
PJS3_k127_432626_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 488.0
PJS3_k127_432626_10 hydrolase K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000001118 257.0
PJS3_k127_432626_11 Maf-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000004097 239.0
PJS3_k127_432626_12 metal-binding, possibly nucleic acid-binding protein K07040 - - 0.000000000000000000000000000000000000000000000000001018 188.0
PJS3_k127_432626_13 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000005346 184.0
PJS3_k127_432626_14 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000003219 108.0
PJS3_k127_432626_2 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 449.0
PJS3_k127_432626_3 peptidase K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 433.0
PJS3_k127_432626_4 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 431.0
PJS3_k127_432626_5 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006175 396.0
PJS3_k127_432626_6 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008266 368.0
PJS3_k127_432626_7 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 368.0
PJS3_k127_432626_8 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 355.0
PJS3_k127_432626_9 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 322.0
PJS3_k127_4331078_0 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 1.775e-218 685.0
PJS3_k127_4331078_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000507 317.0
PJS3_k127_4331078_2 COG1943 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007485 308.0
PJS3_k127_4331078_3 Glutathione-dependent formaldehyde-activating protein - - - 0.0000000000000000000000000000000000000000000000000000007712 198.0
PJS3_k127_4331078_4 CAAX protease self-immunity - - - 0.000000000000000000000000000000000000000000000000000003602 199.0
PJS3_k127_4331078_5 belongs to the bacterial solute-binding protein 3 family K02424,K16961 - - 0.000000000000000000000000000000000000000009977 163.0
PJS3_k127_4331078_6 Membrane - - - 0.000000000000000000000000000000000000007982 151.0
PJS3_k127_4357175_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 3.957e-198 636.0
PJS3_k127_4357175_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 GO:0001522,GO:0003674,GO:0003824,GO:0004123,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009000,GO:0009058,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016769,GO:0016782,GO:0016783,GO:0016829,GO:0016846,GO:0018130,GO:0018131,GO:0019842,GO:0022607,GO:0030170,GO:0031071,GO:0031119,GO:0031163,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046484,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097163,GO:0140104,GO:1901360,GO:1901363 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 509.0
PJS3_k127_4357175_10 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000001266 175.0
PJS3_k127_4357175_11 TIGRFAM Hydrolase, ortholog 1, exosortase system type 1 associated - - - 0.000000000000000000000000000008355 132.0
PJS3_k127_4357175_12 Phosphopantetheine attachment site - - - 0.00000000000000000000003578 101.0
PJS3_k127_4357175_13 Protein involved in cellulose biosynthesis - - - 0.00000000000299 78.0
PJS3_k127_4357175_14 Putative beta-barrel porin 2 - - - 0.000000006236 68.0
PJS3_k127_4357175_15 Serine aminopeptidase, S33 - - - 0.000000006721 66.0
PJS3_k127_4357175_16 DnaJ molecular chaperone homology domain - - - 0.0001109 53.0
PJS3_k127_4357175_2 COG2148 Sugar transferases involved in lipopolysaccharide synthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 431.0
PJS3_k127_4357175_3 serine acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 414.0
PJS3_k127_4357175_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 411.0
PJS3_k127_4357175_5 protein involved in exopolysaccharide biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 354.0
PJS3_k127_4357175_6 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 340.0
PJS3_k127_4357175_7 AMP-binding enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 321.0
PJS3_k127_4357175_8 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 - - 0.0000000000000000000000000000000000000000000000000000000000000001047 225.0
PJS3_k127_4357175_9 Sugar ABC transporter substrate-binding protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000005149 225.0
PJS3_k127_4361299_0 accessory protein K06959 - - 0.0 1154.0
PJS3_k127_4361299_1 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 1.769e-229 721.0
PJS3_k127_4361299_2 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.0000000000000000000000004469 108.0
PJS3_k127_4361299_3 COG0784 FOG CheY-like receiver K02658 - - 0.00000000001893 63.0
PJS3_k127_4369276_0 COG0859 ADP-heptose LPS heptosyltransferase K02841 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 460.0
PJS3_k127_4369276_1 Glycosyl transferases group 1 K02844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 446.0
PJS3_k127_4369276_2 Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core K02848 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006811 345.0
PJS3_k127_4393513_0 transposase IS116 IS110 IS902 family K07486 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001586 258.0
PJS3_k127_4393513_1 - - - - 0.00000000000000004851 89.0
PJS3_k127_4393513_2 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000001538 80.0
PJS3_k127_4397912_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 426.0
PJS3_k127_4397912_1 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 372.0
PJS3_k127_4417535_0 Belongs to the glutamate synthase family - - - 3.187e-242 759.0
PJS3_k127_4417535_1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009381 250.0
PJS3_k127_4419732_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 554.0
PJS3_k127_4419732_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 329.0
PJS3_k127_4419732_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 295.0
PJS3_k127_4419732_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0043021,GO:0043022,GO:0043023,GO:0043086,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0098772 - 0.0000000004463 62.0
PJS3_k127_4429527_0 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 435.0
PJS3_k127_4429527_1 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 301.0
PJS3_k127_4456464_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 1.355e-227 711.0
PJS3_k127_4456464_1 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000007703 215.0
PJS3_k127_4456464_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03972 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005623,GO:0016740,GO:0016782,GO:0016783,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.000000000000000000000000000000005448 136.0
PJS3_k127_4478529_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1410.0
PJS3_k127_4478529_1 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 293.0
PJS3_k127_4478529_2 Repressor involved in choline regulation of the bet genes K02167 - - 0.00000000000000000000000000000000000000000000000006866 184.0
PJS3_k127_4478529_3 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000000000000000006466 108.0
PJS3_k127_4478529_4 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.00000000009943 68.0
PJS3_k127_4478529_5 translation initiation factor activity - - - 0.00003126 50.0
PJS3_k127_4487512_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1038.0
PJS3_k127_4487512_1 - - - - 0.0003504 43.0
PJS3_k127_4510796_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.572e-254 788.0
PJS3_k127_4510796_1 Gluconolactonase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 497.0
PJS3_k127_4510796_2 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 396.0
PJS3_k127_4510796_3 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000000000000000000000008278 150.0
PJS3_k127_4518538_0 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 378.0
PJS3_k127_4518538_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 286.0
PJS3_k127_4518538_2 Sulfurtransferase - - - 0.000000000000000000000000000000000000000000000000000005082 193.0
PJS3_k127_4518538_3 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000000002542 119.0
PJS3_k127_4518538_4 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.000000000000000000000000001826 113.0
PJS3_k127_4519896_0 Molecular chaperone. Has ATPase activity K04079 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0006974,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0042623,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 - 1.36e-268 840.0
PJS3_k127_4519896_1 HipA N-terminal domain - - - 3.52e-196 619.0
PJS3_k127_4519896_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 370.0
PJS3_k127_4519896_3 Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005445 306.0
PJS3_k127_4519896_4 sequence-specific DNA binding - - - 0.0000000000000000000000000009097 116.0
PJS3_k127_4523788_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 567.0
PJS3_k127_4523788_1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 292.0
PJS3_k127_4523788_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006464,GO:0006479,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010468,GO:0016043,GO:0016740,GO:0016741,GO:0018364,GO:0019222,GO:0019538,GO:0022411,GO:0032259,GO:0032984,GO:0034641,GO:0034645,GO:0036009,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043414,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001429 284.0
PJS3_k127_4523788_3 YHYH protein - - - 0.0000000000000000000000000000000000000000000000000000000002533 218.0
PJS3_k127_4523788_4 membrane protein domain - - - 0.00000000000000000000000000000000000000000000000000471 183.0
PJS3_k127_4560018_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 2.346e-194 612.0
PJS3_k127_4560018_1 Cysteine desulfurase activator complex subunit SufB K09014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003473 425.0
PJS3_k127_4560018_2 ABC-type transport system involved in Fe-S cluster assembly, ATPase component K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 413.0
PJS3_k127_4560018_3 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000368 390.0
PJS3_k127_4584108_0 Domain of unknown function (DUF4372) - - - 3.684e-199 625.0
PJS3_k127_4584108_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004103 527.0
PJS3_k127_4584108_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008353 361.0
PJS3_k127_4584108_3 UPF0114 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001078 243.0
PJS3_k127_4612937_0 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 1.066e-211 664.0
PJS3_k127_4612937_1 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.00000000000000000000000000000000000000000000000000000000000007873 216.0
PJS3_k127_4612937_2 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.00000000000000005309 83.0
PJS3_k127_461386_0 Histidine kinase - - - 1.467e-273 867.0
PJS3_k127_461386_1 consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007547 386.0
PJS3_k127_461386_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009347 312.0
PJS3_k127_461386_3 cytochrome c5 - - - 0.000000000000000000000000000000000000000000000000000000000000001296 221.0
PJS3_k127_461386_4 COG2076 Membrane transporters of cations and cationic drugs K11741 - - 0.00000000000000000000000000000000000000006916 153.0
PJS3_k127_461386_5 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.0000000000000001973 80.0
PJS3_k127_462145_0 Heat shock 70 kDa protein K04045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009745 529.0
PJS3_k127_462145_1 COG2076 Membrane transporters of cations and cationic drugs K11741 - - 0.00000000000000000000000000000000000000006599 153.0
PJS3_k127_462145_2 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000000000000000000000000000001118 133.0
PJS3_k127_462145_4 - - - - 0.0000002265 54.0
PJS3_k127_4644571_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019538,GO:0022411,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032984,GO:0034641,GO:0034645,GO:0036094,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 1.242e-253 791.0
PJS3_k127_4644571_1 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 471.0
PJS3_k127_4644571_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 332.0
PJS3_k127_4644571_4 Protein of unknown function (DUF2834) - - - 0.000000000000000000000000000000000001547 142.0
PJS3_k127_4644571_5 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000000000000006906 133.0
PJS3_k127_4644571_6 Cytochrome c - - - 0.000000000000000005115 89.0
PJS3_k127_4647857_0 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 299.0
PJS3_k127_4647857_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002434 244.0
PJS3_k127_466649_0 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 5.294e-243 758.0
PJS3_k127_466649_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 8.296e-238 741.0
PJS3_k127_466649_10 Copper chaperone PCu(A)C K09796 - - 0.000000000000000000002119 99.0
PJS3_k127_466649_2 Protein of unknown function (DUF2817) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 545.0
PJS3_k127_466649_3 Phosphate starvation-inducible protein PhoH K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 494.0
PJS3_k127_466649_4 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006296 286.0
PJS3_k127_466649_5 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000376 244.0
PJS3_k127_466649_6 protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000000000000000002134 219.0
PJS3_k127_466649_7 - - - - 0.000000000000000000000000000000000000000000000000000000000003139 215.0
PJS3_k127_466649_8 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000000000001164 166.0
PJS3_k127_466705_0 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 397.0
PJS3_k127_466705_1 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 332.0
PJS3_k127_466705_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004232 256.0
PJS3_k127_466705_3 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000000000000000000000000000000000000000002069 181.0
PJS3_k127_466705_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0002356 43.0
PJS3_k127_466705_5 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000408 43.0
PJS3_k127_4688133_0 Converts isocitrate to alpha ketoglutarate K00031 - 1.1.1.42 1.512e-259 801.0
PJS3_k127_4688133_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 589.0
PJS3_k127_4688133_2 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005203 285.0
PJS3_k127_4688133_3 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000001572 227.0
PJS3_k127_4688133_4 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016043,GO:0016829,GO:0016849,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0022607,GO:0034214,GO:0042802,GO:0043170,GO:0043545,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0051259,GO:0061799,GO:0065003,GO:0071704,GO:0071840,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000065 216.0
PJS3_k127_4688133_5 High frequency lysogenization protein HflD homolog K07153 - - 0.000000000000000000000000000000003254 136.0
PJS3_k127_4688133_6 Cold-shock' K03704 - - 0.0000000000000000000000000000611 119.0
PJS3_k127_4688133_7 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.00000000000000000001393 93.0
PJS3_k127_4701638_0 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 468.0
PJS3_k127_4701638_1 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006083 463.0
PJS3_k127_4701638_2 pathogenesis - - - 0.000000000000000000003776 101.0
PJS3_k127_4701638_3 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.00000008862 59.0
PJS3_k127_4706526_0 membrane K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207 482.0
PJS3_k127_4706526_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004728 370.0
PJS3_k127_4706526_2 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.0000000000000000000003886 96.0
PJS3_k127_4706526_3 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000008501 94.0
PJS3_k127_4723197_0 L-lysine 6-monooxygenase (NADPH-requiring) K07222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 605.0
PJS3_k127_4723197_1 AraC family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 351.0
PJS3_k127_4723197_2 SBF-like CPA transporter family (DUF4137) K03453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007291 321.0
PJS3_k127_4723197_3 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000004412 79.0
PJS3_k127_4723522_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1148.0
PJS3_k127_4723522_1 Oligopeptidase K01414 - 3.4.24.70 0.0 1055.0
PJS3_k127_4723522_10 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009019 358.0
PJS3_k127_4723522_11 stress-induced protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 339.0
PJS3_k127_4723522_12 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442 326.0
PJS3_k127_4723522_13 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 308.0
PJS3_k127_4723522_14 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 303.0
PJS3_k127_4723522_15 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803 292.0
PJS3_k127_4723522_16 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 285.0
PJS3_k127_4723522_17 Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions K05501 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000918,GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0007049,GO:0007346,GO:0008150,GO:0009295,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010564,GO:0010948,GO:0010974,GO:0016043,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0031323,GO:0031326,GO:0031333,GO:0032271,GO:0032272,GO:0032465,GO:0032466,GO:0032506,GO:0032954,GO:0032955,GO:0042802,GO:0043085,GO:0043087,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043547,GO:0043565,GO:0043590,GO:0044085,GO:0044087,GO:0044093,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045786,GO:0045930,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051252,GO:0051301,GO:0051302,GO:0051336,GO:0051345,GO:0051726,GO:0051782,GO:0060255,GO:0061640,GO:0065007,GO:0065009,GO:0071840,GO:0080090,GO:0090529,GO:0097159,GO:0140110,GO:1901363,GO:1901891,GO:1901892,GO:1902410,GO:1902412,GO:1902413,GO:1903047,GO:1903436,GO:1903437,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003175 266.0
PJS3_k127_4723522_18 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000009328 247.0
PJS3_k127_4723522_19 Nucleoside 2-deoxyribosyltransferase YtoQ - - - 0.0000000000000000000000000000000000000000000000000000000000001027 215.0
PJS3_k127_4723522_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 4.412e-249 787.0
PJS3_k127_4723522_20 endoribonuclease - - - 0.0000000000000000000000000000000000000000000000000000004778 195.0
PJS3_k127_4723522_21 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000003264 190.0
PJS3_k127_4723522_22 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000000000000000007831 143.0
PJS3_k127_4723522_23 Pfam Transposase IS66 - - - 0.00000000000000000000000000000000005683 143.0
PJS3_k127_4723522_24 Gaf domain K01768,K17763 - 4.6.1.1 0.00000000000000000000000000000001177 132.0
PJS3_k127_4723522_25 nucleic-acid-binding protein containing a Zn-ribbon domain K07070 - - 0.00000000000000000001098 93.0
PJS3_k127_4723522_3 phosphomannomutase K15778 - 5.4.2.2,5.4.2.8 2.496e-202 657.0
PJS3_k127_4723522_4 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 1.968e-197 618.0
PJS3_k127_4723522_5 transcriptional regulator K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 497.0
PJS3_k127_4723522_6 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0003824,GO:0004109,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016634,GO:0018130,GO:0019438,GO:0030145,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0046983,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005373 494.0
PJS3_k127_4723522_7 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930,K22478 - 2.3.1.1,2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 486.0
PJS3_k127_4723522_8 protein containing LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 422.0
PJS3_k127_4723522_9 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000913 391.0
PJS3_k127_4733005_0 protein involved in exopolysaccharide biosynthesis K16554,K16692 - - 2.132e-217 697.0
PJS3_k127_4733005_1 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005084 276.0
PJS3_k127_4733005_2 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000000003651 181.0
PJS3_k127_4733005_3 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000003574 175.0
PJS3_k127_4735624_0 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 454.0
PJS3_k127_4735624_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 327.0
PJS3_k127_4735624_2 COG0084 Mg-dependent DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 307.0
PJS3_k127_4735624_3 protein conserved in bacteria - - - 0.000000000000000000000000000004927 125.0
PJS3_k127_4735624_4 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000002691 80.0
PJS3_k127_4738012_0 Glutathione S-transferase K07393 - 1.8.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 467.0
PJS3_k127_4738012_1 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 375.0
PJS3_k127_4738012_2 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004497 350.0
PJS3_k127_4738012_3 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity K01118 - - 0.0000000000000000000000000000000000000000000000000000000000000000001321 237.0
PJS3_k127_4738012_4 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000001085 219.0
PJS3_k127_4738012_5 Bacterial extracellular solute-binding protein - - - 0.000000000000000000000000000000000000000000000000000008644 199.0
PJS3_k127_4738012_6 FR47-like protein - - - 0.00000000000000000000000000000000000000000000007774 181.0
PJS3_k127_4738012_7 protein conserved in bacteria - - - 0.00000000000000000001845 102.0
PJS3_k127_4738012_8 Domain of unknown function (DUF4136) - - - 0.000000000000000261 87.0
PJS3_k127_4752245_0 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 620.0
PJS3_k127_4752245_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 481.0
PJS3_k127_4752245_10 COG2030 Acyl dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000008023 236.0
PJS3_k127_4752245_11 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.0000000000000000000000000000000000000000000000000000000000009331 214.0
PJS3_k127_4752245_12 Putative prokaryotic signal transducing protein - - - 0.00000000000001597 78.0
PJS3_k127_4752245_2 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 446.0
PJS3_k127_4752245_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 437.0
PJS3_k127_4752245_4 Saccharopine dehydrogenase NADP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 436.0
PJS3_k127_4752245_5 COG0515 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 437.0
PJS3_k127_4752245_6 Preprotein translocase subunit SecA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 404.0
PJS3_k127_4752245_7 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005164 366.0
PJS3_k127_4752245_8 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007264 305.0
PJS3_k127_4752245_9 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003651 251.0
PJS3_k127_4761092_0 COG0457 FOG TPR repeat - - - 0.00000007992 63.0
PJS3_k127_476423_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 0.0 1790.0
PJS3_k127_476423_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.657e-225 703.0
PJS3_k127_476423_2 carbamoyl-phosphate synthetase glutamine chain K01956 - 6.3.5.5 2.187e-196 618.0
PJS3_k127_476423_3 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 317.0
PJS3_k127_476423_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000000007087 237.0
PJS3_k127_476423_5 RNA-binding protein containing KH domain, possibly ribosomal protein K07574 - - 0.0000000000000000000000000000000000000000002917 160.0
PJS3_k127_4771142_0 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000001865 201.0
PJS3_k127_4771142_1 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000007869 186.0
PJS3_k127_4773290_0 Pfam:DUF1446 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 323.0
PJS3_k127_4773290_1 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000116 258.0
PJS3_k127_4790609_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1326.0
PJS3_k127_4790609_1 GTP-binding protein TypA K06207 - - 0.0 1007.0
PJS3_k127_4790609_10 Bacterial-like globin K06886 - - 0.000000000000000000000000000000000000000000000000278 179.0
PJS3_k127_4790609_11 Putative ATP-dependant zinc protease - - - 0.0000000000000000000000000000000000002 150.0
PJS3_k127_4790609_12 PFAM Transglycosylase-associated protein - - - 0.00000000000000000000000000002665 119.0
PJS3_k127_4790609_13 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000000002264 117.0
PJS3_k127_4790609_14 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000001964 89.0
PJS3_k127_4790609_15 highly regulated protein controlled by the addition removal of adenylyl groups by adenylyltransferase from specific tyrosine residues K01915 - 6.3.1.2 0.00000000002195 65.0
PJS3_k127_4790609_2 7 transmembrane helices usually fused to an inactive transglutaminase - - - 5.539e-208 657.0
PJS3_k127_4790609_3 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 604.0
PJS3_k127_4790609_4 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 470.0
PJS3_k127_4790609_5 Cobalt zinc cadmium efflux RND transporter outermembrane protein K15725 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 367.0
PJS3_k127_4790609_6 PFAM biotin lipoyl attachment domain-containing protein K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 302.0
PJS3_k127_4790609_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000004483 228.0
PJS3_k127_4790609_8 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000000001949 218.0
PJS3_k127_4790609_9 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000000000000000000000000000000000000001759 212.0
PJS3_k127_47985_0 NADH dehydrogenase K03885 - 1.6.99.3 1.277e-203 642.0
PJS3_k127_47985_1 Histidine kinase K07638 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008288 549.0
PJS3_k127_47985_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 399.0
PJS3_k127_4807190_0 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 GO:0001510,GO:0002128,GO:0002938,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008175,GO:0008757,GO:0009020,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0106050,GO:0140098,GO:0140101,GO:1901360 2.1.1.34 0.00000000000000000000004192 102.0
PJS3_k127_4810345_0 choline dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004842 584.0
PJS3_k127_4810345_2 COG2303 Choline dehydrogenase and related flavoproteins - - - 0.00000000000000000000000000000000000005584 145.0
PJS3_k127_4820107_0 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009683 553.0
PJS3_k127_4820107_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 463.0
PJS3_k127_4820107_2 Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction K00824 - 2.6.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008007 411.0
PJS3_k127_4820107_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 290.0
PJS3_k127_4820107_4 Belongs to the UPF0250 family K09158 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000001014 119.0
PJS3_k127_4820107_5 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000007525 49.0
PJS3_k127_4827223_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1192.0
PJS3_k127_4827223_1 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 353.0
PJS3_k127_4827223_2 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000103 234.0
PJS3_k127_4827223_3 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000000000003116 175.0
PJS3_k127_4827223_4 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000000001938 138.0
PJS3_k127_4860787_0 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 7.677e-206 647.0
PJS3_k127_4860787_1 Neuraminidase (sialidase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 459.0
PJS3_k127_4860787_2 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004591 429.0
PJS3_k127_4860787_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009712 391.0
PJS3_k127_4860787_4 Protein of unknown function (DUF938) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000182 247.0
PJS3_k127_4860787_5 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000174 233.0
PJS3_k127_4860787_6 - - - - 0.0000000000000000000000000000000000000000000000000000005665 199.0
PJS3_k127_4860787_7 Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide K02439 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016740,GO:0016782,GO:0016783,GO:0044424,GO:0044464 2.8.1.1 0.00000000000000000000000004138 111.0
PJS3_k127_4870629_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006326 594.0
PJS3_k127_4870629_1 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000001127 117.0
PJS3_k127_4870629_2 cell division K03586 GO:0000003,GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0019954,GO:0022402,GO:0022414,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0043093,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0071944 - 0.0000000000000000000000006025 104.0
PJS3_k127_4916542_0 Esterase lipase K14731 - 3.1.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 444.0
PJS3_k127_495595_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.247e-261 812.0
PJS3_k127_495595_1 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000000000002789 186.0
PJS3_k127_5004921_0 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000001042 223.0
PJS3_k127_5021144_0 COG1109 Phosphomannomutase K01840,K15778 GO:0003674,GO:0003824,GO:0004615,GO:0005975,GO:0008150,GO:0008152,GO:0016853,GO:0016866,GO:0016868,GO:0044238,GO:0071704 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 513.0
PJS3_k127_5027000_0 DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes K05591 GO:0000027,GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033677,GO:0034458,GO:0034459,GO:0034622,GO:0034641,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:0140098,GO:1901265,GO:1901360,GO:1901363 3.6.4.13 3.108e-234 730.0
PJS3_k127_5027000_1 with the alpha beta hydrolase fold K01046 - 3.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 490.0
PJS3_k127_5027000_2 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 443.0
PJS3_k127_5027000_3 Protein of unknown function (DUF2914) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 413.0
PJS3_k127_5027000_4 COG1309 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002233 252.0
PJS3_k127_5027000_5 START domain - - - 0.00000000000000000000000000000000000000000000000000000000007507 214.0
PJS3_k127_5047339_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 2.336e-256 796.0
PJS3_k127_5047339_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 561.0
PJS3_k127_5047339_2 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 316.0
PJS3_k127_5047339_3 TetR family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005039 246.0
PJS3_k127_5047339_4 - - - - 0.00000000000000000000000000000001668 128.0
PJS3_k127_5047339_5 exonuclease recJ K07462 - - 0.00000000000000000003484 95.0
PJS3_k127_5055383_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 485.0
PJS3_k127_5055383_1 Chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 462.0
PJS3_k127_5055383_2 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007311 456.0
PJS3_k127_5055383_3 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000001736 226.0
PJS3_k127_5070776_0 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K01825 - 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 1.579e-299 925.0
PJS3_k127_5084956_1 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000001829 184.0
PJS3_k127_5084956_2 Bacterial DNA-binding protein - - - 0.00000000000000000000000000000000003686 136.0
PJS3_k127_5084956_3 Aminopeptidase - - - 0.00000000000000000000000005189 112.0
PJS3_k127_5089179_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 1.121e-212 668.0
PJS3_k127_5089179_1 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000000000000003795 212.0
PJS3_k127_5089179_2 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000000000007185 124.0
PJS3_k127_5109815_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 2.337e-210 662.0
PJS3_k127_5109815_1 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 6.511e-195 618.0
PJS3_k127_5109815_10 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00000000000000000000000000000000000000000000002892 176.0
PJS3_k127_5109815_11 transcriptional regulator K03892 - - 0.0000000000000000000000000000004045 124.0
PJS3_k127_5109815_12 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000001973 104.0
PJS3_k127_5109815_13 NADPH-dependent FMN reductase K11811 - - 0.0000000347 58.0
PJS3_k127_5109815_2 Phosphate ABC transporter substrate-binding protein K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 545.0
PJS3_k127_5109815_3 COG0581 ABC-type phosphate transport system, permease component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 544.0
PJS3_k127_5109815_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 477.0
PJS3_k127_5109815_5 COG0798 Arsenite efflux pump ACR3 and related permeases K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007104 472.0
PJS3_k127_5109815_6 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 402.0
PJS3_k127_5109815_7 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008767 287.0
PJS3_k127_5109815_8 hydrolase K10806 - - 0.00000000000000000000000000000000000000000000000000000001578 200.0
PJS3_k127_5109815_9 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000005314 197.0
PJS3_k127_5120231_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1170.0
PJS3_k127_5120231_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006445 452.0
PJS3_k127_5120231_2 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008 422.0
PJS3_k127_5120231_3 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006098 361.0
PJS3_k127_5120231_4 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 323.0
PJS3_k127_5120231_5 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000001334 190.0
PJS3_k127_5120231_6 Belongs to the skp family K06142 GO:0001530,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009279,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0019867,GO:0022417,GO:0022607,GO:0030288,GO:0030312,GO:0030313,GO:0031647,GO:0031975,GO:0032978,GO:0033036,GO:0034613,GO:0042597,GO:0042802,GO:0043163,GO:0043165,GO:0043170,GO:0044085,GO:0044091,GO:0044238,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0050821,GO:0051082,GO:0051179,GO:0051205,GO:0051234,GO:0051604,GO:0051641,GO:0061024,GO:0061077,GO:0065007,GO:0065008,GO:0070727,GO:0071704,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0097367,GO:1901564 - 0.0006926 49.0
PJS3_k127_5129059_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 4.766e-303 933.0
PJS3_k127_5129059_1 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 4.408e-280 867.0
PJS3_k127_5129059_10 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 494.0
PJS3_k127_5129059_11 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 418.0
PJS3_k127_5129059_12 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344 331.0
PJS3_k127_5129059_13 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008045 321.0
PJS3_k127_5129059_14 COG3063 Tfp pilus assembly protein PilF K02656 - - 0.00000000000000000000000000000000000000000000000000000000000009222 221.0
PJS3_k127_5129059_15 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000359 178.0
PJS3_k127_5129059_16 protein conserved in bacteria K15539 - - 0.00000000000000000000000000000000000000000001088 173.0
PJS3_k127_5129059_17 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000004074 116.0
PJS3_k127_5129059_18 Cbb3-type cytochrome oxidase component FixQ K00407 - - 0.00000000000001833 75.0
PJS3_k127_5129059_19 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.0000000002866 60.0
PJS3_k127_5129059_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.831e-262 814.0
PJS3_k127_5129059_3 COG2217 Cation transport ATPase K01533 - 3.6.3.4 1.975e-212 689.0
PJS3_k127_5129059_4 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 1.546e-210 678.0
PJS3_k127_5129059_5 histidyl-tRNA synthetase K01892 - 6.1.1.21 8.456e-207 650.0
PJS3_k127_5129059_6 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 1.491e-195 619.0
PJS3_k127_5129059_7 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 603.0
PJS3_k127_5129059_8 Histidine kinase K20974 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 604.0
PJS3_k127_5129059_9 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046429,GO:0046490,GO:0046872,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 511.0
PJS3_k127_5145054_0 Flavin-binding monooxygenase-like - - - 7.909e-285 880.0
PJS3_k127_5145054_1 Histidine kinase K07636 - 2.7.13.3 1.328e-206 649.0
PJS3_k127_5145054_10 ABC-type Zn2 transport system, periplasmic component surface adhesin K09815 - - 0.0000000000000000000000000000000000000000000000000000000002804 215.0
PJS3_k127_5145054_12 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.000000000000000000000000000000000000000000000000001205 190.0
PJS3_k127_5145054_13 rubredoxin - - - 0.0000000000000000000000000007058 114.0
PJS3_k127_5145054_14 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000002759 107.0
PJS3_k127_5145054_2 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008673 556.0
PJS3_k127_5145054_3 Pyridine nucleotide-disulphide oxidoreductase K05297 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0015046,GO:0016491,GO:0016730,GO:0016731,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.18.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 549.0
PJS3_k127_5145054_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 513.0
PJS3_k127_5145054_5 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 419.0
PJS3_k127_5145054_6 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005976 416.0
PJS3_k127_5145054_7 Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system K09817 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 364.0
PJS3_k127_5145054_8 COG1108 ABC-type Mn2 Zn2 transport systems, permease components K09816 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004897 339.0
PJS3_k127_5145054_9 Sugar-binding cellulase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005037 289.0
PJS3_k127_5156308_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1221.0
PJS3_k127_5156308_1 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000000000006218 211.0
PJS3_k127_5156308_2 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.0000000000000000000000000000000000000009908 152.0
PJS3_k127_5156308_3 MMPL family K07003 - - 0.00000000000000000000000000000000002003 143.0
PJS3_k127_5156308_4 thiolester hydrolase activity - - - 0.000000000000000000000000271 111.0
PJS3_k127_5177064_0 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 551.0
PJS3_k127_5177064_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 532.0
PJS3_k127_5177064_2 Peptidase, M16 K00960,K07263 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 524.0
PJS3_k127_5177064_3 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 437.0
PJS3_k127_5177064_4 cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 370.0
PJS3_k127_5177064_5 hydrolase of the alpha beta-hydrolase fold K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 305.0
PJS3_k127_5177064_6 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001068 281.0
PJS3_k127_5177064_7 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000000000000000000000000003915 256.0
PJS3_k127_5177064_8 Pilus assembly protein, PilP K02665 - - 0.0005415 48.0
PJS3_k127_5180147_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 3.811e-227 709.0
PJS3_k127_5180147_1 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008354 315.0
PJS3_k127_5180147_2 - - - - 0.00000000001044 67.0
PJS3_k127_5184169_0 Transposase IS66 family K07484 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 308.0
PJS3_k127_528585_0 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000536 488.0
PJS3_k127_528585_1 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000001739 259.0
PJS3_k127_528585_2 domain, Protein K03112 - - 0.0000000000000000000000000000000001631 148.0
PJS3_k127_5290884_0 belongs to the aldehyde dehydrogenase family K00154 - 1.2.1.68 6.742e-216 680.0
PJS3_k127_5290884_1 - - - - 0.0000000000000000000000000000000000000003205 155.0
PJS3_k127_5290884_2 GMC oxidoreductase family - - - 0.000000000000000009096 85.0
PJS3_k127_5290884_3 transcriptional regulator - - - 0.00000003239 54.0
PJS3_k127_530075_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006454 498.0
PJS3_k127_530075_1 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 342.0
PJS3_k127_530075_2 - - - - 0.00000000000000000000000000000000000000000000000000000005541 198.0
PJS3_k127_530075_3 transcriptional regulator - - - 0.000000000000000000000000000001086 123.0
PJS3_k127_5305769_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18989 - - 0.0 1284.0
PJS3_k127_5305769_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 2.334e-289 893.0
PJS3_k127_5305769_10 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005909 502.0
PJS3_k127_5305769_11 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 502.0
PJS3_k127_5305769_12 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 487.0
PJS3_k127_5305769_13 phosphotransferase related to Ser Thr protein K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 464.0
PJS3_k127_5305769_14 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 448.0
PJS3_k127_5305769_15 COG2070 Dioxygenases related to 2-nitropropane dioxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 425.0
PJS3_k127_5305769_16 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007127 395.0
PJS3_k127_5305769_17 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 372.0
PJS3_k127_5305769_18 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 364.0
PJS3_k127_5305769_19 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006383 346.0
PJS3_k127_5305769_2 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 3.282e-273 862.0
PJS3_k127_5305769_20 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 340.0
PJS3_k127_5305769_21 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 321.0
PJS3_k127_5305769_22 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 303.0
PJS3_k127_5305769_23 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004165 287.0
PJS3_k127_5305769_24 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005456 276.0
PJS3_k127_5305769_25 redox protein, regulator of disulfide bond formation K07397 - - 0.000000000000000000000000000000000000000000000000000000000000000005828 228.0
PJS3_k127_5305769_26 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000000000000000000000000000000005255 209.0
PJS3_k127_5305769_27 Transcriptional regulators - - - 0.0000000000000000000000000000000000000000000000000000000004622 208.0
PJS3_k127_5305769_28 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000004632 193.0
PJS3_k127_5305769_29 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000004821 190.0
PJS3_k127_5305769_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 1.49e-256 797.0
PJS3_k127_5305769_30 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 - - 0.00000000000000000000000000000000000000001883 155.0
PJS3_k127_5305769_31 Regulatory protein MarR - - - 0.00000000000000000000000000000002268 132.0
PJS3_k127_5305769_32 Histidine kinase - - - 0.0002991 53.0
PJS3_k127_5305769_4 Belongs to the GARS family K01945 - 6.3.4.13 1.438e-224 701.0
PJS3_k127_5305769_5 Histidine kinase K20972,K20973 - 2.7.13.3 1.753e-224 728.0
PJS3_k127_5305769_6 COG0464 ATPases of the AAA class - - - 5.228e-216 679.0
PJS3_k127_5305769_7 TonB-dependent receptor K02014 - - 2.875e-209 670.0
PJS3_k127_5305769_8 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 544.0
PJS3_k127_5305769_9 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 507.0
PJS3_k127_5312641_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 6.385e-205 643.0
PJS3_k127_5312641_1 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000000000000000000004337 224.0
PJS3_k127_5323054_0 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000904 406.0
PJS3_k127_5323054_1 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000002171 161.0
PJS3_k127_5323054_2 Heme iron utilization protein - - - 0.000000000000000000000000000000293 132.0
PJS3_k127_5323054_3 Methyltransferase K07443 - - 0.0000000000000000000000000005564 116.0
PJS3_k127_5335059_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1394.0
PJS3_k127_5335059_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 4.221e-202 643.0
PJS3_k127_5335059_10 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000001358 195.0
PJS3_k127_5335059_11 Membrane protein required for beta-lactamase induction K03807 - - 0.0000000000000000000000000000000000000000007153 168.0
PJS3_k127_5335059_12 - - - - 0.00000000000001114 75.0
PJS3_k127_5335059_13 Methyltransferase K07443 - - 0.0000000000003391 70.0
PJS3_k127_5335059_14 COG3678 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein - - - 0.0000000002561 66.0
PJS3_k127_5335059_2 alanine symporter K03310 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005951 600.0
PJS3_k127_5335059_3 Acetyl-coenzyme A transporter 1 K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004139 520.0
PJS3_k127_5335059_4 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 434.0
PJS3_k127_5335059_5 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 375.0
PJS3_k127_5335059_6 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 353.0
PJS3_k127_5335059_7 Histidine kinase K07642 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 335.0
PJS3_k127_5335059_8 Negative regulator of beta-lactamase expression K03806 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000001589 257.0
PJS3_k127_5335059_9 Transcriptional regulatory protein, C terminal K07664 - - 0.00000000000000000000000000000000000000000000000000000000000000000001597 241.0
PJS3_k127_5345215_0 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000003585 233.0
PJS3_k127_5345215_3 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000001872 49.0
PJS3_k127_5356400_0 Domain of unknown function (DUF4105) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 346.0
PJS3_k127_5356400_1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 331.0
PJS3_k127_5356400_3 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001436 233.0
PJS3_k127_5356400_5 Transglutaminase-like - - - 0.00000000000000000003809 104.0
PJS3_k127_5356400_6 - - - - 0.000000000000004 81.0
PJS3_k127_5359209_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 366.0
PJS3_k127_5359209_2 negative regulation of transcription, DNA-templated K10917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 344.0
PJS3_k127_5373720_0 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.0 1117.0
PJS3_k127_5373720_1 multicopper oxidases - - - 9.655e-274 855.0
PJS3_k127_5373720_10 - - - - 0.0003497 47.0
PJS3_k127_5373720_2 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 2.865e-232 722.0
PJS3_k127_5373720_3 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 3.771e-227 724.0
PJS3_k127_5373720_4 Member of a two-component regulatory system K07644 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 452.0
PJS3_k127_5373720_5 Copper resistance protein B precursor (CopB) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 368.0
PJS3_k127_5373720_6 Transcriptional regulatory protein, C terminal K07665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 366.0
PJS3_k127_5373720_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000716 241.0
PJS3_k127_5373720_8 - - - - 0.000000000000000009459 89.0
PJS3_k127_5373720_9 P-Type ATPase K17686 GO:0000041,GO:0000139,GO:0003674,GO:0003824,GO:0004008,GO:0005215,GO:0005375,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005798,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0006873,GO:0006875,GO:0006878,GO:0006879,GO:0008150,GO:0008324,GO:0009987,GO:0012505,GO:0012506,GO:0012510,GO:0015075,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019725,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030133,GO:0030135,GO:0030136,GO:0030140,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030665,GO:0031090,GO:0031224,GO:0031410,GO:0031982,GO:0031984,GO:0034220,GO:0035434,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0043682,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046873,GO:0046914,GO:0046915,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055070,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0060003,GO:0065007,GO:0065008,GO:0090662,GO:0097708,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098791,GO:0098805,GO:0099131,GO:0099132 3.6.3.54 0.00001418 50.0
PJS3_k127_5399220_0 Transposase DDE domain - - - 3.426e-224 708.0
PJS3_k127_5415157_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 8.503e-254 803.0
PJS3_k127_5415157_1 Belongs to the DEAD box helicase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 410.0
PJS3_k127_5415157_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003374 275.0
PJS3_k127_5415157_3 Thioesterase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000003883 226.0
PJS3_k127_5415157_4 MltA-interacting MipA K07274 - - 0.000000000000000000000000000006919 121.0
PJS3_k127_5415157_5 Bacterial protein of unknown function (DUF883) - - - 0.0000000005453 64.0
PJS3_k127_5415557_0 ATPase components of ABC transporters with duplicated ATPase domains - - - 2.886e-288 894.0
PJS3_k127_5415557_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 382.0
PJS3_k127_5415557_2 TIGRFAM phenylacetate-CoA oxygenase reductase, PaaK subunit K02613,K15983 - 1.14.13.142 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 364.0
PJS3_k127_5415557_3 protein conserved in bacteria K00243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 317.0
PJS3_k127_5415557_4 Represses the transcription of fabB, involved in unsaturated fatty acid (UFA) biosynthesis. By controlling UFA production, FabR directly influences the physical properties of the membrane bilayer K22105 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002508 270.0
PJS3_k127_5415557_5 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000316 263.0
PJS3_k127_5415557_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003352 247.0
PJS3_k127_5415557_7 Fatty acid desaturase - - - 0.00000000000000000000000000000000000000001087 155.0
PJS3_k127_5415557_8 Protein of unknown function (DUF2750) - - - 0.00000000000000000000000000000005752 128.0
PJS3_k127_5416261_0 Acyltransferase - - - 1.346e-315 975.0
PJS3_k127_5416261_1 COG1960 Acyl-CoA dehydrogenases - - - 3.308e-202 634.0
PJS3_k127_5416261_10 - - - - 0.00000000005491 68.0
PJS3_k127_5416261_11 transcriptional regulator - - - 0.00000008962 62.0
PJS3_k127_5416261_2 flavoprotein involved in K transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 542.0
PJS3_k127_5416261_3 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 392.0
PJS3_k127_5416261_4 Catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 376.0
PJS3_k127_5416261_5 acetyltransferases and hydrolases with the alpha beta hydrolase fold K01046 - 3.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006509 372.0
PJS3_k127_5416261_6 COG2818 3-methyladenine DNA glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 294.0
PJS3_k127_5416261_7 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006366 253.0
PJS3_k127_5416261_8 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000186 188.0
PJS3_k127_5416261_9 - - - - 0.0000000000000000000000000000000000003164 154.0
PJS3_k127_5417834_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 3.314e-242 756.0
PJS3_k127_5417834_1 COG0147 Anthranilate para-aminobenzoate synthases component I K01665 - 2.6.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 360.0
PJS3_k127_5417834_2 Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA K11391 - 2.1.1.174 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 325.0
PJS3_k127_5417834_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 304.0
PJS3_k127_5417834_4 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000003104 116.0
PJS3_k127_5419814_0 Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01886 - 6.1.1.18 2.366e-281 872.0
PJS3_k127_5419814_1 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007877 351.0
PJS3_k127_5419814_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004112 269.0
PJS3_k127_5419814_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000001719 235.0
PJS3_k127_5419814_4 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 - - 0.000000000000000000000000000000000000000000000000009463 181.0
PJS3_k127_5491044_0 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases K06183 - 5.4.99.19 0.00000000000000000000000000000000000000000000000000000004679 199.0
PJS3_k127_5491044_1 S4 RNA-binding domain K06183 - 5.4.99.19 0.00000000000000000000000009562 108.0
PJS3_k127_5491044_2 Domain of unknown function (DUF3520) K07114 - - 0.000000000000000000000005182 117.0
PJS3_k127_5492500_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004843 289.0
PJS3_k127_5492500_1 diguanylate cyclase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000004386 242.0
PJS3_k127_5502938_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K20455 - 4.2.1.117 0.0 1252.0
PJS3_k127_5502938_1 Belongs to the citrate synthase family K01659 - 2.3.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 411.0
PJS3_k127_550847_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 547.0
PJS3_k127_550847_1 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 484.0
PJS3_k127_550847_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000008139 210.0
PJS3_k127_550847_3 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.0000000000000000000000000000000000000000000000000002014 191.0
PJS3_k127_5512316_0 Involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain K03578 - 3.6.4.13 0.0 1531.0
PJS3_k127_5512316_1 protease with the C-terminal PDZ domain - - - 1.634e-263 823.0
PJS3_k127_5512316_2 differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs K00648,K16872 - 2.3.1.180,2.3.1.207 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 584.0
PJS3_k127_5512316_3 Belongs to the UPF0276 family K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009975 426.0
PJS3_k127_5512316_4 - - - - 0.0000000000000000000000000000000000000699 145.0
PJS3_k127_5523253_0 belongs to the bacterial solute-binding protein 3 family K02030,K02424,K10036 - - 0.000000000000000000000000000000000000000000000000000000000000000002065 235.0
PJS3_k127_5527789_0 membrane - - - 1.208e-276 897.0
PJS3_k127_5527789_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 4.782e-251 781.0
PJS3_k127_5527789_10 Belongs to the UPF0307 family K09889 - - 0.000000000000000000000000000000000000000002632 161.0
PJS3_k127_5527789_11 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000001145 123.0
PJS3_k127_5527789_2 Responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase K03568 - - 2.559e-233 729.0
PJS3_k127_5527789_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 8.587e-208 652.0
PJS3_k127_5527789_4 Rod shape-determining protein K03569 - - 5.19e-202 634.0
PJS3_k127_5527789_5 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 340.0
PJS3_k127_5527789_6 Carbon-nitrogen hydrolase family protein K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 317.0
PJS3_k127_5527789_7 Protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 317.0
PJS3_k127_5527789_8 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000002342 202.0
PJS3_k127_5527789_9 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.00000000000000000000000000000000000000000000009106 173.0
PJS3_k127_5542094_0 protein involved in outer membrane biogenesis K07289 - - 2.355e-212 677.0
PJS3_k127_5542094_1 COG1194 A G-specific DNA glycosylase K03575 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 436.0
PJS3_k127_5542094_2 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000000003382 147.0
PJS3_k127_5542094_3 - - - - 0.000001963 51.0
PJS3_k127_5558805_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 5.674e-224 713.0
PJS3_k127_5558805_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009043 504.0
PJS3_k127_5558805_2 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 361.0
PJS3_k127_5558805_3 Protein of unknown function (DUF1275) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001572 268.0
PJS3_k127_5558805_4 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K05710 - - 0.0000000000000000000000000000000000000000000003523 168.0
PJS3_k127_5558805_5 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 0.000000000000000000000000000000008731 130.0
PJS3_k127_5558805_6 Domain of unknown function (DUF4112) - - - 0.000000000000000000000000000266 121.0
PJS3_k127_5598179_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 553.0
PJS3_k127_5598179_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 357.0
PJS3_k127_5598179_2 COG1428 Deoxynucleoside kinases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 318.0
PJS3_k127_5598179_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 295.0
PJS3_k127_5598179_4 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.000000000000000000000000000000000000008407 151.0
PJS3_k127_5598765_0 COG0501 Zn-dependent protease with chaperone function - - - 2.347e-197 634.0
PJS3_k127_5598765_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006396 514.0
PJS3_k127_5598765_2 protein conserved in bacteria K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007077 426.0
PJS3_k127_5598765_3 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 329.0
PJS3_k127_5598765_4 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001524 281.0
PJS3_k127_5598765_5 Cold-shock' K03704 - - 0.0000000000000000000000000000000000000000000000000001819 192.0
PJS3_k127_5601806_0 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates K01637 - 4.1.3.1 6.773e-230 714.0
PJS3_k127_5608532_0 belongs to the aldehyde dehydrogenase family K22445 - 1.2.99.10 1.967e-254 794.0
PJS3_k127_5608532_1 Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 595.0
PJS3_k127_5608532_2 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008136 574.0
PJS3_k127_5608532_3 Catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006294 517.0
PJS3_k127_5608532_4 Belongs to the ArsC family K00537 - 1.20.4.1 0.00000000000000000000000000000000000000000001252 164.0
PJS3_k127_5618248_0 Belongs to the amidase family K01426 - 3.5.1.4 8.145e-255 792.0
PJS3_k127_5618248_1 redox protein, regulator of disulfide bond formation K09136 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018193,GO:0018197,GO:0018198,GO:0018339,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0047429,GO:0047693,GO:0071704,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 549.0
PJS3_k127_5618248_2 Metal-dependent hydrolase K07043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007364 263.0
PJS3_k127_5618248_3 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000000000000000000000001363 139.0
PJS3_k127_5618248_4 MarR family - - - 0.00000000000000000000000000000000001408 139.0
PJS3_k127_5647964_0 amino acid aldolase or racemase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 509.0
PJS3_k127_5647964_1 COG0277 FAD FMN-containing dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 506.0
PJS3_k127_5647964_2 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 464.0
PJS3_k127_5647964_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005283 317.0
PJS3_k127_5647964_4 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 311.0
PJS3_k127_5647964_5 Pyridoxal-phosphate dependent enzyme K01505 - 3.5.99.7 0.000000000000000000000000000000000000000000000000000000000000000002307 241.0
PJS3_k127_5647964_6 RHS Repeat - - - 0.000000000000000000000000000000000000000000006665 169.0
PJS3_k127_5647964_7 - - - - 0.000006878 56.0
PJS3_k127_5661991_0 NADPH-dependent FMN reductase K11811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 316.0
PJS3_k127_5661991_1 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006649 250.0
PJS3_k127_5661991_2 Belongs to the SlyX family K03745 - - 0.0000006857 53.0
PJS3_k127_5686232_0 Aminoglycoside phosphotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 457.0
PJS3_k127_5686232_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 388.0
PJS3_k127_5686232_2 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000002509 181.0
PJS3_k127_5686232_3 - - - - 0.0000000000000000000000000000000000000000005601 160.0
PJS3_k127_5686232_4 protein conserved in bacteria - - - 0.000000000000000000001842 100.0
PJS3_k127_5690899_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 2.102e-245 764.0
PJS3_k127_5690899_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 8.107e-245 766.0
PJS3_k127_5690899_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 561.0
PJS3_k127_5690899_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000055 537.0
PJS3_k127_5690899_4 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 420.0
PJS3_k127_5690899_5 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 311.0
PJS3_k127_5690899_6 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000000000000000003628 139.0
PJS3_k127_5699108_0 transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 535.0
PJS3_k127_5703323_0 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005446 274.0
PJS3_k127_5703323_1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast K02881 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000002143 183.0
PJS3_k127_5703323_2 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000007428 166.0
PJS3_k127_5703323_3 Ribosomal protein L30 K02907 - - 0.00000000002146 64.0
PJS3_k127_5710493_0 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates K01637 - 4.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005781 338.0
PJS3_k127_5710493_1 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.000000000000000000000000000000000000005764 156.0
PJS3_k127_5710493_2 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00007494 46.0
PJS3_k127_573355_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 6.504e-248 777.0
PJS3_k127_573355_1 fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 575.0
PJS3_k127_573355_2 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 425.0
PJS3_k127_573355_3 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000399 397.0
PJS3_k127_573355_4 COG1132 ABC-type multidrug transport system, ATPase and permease components K06147,K18893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 323.0
PJS3_k127_573355_5 helix_turn_helix ASNC type K03719 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001687 244.0
PJS3_k127_573355_6 Belongs to the MtfA family K09933 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006508,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009889,GO:0010468,GO:0010556,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0043170,GO:0043433,GO:0044092,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0048519,GO:0050789,GO:0050794,GO:0051090,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0065009,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000839 109.0
PJS3_k127_5739428_0 acetyltransferases and hydrolases with the alpha beta hydrolase fold K01046 - 3.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 524.0
PJS3_k127_5739428_1 electron transfer flavoprotein, alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 489.0
PJS3_k127_5739428_2 haloacid K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 436.0
PJS3_k127_5739428_3 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 406.0
PJS3_k127_5739428_4 PhnA protein K06193 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001711 262.0
PJS3_k127_5739428_5 Lipase chaperone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000212 245.0
PJS3_k127_5739428_6 - - - - 0.0000000000000000000000006754 109.0
PJS3_k127_5739428_7 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.0000000000000000000001006 99.0
PJS3_k127_576601_0 - - - - 6.555e-246 775.0
PJS3_k127_576601_1 BCCT, betaine/carnitine/choline family transporter K03451 - - 3.745e-243 761.0
PJS3_k127_576601_10 mRNA catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001628 245.0
PJS3_k127_576601_11 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000007542 237.0
PJS3_k127_576601_12 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001238 237.0
PJS3_k127_576601_13 MAPEG family - - - 0.000000000000000000000000000000000000000000000000000000000000000004591 228.0
PJS3_k127_576601_14 membrane - - - 0.000000000000000000000000000000000000000000000002613 175.0
PJS3_k127_576601_15 - - - - 0.00000000000000000000000000000000000000000002647 169.0
PJS3_k127_576601_2 acyl-CoA transferases carnitine dehydratase K07749 - 2.8.3.16 2.482e-205 645.0
PJS3_k127_576601_3 Belongs to the peptidase S1C family K04691,K04771,K04772 - 3.4.21.107 5.196e-205 646.0
PJS3_k127_576601_4 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 593.0
PJS3_k127_576601_5 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 575.0
PJS3_k127_576601_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 496.0
PJS3_k127_576601_7 Beta-lactamase class C and other penicillin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009538 481.0
PJS3_k127_576601_8 COG1718 Serine threonine protein kinase involved in cell cycle control K07178 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 441.0
PJS3_k127_576601_9 Histidine-specific methyltransferase, SAM-dependent K18911 - 2.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 415.0
PJS3_k127_5775845_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 1.047e-206 646.0
PJS3_k127_5775845_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 480.0
PJS3_k127_5775845_2 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.00000000000000000000000000000000009477 146.0
PJS3_k127_5827029_0 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271,K12961 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 317.0
PJS3_k127_5827029_1 periplasmic or secreted lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002442 245.0
PJS3_k127_5839759_0 Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate K00265 - 1.4.1.13,1.4.1.14 0.0 2525.0
PJS3_k127_5839759_1 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 5.651e-280 864.0
PJS3_k127_5839759_10 Domain of unknown function (DUF4442) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002857 235.0
PJS3_k127_5839759_11 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000004814 223.0
PJS3_k127_5839759_12 Competence protein - - - 0.0000000000000000000000000000000000000000000000009742 183.0
PJS3_k127_5839759_13 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000000000000000004274 174.0
PJS3_k127_5839759_14 FlgJ-related protein K03796 - - 0.0000000000000000000000000000000000000000000001334 177.0
PJS3_k127_5839759_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 1.549e-199 625.0
PJS3_k127_5839759_3 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 592.0
PJS3_k127_5839759_4 May be involved in recombination K03554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007633 458.0
PJS3_k127_5839759_5 fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 354.0
PJS3_k127_5839759_6 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 312.0
PJS3_k127_5839759_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006726 311.0
PJS3_k127_5839759_8 Belongs to the ComB family K05979 - 3.1.3.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001252 280.0
PJS3_k127_5858983_0 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 397.0
PJS3_k127_5858983_1 TRAP transporter T-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 381.0
PJS3_k127_5858983_10 cyclic nucleotide binding K10914 - - 0.0000000000000000542 89.0
PJS3_k127_5858983_2 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 339.0
PJS3_k127_5858983_3 Putative aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 334.0
PJS3_k127_5858983_4 membrane protein (homolog of Drosophila rhomboid) K02441 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008393 312.0
PJS3_k127_5858983_5 Elongation factor P K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000239 269.0
PJS3_k127_5858983_6 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000003659 244.0
PJS3_k127_5858983_7 permease - - - 0.0000000000000000000000000000000000001036 155.0
PJS3_k127_5858983_8 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000002499 91.0
PJS3_k127_5858983_9 Belongs to the ompA family K03286 - - 0.0000000000000000291 85.0
PJS3_k127_5859606_0 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 4.583e-247 767.0
PJS3_k127_5859606_1 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 1.776e-217 692.0
PJS3_k127_5859606_2 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 368.0
PJS3_k127_5859606_3 Protein of unknown function (DUF3426) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 308.0
PJS3_k127_5859606_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 GO:0002943,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050896,GO:0055114,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 286.0
PJS3_k127_5859606_5 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000000008843 233.0
PJS3_k127_5859606_6 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000000000008895 207.0
PJS3_k127_5859606_7 Thioredoxin - - - 0.0000000000000000000000000000000000000000000007804 171.0
PJS3_k127_5865785_0 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K12136 - - 5.256e-263 829.0
PJS3_k127_5865785_1 Helicase associated domain (HA2) Add an annotation K03579 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 369.0
PJS3_k127_5867795_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 1.514e-269 833.0
PJS3_k127_5867795_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0000096,GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004478,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006556,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009069,GO:0009108,GO:0009116,GO:0009119,GO:0009987,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0019752,GO:0030554,GO:0030955,GO:0031420,GO:0032553,GO:0032555,GO:0032559,GO:0033353,GO:0034641,GO:0035639,GO:0036094,GO:0042278,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046872,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1901605,GO:1901657 2.5.1.6 2.455e-215 672.0
PJS3_k127_5867795_2 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004544 417.0
PJS3_k127_5867795_3 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000001822 166.0
PJS3_k127_5867795_4 DNA-binding protein VF530 - GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000005296 136.0
PJS3_k127_5870320_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 450.0
PJS3_k127_5870320_1 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003587 280.0
PJS3_k127_5870320_2 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.0004362 43.0
PJS3_k127_5872607_0 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K13776 - - 0.0 1001.0
PJS3_k127_5872607_1 Acetyl propionyl-CoA carboxylase, alpha subunit K13777 - 6.4.1.5 7.816e-278 868.0
PJS3_k127_5872607_2 Acetyl-CoA carboxylase K13778 - 6.4.1.5 5.808e-271 844.0
PJS3_k127_5872607_3 acyl-CoA dehydrogenase K11731 - - 6.021e-231 717.0
PJS3_k127_5872607_4 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K13774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 497.0
PJS3_k127_5872607_5 enoyl-CoA hydratase K13779 - 4.2.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 388.0
PJS3_k127_5872607_6 Pfam:DUF1446 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 347.0
PJS3_k127_5873494_0 Domain of unknown function (DUF4331) - - - 2.025e-279 864.0
PJS3_k127_5873494_1 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 449.0
PJS3_k127_5873494_2 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039 350.0
PJS3_k127_5873494_3 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000002264 227.0
PJS3_k127_5873494_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000002225 201.0
PJS3_k127_5873494_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000006787 58.0
PJS3_k127_5873494_7 - - - - 0.0000004463 52.0
PJS3_k127_5879158_0 Belongs to the heat shock protein 70 family K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004228 621.0
PJS3_k127_5879158_2 Peptidase family M48 - - - 0.0000000004458 63.0
PJS3_k127_5879158_3 negative regulation of transcription, DNA-templated K10917 - - 0.000006658 50.0
PJS3_k127_5879158_4 Putative diguanylate phosphodiesterase - - - 0.00001126 49.0
PJS3_k127_588145_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 - 1.10.3.10,1.9.3.1 0.0 1004.0
PJS3_k127_588145_1 Heme copper-type cytochrome quinol oxidase, subunit 3 K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 447.0
PJS3_k127_588145_2 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 377.0
PJS3_k127_588145_3 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 344.0
PJS3_k127_588145_4 oxidase assembly K02258 - - 0.00000000000000000000000000000000000000000000000000000000000001665 220.0
PJS3_k127_588145_5 Glycosyltransferases involved in cell wall biogenesis K19354 GO:0003674,GO:0003824,GO:0005575,GO:0006950,GO:0007154,GO:0008150,GO:0008194,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015020,GO:0016020,GO:0016036,GO:0016740,GO:0016757,GO:0016758,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042594,GO:0050896,GO:0051716,GO:0071496 - 0.0000000000000000000000000000000000000000000001118 181.0
PJS3_k127_588145_6 polysaccharide deacetylase - - - 0.00000000000000000000000000000000001308 148.0
PJS3_k127_588145_7 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000006372 134.0
PJS3_k127_5894182_0 Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair K03580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004381 472.0
PJS3_k127_5894182_1 - - - - 0.00000000000000000000000005675 108.0
PJS3_k127_5907863_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1068.0
PJS3_k127_5907863_1 Acetyl-CoA hydrolase - - - 2.991e-250 793.0
PJS3_k127_5907863_2 GH3 auxin-responsive promoter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 563.0
PJS3_k127_5907863_3 Belongs to the UPF0061 (SELO) family K08997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006801 537.0
PJS3_k127_5907863_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005015 340.0
PJS3_k127_5907863_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003101 258.0
PJS3_k127_5907863_6 - - - - 0.000000000000000000000794 99.0
PJS3_k127_5907863_7 Domain of unknown function (DUF4282) - - - 0.0000000000000004758 79.0
PJS3_k127_5909215_0 COG0642 Signal transduction histidine kinase K20971 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 539.0
PJS3_k127_5909215_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 456.0
PJS3_k127_5909215_2 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007281 432.0
PJS3_k127_5909215_3 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 354.0
PJS3_k127_5909215_4 Na -dependent transporter K03453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 347.0
PJS3_k127_5909215_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 334.0
PJS3_k127_5909215_6 START domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009867 298.0
PJS3_k127_5909215_7 protein conserved in bacteria K09798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000711 289.0
PJS3_k127_5909215_8 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000002348 268.0
PJS3_k127_5909215_9 protein involved in outer membrane biogenesis K07289 - - 0.00000000000000000000000000000000005256 138.0
PJS3_k127_5933427_0 Domain of unknown function (DUF4336) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004154 303.0
PJS3_k127_5933427_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000006862 219.0
PJS3_k127_5933427_2 Group 1 truncated hemoglobin K06886 - - 0.000000000004607 66.0
PJS3_k127_5965113_0 type II secretion system protein K02454 - - 1.53e-306 949.0
PJS3_k127_5965113_1 phosphate transporter K03306 - - 2.76e-202 636.0
PJS3_k127_5965113_10 response to oxidative stress - - - 0.00000000000000000000000000000000000005881 148.0
PJS3_k127_5965113_11 of membrane protease K07340 - - 0.00000000000000000000000000000000003568 139.0
PJS3_k127_5965113_12 - - - - 0.000000000000000000000000000005142 130.0
PJS3_k127_5965113_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 492.0
PJS3_k127_5965113_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 434.0
PJS3_k127_5965113_4 COG0330 Membrane protease subunits stomatin prohibitin homologs - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004581 413.0
PJS3_k127_5965113_5 COG1392 Phosphate transport regulator (distant homolog of PhoU) K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 321.0
PJS3_k127_5965113_6 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001944 283.0
PJS3_k127_5965113_7 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008656 263.0
PJS3_k127_5965113_8 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002155 251.0
PJS3_k127_5965113_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000002023 225.0
PJS3_k127_6000230_0 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008776,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016741,GO:0016742,GO:0016772,GO:0016774,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 616.0
PJS3_k127_6000230_1 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000001884 225.0
PJS3_k127_6000230_2 DoxX K15977 - - 0.0000000000000000000000000000000000000000000000000005016 186.0
PJS3_k127_6011358_0 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000953 359.0
PJS3_k127_6011358_1 Belongs to the pseudouridine synthase RsuA family K06183 - 5.4.99.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000583 263.0
PJS3_k127_6011358_2 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K11890,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000001215 237.0
PJS3_k127_6022935_0 COG0277 FAD FMN-containing dehydrogenases K00803 - 2.5.1.26 1.274e-239 751.0
PJS3_k127_6022935_1 Glycerol-3-phosphate dehydrogenase K00111 - 1.1.5.3 4.233e-235 738.0
PJS3_k127_6022935_2 COG1070 Sugar (pentulose and hexulose) kinases - - - 1.007e-217 686.0
PJS3_k127_6022935_3 COG1473 Metal-dependent amidase aminoacylase carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 472.0
PJS3_k127_6023066_0 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 492.0
PJS3_k127_6023066_1 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000002526 214.0
PJS3_k127_6023066_2 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000001762 209.0
PJS3_k127_6031631_0 Cytochrome c-type biogenesis protein K02198 - - 4.586e-290 904.0
PJS3_k127_6031631_1 catalyzes a condensation reaction in fatty acid biosynthesis addition of an acyl acceptor of two carbons from malonyl-ACP K00647 - 2.3.1.41 2.129e-208 654.0
PJS3_k127_6031631_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 364.0
PJS3_k127_6031631_3 Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16 0, being most active on intermediate chain length K01716 - 4.2.1.59,5.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 289.0
PJS3_k127_6031631_4 Thiol disulfide interchange protein K02199 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004144 245.0
PJS3_k127_6031631_5 COG4235, Cytochrome c biogenesis factor K02200 - - 0.0000000000000000000000000000000000000000000000000000000000009258 222.0
PJS3_k127_6031631_6 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000000000002266 156.0
PJS3_k127_6031981_0 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 3.84e-234 728.0
PJS3_k127_6031981_1 Reduces the stability of FtsZ polymers in the presence of ATP K06916 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 527.0
PJS3_k127_6031981_2 hydrolase of the alpha beta superfamily K07018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 283.0
PJS3_k127_6031981_3 protein conserved in bacteria K09908 - - 0.0000000000000000000000000000000000000000001366 164.0
PJS3_k127_6037320_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 6.404e-244 759.0
PJS3_k127_6037320_1 Mg2 and Co2 transporter CorB - - - 4.456e-206 648.0
PJS3_k127_6037320_10 Fe-S protein K06938 - - 0.0000000000000003363 80.0
PJS3_k127_6037320_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 448.0
PJS3_k127_6037320_3 ADP-ribose pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 331.0
PJS3_k127_6037320_4 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 296.0
PJS3_k127_6037320_5 cytochrome C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008044 296.0
PJS3_k127_6037320_6 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001578 258.0
PJS3_k127_6037320_7 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.000000000000000000000000000000000000000000000000000000000000000000000000003736 256.0
PJS3_k127_6037320_8 protein conserved in bacteria K11022 - - 0.00000000000000000000000000000000000000001543 154.0
PJS3_k127_6037320_9 protein possibly involved in aromatic compounds catabolism - - - 0.00000000000000000000000000000000000004583 143.0
PJS3_k127_6048293_0 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007327 527.0
PJS3_k127_6048293_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 507.0
PJS3_k127_6048293_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008036 355.0
PJS3_k127_6048293_3 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000201 240.0
PJS3_k127_6048293_4 protein conserved in bacteria K05952 - - 0.00000000000000000001018 96.0
PJS3_k127_606845_0 Animal haem peroxidase - - - 6.737e-229 711.0
PJS3_k127_606845_1 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004959 414.0
PJS3_k127_606845_2 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 367.0
PJS3_k127_606845_3 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001381 271.0
PJS3_k127_606845_4 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000000000000000004862 226.0
PJS3_k127_606845_5 Domain of unknown function (DUF4279) - - - 0.00000000000000000000000000000000000000000000003309 173.0
PJS3_k127_606845_6 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015232,GO:0015886,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019897,GO:0019898,GO:0022857,GO:0031224,GO:0031234,GO:0032991,GO:0042623,GO:0043190,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:1901678,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.41 0.00000000000000000000000000000000000000000000003499 177.0
PJS3_k127_606845_7 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.000000000002197 68.0
PJS3_k127_606845_8 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.0001697 46.0
PJS3_k127_6081548_0 COG1960 Acyl-CoA dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 555.0
PJS3_k127_6081548_1 Iron permease FTR1 family K07243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 472.0
PJS3_k127_6081940_0 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K00523 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 365.0
PJS3_k127_6081940_2 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000001026 50.0
PJS3_k127_6126435_0 esterase of the alpha-beta hydrolase superfamily K07001 - - 8.434e-222 696.0
PJS3_k127_6126435_1 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.000000000000000000000000000000001083 134.0
PJS3_k127_6127454_0 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 353.0
PJS3_k127_6127454_1 COG0451 Nucleoside-diphosphate-sugar epimerases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000204 276.0
PJS3_k127_6130479_0 dienelactone hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006697 346.0
PJS3_k127_6130479_1 - - - - 0.0000000000000000000331 94.0
PJS3_k127_6130479_2 AhpC/TSA family - - - 0.00000000000000000008734 89.0
PJS3_k127_6163044_0 GMC oxidoreductase family - - - 1.981e-237 743.0
PJS3_k127_6163044_1 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000232 265.0
PJS3_k127_618251_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 2.182e-222 698.0
PJS3_k127_618251_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 280.0
PJS3_k127_618251_2 Peptidyl-prolyl cis-trans K03774 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000008322 222.0
PJS3_k127_618251_3 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000000007555 203.0
PJS3_k127_6184404_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 1.341e-298 928.0
PJS3_k127_6184404_1 protein conserved in bacteria - - - 4.282e-254 785.0
PJS3_k127_6184404_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004359 272.0
PJS3_k127_6187220_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0000000000000000000000000000000000000000000000000000000000000003697 220.0
PJS3_k127_6187220_1 phage Tail Collar - - - 0.000000000000000000000000000000000000000000001571 172.0
PJS3_k127_6192286_0 Sulfite reductase K00381 - 1.8.1.2 2.558e-284 880.0
PJS3_k127_6192286_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03314 - - 6.688e-236 742.0
PJS3_k127_6192286_10 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 453.0
PJS3_k127_6192286_11 peptidase K04774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 439.0
PJS3_k127_6192286_12 alcohol dehydrogenase K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 411.0
PJS3_k127_6192286_13 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 308.0
PJS3_k127_6192286_14 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008442 286.0
PJS3_k127_6192286_15 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding K03426 - 3.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001086 274.0
PJS3_k127_6192286_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001616 270.0
PJS3_k127_6192286_17 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000001326 241.0
PJS3_k127_6192286_18 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000005207 224.0
PJS3_k127_6192286_19 COG0500 SAM-dependent methyltransferases - - - 0.00000000000000000000000000000000000000000000000000000003561 205.0
PJS3_k127_6192286_2 ABC-type oligopeptide transport system, periplasmic component K13893 - - 2.184e-223 711.0
PJS3_k127_6192286_20 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000000000000006925 158.0
PJS3_k127_6192286_3 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 4.515e-215 683.0
PJS3_k127_6192286_4 Belongs to the ABC transporter superfamily K13896 - - 3.86e-198 630.0
PJS3_k127_6192286_5 Histidine kinase - - - 1.856e-197 631.0
PJS3_k127_6192286_6 With YejAEF is involved in resistance to microcin C K13894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 566.0
PJS3_k127_6192286_7 ABC transporter permease K13895 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005584 554.0
PJS3_k127_6192286_8 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008932,GO:0008933,GO:0009893,GO:0016020,GO:0016740,GO:0016757,GO:0019222,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043085,GO:0044093,GO:0044464,GO:0048518,GO:0050789,GO:0050790,GO:0051341,GO:0051353,GO:0061783,GO:0065007,GO:0065009 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008322 531.0
PJS3_k127_6192286_9 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008759 490.0
PJS3_k127_6192704_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1082.0
PJS3_k127_6192704_1 alcohol dehydrogenase K08325 - - 4.815e-199 625.0
PJS3_k127_6192704_10 to Hemin uptake protein hemP of Yersinia UniRef RepID HEMP_YEREN - - - 0.0000478 49.0
PJS3_k127_6192704_2 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 2.429e-195 617.0
PJS3_k127_6192704_3 2-hydroxychromene-2-carboxylate isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 542.0
PJS3_k127_6192704_4 Male sterility protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 394.0
PJS3_k127_6192704_5 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008203 243.0
PJS3_k127_6192704_6 membrane - - - 0.0000000000000000000000000000000000000000000000000005518 187.0
PJS3_k127_6192704_7 membrane - - - 0.0000000000000000000000000000000000000000000002004 171.0
PJS3_k127_6192704_8 transcriptional regulator K19591 - - 0.00000000000000000000000000000000000000000001015 165.0
PJS3_k127_6192704_9 iron ion transport K02016,K07225 - - 0.000000000000000000000000000000000000004615 160.0
PJS3_k127_6209999_0 of the RND superfamily K07003 - - 0.0 1155.0
PJS3_k127_6209999_1 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 493.0
PJS3_k127_6209999_2 protein related to plant photosystem II stability - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 355.0
PJS3_k127_6209999_3 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 347.0
PJS3_k127_6209999_4 During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes) K03812 - - 0.00000000000000000000001444 101.0
PJS3_k127_6209999_5 COG1073 Hydrolases of the alpha beta superfamily - - - 0.000154 50.0
PJS3_k127_6212219_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 462.0
PJS3_k127_6212219_1 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000004671 167.0
PJS3_k127_6225975_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.385e-286 886.0
PJS3_k127_6225975_1 COG3203 Outer membrane protein (porin) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009331 395.0
PJS3_k127_6225975_2 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009846 342.0
PJS3_k127_6225975_3 pyrophosphohydrolase K04765 - 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 319.0
PJS3_k127_6227274_0 COG0038 Chloride channel protein EriC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004375 586.0
PJS3_k127_6227274_1 hydroxymethylglutaryl-CoA reductase K00021 - 1.1.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 556.0
PJS3_k127_6227274_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000666 532.0
PJS3_k127_6227274_3 phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004538 299.0
PJS3_k127_6227274_4 membrane K08973 - - 0.00000000000000000000000000000000000000000000000000000000000000000002878 236.0
PJS3_k127_6227274_5 - - - - 0.00000000000000000000000000000000000000000000000000000000004548 214.0
PJS3_k127_6227274_6 COG1664 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000000000000000000000975 188.0
PJS3_k127_6227274_7 iron-sulfur cluster insertion protein erpA K15724 - - 0.0000000000000000000000000000000000000000000000003781 178.0
PJS3_k127_6227274_8 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000004061 125.0
PJS3_k127_6235502_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 1.604e-270 836.0
PJS3_k127_6235502_1 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 492.0
PJS3_k127_6235502_2 Acyl-CoA thioesterase K10805 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 427.0
PJS3_k127_6235502_3 Uracil-DNA glycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 292.0
PJS3_k127_6235502_4 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 0.000000000000000000000000000753 114.0
PJS3_k127_6235502_5 - - - - 0.000000006527 60.0
PJS3_k127_6246549_0 nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000002344 225.0
PJS3_k127_6246549_1 Glutaredoxin - - - 0.000000000000000000000000000000000000000000000000004788 184.0
PJS3_k127_6246549_2 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000001035 126.0
PJS3_k127_6246549_3 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.000000000000000000000000000004681 128.0
PJS3_k127_6246913_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 8.835e-301 931.0
PJS3_k127_6246913_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 1.36e-206 651.0
PJS3_k127_6246913_2 Sigma-70 region 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 516.0
PJS3_k127_6246913_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 439.0
PJS3_k127_6246913_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000000000000000000000000000009216 209.0
PJS3_k127_6246913_6 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000003099 162.0
PJS3_k127_6277169_0 Histidine kinase - - - 0.0 1553.0
PJS3_k127_6277169_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 7.094e-245 769.0
PJS3_k127_6277169_10 general secretion pathway protein K02459 - - 0.000000000000000000000000000000000000000000000003736 180.0
PJS3_k127_6277169_11 general secretion pathway protein K02458 - - 0.0000000000000000000000000000000283 131.0
PJS3_k127_6277169_12 Prokaryotic N-terminal methylation motif K02457 - - 0.00000000000000000000008058 106.0
PJS3_k127_6277169_13 - - - - 0.00000000008652 64.0
PJS3_k127_6277169_2 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 3.178e-239 749.0
PJS3_k127_6277169_3 general secretion pathway protein K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 560.0
PJS3_k127_6277169_4 chemotaxis K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 460.0
PJS3_k127_6277169_5 Sensory box protein response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 452.0
PJS3_k127_6277169_6 Response regulator containing a CheY-like receiver domain and an HD-GYP domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002429 249.0
PJS3_k127_6277169_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000002276 237.0
PJS3_k127_6277169_8 Protein-glutamate methylesterase K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000005491 213.0
PJS3_k127_6277169_9 secretion system protein G K02456 - - 0.000000000000000000000000000000000000000000000000000107 192.0
PJS3_k127_6288912_0 ATP-NAD kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003345 484.0
PJS3_k127_6288912_1 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 469.0
PJS3_k127_6288912_2 Belongs to the methyltransferase superfamily K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000001756 177.0
PJS3_k127_6289373_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 8.207e-203 637.0
PJS3_k127_6289373_1 protein conserved in bacteria K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 491.0
PJS3_k127_6289373_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 417.0
PJS3_k127_6289373_3 TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 383.0
PJS3_k127_6289373_4 DNA polymerase III subunit delta K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004032 338.0
PJS3_k127_6289373_5 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000008698 252.0
PJS3_k127_6289373_6 Pilus assembly protein PilZ K02676 - - 0.0000000000000000000000000000000000000000000000000000000000107 208.0
PJS3_k127_6289373_7 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K02619 - 4.1.3.38 0.00000000000000000000000000000000000000000000000000000102 204.0
PJS3_k127_6289373_8 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000008488 124.0
PJS3_k127_6300117_0 (ABC) transporter K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 506.0
PJS3_k127_6304942_0 homoserine dehydrogenase K00003 - 1.1.1.3 5.145e-216 677.0
PJS3_k127_6304942_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 572.0
PJS3_k127_6304942_2 COG0436 Aspartate tyrosine aromatic aminotransferase K12252,K14261 - 2.6.1.84 0.00000000000000000000000000000000000000000000000000000000001745 207.0
PJS3_k127_6306435_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 9.655e-206 646.0
PJS3_k127_6306435_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000006186 96.0
PJS3_k127_6308575_0 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 447.0
PJS3_k127_6308575_1 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 392.0
PJS3_k127_6308575_2 protein conserved in bacteria K09921 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 287.0
PJS3_k127_6317852_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.035e-288 893.0
PJS3_k127_6317852_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 4.342e-229 712.0
PJS3_k127_6317852_10 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000001188 237.0
PJS3_k127_6317852_11 colicin V production K03558 - - 0.0000000000000000000000000000000000000000000000000000000000000000004493 232.0
PJS3_k127_6317852_12 Sporulation related domain K03749 - - 0.000000000000000000000000001062 120.0
PJS3_k127_6317852_13 COG1305 Transglutaminase-like enzymes K22452 - 2.3.2.13 0.00000000000000000000000001675 113.0
PJS3_k127_6317852_2 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 1.309e-195 617.0
PJS3_k127_6317852_3 Tfp pilus assembly protein K08086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000477 629.0
PJS3_k127_6317852_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 505.0
PJS3_k127_6317852_5 ATPase, AAA K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 423.0
PJS3_k127_6317852_6 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 379.0
PJS3_k127_6317852_7 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 372.0
PJS3_k127_6317852_8 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 360.0
PJS3_k127_6317852_9 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 347.0
PJS3_k127_6323396_0 Competence protein - - - 0.00000000000000000000000000001721 121.0
PJS3_k127_6323396_1 Serine aminopeptidase, S33 - - - 0.00008264 50.0
PJS3_k127_6345318_0 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 502.0
PJS3_k127_6345318_1 Nad-dependent epimerase dehydratase K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005996 411.0
PJS3_k127_6345318_10 - - - - 0.0000000000000000000025 100.0
PJS3_k127_6345318_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000791 417.0
PJS3_k127_6345318_3 Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle K00564 - 2.1.1.172 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007907 316.0
PJS3_k127_6345318_4 Acetyltransferase (GNAT) domain K03824 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001422 245.0
PJS3_k127_6345318_5 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000005314 243.0
PJS3_k127_6345318_6 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000003264 216.0
PJS3_k127_6345318_7 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000001995 203.0
PJS3_k127_6345318_8 RDD family - - - 0.00000000000000000000000000000000001638 139.0
PJS3_k127_6345964_0 HTH-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 376.0
PJS3_k127_6345964_1 Rhomboid family - - - 0.000000000000000000000000000000000006879 136.0
PJS3_k127_6345964_2 Transposase K07483 - - 0.000000000000000000062 93.0
PJS3_k127_6345964_3 Rhomboid family - - - 0.0000000004168 60.0
PJS3_k127_6347881_0 ATPase with chaperone activity K07391 - - 5.222e-197 625.0
PJS3_k127_6347881_1 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 6.496e-197 619.0
PJS3_k127_6347881_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046 - 1.1.1.69 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 355.0
PJS3_k127_6362789_0 COG2831 Hemolysin activation secretion protein - - - 5.44e-276 858.0
PJS3_k127_6369488_0 COG0451 Nucleoside-diphosphate-sugar epimerases K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006711 404.0
PJS3_k127_6369488_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007091 327.0
PJS3_k127_6369488_2 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000009378 241.0
PJS3_k127_6369488_3 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000001247 161.0
PJS3_k127_6369488_4 SBF-like CPA transporter family (DUF4137) K03453 - - 0.0000003248 52.0
PJS3_k127_6374667_0 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 315.0
PJS3_k127_6374667_1 YecR-like lipoprotein - - - 0.0000000000000000000000000000000000000004463 151.0
PJS3_k127_6381890_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 374.0
PJS3_k127_6381890_1 Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair K03580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 363.0
PJS3_k127_6402097_0 ABC transporter ATP-binding protein - - - 1e-323 996.0
PJS3_k127_6402097_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 1.42e-232 725.0
PJS3_k127_6402097_10 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008293 259.0
PJS3_k127_6402097_11 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000000000001863 245.0
PJS3_k127_6402097_12 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000004685 244.0
PJS3_k127_6402097_13 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000000000000000000000000003043 217.0
PJS3_k127_6402097_14 Domain of unknown function (DUF4399) - - - 0.000000000000000000000000000000000000000000000000004013 184.0
PJS3_k127_6402097_15 Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a - - - 0.0000000000000000383 85.0
PJS3_k127_6402097_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 4.56e-227 709.0
PJS3_k127_6402097_3 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 542.0
PJS3_k127_6402097_4 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006552 491.0
PJS3_k127_6402097_5 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 478.0
PJS3_k127_6402097_6 transcriptional regulator K13633 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 419.0
PJS3_k127_6402097_7 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006535 387.0
PJS3_k127_6402097_8 Riboflavin synthase K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 340.0
PJS3_k127_6402097_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001115 265.0
PJS3_k127_6406277_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 2.105e-314 974.0
PJS3_k127_6406277_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 465.0
PJS3_k127_6406277_2 ATPase, AAA K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 353.0
PJS3_k127_6414783_0 Aminotransferase class-III K00836 - 2.6.1.76 9.071e-205 644.0
PJS3_k127_6414783_1 Creatinase/Prolidase N-terminal domain K01271 - 3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 598.0
PJS3_k127_6414783_2 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005231 528.0
PJS3_k127_6414783_3 Creatinase/Prolidase N-terminal domain K01271 - 3.4.13.9 0.00000000000000003204 81.0
PJS3_k127_6414783_4 Peptidase dimerisation domain - - - 0.00000000217 58.0
PJS3_k127_6416075_0 Belongs to the DNA photolyase family K01669 GO:0003674,GO:0003824,GO:0003904,GO:0003913,GO:0006139,GO:0006259,GO:0006281,GO:0006464,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0018298,GO:0019538,GO:0033554,GO:0034641,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360,GO:1901564 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005451 428.0
PJS3_k127_6416075_1 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 391.0
PJS3_k127_6416075_2 NAD FAD-binding protein K06954 - - 0.000000000000000000000000000000000000000000000000006524 183.0
PJS3_k127_6416075_3 helix_turn_helix, mercury resistance K22491 - - 0.0000000000000000000000000002338 126.0
PJS3_k127_642121_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 409.0
PJS3_k127_642121_1 Thioesterase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 286.0
PJS3_k127_642121_2 Protein of unknown function (DUF2846) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000415 279.0
PJS3_k127_642121_3 Protein of unknown function (DUF1289) K06938 - - 0.00000000000000000000000000000000000000000000000000000007369 201.0
PJS3_k127_642121_4 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.000000000000000000000000000000000000000001023 157.0
PJS3_k127_6421879_0 Methyltransferase domain - - - 0.0000000000000000001297 89.0
PJS3_k127_6421879_1 FecR protein - - - 0.000000000000000006526 97.0
PJS3_k127_6421879_2 COG0457 FOG TPR repeat - - - 0.000008518 51.0
PJS3_k127_6432692_0 efflux pump K18138 - - 0.0 1371.0
PJS3_k127_6432692_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001495 258.0
PJS3_k127_6432692_2 - - - - 0.000000000000000000000000000000000000000000000000000002339 193.0
PJS3_k127_6432692_3 Metal-dependent hydrolase K07043 - - 0.00000000000000000000000000000000000000000000002624 179.0
PJS3_k127_6432692_4 type III effector - - - 0.0000000000000000000000000000000001517 138.0
PJS3_k127_6433386_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 585.0
PJS3_k127_6433386_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 343.0
PJS3_k127_6433386_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 307.0
PJS3_k127_6433386_3 Preprotein translocase K03075 - - 0.00000000000000000000000000000000001695 139.0
PJS3_k127_6433386_4 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000002381 117.0
PJS3_k127_6433386_5 - - - - 0.0000000006406 59.0
PJS3_k127_6436832_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046,K00065 - 1.1.1.127,1.1.1.69 0.000000000000000000000000000000000000000000000000004032 183.0
PJS3_k127_6436832_1 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.00000000000000000000000000000003354 131.0
PJS3_k127_6436832_2 decarboxylase K01607 - 4.1.1.44 0.00000000000000000000003065 100.0
PJS3_k127_6440829_0 long-chain fatty acid transport protein - - - 5.651e-195 649.0
PJS3_k127_6442170_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004737 505.0
PJS3_k127_6442170_1 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 488.0
PJS3_k127_6442170_2 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 - 1.1.1.290 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 339.0
PJS3_k127_6442170_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003018 243.0
PJS3_k127_6450981_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 404.0
PJS3_k127_6450981_2 Belongs to the DnaA family. HdA subfamily K10763 - - 0.00000000000000000000000000000000000000000000000000000003561 205.0
PJS3_k127_6450981_3 protein conserved in bacteria K09938 - - 0.000000000000000000000000000000000004181 151.0
PJS3_k127_6453216_0 Protein of unknown function (DUF2894) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005178 433.0
PJS3_k127_6453216_1 EamA-like transporter family - - - 0.0000000000000008983 78.0
PJS3_k127_6461001_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 7.021e-197 617.0
PJS3_k127_6461001_1 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517 444.0
PJS3_k127_6461001_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 383.0
PJS3_k127_6461001_3 acetolactate synthase K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 286.0
PJS3_k127_6461001_4 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.000000000000000000000000000000000000000000000000000000000000000000005266 240.0
PJS3_k127_647411_0 flavoprotein involved in K transport - - - 1.291e-234 735.0
PJS3_k127_647411_1 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes K06132 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 538.0
PJS3_k127_647411_2 Predicted metal-dependent hydrolase K07044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 428.0
PJS3_k127_647411_3 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 351.0
PJS3_k127_647411_4 SpoU rRNA Methylase family - - - 0.00000000000000000000000000000000000000000000000000000000000008708 219.0
PJS3_k127_647411_5 - - - - 0.00000000000000000000000000000000000000000000000000001825 193.0
PJS3_k127_647411_6 Predicted metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000000001078 171.0
PJS3_k127_658104_0 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 1.426e-230 722.0
PJS3_k127_658104_1 Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (lauroyl)-lipid IV(A) K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008134 379.0
PJS3_k127_658104_2 Aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003892 351.0
PJS3_k127_658104_3 COG0578 Glycerol-3-phosphate dehydrogenase - - - 0.000000000000000000001488 95.0
PJS3_k127_677049_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1109.0
PJS3_k127_677049_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 5.756e-253 784.0
PJS3_k127_677049_2 Bacterial Ig-like domain - - - 4.199e-232 747.0
PJS3_k127_677049_3 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 1.43e-223 704.0
PJS3_k127_677049_4 Acyltransferase - GO:0000271,GO:0005575,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016020,GO:0016051,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 1.004e-204 655.0
PJS3_k127_677049_5 COG3555 Aspartyl asparaginyl beta-hydroxylase and related dioxygenases K12979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007577 425.0
PJS3_k127_677049_6 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000248 258.0
PJS3_k127_677049_7 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005881 258.0
PJS3_k127_677049_8 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000000000004969 203.0
PJS3_k127_677049_9 Protein of unknown function (DUF1244) K09948 - - 0.0000000000000000000000000000000000000189 147.0
PJS3_k127_688053_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 549.0
PJS3_k127_688053_1 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 457.0
PJS3_k127_688053_2 Helicase associated domain (HA2) Add an annotation K03579 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 361.0
PJS3_k127_688053_3 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 299.0
PJS3_k127_688053_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006442 279.0
PJS3_k127_688053_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003 240.0
PJS3_k127_688053_7 Belongs to the UPF0270 family K09898 - - 0.0000000000000001253 81.0
PJS3_k127_688800_0 Domain of unknown function (DUF4398) - - - 0.00000000000000000000000005248 113.0
PJS3_k127_691708_0 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009211 346.0
PJS3_k127_691708_1 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004369 269.0
PJS3_k127_691708_2 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.00000000000000000000000000000000000000000000000000000000003791 211.0
PJS3_k127_691708_3 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.0000000000000000000000000000000000000000000000000000000000623 215.0
PJS3_k127_691708_4 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.47 0.000000000000000000000000000000000000000000000006823 175.0
PJS3_k127_703308_0 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 2.132e-198 627.0
PJS3_k127_703308_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 532.0
PJS3_k127_703308_2 glycosyl transferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 364.0
PJS3_k127_703308_3 DsrE/DsrF-like family K07235 GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0019417,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055114,GO:0071704,GO:0090304,GO:0097163,GO:0140104,GO:1901360,GO:1902494,GO:1990228,GO:1990234 - 0.0000000000000000000000006239 108.0
PJS3_k127_704325_0 Domain of Unknown Function (DUF748) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 640.0
PJS3_k127_704325_1 Protein of unknown function (DUF2817) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 389.0
PJS3_k127_704325_2 COG0456 Acetyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 288.0
PJS3_k127_704325_3 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002312 278.0
PJS3_k127_704325_4 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000000000000000000000000002122 224.0
PJS3_k127_704325_5 PFAM YaeQ - - - 0.0000000000000000000000000000000000000001015 156.0
PJS3_k127_704325_6 - - - - 0.000000000008495 73.0
PJS3_k127_704325_7 - - - - 0.0000001822 61.0
PJS3_k127_713097_0 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006119 606.0
PJS3_k127_713097_1 FOG TPR repeat - - - 0.000000000000000000000000000000000002375 142.0
PJS3_k127_714126_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1548.0
PJS3_k127_714126_1 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 1.076e-222 695.0
PJS3_k127_714126_10 DUF167 K09131 - - 0.00000000000000000000000006021 111.0
PJS3_k127_714126_11 RDD family - - - 0.0000000000000000004725 93.0
PJS3_k127_714126_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 478.0
PJS3_k127_714126_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 439.0
PJS3_k127_714126_4 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 385.0
PJS3_k127_714126_5 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007695 302.0
PJS3_k127_714126_6 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 301.0
PJS3_k127_714126_7 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006292 287.0
PJS3_k127_714126_8 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001885 275.0
PJS3_k127_714126_9 Integral membrane protein K02221 - - 0.00000000000000000000000000000000000000000000000000000000000000000004125 235.0
PJS3_k127_730864_0 Belongs to the RimK family K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 507.0
PJS3_k127_730864_1 Deacylase K06987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 488.0
PJS3_k127_730864_2 protein conserved in archaea - - - 0.0000000000000000000005799 95.0
PJS3_k127_732173_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000001048 192.0
PJS3_k127_73219_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0 1075.0
PJS3_k127_73219_1 helicase K03722 - 3.6.4.12 3.081e-284 886.0
PJS3_k127_73219_2 Dyp-type peroxidase family K07223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 367.0
PJS3_k127_73219_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 354.0
PJS3_k127_73219_4 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000000000000000000000000000000000004238 237.0
PJS3_k127_73219_5 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.000000000000000000000000000000000000000000000000000000000000000002088 237.0
PJS3_k127_73219_6 Peptidase M22 K14742 - - 0.0000000000000000000000000000000000000000000000001264 187.0
PJS3_k127_73219_7 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019720,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061603,GO:0070568,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902757,GO:1902758 2.7.7.77 0.0000000000000000000000000000000001321 139.0
PJS3_k127_73219_8 - - - - 0.0006682 47.0
PJS3_k127_753636_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1043.0
PJS3_k127_753636_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 1.034e-227 711.0
PJS3_k127_753636_10 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002604 282.0
PJS3_k127_753636_11 L-2,4-diaminobutyric acid acetyltransferase K06718 - 2.3.1.178 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000748 273.0
PJS3_k127_753636_12 glutathione s-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000006727 266.0
PJS3_k127_753636_13 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000007486 264.0
PJS3_k127_753636_14 COG1846 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000000000000004943 235.0
PJS3_k127_753636_15 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.0000000000000000000000000000000000000000000000000000000000000000105 226.0
PJS3_k127_753636_16 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000279 239.0
PJS3_k127_753636_17 ABC 3 transport family K02075 - - 0.000000000000000000000000000000000000000000000000000000000000000101 231.0
PJS3_k127_753636_18 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000117 194.0
PJS3_k127_753636_19 Putative lumazine-binding - - - 0.000000000000000000000000000000000000000001143 160.0
PJS3_k127_753636_2 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 524.0
PJS3_k127_753636_20 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.00000000000000000000000001488 109.0
PJS3_k127_753636_21 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000379 96.0
PJS3_k127_753636_22 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000000001044 85.0
PJS3_k127_753636_3 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002888 519.0
PJS3_k127_753636_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 501.0
PJS3_k127_753636_5 phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 479.0
PJS3_k127_753636_6 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs K05541 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 430.0
PJS3_k127_753636_7 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 374.0
PJS3_k127_753636_8 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006473 361.0
PJS3_k127_753636_9 ABC-type metal ion transport system, periplasmic component surface adhesin K02077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 314.0
PJS3_k127_754839_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 3.56e-202 632.0
PJS3_k127_754839_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 546.0
PJS3_k127_754839_2 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 385.0
PJS3_k127_754839_3 EVE domain - - - 0.00000000000000000000000000000000000000000000187 169.0
PJS3_k127_756613_0 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00366,K00381 - 1.7.7.1,1.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 311.0
PJS3_k127_765961_0 Neutral/alkaline non-lysosomal ceramidase, N-terminal K12349 - 3.5.1.23 4.236e-221 706.0
PJS3_k127_765961_1 Acyl-CoA dehydrogenase, C-terminal domain K00253 - 1.3.8.4 2.459e-204 641.0
PJS3_k127_765961_2 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001588 263.0
PJS3_k127_765961_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000001649 258.0
PJS3_k127_765961_4 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000004685 239.0
PJS3_k127_765961_5 AAA domain - - - 0.000000000000000000000000000000000000000000007144 184.0
PJS3_k127_765961_7 - - - - 0.00000000000000000000000000000003282 137.0
PJS3_k127_765961_8 Bacterial protein of unknown function (DUF839) K07093 - - 0.0000004287 53.0
PJS3_k127_765961_9 - - - - 0.0005464 46.0
PJS3_k127_769413_0 chlorophyll binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005584 532.0
PJS3_k127_769413_1 peptidase S15 K01990 - - 0.000000001177 71.0
PJS3_k127_775553_0 COG0457 FOG TPR repeat - - - 0.0 1193.0
PJS3_k127_775636_0 Serine Threonine protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 574.0
PJS3_k127_775636_1 Nitrate nitrite transporter K02575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007811 467.0
PJS3_k127_775636_2 Domain of unknown function (DUF3332) - - - 0.000000000000000000000000000000000000000000000000000000003855 201.0
PJS3_k127_788376_0 TonB dependent receptor - - - 8.088e-209 672.0
PJS3_k127_788376_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 3.368e-195 612.0
PJS3_k127_788376_10 Transposase IS200 like - - - 0.0000000000000000008461 91.0
PJS3_k127_788376_11 Outer membrane efflux protein - - - 0.00000000002012 70.0
PJS3_k127_788376_2 Predicted metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008097 450.0
PJS3_k127_788376_3 2OG-Fe(II) oxygenase K07336 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 340.0
PJS3_k127_788376_4 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008414 268.0
PJS3_k127_788376_5 Flavodoxin K00380 - 1.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000314 245.0
PJS3_k127_788376_6 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.000000000000000000000000000000000000000000000006231 175.0
PJS3_k127_788376_7 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000008493 189.0
PJS3_k127_788376_8 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000989 118.0
PJS3_k127_788376_9 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000007824 110.0
PJS3_k127_797777_0 argininosuccinate lyase K01755 - 4.3.2.1 3.953e-261 808.0
PJS3_k127_797777_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 481.0
PJS3_k127_797777_10 TRL-like protein family - - - 0.0000000000000000000000000000000000000000001677 160.0
PJS3_k127_797777_2 signal transduction protein with a C-terminal ATPase domain K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007077 426.0
PJS3_k127_797777_3 SAM-dependent K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 394.0
PJS3_k127_797777_4 mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004061 376.0
PJS3_k127_797777_5 Response regulator of the LytR AlgR family K02477,K08083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008455 360.0
PJS3_k127_797777_6 biosynthesis protein HemY K02498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007198 344.0
PJS3_k127_797777_7 enzyme of heme biosynthesis K02496 - 2.1.1.107 0.000000000000000000000000000000000000000000000000000000000000000000000001562 257.0
PJS3_k127_797777_8 synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000001357 220.0
PJS3_k127_797777_9 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000426 196.0
PJS3_k127_799817_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 564.0
PJS3_k127_799817_1 COG3243 Poly(3-hydroxyalkanoate) synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 559.0
PJS3_k127_799817_2 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 426.0
PJS3_k127_799817_3 protein, possibly involved in aromatic compounds catabolism - - - 0.00000000000000000000000000000000000000000000000000000000000000000009921 232.0
PJS3_k127_799817_4 protein, possibly involved in aromatic compounds catabolism - - - 0.00000000000000000000000000000000000000000000000000000002593 201.0
PJS3_k127_799817_6 Protein of unknown function (DUF805) - - - 0.000000000000000000000000000000000001776 147.0
PJS3_k127_799817_7 Protein of unknown function (DUF1232) - - - 0.0000000000000000000002366 102.0
PJS3_k127_832273_0 phosphoserine phosphatase K01079 - 3.1.3.3 1.067e-211 663.0
PJS3_k127_832273_1 Putative diguanylate phosphodiesterase K21025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007022 502.0
PJS3_k127_832273_2 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 399.0
PJS3_k127_832273_3 Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 357.0
PJS3_k127_832273_4 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002099 264.0
PJS3_k127_832273_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000856 62.0
PJS3_k127_833915_0 Response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes K07712 - - 7.586e-257 797.0
PJS3_k127_833915_1 Histidine kinase K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 534.0
PJS3_k127_833915_2 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 333.0
PJS3_k127_833915_3 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106026,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000005194 176.0
PJS3_k127_833915_4 Protein of unknown function (DUF3015) - - - 0.0000000000000000000000000000000000000000001727 160.0
PJS3_k127_833915_5 - - - - 0.000000000000000001748 92.0
PJS3_k127_833915_6 penicillin-binding protein - - - 0.00000000000000001716 90.0
PJS3_k127_846941_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 2.978e-268 830.0
PJS3_k127_846941_1 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 437.0
PJS3_k127_846941_2 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 429.0
PJS3_k127_846941_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000604 351.0
PJS3_k127_846941_4 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000791 140.0
PJS3_k127_879376_0 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004502 316.0
PJS3_k127_879376_1 Redoxin - - - 0.00000000000006619 72.0
PJS3_k127_895018_0 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 2.81e-238 741.0
PJS3_k127_895018_1 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000004979 245.0
PJS3_k127_895018_2 RF-1 domain K15034 - - 0.0000000000000000000000000000000000000000000000000000004836 197.0
PJS3_k127_895018_3 L-2,4-diaminobutyric acid acetyltransferase K06718 - 2.3.1.178 0.000000000000000000000000000000000000000000001163 170.0
PJS3_k127_915249_0 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 419.0
PJS3_k127_915249_1 Belongs to the MtfA family K09933 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006508,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009889,GO:0010468,GO:0010556,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0043170,GO:0043433,GO:0044092,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0048519,GO:0050789,GO:0050794,GO:0051090,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0065009,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 407.0
PJS3_k127_915249_2 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003499 303.0
PJS3_k127_915249_3 COG0518 GMP synthase - Glutamine amidotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006065 281.0
PJS3_k127_915249_4 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008955,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0030203,GO:0034645,GO:0042546,GO:0043164,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000004753 233.0
PJS3_k127_915249_5 Type III secretion system lipoprotein chaperone (YscW) K09914 - - 0.0000000000000000000000000002312 125.0
PJS3_k127_918609_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 528.0
PJS3_k127_918609_1 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000000000000000000000000000004264 234.0
PJS3_k127_918609_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000000000000394 205.0
PJS3_k127_918609_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000001427 130.0
PJS3_k127_919493_0 Bacteriophage replication gene A protein (GPA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 416.0
PJS3_k127_919493_1 COG0433 Predicted ATPase K06915 - - 0.0000000000000000000000000000000000000000000000000004668 191.0
PJS3_k127_919493_2 - - - - 0.0000000000000000000000000000000000000000000007813 176.0
PJS3_k127_919493_4 - - - - 0.00001739 51.0
PJS3_k127_920819_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 5.923e-291 912.0
PJS3_k127_920819_1 Histidine kinase - - - 1.114e-227 731.0
PJS3_k127_920819_10 - - - - 0.0000000000000000000000000000000000001099 145.0
PJS3_k127_920819_11 Cysteine-rich CPXCG - - - 0.000000000000004291 76.0
PJS3_k127_920819_2 unusual protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008693 523.0
PJS3_k127_920819_3 AraC family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000824 460.0
PJS3_k127_920819_4 nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 318.0
PJS3_k127_920819_5 COG1024 Enoyl-CoA hydratase carnithine racemase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002792 260.0
PJS3_k127_920819_6 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) - - - 0.0000000000000000000000000000000000000000000000000000000000008332 219.0
PJS3_k127_920819_7 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.000000000000000000000000000000000000000000000000000006318 192.0
PJS3_k127_920819_9 Antibiotic biosynthesis monooxygenase - GO:0003674,GO:0003824 - 0.0000000000000000000000000000000000000000001455 162.0
PJS3_k127_929448_0 Histidine kinase - - - 0.0 1329.0
PJS3_k127_929448_1 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 1.834e-231 740.0
PJS3_k127_929448_10 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000005764 130.0
PJS3_k127_929448_11 MFS transporter - - - 0.0000000000000000000000009662 106.0
PJS3_k127_929448_12 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000001383 102.0
PJS3_k127_929448_13 Glutaredoxin - - - 0.0000000000000004783 83.0
PJS3_k127_929448_2 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 1.168e-216 679.0
PJS3_k127_929448_3 belongs to the carbohydrate kinase PfkB family K00847,K00892 - 2.7.1.4,2.7.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 482.0
PJS3_k127_929448_4 Aminotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000462 430.0
PJS3_k127_929448_5 Belongs to the SfsA family K06206 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005975,GO:0006355,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0044238,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0097159,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 336.0
PJS3_k127_929448_6 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 304.0
PJS3_k127_929448_7 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001135 282.0
PJS3_k127_929448_8 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001328 278.0
PJS3_k127_929448_9 Rieske 2Fe-2S - - - 0.000000000000000000000000000000000000000002408 162.0
PJS3_k127_932464_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 617.0
PJS3_k127_932464_1 Putative diguanylate phosphodiesterase K21025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 531.0
PJS3_k127_932464_2 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 391.0
PJS3_k127_932464_3 Elongation factor P--(R)-beta-lysine ligase K04568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 365.0
PJS3_k127_932464_4 Lysine 2,3-aminomutase YodO family protein K01843,K19810 GO:0003674,GO:0003824,GO:0005488,GO:0016853,GO:0016866,GO:0016869,GO:0048037,GO:0051536,GO:0051539,GO:0051540 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 347.0
PJS3_k127_932464_5 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007 340.0
PJS3_k127_932464_6 sister chromatid segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000003019 234.0
PJS3_k127_932464_7 TM2 domain - - - 0.000000000000547 81.0
PJS3_k127_932464_8 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.00000000267 57.0
PJS3_k127_932464_9 - - - - 0.000000315 63.0
PJS3_k127_934963_0 alginic acid biosynthetic process K01729 - 4.2.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 537.0
PJS3_k127_934963_1 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000005265 239.0
PJS3_k127_934963_2 MltA-interacting MipA family protein K07274 - - 0.00000000000000000000000000000006327 129.0
PJS3_k127_934963_3 polysaccharide catabolic process K01179,K01218 - 3.2.1.4,3.2.1.78 0.00000000000005275 86.0
PJS3_k127_934963_4 Trypsin-like serine protease K01337 - 3.4.21.50 0.000000000484 73.0
PJS3_k127_948570_0 COG1960 Acyl-CoA dehydrogenases K06445 - - 0.0 1112.0
PJS3_k127_948570_1 Belongs to the thiolase family K00632 GO:0003674,GO:0003824,GO:0003857,GO:0003988,GO:0004300,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016408,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0016829,GO:0016835,GO:0016836,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0033542,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 2.3.1.16 3.579e-206 648.0
PJS3_k127_959151_0 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 2.989e-278 881.0
PJS3_k127_959151_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001451 246.0
PJS3_k127_959151_2 COG3103 SH3 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000378 248.0
PJS3_k127_959151_3 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000003534 223.0
PJS3_k127_959151_4 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000001655 108.0
PJS3_k127_959151_5 Domain of unknown function (DUF4266) - - - 0.00000000000000000000002831 101.0
PJS3_k127_989009_0 Ammonium transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 608.0
PJS3_k127_989009_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 573.0
PJS3_k127_989009_10 - - - - 0.00000000000000000000000000000000000000002539 160.0
PJS3_k127_989009_11 Belongs to the sulfur carrier protein TusA family K04085 - - 0.000000000000000005764 85.0
PJS3_k127_989009_12 Bacterial SH3 domain homologues - - - 0.0000003261 59.0
PJS3_k127_989009_13 - - - - 0.000009166 53.0
PJS3_k127_989009_2 COG2230 Cyclopropane fatty acid synthase and related methyltransferases K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004982 504.0
PJS3_k127_989009_3 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 492.0
PJS3_k127_989009_4 Permease K03548 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 457.0
PJS3_k127_989009_5 NAD FAD-binding protein K06954 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 338.0
PJS3_k127_989009_6 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004534 277.0
PJS3_k127_989009_7 Protein of unknown function (DUF1365) K09701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003005 252.0
PJS3_k127_989009_8 glycine cleavage system K03567 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001407 243.0
PJS3_k127_989009_9 Peroxiredoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000002864 233.0
PJS3_k127_996468_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 522.0
PJS3_k127_996468_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 475.0
PJS3_k127_996468_2 transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000006111 199.0