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Overview

ID MAG03363
Name SHD1_bin.16
Sample SMP0082
Taxonomy
Kingdom Bacteria
Phylum Chloroflexota
Class Anaerolineae
Order Anaerolineales
Family Villigracilaceae
Genus Defluviilinea
Species
Assembly information
Completeness (%) 60.84
Contamination (%) 1.5
GC content (%) 53.0
N50 (bp) 5,091
Genome size (bp) 3,002,742

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2913

Gene name Description KEGG GOs EC E-value Score Sequence
SHD1_k127_1004242_0 PFAM Xylose isomerase domain protein TIM barrel K01805 - 5.3.1.5 5.517e-209 654.0
SHD1_k127_1004242_1 Belongs to the glycosyl hydrolase 8 (cellulase D) family K15531 - 3.2.1.156 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 612.0
SHD1_k127_1004242_2 Fibronectin type III-like domain K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006158 336.0
SHD1_k127_1004242_3 Belongs to the glycosyl hydrolase 43 family K01198,K01209 - 3.2.1.37,3.2.1.55 0.000000000000000000000000000000000004245 139.0
SHD1_k127_1016226_0 radical SAM domain protein - - - 8.549e-198 626.0
SHD1_k127_1016226_1 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004935 582.0
SHD1_k127_1016226_2 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 450.0
SHD1_k127_1016226_3 - - - - 0.00000000000000000000003702 113.0
SHD1_k127_1016226_4 - - - - 0.000958 45.0
SHD1_k127_1028230_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009052 432.0
SHD1_k127_1028230_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000872 319.0
SHD1_k127_1028230_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 317.0
SHD1_k127_1028230_3 generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000004334 270.0
SHD1_k127_1028230_4 PFAM membrane-flanked domain - - - 0.00000000000000000000000000000000000000000000000000002445 195.0
SHD1_k127_1028230_5 Putative regulatory protein - - - 0.00000000000000000000000000000000000006687 145.0
SHD1_k127_1028230_6 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.00000000000000001766 91.0
SHD1_k127_1028230_7 Protein of unknown function (DUF1706) - - - 0.00000000000166 74.0
SHD1_k127_1038795_0 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004707 499.0
SHD1_k127_1038795_1 succinate dehydrogenase K00241,K00247 - - 0.00000000000000000000000000000000003079 138.0
SHD1_k127_1038795_3 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000002113 89.0
SHD1_k127_1041347_0 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008873 294.0
SHD1_k127_1041347_1 ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - 0.00000000000000000000000000000000000000000000000001003 192.0
SHD1_k127_1041347_2 Ig-like domain from next to BRCA1 gene - - - 0.000000000000000000000000000000000000000000002717 181.0
SHD1_k127_1041347_3 sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000007056 139.0
SHD1_k127_1043910_0 ATP-dependent DNA helicase K03657 - 3.6.4.12 1.796e-229 741.0
SHD1_k127_1043910_1 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 469.0
SHD1_k127_1043910_2 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 450.0
SHD1_k127_1043910_3 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 304.0
SHD1_k127_1043910_4 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000000000000000000000000000000000000000000392 160.0
SHD1_k127_1053_0 Phage plasmid primase, P4 family K06919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 385.0
SHD1_k127_1053_1 helix_turn_helix, Lux Regulon K03556 - - 0.000000000000000000000000576 109.0
SHD1_k127_1053908_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 4.226e-318 983.0
SHD1_k127_1053908_1 Sugar (and other) transporter - - - 3.742e-201 633.0
SHD1_k127_1053908_2 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000000000000009794 196.0
SHD1_k127_1057770_0 PFAM Glycosyl transferase, group 1 - - - 1.318e-295 926.0
SHD1_k127_1057770_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004521 294.0
SHD1_k127_1057770_2 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000002651 217.0
SHD1_k127_1057770_3 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000000000003016 211.0
SHD1_k127_1057770_4 - - - - 0.00000000000000000000000000000000000000000000000001347 189.0
SHD1_k127_106605_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 1.599e-289 916.0
SHD1_k127_106605_1 Sugar (and other) transporter K08151,K08153 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 402.0
SHD1_k127_106605_10 pathogenesis K01447,K21471 - 3.5.1.28 0.0000000001036 73.0
SHD1_k127_106605_2 Trypsin-like peptidase domain K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009011 278.0
SHD1_k127_106605_3 RNase H K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000008456 237.0
SHD1_k127_106605_4 PFAM Isochorismatase - - - 0.00000000000000000000000000000000000000000000000005447 184.0
SHD1_k127_106605_5 Trypsin-like peptidase domain K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000852 175.0
SHD1_k127_106605_6 exo-alpha-(2->6)-sialidase activity K01186 GO:0001573,GO:0003674,GO:0003824,GO:0004308,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006672,GO:0006687,GO:0006689,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0016020,GO:0016042,GO:0016052,GO:0016787,GO:0016798,GO:0016997,GO:0019377,GO:0030149,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044424,GO:0044464,GO:0046466,GO:0046479,GO:0046514,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903509 3.2.1.18 0.000000000000000000000000000000000000000001208 171.0
SHD1_k127_106605_7 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000004332 153.0
SHD1_k127_106605_8 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000009906 143.0
SHD1_k127_106605_9 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.0000000000000000000000000002416 115.0
SHD1_k127_1066388_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001079 249.0
SHD1_k127_1066388_1 Peptidase dimerisation domain - - - 0.00000000000000000002306 93.0
SHD1_k127_1066388_2 DNA-templated transcription, initiation K03088 - - 0.00000000000000000002663 97.0
SHD1_k127_1066388_3 domain, Protein - - - 0.00000000000009972 85.0
SHD1_k127_1066388_4 - - - - 0.0002279 49.0
SHD1_k127_1066723_0 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002656 269.0
SHD1_k127_1066723_1 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000002981 145.0
SHD1_k127_1066723_2 polysaccharide catabolic process K01179 - 3.2.1.4 0.0000000592 63.0
SHD1_k127_1067817_0 Serine carboxypeptidase - - - 3.44e-203 642.0
SHD1_k127_1067817_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000001281 165.0
SHD1_k127_1067817_2 F420H(2)-dependent quinone reductase - - - 0.000000000000000000000001165 110.0
SHD1_k127_1067817_3 Peptidase family S58 K01266 - 3.4.11.19 0.000004617 50.0
SHD1_k127_1084063_0 aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 474.0
SHD1_k127_1084063_1 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 338.0
SHD1_k127_1084063_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 300.0
SHD1_k127_1084063_3 Putative ATP-binding cassette K01992 - - 0.00000000000000000000000000000000000000000000000000000000003117 227.0
SHD1_k127_1084063_4 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000001069 178.0
SHD1_k127_1084063_5 PFAM Helix-turn-helix, type 11 domain protein - - - 0.0000000000000000000000000000000000000001853 158.0
SHD1_k127_1084063_6 N-Acetylmuramoyl-L-alanine amidase - - - 0.00000000000001791 82.0
SHD1_k127_1084063_7 - - - - 0.0000000000000897 83.0
SHD1_k127_1084063_9 serine-type aminopeptidase activity K02030,K14475 - - 0.00007035 49.0
SHD1_k127_1086855_0 COGs COG4591 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005708 319.0
SHD1_k127_1086855_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000172 113.0
SHD1_k127_1087140_0 PFAM Amidohydrolase 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 582.0
SHD1_k127_1087140_1 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 357.0
SHD1_k127_1087140_2 PFAM PfkB domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 323.0
SHD1_k127_1087140_3 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003891 274.0
SHD1_k127_1087140_4 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000005912 185.0
SHD1_k127_1087140_5 PhoQ Sensor - - - 0.00000000007646 70.0
SHD1_k127_1094124_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 563.0
SHD1_k127_1094124_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 541.0
SHD1_k127_1094124_2 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K01921,K03589 GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0032506,GO:0042802,GO:0043093,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047 6.3.2.4 0.00000000000002536 76.0
SHD1_k127_1094124_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06996 - - 0.000000000007848 70.0
SHD1_k127_1100993_0 PFAM type II secretion system protein E K02283 - - 1.788e-211 660.0
SHD1_k127_1100993_1 PFAM type II secretion system protein K12511 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002803 376.0
SHD1_k127_1100993_2 PFAM type II secretion system protein K12510 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 358.0
SHD1_k127_1100993_3 PFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000009995 256.0
SHD1_k127_1100993_4 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000000000000000000000000000000000000000004521 204.0
SHD1_k127_1100993_5 competence protein - - - 0.0000000000000000000000000000000000000000000000000166 188.0
SHD1_k127_1100993_6 Enoyl-(Acyl carrier protein) reductase K03793 - 1.5.1.33 0.0000000000000000000000000000000000000000003442 169.0
SHD1_k127_1100993_7 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633,K07589 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008719,GO:0009987,GO:0016853,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0071704,GO:1901360,GO:1901564 1.13.11.81,4.1.2.25,5.1.99.7,5.1.99.8 0.000000000000000000000000004171 119.0
SHD1_k127_1100993_8 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity K00950,K13940 - 2.7.6.3,4.1.2.25 0.000000000000000000003074 100.0
SHD1_k127_1102886_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 544.0
SHD1_k127_1102886_1 peptidase M29 aminopeptidase II K19689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 434.0
SHD1_k127_1102886_2 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 354.0
SHD1_k127_1102886_3 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008784 254.0
SHD1_k127_1102886_4 PFAM Rhodanese-like domain - - - 0.00000000000000000001517 94.0
SHD1_k127_110954_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:1901564 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004415 464.0
SHD1_k127_110954_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 442.0
SHD1_k127_110954_2 Metallopeptidase family M24 K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 417.0
SHD1_k127_110954_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.00000000000000000000000000000002331 130.0
SHD1_k127_1111759_0 amino acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005934 541.0
SHD1_k127_1111759_1 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 479.0
SHD1_k127_1111759_10 PFAM Transglycosylase associated protein - - - 0.000000000000000000000000105 109.0
SHD1_k127_1111759_11 Squalene--hopene cyclase - - - 0.000144 50.0
SHD1_k127_1111759_2 Aminotransferase, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 463.0
SHD1_k127_1111759_3 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009242 421.0
SHD1_k127_1111759_4 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008465 372.0
SHD1_k127_1111759_5 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases K12972 - 1.1.1.79,1.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000002533 272.0
SHD1_k127_1111759_6 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000001585 200.0
SHD1_k127_1111759_7 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000007074 172.0
SHD1_k127_1111759_8 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.000000000000000000000000000000000000003601 157.0
SHD1_k127_1111759_9 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 4.3.2.2 0.00000000000000000000000000000000475 132.0
SHD1_k127_1113833_0 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000001499 209.0
SHD1_k127_1113833_1 PFAM membrane protein of K08972 - - 0.00000000000000000001784 95.0
SHD1_k127_1113833_2 - - - - 0.000000000000009593 76.0
SHD1_k127_1113833_3 glucan 1,4-alpha-glucosidase activity - - - 0.0004571 53.0
SHD1_k127_1148547_0 peptidase M24 K01271 - 3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000003363 248.0
SHD1_k127_1148547_1 Dehydrogenase reductase SDR family member - - - 0.00000000000000000000000000000000000000000000001827 180.0
SHD1_k127_1148547_2 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000195 162.0
SHD1_k127_1148547_3 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000003858 119.0
SHD1_k127_1148547_4 YdjC-like protein K03478 - 3.5.1.105 0.0000000000000000000001362 101.0
SHD1_k127_1149393_0 WD domain, G-beta repeat K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 347.0
SHD1_k127_1149393_2 S-adenosyl methyltransferase - - - 0.00000000001972 66.0
SHD1_k127_1180604_1 Biotin carboxylase C-terminal domain K01968 - 6.4.1.4 0.000000000000000000000007612 105.0
SHD1_k127_1180604_2 CoA carboxylase activity K01965,K02160 - 6.4.1.3 0.0000000000000003512 84.0
SHD1_k127_1184185_0 N-terminal domain of oxidoreductase - - - 0.0000000000000000000000000000000000000000000002822 171.0
SHD1_k127_1184185_1 PFAM regulatory protein TetR - - - 0.00000000000000000000000000006617 123.0
SHD1_k127_1184185_2 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.00000002371 60.0
SHD1_k127_1188356_0 Flavodoxin domain K00230 - 1.3.5.3 0.0000000000000000000000000000000000001671 148.0
SHD1_k127_1188356_1 antibiotic catabolic process - - - 0.000000000000000197 87.0
SHD1_k127_1188356_2 Response regulator, receiver K02487,K03407,K03413,K06596,K11526,K13490 GO:0003674,GO:0005488,GO:0005515,GO:0019904 2.7.13.3 0.0000000000001284 72.0
SHD1_k127_1188356_3 Source PGD - - - 0.0000000005485 66.0
SHD1_k127_1190375_0 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.0 1133.0
SHD1_k127_1190375_1 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009527 285.0
SHD1_k127_1190375_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000000000000003701 170.0
SHD1_k127_1190375_3 Cupin domain protein - - - 0.000008726 53.0
SHD1_k127_1190960_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 303.0
SHD1_k127_1190960_1 methyltransferase - - - 0.0000000000000000000000000000000000000006041 157.0
SHD1_k127_1190960_2 Dual specificity phosphatase, catalytic domain - - - 0.00000000000000000000000000000000000000105 154.0
SHD1_k127_1190960_3 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000009088 59.0
SHD1_k127_1190960_4 radical SAM domain protein - - - 0.00003087 48.0
SHD1_k127_1195858_0 ATPase associated with various cellular K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 418.0
SHD1_k127_1195858_1 Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. The complementary strand guanine functions in substrate recognition. Required for DNA damage lesion repair in stationary-phase cells K03649 - 3.2.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000007396 258.0
SHD1_k127_1195858_2 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950,K13940 - 2.7.6.3,4.1.2.25 0.0000000000000000000000000000000000000000003663 163.0
SHD1_k127_1195858_3 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000001352 160.0
SHD1_k127_1195858_4 Leukotriene A4 hydrolase, C-terminal - - - 0.000000000000000000000000000000000004209 141.0
SHD1_k127_1195858_5 Domain of unknown function (DUF4350) - - - 0.000000000000000000000000000000000005025 151.0
SHD1_k127_1195858_6 Domain of unknown function (DUF4129) - - - 0.0000000000000000000000000000004099 136.0
SHD1_k127_1195858_7 pathogenesis K02417,K02519 - - 0.000000000000000000000005103 114.0
SHD1_k127_1195858_8 Leukotriene A-4 hydrolase K01254 GO:0003674,GO:0003824,GO:0004177,GO:0004301,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006629,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0009056,GO:0009987,GO:0016787,GO:0016801,GO:0016803,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.3.2.6 0.000000000009766 72.0
SHD1_k127_1196416_0 4-Hydroxyphenylpyruvate dioxygenase K00457,K16421 GO:0003674,GO:0003824,GO:0003868,GO:0006082,GO:0006520,GO:0006570,GO:0006572,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0051213,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.27,1.13.11.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 578.0
SHD1_k127_1196416_1 Sodium:sulfate symporter transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001013 284.0
SHD1_k127_1196416_2 Tellurite resistance protein TehB - - - 0.0000000000000000000000000000000000000000000000000000000000002804 218.0
SHD1_k127_1196416_3 Aminoacyl-tRNA editing domain - - - 0.000000000000000000000000000000000000000000000000000009534 193.0
SHD1_k127_1196416_4 maltose O-acetyltransferase activity - - - 0.00000000000000000000000000000000000000000000000007404 186.0
SHD1_k127_1196416_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000005027 147.0
SHD1_k127_1196416_6 phosphatase (DUF442) - - - 0.00000000000000000000000000000000006566 138.0
SHD1_k127_1196416_7 - - - - 0.000002413 56.0
SHD1_k127_1197868_0 Two component transcriptional regulator, winged helix family K07667,K07668 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 398.0
SHD1_k127_1197868_1 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 340.0
SHD1_k127_1197868_2 PFAM Forkhead-associated protein - - - 0.00000000000000000000000000000000000000000000004596 175.0
SHD1_k127_1197868_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000001347 143.0
SHD1_k127_1197868_4 - - - - 0.0000000000000000000001589 99.0
SHD1_k127_1197868_5 PFAM von Willebrand factor type A K07114 - - 0.0000001728 54.0
SHD1_k127_1211013_0 Phosphoesterase family - - - 0.0000000000000000000000000000000000000000000000000000000000008083 222.0
SHD1_k127_1211013_1 Methyltransferase K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000003132 161.0
SHD1_k127_1211013_2 Protein tyrosine kinase - - - 0.0000000000000000000000008586 111.0
SHD1_k127_1211013_3 positive regulation of macromolecule biosynthetic process K03973 - - 0.0003508 50.0
SHD1_k127_1211013_4 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.0005346 44.0
SHD1_k127_1212208_0 succinyl-diaminopimelate desuccinylase activity K01439 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009014,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0032153,GO:0042802,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0046872,GO:0046914,GO:0050897,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.1.18 0.0 1157.0
SHD1_k127_1212208_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000005209 199.0
SHD1_k127_1212208_2 NB-ARC domain - - - 0.000000000000000009072 93.0
SHD1_k127_1219163_0 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 320.0
SHD1_k127_1219163_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000162 257.0
SHD1_k127_1219163_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000007356 145.0
SHD1_k127_1219163_3 Anti-sigma-K factor rskA - - - 0.0000000000000000000000003657 114.0
SHD1_k127_1219163_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000006197 85.0
SHD1_k127_1225931_0 ATP-dependent transcriptional regulator, MalT-like, LuxR family K03556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004361 447.0
SHD1_k127_1225931_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001 248.0
SHD1_k127_1225931_2 - - - - 0.000000000002846 72.0
SHD1_k127_1239883_0 ATPase AAA-2 domain protein K03696 - - 3.505e-234 733.0
SHD1_k127_1239883_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 484.0
SHD1_k127_1239883_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 323.0
SHD1_k127_1239883_3 Hydrolase Family 16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007129 308.0
SHD1_k127_1239883_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001012 281.0
SHD1_k127_1239883_5 membrane - - - 0.0000000000000000000000000000000000000000000000000000000008305 212.0
SHD1_k127_1239883_6 transcriptional regulator, Rrf2 family - - - 0.00000000000000000000000000000000000000000000000000000001895 200.0
SHD1_k127_1244644_0 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 333.0
SHD1_k127_1244644_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000004176 183.0
SHD1_k127_1244644_2 PFAM response regulator receiver K07664 - - 0.0000000000000004267 82.0
SHD1_k127_1244644_3 Double zinc ribbon - - - 0.00000000000001263 77.0
SHD1_k127_1246174_0 Bacterial extracellular solute-binding protein K02055 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 398.0
SHD1_k127_1246174_1 transposition - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001084 284.0
SHD1_k127_125047_0 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 309.0
SHD1_k127_125047_1 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005779 282.0
SHD1_k127_125047_2 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000002368 173.0
SHD1_k127_125047_3 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.0000000000000000000001459 99.0
SHD1_k127_125047_4 - - - - 0.00000000000000000341 88.0
SHD1_k127_1251025_0 Tetratricopeptide TPR_2 repeat protein - - - 6.23e-322 1020.0
SHD1_k127_1251025_1 Uncharacterized membrane protein (DUF2298) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 329.0
SHD1_k127_1251025_2 Protein of unknown function (DUF952) K00799,K01560,K21420 - 2.3.2.29,2.5.1.18,3.8.1.2 0.00000000000000000000000002606 112.0
SHD1_k127_1254355_0 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 465.0
SHD1_k127_1254355_1 metalloendopeptidase activity K08602 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009281 402.0
SHD1_k127_1254355_2 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 360.0
SHD1_k127_1259145_0 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000000000000000000000006619 193.0
SHD1_k127_1259145_1 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000000000000002805 178.0
SHD1_k127_1259145_2 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000001588 149.0
SHD1_k127_1259145_3 Response regulator receiver K11443 - - 0.0000000000000000000006917 102.0
SHD1_k127_1259145_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000005764 85.0
SHD1_k127_1259145_5 Peptidoglycan-binding LysM - - - 0.00000000000001747 74.0
SHD1_k127_125993_0 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 586.0
SHD1_k127_125993_1 CHASE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 413.0
SHD1_k127_125993_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001062 263.0
SHD1_k127_125993_3 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000003195 218.0
SHD1_k127_125993_4 PAS fold - - - 0.000000000000000000000000008483 111.0
SHD1_k127_127117_0 NB-ARC domain - - - 0.00000000000000000000000000000000000000000000000000000000000007349 239.0
SHD1_k127_127117_1 COGs COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000001844 215.0
SHD1_k127_127117_2 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000003238 183.0
SHD1_k127_127117_3 - - - - 0.000000000000000000000000000567 123.0
SHD1_k127_127117_4 TIR domain - - - 0.000000000000000000000000008245 115.0
SHD1_k127_127117_5 - - - - 0.000000000001098 79.0
SHD1_k127_127117_6 regulatory protein LuxR - - - 0.0000005089 58.0
SHD1_k127_127672_0 Glycosyl transferase, family 2 K00786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 361.0
SHD1_k127_127672_1 Glycosyl transferase, family 2 K00786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008137 280.0
SHD1_k127_127672_2 PFAM NAD-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001201 252.0
SHD1_k127_127672_3 O-Antigen ligase - - - 0.0000000000000000002322 103.0
SHD1_k127_127672_4 - - - - 0.0000000000000001041 89.0
SHD1_k127_127672_5 protein involved in exopolysaccharide biosynthesis - - - 0.0002762 51.0
SHD1_k127_1287793_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006898 334.0
SHD1_k127_1287793_1 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K11618 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007883 281.0
SHD1_k127_1287793_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000001499 232.0
SHD1_k127_1287793_3 Uncharacterized protein conserved in bacteria (DUF2087) - - - 0.00000000000000000000000000000000000000000000000000000000663 203.0
SHD1_k127_1287793_4 Uncharacterized protein conserved in bacteria (DUF2087) - - - 0.000000000000000000000000000000000000000000000000009361 186.0
SHD1_k127_1287793_5 Two component regulator propeller K17763 - - 0.00000000000000000000000000000000007471 151.0
SHD1_k127_1300276_0 Myo-inositol-1-phosphate synthase, GAPDH domain protein K01858 - 5.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 603.0
SHD1_k127_1300276_1 N-4 methylation of cytosine K00590 - 2.1.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 471.0
SHD1_k127_1300276_2 polysaccharide deacetylase K01406 - 3.4.24.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009494 335.0
SHD1_k127_1300276_3 PhoQ Sensor - - - 0.000000000000000000008757 104.0
SHD1_k127_1300276_4 Ig-like domain from next to BRCA1 gene - - - 0.00000000000000000004609 103.0
SHD1_k127_1300276_5 Ig-like domain from next to BRCA1 gene - - - 0.00000000000000005084 93.0
SHD1_k127_1300276_6 Cysteine-rich secretory protein family - - - 0.00000000000005232 84.0
SHD1_k127_1300276_7 Histidine kinase - - - 0.00000000000005867 73.0
SHD1_k127_1300276_8 Cysteine-rich secretory protein family - - - 0.0000000344 65.0
SHD1_k127_1308330_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000002779 107.0
SHD1_k127_1308330_1 Protein of unknown function DUF72 - - - 0.00000000000000000001305 96.0
SHD1_k127_1332389_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 2.637e-317 987.0
SHD1_k127_1332389_1 xanthine phosphoribosyltransferase activity K00769,K07101 - 2.4.2.22 0.00000000000000000000000000000000000000000000000000000004462 201.0
SHD1_k127_1332389_2 - - - - 0.0000000000000000000000000000000000000000000006868 173.0
SHD1_k127_1332389_3 PFAM binding-protein-dependent transport systems inner membrane component K02026 - - 0.000000000000625 80.0
SHD1_k127_1332389_4 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000002439 53.0
SHD1_k127_1332389_5 deoxyhypusine monooxygenase activity - - - 0.000009125 57.0
SHD1_k127_13345_0 Belongs to the glycosyl hydrolase family 6 K19668 - 3.2.1.91 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005449 617.0
SHD1_k127_13345_1 polysaccharide catabolic process K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 552.0
SHD1_k127_13345_2 Molecular chaperone. Has ATPase activity K04079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 444.0
SHD1_k127_13345_3 cellulase activity K01181,K01218 - 3.2.1.78,3.2.1.8 0.000000000000003871 86.0
SHD1_k127_1338719_0 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008648 541.0
SHD1_k127_1338719_1 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001228 264.0
SHD1_k127_1338719_2 - - - - 0.00000000000000000000000000000001249 134.0
SHD1_k127_1338719_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000363 129.0
SHD1_k127_1338719_4 - - - - 0.000000000000000000004339 100.0
SHD1_k127_1338719_5 Cytochrome c554 and c-prime - - - 0.0000000000000438 86.0
SHD1_k127_1338719_6 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000002478 79.0
SHD1_k127_1338719_7 PFAM Cyclic nucleotide-binding domain - - - 0.000000001292 65.0
SHD1_k127_1359820_0 PFAM Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 395.0
SHD1_k127_1359820_1 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 316.0
SHD1_k127_1359820_2 Flavodoxin domain K00230 - 1.3.5.3 0.00000000000000000000000000005604 122.0
SHD1_k127_1359820_3 Isopenicillin N epimerase K04127 - 5.1.1.17 0.000006057 49.0
SHD1_k127_1368373_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 484.0
SHD1_k127_1368373_1 Major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 478.0
SHD1_k127_1368373_2 HEPN domain - - - 0.000000000000000000000000000001986 124.0
SHD1_k127_1368373_3 toxin-antitoxin pair type II binding - - - 0.000000000000000000002888 96.0
SHD1_k127_1368373_4 Ig-like domain from next to BRCA1 gene - - - 0.000000000000000004172 93.0
SHD1_k127_1368373_5 Nucleotidyltransferase domain - - - 0.0000000006118 65.0
SHD1_k127_1379388_0 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 481.0
SHD1_k127_1379388_1 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004781 320.0
SHD1_k127_1379388_2 Threonyl alanyl tRNA synthetase SAD K07050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 311.0
SHD1_k127_1379388_3 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000009355 231.0
SHD1_k127_1379388_4 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000000004974 153.0
SHD1_k127_1379388_5 TIGRFAM acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.0000000000000000000000000000000000000001924 158.0
SHD1_k127_1379388_7 ATPases associated with a variety of cellular activities K01990 - - 0.00000002429 57.0
SHD1_k127_1399423_0 Glycosyl hydrolase 36 superfamily, catalytic domain K00702 - 2.4.1.20 1.494e-236 744.0
SHD1_k127_1399423_1 PFAM glycoside hydrolase, family 3 domain protein K05349 - 3.2.1.21 2.108e-201 646.0
SHD1_k127_1399423_2 PFAM ABC transporter related K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002869 263.0
SHD1_k127_1422717_0 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 601.0
SHD1_k127_1422717_1 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 386.0
SHD1_k127_1422717_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000008062 96.0
SHD1_k127_1437349_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 1.036e-197 625.0
SHD1_k127_1437349_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005123 573.0
SHD1_k127_1437349_2 protein histidine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008759 391.0
SHD1_k127_1437349_3 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 300.0
SHD1_k127_1442499_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001634 244.0
SHD1_k127_1442499_1 beta-1,4-mannooligosaccharide phosphorylase - - - 0.00000000000000000000000000000000000000000001887 162.0
SHD1_k127_1442499_2 Transcription factor K07736 - - 0.000000001889 65.0
SHD1_k127_1455556_0 PFAM cytoplasmic peptidoglycan synthetase domain protein K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 440.0
SHD1_k127_1455556_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009487 389.0
SHD1_k127_1455556_2 bis(5'-adenosyl)-triphosphatase activity - - - 0.000000000000000000000000002472 115.0
SHD1_k127_1455556_3 Protein of unknown function (DUF503) K09764 - - 0.00000000000000000000000001799 112.0
SHD1_k127_1456936_0 Spermidine synthase tetramerisation domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 416.0
SHD1_k127_1456936_1 PFAM Major Facilitator Superfamily K08223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008957 346.0
SHD1_k127_1456936_2 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000000000000000000000000000007092 183.0
SHD1_k127_1456936_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000001583 111.0
SHD1_k127_1467987_0 PFAM Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 389.0
SHD1_k127_1467987_1 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 287.0
SHD1_k127_1467987_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000007116 225.0
SHD1_k127_1467987_3 Blue (Type 1) copper domain protein - - - 0.0000000000000000000000000000000008248 134.0
SHD1_k127_1472472_0 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001943 274.0
SHD1_k127_1472472_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000002351 250.0
SHD1_k127_1472472_2 Glycosyltransferase family 87 - - - 0.00000003758 65.0
SHD1_k127_1472897_0 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 426.0
SHD1_k127_1472897_1 TIGRFAM phosphate binding protein K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 383.0
SHD1_k127_1472897_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 369.0
SHD1_k127_1472897_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015114,GO:0015318,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0035435,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:0099133 3.6.3.27 0.0000000000000000000000000000000000001642 143.0
SHD1_k127_1472897_4 COGs COG1392 Phosphate transport regulator (distant homolog of PhoU) K07220 - - 0.000000000000000000749 93.0
SHD1_k127_1476539_0 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 327.0
SHD1_k127_1476539_1 lipid binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001414 260.0
SHD1_k127_1476539_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000001369 209.0
SHD1_k127_1476539_3 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000000000000000000003494 185.0
SHD1_k127_1476539_4 - - - - 0.000000006021 65.0
SHD1_k127_1493322_0 phosphorelay sensor kinase activity K01768,K02482,K02584,K07673,K10819 - 2.7.13.3,4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 391.0
SHD1_k127_1493322_1 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 330.0
SHD1_k127_1493322_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 323.0
SHD1_k127_1493322_3 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001822 259.0
SHD1_k127_1493322_4 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003187 252.0
SHD1_k127_1493322_5 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003379 239.0
SHD1_k127_1493322_6 cheY-homologous receiver domain K11443 - - 0.0000000000000000000000000000000000000000001896 162.0
SHD1_k127_1513224_0 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 438.0
SHD1_k127_1513224_1 Integral membrane protein TerC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006683 287.0
SHD1_k127_1513224_2 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000000000000426 194.0
SHD1_k127_1513224_3 Phosphodiester glycosidase - - - 0.000000000000000000000000001305 117.0
SHD1_k127_1513224_4 TIR domain - - - 0.0000000000000000000000002192 113.0
SHD1_k127_1522687_0 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000002167 193.0
SHD1_k127_1522687_1 Leucine carboxyl methyltransferase - - - 0.000000000000000000000000006816 120.0
SHD1_k127_1522687_2 - - - - 0.0007057 48.0
SHD1_k127_1536934_0 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008784 357.0
SHD1_k127_1536934_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001305 276.0
SHD1_k127_1536934_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002024 276.0
SHD1_k127_1536934_3 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000003747 176.0
SHD1_k127_1536934_4 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000001253 70.0
SHD1_k127_1544791_0 Periplasmic copper-binding protein (NosD) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008218 322.0
SHD1_k127_1544791_2 response regulator K07669 - - 0.0000000000000000000000000000000000000000000000000000004919 201.0
SHD1_k127_1544791_3 histidine kinase dimerisation and phosphoacceptor region - - - 0.00000000000000000000000000000000000002699 165.0
SHD1_k127_1546473_0 PFAM alanine racemase domain protein K20757 - 4.3.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 473.0
SHD1_k127_1546473_1 PFAM Peptidase M19, renal dipeptidase K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 377.0
SHD1_k127_1546473_2 PFAM TrkA-N domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007419 336.0
SHD1_k127_1546473_3 PFAM Stage II sporulation E family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004962 293.0
SHD1_k127_1546473_4 Endoribonuclease L-PSP K09022 GO:0003674,GO:0003824,GO:0016787,GO:0019239 3.5.99.10 0.000000000000000000000000000000000415 135.0
SHD1_k127_1546473_5 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis - - - 0.000000000000000000000000000001074 125.0
SHD1_k127_1546473_6 Endonuclease containing a URI domain K07461 - - 0.00000000000000000005006 91.0
SHD1_k127_154880_0 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 1.97e-203 642.0
SHD1_k127_154880_1 FAD binding domain K00481 - 1.14.13.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 506.0
SHD1_k127_154880_2 PFAM Aldehyde dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 476.0
SHD1_k127_154880_3 Molybdopterin oxidoreductase, Fe4S4 K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 484.0
SHD1_k127_154880_4 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007181 315.0
SHD1_k127_154880_5 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335,K18331,K22339 - 1.12.1.3,1.17.1.11,1.6.5.3 0.000000000000000000000000000001148 124.0
SHD1_k127_154880_6 binding domain protein K07138 - - 0.000003318 52.0
SHD1_k127_1555815_0 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 396.0
SHD1_k127_1555815_1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 303.0
SHD1_k127_1555815_2 Coenzyme F420-reducing hydrogenase, gamma subunit - - - 0.0000000000000000000000000000000000000000000000000000002592 197.0
SHD1_k127_1555815_3 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000001885 97.0
SHD1_k127_1555815_4 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.00000000001794 66.0
SHD1_k127_1558135_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 390.0
SHD1_k127_1558135_1 modification enzyme, MiaB family K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 306.0
SHD1_k127_1558135_2 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005004 290.0
SHD1_k127_1571565_0 elongation factor Tu domain 2 protein K02355 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000315 284.0
SHD1_k127_1571565_1 Pyridoxal-phosphate dependent enzyme K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000175 274.0
SHD1_k127_1571565_2 ThiS family K03636 - - 0.000000000000006968 78.0
SHD1_k127_1580119_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 2.491e-230 720.0
SHD1_k127_1580119_1 Belongs to the FPP GGPP synthase family K00805,K02523 - 2.5.1.30,2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 370.0
SHD1_k127_1580119_2 TIGRFAM hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000151 239.0
SHD1_k127_1580119_3 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000003628 166.0
SHD1_k127_1580119_4 - - - - 0.00000000000000000000000000000000000004365 150.0
SHD1_k127_1580119_5 PFAM deoxynucleoside kinase - - - 0.0000000000000000000000000002965 116.0
SHD1_k127_1580119_6 - - - - 0.000001989 54.0
SHD1_k127_1581567_0 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000004508 232.0
SHD1_k127_1581567_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000001419 190.0
SHD1_k127_1581567_2 Septum formation initiator - - - 0.0000000000006471 73.0
SHD1_k127_1581567_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000001255 62.0
SHD1_k127_1582828_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 4.668e-201 636.0
SHD1_k127_1582828_1 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 405.0
SHD1_k127_1582828_2 Two component transcriptional regulator, winged helix family K07669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 377.0
SHD1_k127_1582828_3 serine-type peptidase activity - - - 0.000000000000000000000000000000000000000000000000000001098 201.0
SHD1_k127_1586366_0 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 323.0
SHD1_k127_1586366_1 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000022 286.0
SHD1_k127_1586366_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003754 293.0
SHD1_k127_1586366_3 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002316 250.0
SHD1_k127_1586366_4 PAS domain - - - 0.00000000000000000000000000000000000006019 144.0
SHD1_k127_1591629_0 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004911 460.0
SHD1_k127_1591629_1 Cellulose biosynthesis protein BcsQ K02282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 319.0
SHD1_k127_1591629_2 COGs COG1399 metal-binding possibly nucleic acid-binding protein K07040 - - 0.00000001747 56.0
SHD1_k127_1592038_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 454.0
SHD1_k127_1592038_1 Leucine carboxyl methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 390.0
SHD1_k127_1592038_2 carboxylic ester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 329.0
SHD1_k127_1592038_3 Cupin 2, conserved barrel domain protein K21700 - - 0.00000000000000000000000000000000000000000000000000000000000001201 217.0
SHD1_k127_1592038_4 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.00000000000000000000000000000000000000000000000361 183.0
SHD1_k127_1592038_5 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000003165 173.0
SHD1_k127_1592038_6 Transglutaminase-like superfamily - - - 0.0000000000000000000418 101.0
SHD1_k127_1598126_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1047.0
SHD1_k127_1598126_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001062 286.0
SHD1_k127_1598126_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001082 285.0
SHD1_k127_1598126_3 Peptidase family M41 - - - 0.00000000000000000000000000000000000000000000000000001628 203.0
SHD1_k127_1598126_4 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000001203 162.0
SHD1_k127_1598126_5 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000004685 113.0
SHD1_k127_1605098_0 SMART PDZ DHR GLGF domain protein K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007335 264.0
SHD1_k127_1605098_1 PBS lyase HEAT domain protein repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001716 248.0
SHD1_k127_1605098_2 LysM domain - - - 0.00000000000000000000000000000000000000000000001412 182.0
SHD1_k127_1605098_3 PFAM Auxin Efflux Carrier K07088 - - 0.000000000000000000000000000000000000002512 158.0
SHD1_k127_1605098_4 PFAM Histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000000000009076 143.0
SHD1_k127_1605098_5 Polysaccharide biosynthesis protein - - - 0.00000000000000000000001592 101.0
SHD1_k127_1618207_0 PFAM aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008201 336.0
SHD1_k127_1618207_1 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000002376 188.0
SHD1_k127_1618207_2 Helix-turn-helix type 11 domain protein - - - 0.0000000000000000000000000000000004418 133.0
SHD1_k127_1618207_3 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000001484 131.0
SHD1_k127_1618207_4 PFAM helix-turn-helix- domain containing protein, AraC type K13653 - - 0.000000000000000000000001162 109.0
SHD1_k127_1620927_0 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 5.265e-238 746.0
SHD1_k127_1620927_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 399.0
SHD1_k127_1620927_2 glycerophosphodiester transmembrane transport K02026,K10234 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 297.0
SHD1_k127_1620927_3 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002732 279.0
SHD1_k127_1620927_4 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 0.0000000000000000000000000000000000000000003311 159.0
SHD1_k127_1620927_5 GGDEF domain - - - 0.000000947 59.0
SHD1_k127_1624063_0 histidine kinase A domain protein - - - 0.0 1297.0
SHD1_k127_1624063_1 Hexapeptide repeat of succinyl-transferase - - - 8.613e-199 626.0
SHD1_k127_1624063_2 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 525.0
SHD1_k127_1624063_3 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008951 456.0
SHD1_k127_1624063_4 Shikimate quinate 5-dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 384.0
SHD1_k127_1624063_5 4-vinyl reductase, 4VR K07013,K17763 - - 0.00000000000000002135 83.0
SHD1_k127_1649128_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.908e-205 653.0
SHD1_k127_1649128_1 PFAM oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005729 449.0
SHD1_k127_1649128_2 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 355.0
SHD1_k127_1649128_3 Pfam:DUF385 - - - 0.0000000000000000000000004903 109.0
SHD1_k127_1649128_4 Transposase IS200 like K07491 - - 0.00000001476 57.0
SHD1_k127_1657738_0 Belongs to the Nudix hydrolase family - - - 0.000000000000000000000000000000000000000000001005 171.0
SHD1_k127_1657738_1 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000000004849 160.0
SHD1_k127_1657738_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000005735 146.0
SHD1_k127_1657738_3 NUDIX domain - - - 0.00000000000000000000000000004595 121.0
SHD1_k127_1657738_4 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.000000000002818 69.0
SHD1_k127_1658216_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001502 268.0
SHD1_k127_1658216_2 RNA recognition motif - - - 0.00000000000000000000000001799 112.0
SHD1_k127_1658216_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000006988 93.0
SHD1_k127_1658216_5 YCII-related domain - - - 0.000000000007391 72.0
SHD1_k127_1658269_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K14696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003236 288.0
SHD1_k127_1658269_1 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000003884 257.0
SHD1_k127_1658269_2 PFAM Rhomboid family protein K19225 - 3.4.21.105 0.0000000000000000000000000000000000000000000000000000000002627 212.0
SHD1_k127_1658269_3 Cupin 2, conserved barrel domain protein K11477 - - 0.000000000000000000000000000000000316 136.0
SHD1_k127_1658269_4 SNARE associated Golgi protein - - - 0.000000000000000000000000000002231 124.0
SHD1_k127_1658269_5 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.000000004797 58.0
SHD1_k127_1658301_0 Secreted repeat of unknown function - - - 0.00000000000000000000000000000000000000000000000000000000000000002337 235.0
SHD1_k127_1658301_1 Putative stress-induced transcription regulator - - - 0.000000000000000000000000000000000000001275 155.0
SHD1_k127_1658301_2 TIGRFAM proline-specific peptidases, Bacillus coagulans-type subfamily K01259 - 3.4.11.5 0.0000000000000000000000000000000002295 143.0
SHD1_k127_1658301_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000002085 124.0
SHD1_k127_1658301_4 Anti-sigma-K factor rskA - - - 0.00000000000000000000005142 108.0
SHD1_k127_1658301_5 - - - - 0.0002033 46.0
SHD1_k127_1667091_0 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009154 478.0
SHD1_k127_1667091_1 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 342.0
SHD1_k127_1667091_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003044 239.0
SHD1_k127_1667091_3 Methyltransferase domain - - - 0.000000000000000000078 99.0
SHD1_k127_1667091_4 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.000000000005994 69.0
SHD1_k127_1668811_0 cobalamin binding - - - 1.282e-237 743.0
SHD1_k127_1668811_1 transferase activity, transferring glycosyl groups K09118,K13693,K21349 - 2.4.1.266,2.4.1.268 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 382.0
SHD1_k127_1668811_2 transferase activity, transferring glycosyl groups K21369 - 2.4.1.270 0.000000000000000000000000000000000000000000000001042 194.0
SHD1_k127_1674545_0 dihydropteroate synthase K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005912 295.0
SHD1_k127_1674545_1 PFAM RDD domain containing protein - - - 0.0000000000000000000000000000000000000000000002931 177.0
SHD1_k127_1674545_2 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000008406 160.0
SHD1_k127_1677675_0 spore germination K03298 - - 0.00000000000000000000000000000000000000000000000000000000000000009556 232.0
SHD1_k127_1677675_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000002234 189.0
SHD1_k127_1677675_2 methyltransferase activity - - - 0.0000000000000000000000000000000000009045 144.0
SHD1_k127_1677675_3 methyltransferase activity - - - 0.00000000000000000000000000000000002521 140.0
SHD1_k127_1677675_4 DNA polymerase K02347 - - 0.000000000000000003948 85.0
SHD1_k127_1685164_0 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000002778 226.0
SHD1_k127_1685164_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000004182 229.0
SHD1_k127_1685164_2 mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000000000000000000000000006421 188.0
SHD1_k127_1685164_3 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.000000000000000000001221 97.0
SHD1_k127_1685164_5 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.00000000000000001957 84.0
SHD1_k127_1685164_6 - - - - 0.0000000000002331 74.0
SHD1_k127_1685164_7 PFAM Protein kinase domain K08884 - 2.7.11.1 0.0002314 52.0
SHD1_k127_1686940_0 RNase_H superfamily K07502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 302.0
SHD1_k127_1686940_1 PFAM glycosyl transferase, family 51 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002414 283.0
SHD1_k127_1686940_2 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000000008742 142.0
SHD1_k127_1686940_5 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749 - - 0.000002733 55.0
SHD1_k127_1686940_6 Belongs to the anti-sigma-factor antagonist family - - - 0.0001663 49.0
SHD1_k127_1694261_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 5.075e-221 707.0
SHD1_k127_1694261_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007606 347.0
SHD1_k127_1694261_2 PFAM RNA binding S1 domain protein K02945,K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000002326 272.0
SHD1_k127_1694261_3 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000008514 251.0
SHD1_k127_1694261_4 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000433 245.0
SHD1_k127_1694261_5 N-terminal 7TM region of histidine kinase - - - 0.0000000000000000000000000000000000000000000000000008936 185.0
SHD1_k127_1695493_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 335.0
SHD1_k127_1695493_1 HD domain K01768,K02584,K02660,K07315,K08968,K17763 - 1.8.4.14,3.1.3.3,4.6.1.1 0.00000000000000000000000000000000000000000000000000000009875 214.0
SHD1_k127_1720291_0 phosphorelay sensor kinase activity K07638,K07673,K21009 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000015 302.0
SHD1_k127_1720291_1 phosphorelay sensor kinase activity K07638,K07673,K21009 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000001913 256.0
SHD1_k127_1720291_2 phosphorelay sensor kinase activity K07638,K07673,K21009 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000007304 261.0
SHD1_k127_1720291_3 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000001592 225.0
SHD1_k127_1720291_4 phosphorelay sensor kinase activity K07638,K07673,K21009 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000001423 228.0
SHD1_k127_1720291_5 diguanylate cyclase K19168 - - 0.0002987 53.0
SHD1_k127_1728809_0 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001257 276.0
SHD1_k127_1728809_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000129 149.0
SHD1_k127_1728809_2 Belongs to the bacterial histone-like protein family - - - 0.0000000000000000000000174 103.0
SHD1_k127_1728809_4 - - - - 0.0004135 46.0
SHD1_k127_1733106_0 Two component regulator propeller - - - 5.033e-259 837.0
SHD1_k127_1733106_1 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000005455 130.0
SHD1_k127_1754763_0 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 578.0
SHD1_k127_1754763_1 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007943 407.0
SHD1_k127_1754763_2 peptidase dimerisation domain protein - - - 0.00000000000000000000000000000000000000000000000000001663 196.0
SHD1_k127_1768216_0 Peptidase M16 domain protein K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 554.0
SHD1_k127_1768216_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 507.0
SHD1_k127_1768216_10 Uncharacterized protein conserved in bacteria (DUF2314) - - - 0.0000000003219 67.0
SHD1_k127_1768216_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005193 490.0
SHD1_k127_1768216_3 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000001891 197.0
SHD1_k127_1768216_4 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000006658 186.0
SHD1_k127_1768216_5 methyltransferase - - - 0.00000000000000000000000000000000000000000000008413 175.0
SHD1_k127_1768216_6 dihydroorotate dehydrogenase activity K17828 - 1.3.1.14 0.0000000000000000000000000000000000000002256 159.0
SHD1_k127_1768216_7 - - - - 0.000000000000000000000000000000000007774 148.0
SHD1_k127_1768216_8 F420H(2)-dependent quinone reductase - - - 0.000000000000000000000000000000002402 134.0
SHD1_k127_1768216_9 Rdx family K07401 - - 0.00000000002801 65.0
SHD1_k127_1773034_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 365.0
SHD1_k127_1773034_1 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 361.0
SHD1_k127_1773034_2 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 327.0
SHD1_k127_1773034_3 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 306.0
SHD1_k127_1778300_0 diguanylate cyclase - - - 0.0000000000000000000000000000000000000008682 155.0
SHD1_k127_1778300_1 FAD-binding domain - - - 0.0000000000000000000000000000000000001221 148.0
SHD1_k127_1778300_2 PFAM Rhodanese domain protein - - - 0.00000000000000000000000000005846 121.0
SHD1_k127_179319_0 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000011 203.0
SHD1_k127_179319_1 Phosphodiester glycosidase - - - 0.000000000000000000000000000000000000000000000000000001588 207.0
SHD1_k127_179319_2 Phosphodiester glycosidase - - - 0.000000000000000000000000000000000000000000000001902 191.0
SHD1_k127_18147_0 NmrA-like family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 383.0
SHD1_k127_18147_1 enterobactin catabolic process K07214 - - 0.0000000000000000000000000000000000000000000000000001418 201.0
SHD1_k127_18147_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000003184 135.0
SHD1_k127_1835935_0 PFAM Polynucleotide adenylyltransferase region K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 428.0
SHD1_k127_1835935_1 peptidase S8 and S53, subtilisin, kexin, sedolisin K20754 - 3.4.21.111 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006051 409.0
SHD1_k127_1835935_2 DNA helicase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 319.0
SHD1_k127_1835935_3 PFAM thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007733 289.0
SHD1_k127_1835935_4 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000001236 246.0
SHD1_k127_1835935_5 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000000000000000000000000001848 183.0
SHD1_k127_1835935_6 helicase activity K06877 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.0000000000000000000000000000000000000001948 156.0
SHD1_k127_1835935_7 Ribosomal L27 protein K02899 - - 0.0000000000000000000000000000000004743 132.0
SHD1_k127_1835935_8 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000000000000007554 130.0
SHD1_k127_1835935_9 Alpha beta hydrolase - - - 0.000000000000000000000001192 107.0
SHD1_k127_183930_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 541.0
SHD1_k127_183930_1 ROK family K00886 - 2.7.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004562 317.0
SHD1_k127_183930_2 Nitroreductase family K19285 - 1.5.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000001222 268.0
SHD1_k127_183930_3 phospholipase C K21302 - 3.1.3.64 0.0000000000000000000000000000000000000000000000000000000000000000002631 251.0
SHD1_k127_1841198_0 Regulator K07667 - - 0.00000000000000000000000000000000000000000000000000000000000002785 218.0
SHD1_k127_1841198_1 Amino acid permease - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 0.000000000001223 80.0
SHD1_k127_1843832_0 PFAM ATP-binding region, ATPase domain protein domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007187 257.0
SHD1_k127_1843832_1 PFAM ATP-binding region, ATPase domain protein domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000004414 257.0
SHD1_k127_1843832_2 Gaf domain - - - 0.0000000000000000003169 102.0
SHD1_k127_1843832_3 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 0.00003914 56.0
SHD1_k127_1843887_0 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 380.0
SHD1_k127_1843887_1 cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000001674 193.0
SHD1_k127_1843887_2 Methyltransferase domain - - - 0.00000000000000000000000001707 121.0
SHD1_k127_1844682_0 WD-40 repeat - - - 0.0000000000000000000000000000000000000000000000000000003445 204.0
SHD1_k127_1844682_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000002652 199.0
SHD1_k127_1844682_2 Cache domain - - - 0.000004463 60.0
SHD1_k127_184510_0 Sulfotransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007527 288.0
SHD1_k127_184510_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001149 249.0
SHD1_k127_184510_2 RibD C-terminal domain K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000008989 244.0
SHD1_k127_184510_3 RibD C-terminal domain K03088 - - 0.000000000000000000000000000000000000000000000008848 172.0
SHD1_k127_184510_4 RibD C-terminal domain - - - 0.0000000000000003211 79.0
SHD1_k127_184510_5 SnoaL-like domain K06893 - - 0.0000003712 57.0
SHD1_k127_1854580_0 ATPase associated with various cellular activities, AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 441.0
SHD1_k127_1854580_1 PFAM Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 381.0
SHD1_k127_1854580_2 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 321.0
SHD1_k127_1854580_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 293.0
SHD1_k127_1854580_4 Transcriptional regulator, IclR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006038 286.0
SHD1_k127_1854580_5 peroxiredoxin activity K01055,K01607,K14727 - 3.1.1.24,4.1.1.44 0.0000000000000000000000000000000000000000000001022 171.0
SHD1_k127_1854580_6 methylenetetrahydrofolate reductase (NAD(P)H) activity K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000002988 158.0
SHD1_k127_1854580_7 Sel1-like repeats. - - - 0.0000000000000002056 84.0
SHD1_k127_1854580_8 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000001192 74.0
SHD1_k127_1863681_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 485.0
SHD1_k127_1863681_1 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 455.0
SHD1_k127_1863681_2 glyoxalase - - - 0.0000000000000000000000000000000000000000000000000001305 189.0
SHD1_k127_1863681_3 - - - - 0.0005726 51.0
SHD1_k127_1863874_0 GUN4-like - - - 0.00000000000000000000000000004062 130.0
SHD1_k127_1863874_1 PFAM Formylglycine-generating sulfatase enzyme K20333 - - 0.00000606 50.0
SHD1_k127_1870626_0 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 338.0
SHD1_k127_1870626_1 PFAM histone deacetylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000004237 248.0
SHD1_k127_1870626_2 OsmC-like protein K09136 - - 0.0000000000000000000000000000000000000000000000002105 179.0
SHD1_k127_1870626_3 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.0000000000000000000000000000002582 125.0
SHD1_k127_1870626_4 YacP-like NYN domain K06962 - - 0.00000000000000000000000002297 121.0
SHD1_k127_1870626_6 Zinc finger domain - - - 0.00000146 60.0
SHD1_k127_1880759_0 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006086 374.0
SHD1_k127_1880759_1 PFAM ABC transporter related K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 330.0
SHD1_k127_1880759_2 PFAM basic membrane lipoprotein K07335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 327.0
SHD1_k127_1880759_3 PFAM ABC transporter related K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 282.0
SHD1_k127_1890721_0 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 437.0
SHD1_k127_1890721_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 428.0
SHD1_k127_1890721_2 histidinol dehydrogenase activity K00013,K14152 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0004635,GO:0004636,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009314,GO:0009411,GO:0009416,GO:0009507,GO:0009532,GO:0009536,GO:0009555,GO:0009570,GO:0009628,GO:0009987,GO:0016053,GO:0016462,GO:0016491,GO:0016614,GO:0016616,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0030145,GO:0032501,GO:0032502,GO:0034641,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0048229,GO:0048856,GO:0050896,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23,3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 423.0
SHD1_k127_1890721_3 imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000001201 260.0
SHD1_k127_1890721_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000002283 181.0
SHD1_k127_1890721_5 DinB superfamily - - - 0.000000000000000000000000000002999 130.0
SHD1_k127_1895071_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 374.0
SHD1_k127_1895071_1 ABC transporter K02028 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003924 295.0
SHD1_k127_1895071_2 Amidinotransferase K01482 - 3.5.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008877 291.0
SHD1_k127_1895071_3 COG0765 ABC-type amino acid transport system permease component K02029,K10009,K16962 - - 0.00000000000000000000000000000000000000000000002938 175.0
SHD1_k127_1895071_4 - - - - 0.000000000000000000000000008933 115.0
SHD1_k127_1895071_5 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K02029 - - 0.000009353 48.0
SHD1_k127_1897889_0 PFAM short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006411 335.0
SHD1_k127_1897889_1 lactate racemase activity K22373 - 5.1.2.1 0.000000000000000000000000001071 121.0
SHD1_k127_1897889_2 Methionine synthase B12-binding module cap domain protein K00548 - 2.1.1.13 0.000000000000000000001587 96.0
SHD1_k127_1897889_3 Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000002589 72.0
SHD1_k127_1912157_0 COG0346 Lactoylglutathione lyase and related lyases - - - 0.0000000000000000000000000000000000000000001723 163.0
SHD1_k127_1912157_1 Activator of hsp90 atpase 1 family protein - - - 0.0000000000000000000000000000000000000001429 154.0
SHD1_k127_1912157_2 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000000000000000000000000000000000166 155.0
SHD1_k127_1912157_3 Methyltransferase - - - 0.000000000000000000000000000001002 128.0
SHD1_k127_1912157_4 lactoylglutathione lyase activity - - - 0.000000000000000000000000000001636 121.0
SHD1_k127_1912157_5 - - - - 0.000000000000000000000000000991 118.0
SHD1_k127_1912157_6 translation initiation factor activity K06996 - - 0.00000000000000000008651 94.0
SHD1_k127_1926664_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 383.0
SHD1_k127_1926664_1 BMC - - - 0.0000000000000000000000000000000000000000000000000000000000004745 216.0
SHD1_k127_1926664_2 Catalyzes the decarboxylation of 3-keto-L-gulonate-6-P into L-xylulose-5-P. Is involved in the anaerobic L-ascorbate utilization K03078 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0005996,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0008150,GO:0008152,GO:0009056,GO:0009109,GO:0009111,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0019852,GO:0019854,GO:0033982,GO:0042365,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0051186,GO:0051187,GO:0071704,GO:1901575 4.1.1.85 0.0000000000000000000000000000000000000000000000000001708 199.0
SHD1_k127_1926664_3 BMC domain - - - 0.0000000000000000000000000004458 116.0
SHD1_k127_192793_0 ethanolamine catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 319.0
SHD1_k127_192793_1 GTP cyclohydrolase I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 286.0
SHD1_k127_192793_2 Apoptosis-inducing factor, mitochondrion-associated, C-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009322 241.0
SHD1_k127_192793_3 ISFtu1 transposase K01152 - - - 0.00000000000000000000000000000000000000000000000000001598 196.0
SHD1_k127_192793_4 ethanolamine catabolic process K04024 - - 0.00000000000000000000001129 102.0
SHD1_k127_192793_5 SPTR A7NFQ2 Transposase and inactivated derivatives-like protein - - - 0.0000000006118 65.0
SHD1_k127_192793_6 - - - - 0.000001924 54.0
SHD1_k127_19295_0 malic protein domain protein K00027,K00029 - 1.1.1.38,1.1.1.40 7.74e-297 928.0
SHD1_k127_19295_1 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 318.0
SHD1_k127_19295_2 ABC-2 family transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000002731 219.0
SHD1_k127_19295_3 FtsZ-dependent cytokinesis - - - 0.000000000000000000000000000000000000000000000007498 180.0
SHD1_k127_19295_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000008904 115.0
SHD1_k127_19295_5 Putative zinc-finger - - - 0.0000000000000002842 92.0
SHD1_k127_19295_6 Trehalose utilisation - - - 0.00000000000002456 81.0
SHD1_k127_19295_7 - - - - 0.0000000000002599 75.0
SHD1_k127_1935960_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 388.0
SHD1_k127_1935960_1 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 353.0
SHD1_k127_1935960_10 Represses a number of genes involved in the response to DNA damage (SOS response) - - - 0.000000001146 69.0
SHD1_k127_1935960_11 4Fe-4S dicluster domain - - - 0.000000003527 61.0
SHD1_k127_1935960_2 Leucine carboxyl methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003602 282.0
SHD1_k127_1935960_3 Leucine carboxyl methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001178 242.0
SHD1_k127_1935960_4 ferredoxin-NADP+ reductase activity - - - 0.0000000000000000000000000000000000000000000000001805 182.0
SHD1_k127_1935960_5 PHP-associated - - - 0.0000000000000000000000000000000000000000000000004673 183.0
SHD1_k127_1935960_6 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000002288 164.0
SHD1_k127_1935960_7 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000007284 154.0
SHD1_k127_1935960_8 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000001217 101.0
SHD1_k127_1938649_0 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 448.0
SHD1_k127_1938649_1 Belongs to the pseudouridine synthase RsuA family K06178,K06181 - 5.4.99.20,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000001126 233.0
SHD1_k127_1938649_2 Cysteine-rich secretory protein family - - - 0.0000000000000000000004663 107.0
SHD1_k127_1956088_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.081e-269 838.0
SHD1_k127_1956088_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 468.0
SHD1_k127_1956088_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 370.0
SHD1_k127_1956088_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 309.0
SHD1_k127_1957025_0 PFAM glycoside hydrolase, family 3 domain protein K05349 - 3.2.1.21 4.251e-250 789.0
SHD1_k127_1957025_1 Sugar kinase of the NBD HSP70 family, may containing an N-terminal HTH domain - - - 0.000000000000000000000000000000000000000000000002472 179.0
SHD1_k127_1957025_2 pfam rok - - - 0.0000000000000000000000000000000001866 139.0
SHD1_k127_198396_0 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006337 274.0
SHD1_k127_198396_1 - K14340 - - 0.000000000000000000000000000000000000000000000000000000000004406 227.0
SHD1_k127_198396_2 sh3 domain protein K01448,K04771 - 3.4.21.107,3.5.1.28 0.0000004137 62.0
SHD1_k127_198396_3 Protease prsW family - - - 0.0002429 45.0
SHD1_k127_1984513_0 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005445 583.0
SHD1_k127_1984513_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005953 571.0
SHD1_k127_1984513_2 3-isopropylmalate dehydratase activity K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 447.0
SHD1_k127_1984513_3 HMGL-like K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 359.0
SHD1_k127_1989487_0 PFAM DegV family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 300.0
SHD1_k127_1989487_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 289.0
SHD1_k127_1989487_2 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004716 287.0
SHD1_k127_1989487_3 PFAM RNA binding S1 domain protein - - - 0.000000000000000000000000000000000000000000000000000001345 203.0
SHD1_k127_2012623_0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000006159 235.0
SHD1_k127_2012623_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000001548 121.0
SHD1_k127_2012623_2 Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP K01004 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050520,GO:0071704,GO:0090407,GO:1901576 2.7.8.24 0.00000000000000000000000005787 111.0
SHD1_k127_2015776_0 homoserine kinase type II (protein kinase fold) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005039 269.0
SHD1_k127_2015776_1 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001438 252.0
SHD1_k127_2015776_2 TIGRFAM TIGR02453 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000006914 220.0
SHD1_k127_2036749_0 Beta-lactamase K01286 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000002846 254.0
SHD1_k127_2036749_1 - K01992 - - 0.00000000000000000000000000000006441 135.0
SHD1_k127_2036749_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000306 124.0
SHD1_k127_2036749_3 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.000000000000000000000000271 108.0
SHD1_k127_2036749_4 AntiSigma factor - - - 0.000000000000000652 88.0
SHD1_k127_2036749_5 - - - - 0.00008038 53.0
SHD1_k127_2039659_0 FMN reductase (NADPH) activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004145 276.0
SHD1_k127_2039659_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008145 248.0
SHD1_k127_2039659_2 Pirin C-terminal cupin domain K06911 - - 0.000000000000000000000000000000000000000002601 159.0
SHD1_k127_2039659_3 Domain of unknown function (DUF333) K14475 - - 0.00000000000002051 81.0
SHD1_k127_204434_0 tryptophan 2,3-dioxygenase activity K00453,K03392 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11,4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 392.0
SHD1_k127_204434_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 314.0
SHD1_k127_204434_2 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01838 - 5.4.2.6 0.00000000000000000000000000000000000000000000000005031 194.0
SHD1_k127_204434_3 antisigma factor binding K04749 - - 0.0004013 49.0
SHD1_k127_2048213_0 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000899 562.0
SHD1_k127_2048213_1 Belongs to the thiolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 473.0
SHD1_k127_2048213_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 421.0
SHD1_k127_2048213_3 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172,K00177 - 1.2.7.1,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000003464 239.0
SHD1_k127_2048213_4 - - - - 0.00000000000000000000000000000000000000000001164 165.0
SHD1_k127_2048213_5 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00176 - 1.2.7.3 0.00000000000000000000000001365 111.0
SHD1_k127_2054391_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 552.0
SHD1_k127_2054391_1 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000814 554.0
SHD1_k127_2054391_2 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008624 346.0
SHD1_k127_2054391_3 glycosyl transferase group 1 K08256 - 2.4.1.345 0.000000000000000000000000000000000000000000000000000000000000000000000000000001551 276.0
SHD1_k127_2054391_4 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000006272 251.0
SHD1_k127_2054391_5 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000004284 219.0
SHD1_k127_2054391_6 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000000000000000000000000006055 156.0
SHD1_k127_2054391_7 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000003848 117.0
SHD1_k127_2056492_0 FAD linked oxidases, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 467.0
SHD1_k127_2056492_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 379.0
SHD1_k127_2056492_2 arylsulfatase activity K07014 - - 0.00000000000000000000000000000000001633 153.0
SHD1_k127_2056492_3 Sulfotransferase domain - - - 0.000000000000000000003864 98.0
SHD1_k127_2066548_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2057.0
SHD1_k127_2066548_1 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000009876 234.0
SHD1_k127_2074295_0 ATPase associated with various cellular activities, AAA_5 K03696 - - 0.0 1298.0
SHD1_k127_2074295_2 Cupin domain - - - 0.00000000000000000000004626 106.0
SHD1_k127_2074295_3 geranylgeranyl reductase activity - - - 0.000007049 49.0
SHD1_k127_2074295_4 Immune inhibitor A peptidase M6 - - - 0.0001576 49.0
SHD1_k127_2092652_0 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008525 331.0
SHD1_k127_2092652_1 COG3639 ABC-type phosphate phosphonate transport system, permease component K02042 - - 0.00000000000000000000000000000000000000000000000000000000000000003794 247.0
SHD1_k127_2092652_2 organic phosphonate transport K02044 - - 0.000000000000000000000000000000000000000000000000001126 197.0
SHD1_k127_2092652_3 organic phosphonate transport K02044 - - 0.0000000007609 63.0
SHD1_k127_2100860_0 Putative esterase K07214 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 303.0
SHD1_k127_2100860_1 GDP-mannose mannosyl hydrolase activity K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000005163 205.0
SHD1_k127_2100860_2 PFAM PEBP family protein K06910 - - 0.000000000000000000000000000000000000004796 147.0
SHD1_k127_2100860_3 Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7' K09879 - - 0.00000000000000000000000000000000000006829 155.0
SHD1_k127_2101104_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009219 493.0
SHD1_k127_2101104_1 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 347.0
SHD1_k127_2101104_2 Cation efflux family K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 331.0
SHD1_k127_2101104_3 YbaB/EbfC DNA-binding family K06187,K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000007967 136.0
SHD1_k127_2101104_4 transcriptional regulator K21903 - - 0.0000000000000000000000006911 108.0
SHD1_k127_2101104_5 Lamin Tail Domain - - - 0.00000000000002073 79.0
SHD1_k127_2101104_6 Hydrolase of X-linked nucleoside diphosphate N terminal K01515 - 3.6.1.13 0.000000000001826 74.0
SHD1_k127_211377_0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00303 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 512.0
SHD1_k127_211377_1 PFAM sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005518 312.0
SHD1_k127_211377_2 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000837 291.0
SHD1_k127_211377_3 Glutathione S-transferase, N-terminal domain - - - 0.000000000000000004298 87.0
SHD1_k127_211377_4 GGDEF domain - - - 0.0003492 51.0
SHD1_k127_2123351_0 Stage II sporulation protein M - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 380.0
SHD1_k127_2123351_1 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005005 267.0
SHD1_k127_2123351_2 NAD-dependent epimerase dehydratase K07071 - - 0.00000000000000000000000000000000000000000000000000000000000007351 222.0
SHD1_k127_2123351_3 Metallo-beta-lactamase superfamily K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000002316 176.0
SHD1_k127_2123351_4 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000001264 114.0
SHD1_k127_2125593_0 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008255 423.0
SHD1_k127_2125593_1 protein histidine kinase activity K10819 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 401.0
SHD1_k127_2125593_2 PFAM response regulator receiver K07658 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 308.0
SHD1_k127_2125593_3 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 302.0
SHD1_k127_2125593_4 TIGRFAM serine O-acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004452 276.0
SHD1_k127_2125593_5 Domain of unknown function (DUF4111) - - - 0.00000000000000000000000000000000000000000000000000000003281 205.0
SHD1_k127_2125593_6 regulatory protein, arsR - - - 0.000000000000000000000000000000000001472 140.0
SHD1_k127_2125593_7 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000009201 131.0
SHD1_k127_2125593_8 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000001259 85.0
SHD1_k127_2134786_0 Cys/Met metabolism PLP-dependent enzyme K01739,K01761 - 2.5.1.48,4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 424.0
SHD1_k127_2134786_1 photosynthesis - - - 0.0000000000257 74.0
SHD1_k127_2134786_2 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000001494 56.0
SHD1_k127_2141200_0 Dehydrogenase E1 component K00615 - 2.2.1.1 7.117e-311 971.0
SHD1_k127_2141200_1 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 531.0
SHD1_k127_2141200_2 Catalytic domain of components of various dehydrogenase complexes K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 400.0
SHD1_k127_2141200_3 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007068 278.0
SHD1_k127_2141200_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000004935 167.0
SHD1_k127_2141200_5 - - - - 0.000000000000000000000000000000003708 131.0
SHD1_k127_2141200_7 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000009837 57.0
SHD1_k127_2146047_0 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004774 473.0
SHD1_k127_2146047_1 Phosphoesterase family K01114 - 3.1.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 436.0
SHD1_k127_215768_0 metal-dependent phosphohydrolase, HD sub domain K07037 - - 5.629e-211 678.0
SHD1_k127_215768_1 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000127 150.0
SHD1_k127_215768_2 NUDIX domain K03574 - 3.6.1.55 0.0000000000000000000000000000000000000628 147.0
SHD1_k127_215768_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000006946 126.0
SHD1_k127_215768_4 PFAM diacylglycerol kinase K00901 - 2.7.1.107 0.0000000000000000000000000003869 122.0
SHD1_k127_2168374_0 WD40 repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 600.0
SHD1_k127_216859_0 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 366.0
SHD1_k127_216859_1 Citrate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009495 290.0
SHD1_k127_216859_2 AraC-like ligand binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002948 234.0
SHD1_k127_216859_3 LysE type translocator K11249 - - 0.0000000000000000000000000000000000000000001042 167.0
SHD1_k127_216859_4 PFAM Citrate transporter - - - 0.00000000000000000000000000001478 124.0
SHD1_k127_2168623_0 Molydopterin dinucleotide binding domain - - - 2.922e-221 707.0
SHD1_k127_2168623_1 PFAM peptidase M48 Ste24p K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 330.0
SHD1_k127_2168623_2 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000001139 212.0
SHD1_k127_2168623_3 Bacterial regulatory proteins, tetR family - - - 0.00004876 49.0
SHD1_k127_2196484_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 288.0
SHD1_k127_2196484_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004662 250.0
SHD1_k127_2196484_2 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 - 3.6.3.12 0.000000000000000000000000000000000000000000000000000000000000000000001139 242.0
SHD1_k127_2196484_3 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.0000002152 61.0
SHD1_k127_2209231_0 PFAM extracellular solute-binding protein, family 5 K02035 - - 4.297e-199 635.0
SHD1_k127_2209231_1 SMART phosphoesterase PHP domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 429.0
SHD1_k127_2209231_2 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000006186 185.0
SHD1_k127_2209231_3 Shikimate kinase - - - 0.0000000000000000000000001056 109.0
SHD1_k127_2209231_4 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.000000000000000000353 88.0
SHD1_k127_2214915_0 Thermophilic metalloprotease (M29) K19689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 396.0
SHD1_k127_2214915_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000002331 130.0
SHD1_k127_2225092_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004521 341.0
SHD1_k127_2225092_1 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000001266 230.0
SHD1_k127_2225092_2 2-dehydropantoate 2-reductase activity K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000007888 203.0
SHD1_k127_2225092_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000005677 170.0
SHD1_k127_2225092_4 - - - - 0.00000000000000000000000000000008975 136.0
SHD1_k127_2225092_5 gas vesicle protein - - - 0.0000004155 54.0
SHD1_k127_2236943_0 PFAM ABC transporter related K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 561.0
SHD1_k127_2236943_1 PFAM ROK family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 427.0
SHD1_k127_2236943_2 PFAM binding-protein-dependent transport systems inner membrane component K15771 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000409 366.0
SHD1_k127_2236943_3 PFAM extracellular solute-binding protein family 1 K15770 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 330.0
SHD1_k127_2236943_4 PFAM binding-protein-dependent transport systems inner membrane component K15772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 318.0
SHD1_k127_2239433_0 glutamate synthase alpha subunit K00265 - 1.4.1.13,1.4.1.14 0.0 1721.0
SHD1_k127_2239433_1 Catalyzes the NADPH-dependent reduction of LysW - aminoadipate 6-phosphate to yield LysW -aminoadipate 6- semialdehyde K05829 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007401 482.0
SHD1_k127_2239433_2 Belongs to the RimK family K05827 - 6.3.2.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005151 378.0
SHD1_k127_2239433_3 Belongs to the acetylglutamate kinase family. LysZ subfamily K05828 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009941 315.0
SHD1_k127_2239433_4 glutamate synthase alpha subunit K00265 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000003172 265.0
SHD1_k127_2243939_0 4-amino-4-deoxy-L-arabinose transferase activity K00728 - 2.4.1.109 0.0000000000000000000000000000000000000000000000000000000000000002227 239.0
SHD1_k127_2243939_1 4-amino-4-deoxy-L-arabinose transferase activity K02277 - 1.9.3.1 0.000000000000003509 83.0
SHD1_k127_2258557_0 PFAM glycosidase PH1107-related K18785,K20885 - 2.4.1.319,2.4.1.320,2.4.1.339,2.4.1.340 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 543.0
SHD1_k127_2258557_1 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 473.0
SHD1_k127_2258557_2 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01190 - 3.2.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 299.0
SHD1_k127_2258557_3 Glyco_18 K01183 - 3.2.1.14 0.000000000000000000000000000000000000000000000000000000000000000000005362 246.0
SHD1_k127_2258557_4 Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides K03478 - 3.5.1.105 0.0000000000000000000000000000000000000000004563 167.0
SHD1_k127_2258557_5 PFAM extracellular solute-binding protein family 1 K02027 - - 0.00000000002552 71.0
SHD1_k127_2267333_0 SMART alpha amylase, catalytic sub domain K01187,K05343 - 3.2.1.1,3.2.1.20,5.4.99.16 6.919e-224 707.0
SHD1_k127_2267333_1 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 449.0
SHD1_k127_2267333_2 TAP-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006734 336.0
SHD1_k127_2267333_3 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007783 278.0
SHD1_k127_2267333_4 Acyltransferase family - - - 0.0000000000000000000000000000000000000002954 164.0
SHD1_k127_2267333_5 Cytochrome b5-like Heme Steroid binding domain - - - 0.0000000009616 64.0
SHD1_k127_2267333_6 monooxygenase activity K06966 - 3.2.2.10 0.0002488 47.0
SHD1_k127_2284087_0 Belongs to the PEP-utilizing enzyme family K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 517.0
SHD1_k127_2284087_1 TIGRFAM dihydroxyacetone kinase, DhaK subunit K05878 - 2.7.1.121 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 349.0
SHD1_k127_2284087_2 TIGRFAM dihydroxyacetone kinase, L subunit K05879 - 2.7.1.121 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009539 278.0
SHD1_k127_2284087_3 rRNA (adenine-N6,N6-)-dimethyltransferase activity K00561,K02528 - 2.1.1.182,2.1.1.184 0.0000000000000000000000000000000000000005171 156.0
SHD1_k127_2303353_0 Recombinase zinc beta ribbon domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 389.0
SHD1_k127_2303353_1 WG containing repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000002725 249.0
SHD1_k127_2303353_2 Helix-turn-helix domain - - - 0.0000000000000000000000000003425 119.0
SHD1_k127_2303570_0 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 2.98e-248 778.0
SHD1_k127_2303570_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 353.0
SHD1_k127_2303570_2 PFAM Methyltransferase K00598 - 2.1.1.144 0.000000000000000000000000000000000000000000000000000000000000000000000000000007249 267.0
SHD1_k127_2303570_3 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000004522 225.0
SHD1_k127_2303570_4 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000003141 183.0
SHD1_k127_2303570_5 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000009839 48.0
SHD1_k127_2307249_0 PFAM glycosyl transferase, family 51 - - - 3.001e-283 888.0
SHD1_k127_2307249_2 MaoC like domain - - - 0.0000000000000000000000000000000000000000007473 162.0
SHD1_k127_23084_0 PFAM glycoside hydrolase family 29 (alpha-L-fucosidase) K01206 - 3.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000002897 267.0
SHD1_k127_23084_1 PFAM ROK family protein K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000492 263.0
SHD1_k127_23084_2 energy transducer activity K03531,K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001919 257.0
SHD1_k127_23084_3 - - - - 0.000000008237 68.0
SHD1_k127_23212_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 322.0
SHD1_k127_23212_2 PFAM Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 291.0
SHD1_k127_23212_3 PFAM cytochrome c-type biogenesis protein CcmB K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 292.0
SHD1_k127_23212_4 PFAM ABC transporter related K02193 - 3.6.3.41 0.000000000000000000000000000000000000000003329 156.0
SHD1_k127_2331312_0 ATP-dependent transcriptional regulator, MalT-like, LuxR family K03556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001032 243.0
SHD1_k127_2331312_1 - - - - 0.00000000000000000000000000000000000000000000000000000000005406 209.0
SHD1_k127_2331312_2 - - - - 0.000000000000000000000000000000000000000000002288 168.0
SHD1_k127_2331312_3 Domain of unknown function (DUF4386) - - - 0.00000000000000000000000000000008223 132.0
SHD1_k127_2331312_4 - - - - 0.00000000000000000000000006967 109.0
SHD1_k127_2337769_0 copper-translocating P-type ATPase K01533 - 3.6.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 284.0
SHD1_k127_2337769_1 Peptidase family M1 domain - - - 0.00000004378 56.0
SHD1_k127_2345523_0 PFAM Bacterial regulatory proteins, lacI family K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000383 280.0
SHD1_k127_2345523_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000001933 237.0
SHD1_k127_2345523_2 ABC transporter, substratebinding protein K10232 - - 0.00000000000000000000000000000000000000000000000000000000000237 225.0
SHD1_k127_2345523_3 RF-1 domain K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.000000000000000000000000000000000000015 148.0
SHD1_k127_2345523_4 ABC-type sugar transport system, permease component K10234 - - 0.0007487 45.0
SHD1_k127_2350569_0 PFAM glycosyl transferase family 3 K00756 - 2.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 529.0
SHD1_k127_2350569_1 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001847 255.0
SHD1_k127_235937_0 NmrA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003399 285.0
SHD1_k127_235937_2 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000658 187.0
SHD1_k127_235937_3 Transcriptional regulator araC family protein - - - 0.00000000000000000000000000000000000000000000000009015 185.0
SHD1_k127_235937_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000542 146.0
SHD1_k127_235937_5 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000003807 70.0
SHD1_k127_235937_6 PFAM Roadblock LC7 family protein K07131 - - 0.0000000002872 68.0
SHD1_k127_235937_7 Ribosomal protein L7/L12 C-terminal domain - - - 0.000002831 53.0
SHD1_k127_2360333_0 PFAM DJ-1 PfpI family K03152 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001782 283.0
SHD1_k127_2360333_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001152 276.0
SHD1_k127_2360333_2 DUF218 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001262 236.0
SHD1_k127_2360333_3 Histidine kinase K07680,K07778,K11617,K14988 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000003001 213.0
SHD1_k127_2360333_4 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K01501,K12251 - 3.5.1.53,3.5.5.1 0.0000000000000000000000000000000000000009779 152.0
SHD1_k127_2360333_5 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000000000000000000000428 133.0
SHD1_k127_2360333_6 (belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family) - - - 0.00000000000000000000000000286 116.0
SHD1_k127_2360333_7 - - - - 0.0000001653 61.0
SHD1_k127_2373943_0 PFAM Glycoside hydrolase family 42 domain protein K12308 - 3.2.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 374.0
SHD1_k127_2373943_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 364.0
SHD1_k127_2373943_2 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009739 254.0
SHD1_k127_2374205_0 ECF sigma factor K03088 - - 0.00000000000000000000000000000003894 132.0
SHD1_k127_2374205_1 - - - - 0.000000000000006716 83.0
SHD1_k127_2374205_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000001292 61.0
SHD1_k127_2374205_3 - - - - 0.000006057 57.0
SHD1_k127_2391754_0 Alpha-L-fucosidase - - - 0.00000000000000000000000000000000001572 145.0
SHD1_k127_2391754_1 Cellulose Binding Domain Type IV - - - 0.000000000000000000000008142 110.0
SHD1_k127_2391754_2 COG COG1349 Transcriptional regulators of sugar metabolism - - - 0.00000000001469 74.0
SHD1_k127_2391754_3 Protein of unknown function with HXXEE motif - - - 0.00003972 53.0
SHD1_k127_2393636_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 1.024e-226 709.0
SHD1_k127_2393636_1 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 362.0
SHD1_k127_2393636_2 Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008848 353.0
SHD1_k127_2393636_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000003244 156.0
SHD1_k127_2393636_4 - - - - 0.00004392 51.0
SHD1_k127_2399282_0 Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system K10441 - 3.6.3.17 4.268e-237 742.0
SHD1_k127_2399282_1 Sugar ABC transporter permease K10440 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 370.0
SHD1_k127_2399282_2 Ribose ABC transporter substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 351.0
SHD1_k127_2399282_3 Branched-chain amino acid transport system / permease component K10440 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003941 340.0
SHD1_k127_2399282_4 Xylose isomerase-like TIM barrel K03079 - 5.1.3.22 0.000001438 50.0
SHD1_k127_2404811_0 Haemolysin-III related K11068 - - 0.00000000000000000000000000000000000000000000000000000002194 203.0
SHD1_k127_2404811_1 Methyltransferase type 11 - - - 0.000000000000000000000000000002961 129.0
SHD1_k127_2404811_2 - - - - 0.00000000000000000000000002162 111.0
SHD1_k127_2404811_3 gas vesicle protein - - - 0.00000000000000000002365 94.0
SHD1_k127_2415255_0 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 571.0
SHD1_k127_2415255_1 Class II Aldolase and Adducin N-terminal domain K01629 - 4.1.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007436 298.0
SHD1_k127_2415255_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000682 156.0
SHD1_k127_2415255_3 Methyltransferase domain K00598 - 2.1.1.144 0.00000000000384 72.0
SHD1_k127_2416354_0 tRNA synthetase, class II (D, K and N) K01893 - 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 558.0
SHD1_k127_2416354_1 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 306.0
SHD1_k127_2416354_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004437 259.0
SHD1_k127_2416354_3 LURP-one-related - - - 0.0000000000000000000000000000000000000000000000000000000000003641 215.0
SHD1_k127_2416354_4 family 25 K01185,K07273 GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.17 0.00000000000000000000000000000000000000000000007462 181.0
SHD1_k127_2416354_5 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000001981 118.0
SHD1_k127_2417530_0 PFAM polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002617 287.0
SHD1_k127_2417530_1 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000004823 232.0
SHD1_k127_2417530_2 -O-antigen - - - 0.0000000000000000001826 96.0
SHD1_k127_2427107_0 FGGY family of carbohydrate kinases, C-terminal domain K00854 - 2.7.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 589.0
SHD1_k127_2427107_1 Domain of unknown function (DUF4380) - - - 0.000000000000000000000000000000000000000000000000000000000000001452 228.0
SHD1_k127_2427107_2 transmembrane transporter activity - - - 0.0000000000000000000000006024 106.0
SHD1_k127_2433367_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 562.0
SHD1_k127_2433367_1 beta-galactosidase activity K01190,K17624 - 3.2.1.23,3.2.1.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004677 301.0
SHD1_k127_2433367_2 Low-density lipoprotein-receptor YWTD domain - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009416,GO:0009507,GO:0009532,GO:0009534,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0010196,GO:0016020,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:1990066 - 0.000000000000000000000000000000000000000000000000000302 192.0
SHD1_k127_2433367_3 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000007108 136.0
SHD1_k127_2433367_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.000002675 49.0
SHD1_k127_2451070_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 451.0
SHD1_k127_2451070_1 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 404.0
SHD1_k127_2451070_2 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000002782 183.0
SHD1_k127_2451070_3 Cell wall-associated hydrolase (invasion-associated protein) - - - 0.0000008369 60.0
SHD1_k127_2469573_0 SMART Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007519 438.0
SHD1_k127_2469573_1 homoserine transmembrane transporter activity K06600,K06895 - - 0.000000000000000000000000000000000000000000000000000000000000002729 224.0
SHD1_k127_2469573_2 Zinc-binding dehydrogenase K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000002067 220.0
SHD1_k127_2469573_3 PFAM pyridoxamine 5'-phosphate oxidase-related - - - 0.000000000000000000000000000000000000000000000000000000004465 203.0
SHD1_k127_2469573_4 Psort location CytoplasmicMembrane, score - - - 0.0000000004397 68.0
SHD1_k127_2481507_0 Belongs to the carbamoyltransferase HypF family K04656 - - 4.653e-218 703.0
SHD1_k127_2481507_1 Formate/nitrite transporter K06212 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 367.0
SHD1_k127_2481507_2 hydrogenase expression formation protein HypD K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003581 321.0
SHD1_k127_2481507_3 Hydrogenase accessory protein HypB K03189,K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 312.0
SHD1_k127_2481507_4 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000001839 115.0
SHD1_k127_2481507_5 Hydrogenase expression formation protein K04653 - - 0.000000000000000000000001685 104.0
SHD1_k127_2481507_6 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.00000000000002755 76.0
SHD1_k127_2485186_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 459.0
SHD1_k127_2485186_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 324.0
SHD1_k127_2485186_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000007102 153.0
SHD1_k127_2494300_0 elongation factor Tu domain 2 protein K06207 - - 1.923e-209 659.0
SHD1_k127_2494300_1 elongation factor Tu domain 2 protein K06207 - - 0.000000000000000000000000000000000000000000000000000000000000000000004904 237.0
SHD1_k127_2494300_2 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000001528 223.0
SHD1_k127_2494300_3 cellulase activity K01218,K12132 - 2.7.11.1,3.2.1.78 0.0000005895 58.0
SHD1_k127_2495447_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 396.0
SHD1_k127_2495447_1 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000003524 165.0
SHD1_k127_2495447_2 COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 - - 0.00002703 56.0
SHD1_k127_2495447_3 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 0.0001071 44.0
SHD1_k127_2500265_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K01919,K03072,K12257 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008414 375.0
SHD1_k127_2500265_1 PFAM peptidase M1, membrane alanine aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000006668 245.0
SHD1_k127_2509322_0 Protein-glutamate methylesterase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 479.0
SHD1_k127_2509322_1 PAS domain K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 315.0
SHD1_k127_2509322_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001419 287.0
SHD1_k127_2509322_3 response regulator K07689 - - 0.00000000000000000000000000008908 119.0
SHD1_k127_2509322_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000008726 57.0
SHD1_k127_2509322_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.180 0.000004033 59.0
SHD1_k127_2509322_6 PFAM response regulator receiver - - - 0.00001005 49.0
SHD1_k127_2509746_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 1.676e-278 867.0
SHD1_k127_2509746_1 Protein of unknown function (DUF418) K07148 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287 532.0
SHD1_k127_2509746_2 - - - - 0.0000000000000000000007112 97.0
SHD1_k127_2509746_3 PFAM Bacterial regulatory protein, arsR family K21903 - - 0.00000000000000000002456 95.0
SHD1_k127_2509906_0 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003462 490.0
SHD1_k127_2509906_1 SMART serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009244 254.0
SHD1_k127_2509906_2 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000001399 168.0
SHD1_k127_2529978_0 Pilus assembly protein K12279 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 391.0
SHD1_k127_2529978_1 PFAM Fimbrial assembly family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002326 259.0
SHD1_k127_2529978_2 carbon utilization K12280 - - 0.000000000000000000000000000000000000000000000000000000000000000000001367 243.0
SHD1_k127_2542474_0 PFAM Stage V sporulation protein S K06416 - - 0.00000000000000000000000007909 110.0
SHD1_k127_2542474_1 CsbD-like - - - 0.00000000000000005312 83.0
SHD1_k127_2542474_10 - - - - 0.0001385 46.0
SHD1_k127_2542474_2 Pfam:RRM_6 - - - 0.0000000000252 67.0
SHD1_k127_2542474_3 diguanylate cyclase - - - 0.00000000003115 64.0
SHD1_k127_2542474_4 helix_turn_helix, Lux Regulon - - - 0.00000002301 61.0
SHD1_k127_2542474_5 cyclic-guanylate-specific phosphodiesterase activity - - - 0.0000004394 53.0
SHD1_k127_2542474_6 helix_turn_helix, Lux Regulon - - - 0.0000007855 53.0
SHD1_k127_2542474_7 gas vesicle protein - - - 0.000003005 54.0
SHD1_k127_2542474_8 Belongs to the UPF0337 (CsbD) family - - - 0.000007783 52.0
SHD1_k127_2542474_9 - - - - 0.00003667 52.0
SHD1_k127_2547315_0 Domain of Unknown Function (DUF1206) - - - 0.0000000000000000000000000000000000000000000000000000000638 206.0
SHD1_k127_2547315_1 PFAM Diacylglycerol kinase, catalytic - - - 0.0000000000000000000000000000000000000000001995 175.0
SHD1_k127_2547315_2 Acid phosphatase homologues K19302 - 3.6.1.27 0.0000000000000002148 88.0
SHD1_k127_2547315_3 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.00000000000004967 81.0
SHD1_k127_2550516_0 ABC transporter K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 436.0
SHD1_k127_2550516_1 Cation efflux family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001118 252.0
SHD1_k127_2550516_2 Predicted membrane protein (DUF2127) - - - 0.000000000000000000000000000000002799 136.0
SHD1_k127_2550516_3 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000006435 106.0
SHD1_k127_2550516_4 Belongs to the bacterial histone-like protein family - - - 0.00000000000000000000007083 101.0
SHD1_k127_2550516_5 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000001412 49.0
SHD1_k127_2550516_6 PFAM Alcohol dehydrogenase GroES-like - - - 0.000007822 48.0
SHD1_k127_2555933_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 5.295e-207 652.0
SHD1_k127_2555933_1 FCD - - - 0.00000000000000000000007964 104.0
SHD1_k127_2568003_0 PFAM luciferase family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006896 354.0
SHD1_k127_2568003_1 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 320.0
SHD1_k127_2568003_10 Nucleotidyltransferase domain - - - 0.000000000000000000000000000000000000001112 153.0
SHD1_k127_2568003_11 thiolester hydrolase activity K06889 - - 0.0000000000000000000000000000000000005641 153.0
SHD1_k127_2568003_12 Type IV pilus biogenesis stability protein PilW - - - 0.00000000000000000000000000000000001782 141.0
SHD1_k127_2568003_13 DUF218 domain - - - 0.0000000000000000000004154 104.0
SHD1_k127_2568003_14 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000002663 87.0
SHD1_k127_2568003_16 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.00006285 51.0
SHD1_k127_2568003_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 306.0
SHD1_k127_2568003_3 FES K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 301.0
SHD1_k127_2568003_4 Crp-like helix-turn-helix domain K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000001068 236.0
SHD1_k127_2568003_5 Domain of unknown function DUF83 K07464 - 3.1.12.1 0.0000000000000000000000000000000000000000000000000000003877 197.0
SHD1_k127_2568003_6 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000007789 171.0
SHD1_k127_2568003_7 PFAM MazG nucleotide pyrophosphohydrolase - - - 0.0000000000000000000000000000000000000000002126 160.0
SHD1_k127_2568003_8 PFAM thioesterase superfamily protein K07107 - - 0.000000000000000000000000000000000000000005954 159.0
SHD1_k127_2568003_9 acetyltransferase K00621 - 2.3.1.4 0.000000000000000000000000000000000000000007838 165.0
SHD1_k127_25832_0 Peptidase M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004259 324.0
SHD1_k127_25832_1 Cytidylyltransferase K07257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000427 243.0
SHD1_k127_25832_2 Glycosyl transferase, family 2 K20444 - - 0.000000000000000000000000000000000000000000000003974 176.0
SHD1_k127_25832_3 Aminoglycoside 3-N-acetyltransferase K00662 - 2.3.1.81 0.0000000000000000000000000000000000000000002696 168.0
SHD1_k127_25832_4 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000005609 159.0
SHD1_k127_258427_0 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007652 528.0
SHD1_k127_258427_1 PFAM Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 381.0
SHD1_k127_258427_2 PFAM NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006598 272.0
SHD1_k127_258427_3 CobQ CobB MinD ParA nucleotide binding domain - - - 0.00000000000000000000000000000000000000006161 171.0
SHD1_k127_258427_4 Flagellar hook protein flgE - - - 0.0000000000000000000000000000002749 130.0
SHD1_k127_2593580_0 ethanolamine catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 317.0
SHD1_k127_2593580_1 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006546 309.0
SHD1_k127_2593580_2 ethanolamine catabolic process K04024 - - 0.000000000000000000000000000000000000000000000000000029 190.0
SHD1_k127_2593580_3 ABC-type multidrug transport system, permease component K01992 - - 0.00000001723 58.0
SHD1_k127_2593580_4 - - - - 0.000007434 53.0
SHD1_k127_2610991_0 PFAM metal-dependent phosphohydrolase, HD sub domain K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000008763 252.0
SHD1_k127_2610991_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000002722 238.0
SHD1_k127_2610991_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000001727 175.0
SHD1_k127_2610991_3 protein methyltransferase activity K11434,K15984,K20421 - 2.1.1.242,2.1.1.303,2.1.1.319 0.00000000000002142 74.0
SHD1_k127_2623913_0 von Willebrand factor (vWF) type A domain K07114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009568 317.0
SHD1_k127_2623913_2 signal transduction HD GYP protein - - - 0.00000000000000000000000000000000000000000000000000000000000000763 228.0
SHD1_k127_2623913_3 TIGRFAM endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000001785 82.0
SHD1_k127_2623913_4 PFAM DoxX K16937 - 1.8.5.2 0.00000000007374 69.0
SHD1_k127_262574_0 6-phosphogluconate dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 484.0
SHD1_k127_262574_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 465.0
SHD1_k127_262574_2 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001295 277.0
SHD1_k127_262574_3 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000007984 162.0
SHD1_k127_262574_4 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.000000000007779 66.0
SHD1_k127_2647260_0 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 405.0
SHD1_k127_2647260_1 glycerophosphodiester transmembrane transport K02026,K10119 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004566 359.0
SHD1_k127_2647260_2 transmembrane transport K02025,K15771 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000519 356.0
SHD1_k127_2647260_3 carbohydrate transport K02027 - - 0.000000000004646 68.0
SHD1_k127_2654226_0 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 298.0
SHD1_k127_2654226_1 PFAM major facilitator superfamily MFS_1 K08151 - - 0.000000000000000000000000000000000000000000000000000000000000000000006426 250.0
SHD1_k127_2654226_2 membrane K08987 - - 0.000000000000000000000000000000000000003143 152.0
SHD1_k127_2654226_3 Methyltransferase - - - 0.000000000000000000000001148 108.0
SHD1_k127_2655669_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0043937,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0045333,GO:0046459,GO:0047456,GO:0048037,GO:0050789,GO:0050793,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0065007,GO:0071704,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 0.0 1163.0
SHD1_k127_2655669_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 8.277e-206 689.0
SHD1_k127_2655669_2 PFAM Adenosine AMP deaminase K01488 - 3.5.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 404.0
SHD1_k127_2655669_3 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000000000007952 100.0
SHD1_k127_2655669_4 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000001979 99.0
SHD1_k127_2658336_0 pathogenesis K21471,K21687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 492.0
SHD1_k127_2658336_1 PFAM NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007332 460.0
SHD1_k127_2658336_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000008464 207.0
SHD1_k127_2658336_3 Carbon-nitrogen hydrolase - - - 0.000000000000000003561 96.0
SHD1_k127_2658336_4 Serine aminopeptidase, S33 - - - 0.0000003161 54.0
SHD1_k127_2658336_5 - - - - 0.00002432 55.0
SHD1_k127_2664013_0 sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009006 295.0
SHD1_k127_2664013_1 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000001545 229.0
SHD1_k127_2664013_2 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000004442 132.0
SHD1_k127_2664013_3 Ribosomal protein S21 K02970 - - 0.0000000000000000001464 89.0
SHD1_k127_2664013_4 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.00000203 56.0
SHD1_k127_2682860_0 dipeptide transport K02035 - - 2.382e-230 726.0
SHD1_k127_2682860_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009212 487.0
SHD1_k127_2682860_2 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.00000000000000000000000000000000000002442 145.0
SHD1_k127_269226_0 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 366.0
SHD1_k127_269226_1 Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 349.0
SHD1_k127_269226_2 ligase activity K01469 - 3.5.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000923 293.0
SHD1_k127_269226_3 Methionine synthase B12-binding module cap domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009997 251.0
SHD1_k127_2695983_0 Serine threonine protein kinase K12132 - 2.7.11.1 9.749e-276 860.0
SHD1_k127_2695983_1 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 308.0
SHD1_k127_2695983_10 PFAM von Willebrand factor type A K07114 - - 0.000000000000000000000000000004675 124.0
SHD1_k127_2695983_11 Protein of unknown function (DUF4230) - - - 0.00000000000000000000000000007835 119.0
SHD1_k127_2695983_12 Histidine kinase K03406,K07673,K07675 - 2.7.13.3 0.000000000000000000000004021 121.0
SHD1_k127_2695983_2 PFAM Biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 302.0
SHD1_k127_2695983_3 PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002076 287.0
SHD1_k127_2695983_4 DNA binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004135 256.0
SHD1_k127_2695983_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000009724 212.0
SHD1_k127_2695983_6 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000008918 188.0
SHD1_k127_2695983_7 Belongs to the DapA family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000001932 185.0
SHD1_k127_2695983_8 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000001428 136.0
SHD1_k127_2695983_9 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000001747 149.0
SHD1_k127_2708959_0 glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000002465 248.0
SHD1_k127_2708959_1 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000001527 179.0
SHD1_k127_2708959_3 Histidine kinase - - - 0.00000000000001803 78.0
SHD1_k127_2712688_0 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 1.806e-318 999.0
SHD1_k127_2712688_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 2.345e-288 898.0
SHD1_k127_2712688_10 PFAM aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.0000000000000000000000000001963 125.0
SHD1_k127_2712688_12 protein secretion K03116 - - 0.00000002429 57.0
SHD1_k127_2712688_2 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 562.0
SHD1_k127_2712688_3 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000161 267.0
SHD1_k127_2712688_4 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000001358 190.0
SHD1_k127_2712688_5 - - - - 0.00000000000000000000000000000000000000000000000001518 185.0
SHD1_k127_2712688_6 - - - - 0.000000000000000000000000000000000000000000002802 172.0
SHD1_k127_2712688_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000005738 169.0
SHD1_k127_2712688_8 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000009087 158.0
SHD1_k127_2712688_9 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000001605 164.0
SHD1_k127_2723922_0 Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 302.0
SHD1_k127_2723922_1 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.00000000000000000000000000000000000000000000000000009608 191.0
SHD1_k127_2723922_2 TIR domain - - - 0.0000000000000000000000000000000000000001048 161.0
SHD1_k127_2723922_3 Glycine cleavage T-protein C-terminal barrel domain - - - 0.00000000000000000000000000000000000001532 145.0
SHD1_k127_2725992_0 phosphatase - - - 0.00000001788 62.0
SHD1_k127_2728603_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding K00156,K01652 - 1.2.5.1,2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003397 426.0
SHD1_k127_2728603_1 SMART PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008389 402.0
SHD1_k127_2728603_2 ABC transporter substrate binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 318.0
SHD1_k127_2730389_0 Belongs to the glycosyl hydrolase 13 family - - - 3.26e-285 891.0
SHD1_k127_2730389_1 Transposase DDE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005221 376.0
SHD1_k127_2748555_0 PFAM ABC transporter transmembrane region - - - 9.075e-201 638.0
SHD1_k127_2748555_1 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001262 283.0
SHD1_k127_2748555_2 PFAM ABC transporter transmembrane region K06147 - - 0.0000000000000000000006009 96.0
SHD1_k127_2748555_3 FtsZ-dependent cytokinesis K03975,K18292,K19302 GO:0000003,GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0032505,GO:0043093,GO:0044464,GO:0051301,GO:0071944 3.6.1.27,4.1.3.25 0.0000000000000000000107 103.0
SHD1_k127_2748555_4 PFAM ABC transporter transmembrane region - - - 0.000000004402 59.0
SHD1_k127_2759009_0 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 4.266e-219 702.0
SHD1_k127_2759009_1 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 529.0
SHD1_k127_2759009_10 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000007404 186.0
SHD1_k127_2759009_12 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.000000000000000004837 86.0
SHD1_k127_2759009_13 PFAM peptidase M20 - - - 0.000006107 49.0
SHD1_k127_2759009_2 Belongs to the ParA family K03609 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 387.0
SHD1_k127_2759009_3 Belongs to the SEDS family K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 379.0
SHD1_k127_2759009_4 PFAM DegV family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 307.0
SHD1_k127_2759009_5 Cytidine monophosphokinase K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 296.0
SHD1_k127_2759009_6 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001679 283.0
SHD1_k127_2759009_7 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000005793 230.0
SHD1_k127_2759009_8 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000004269 229.0
SHD1_k127_2759009_9 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.00000000000000000000000000000000000000000000000000000000000001768 222.0
SHD1_k127_2772237_0 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000479 532.0
SHD1_k127_2772237_1 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 471.0
SHD1_k127_2772237_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 435.0
SHD1_k127_2772237_3 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 302.0
SHD1_k127_2772237_4 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.0000000000000000000000000000000000000000000001277 171.0
SHD1_k127_2772237_5 geranylgeranyl reductase activity - - - 0.0000000000000000008591 93.0
SHD1_k127_2772237_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000007667 77.0
SHD1_k127_2798395_0 Belongs to the LDH MDH superfamily K00016 - 1.1.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 423.0
SHD1_k127_2798395_1 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000000000009569 198.0
SHD1_k127_2798395_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000005326 149.0
SHD1_k127_2798395_3 Transcriptional regulator - - - 0.000000000000000000000000003098 120.0
SHD1_k127_2798395_4 Endoribonuclease L-PSP - - - 0.00000000000000002031 83.0
SHD1_k127_2813998_0 COG1668 ABC-type Na efflux pump, permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009865 425.0
SHD1_k127_2813998_1 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 387.0
SHD1_k127_2813998_2 ABC-2 family transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000903 260.0
SHD1_k127_2813998_3 FMN_bind - - - 0.000000000000000000000107 104.0
SHD1_k127_282241_0 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 362.0
SHD1_k127_282241_1 PFAM Dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000118 176.0
SHD1_k127_282241_2 NAD(P)H dehydrogenase (quinone) activity - - - 0.000000000000000000000000000133 119.0
SHD1_k127_282241_3 - - - - 0.00000000000000000000004909 104.0
SHD1_k127_282241_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0005221 45.0
SHD1_k127_2825278_0 PFAM deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 299.0
SHD1_k127_2825278_1 Radical SAM superfamily K04070 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000435 301.0
SHD1_k127_2825278_2 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.00000000000000000000000000000000000000000001094 168.0
SHD1_k127_2825278_3 Thioredoxin - - - 0.000000000000000000000000000000000000009005 155.0
SHD1_k127_2825278_4 - - - - 0.00000000000000007048 91.0
SHD1_k127_2825278_5 - - - - 0.0000000000001018 74.0
SHD1_k127_2832617_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 437.0
SHD1_k127_2832617_1 ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006921 389.0
SHD1_k127_2832617_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 359.0
SHD1_k127_2832617_3 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000003788 157.0
SHD1_k127_2832617_4 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000000000000000000001548 121.0
SHD1_k127_2832617_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000008388 107.0
SHD1_k127_2832617_7 TIGRFAM efflux transporter, RND family, MFP subunit K02005 - - 0.00000000001921 76.0
SHD1_k127_2842930_0 PFAM SMC domain protein K03546 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 307.0
SHD1_k127_2842930_1 PFAM Glycosyl transferase family 2 K14597 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001436 269.0
SHD1_k127_2842930_2 NapC/NirT cytochrome c family, N-terminal region K15876 - - 0.000000000000000000000000000000000000000008159 158.0
SHD1_k127_2842930_3 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.0000000000000004844 79.0
SHD1_k127_284326_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1071.0
SHD1_k127_284326_1 Phosphoglucose isomerase K01810 - 5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 416.0
SHD1_k127_284326_2 Cold shock protein domain K03704 - - 0.00000000000000000000000000002589 120.0
SHD1_k127_284326_3 - - - - 0.0000000000003789 74.0
SHD1_k127_2850181_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.3 1.397e-244 771.0
SHD1_k127_2850181_3 acyl-phosphate glycerol-3-phosphate acyltransferase activity K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000433 175.0
SHD1_k127_2850181_4 proteolysis K21140 - 3.13.1.6 0.000000000000000000002817 98.0
SHD1_k127_2865546_0 DEAD DEAH box helicase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 466.0
SHD1_k127_2865546_1 PFAM Phosphoribosyl transferase domain K07100 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000295 267.0
SHD1_k127_2865546_2 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004237 252.0
SHD1_k127_2898751_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000009282 154.0
SHD1_k127_2898751_1 Cupin domain - - - 0.00000000000000000000000000000002044 130.0
SHD1_k127_2905859_0 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile K01241 - 3.2.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 402.0
SHD1_k127_2905859_1 Metalloenzyme superfamily - - - 0.0000000000000000000000000000000000000000000000000005299 197.0
SHD1_k127_2905859_2 PFAM FecR protein - - - 0.0000004662 57.0
SHD1_k127_2906019_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733,K22010 - 4.2.3.1 8.231e-220 694.0
SHD1_k127_2906019_1 carbohydrate transport K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 494.0
SHD1_k127_2906019_2 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 443.0
SHD1_k127_2906019_3 transmembrane transport K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17242,K17316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 369.0
SHD1_k127_2906019_4 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005128 336.0
SHD1_k127_2906019_5 helix_turn _helix lactose operon repressor K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005069 296.0
SHD1_k127_2906019_6 metal-dependent phosphohydrolase, HD sub domain - - - 0.0000000000000000000000000000000000000000000000000002549 211.0
SHD1_k127_2906019_7 PFAM response regulator receiver K11443 - - 0.0000000000000000000000000000000000000009194 151.0
SHD1_k127_2909118_0 PHP domain protein K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000637 599.0
SHD1_k127_2909118_1 PFAM Methyltransferase type 12 - - - 0.0000000000000000000000000000000000000000000000000000003654 198.0
SHD1_k127_2909118_2 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000001306 164.0
SHD1_k127_2918224_0 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 319.0
SHD1_k127_2918224_1 PFAM DNA methylase N-4 N-6 domain protein K00571,K07316 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000002536 221.0
SHD1_k127_2925995_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 4.275e-194 614.0
SHD1_k127_2925995_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0000000000000000000000000000000000000000000000000000125 192.0
SHD1_k127_2925995_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000001444 150.0
SHD1_k127_2925995_3 Protein of unknown function (DUF448) K07742 - - 0.00000000000000000000000000000002469 128.0
SHD1_k127_2925995_4 PFAM phosphoesterase, RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.000002042 52.0
SHD1_k127_2940424_0 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000001314 222.0
SHD1_k127_2940424_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000004662 233.0
SHD1_k127_2940424_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000002355 169.0
SHD1_k127_2940424_3 Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 0.00000000000000000000001931 116.0
SHD1_k127_2961642_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 494.0
SHD1_k127_2961642_1 Phosphoribosyl transferase domain K07101 - - 0.000000000000000000000000000000000000000000000000000000000000000000007166 241.0
SHD1_k127_2961642_2 response to abiotic stimulus - - - 0.0000000000000000000006502 102.0
SHD1_k127_3011421_0 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002132 296.0
SHD1_k127_3011421_1 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003977 284.0
SHD1_k127_3011421_2 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003765 254.0
SHD1_k127_3011421_3 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000002542 146.0
SHD1_k127_3011421_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000007897 127.0
SHD1_k127_3023853_0 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 573.0
SHD1_k127_3023853_1 protein histidine kinase activity - - - 0.00000000004715 71.0
SHD1_k127_3030777_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 587.0
SHD1_k127_3030777_1 DNA restriction-modification system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 501.0
SHD1_k127_3031933_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000008357 226.0
SHD1_k127_3031933_1 MafB19-like deaminase K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000003744 210.0
SHD1_k127_3031933_2 Transcriptional regulator - - - 0.00000000000000001453 91.0
SHD1_k127_3031933_3 PspC domain K03973 - - 0.00000000002067 66.0
SHD1_k127_3031933_4 Iron-sulphur cluster assembly - GO:0003674,GO:0004857,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0030234,GO:0031163,GO:0043086,GO:0043167,GO:0043169,GO:0044085,GO:0044092,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050790,GO:0051186,GO:0065007,GO:0065009,GO:0071840,GO:0098772 - 0.000000009947 58.0
SHD1_k127_3032297_0 ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002995 299.0
SHD1_k127_3032297_1 ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003894 263.0
SHD1_k127_3032297_2 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004918 259.0
SHD1_k127_3032297_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000345 232.0
SHD1_k127_3032297_4 TIGRFAM uracil-DNA glycosylase, family 4 K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000001846 206.0
SHD1_k127_3032297_5 Phosphoribosyl transferase domain K07101 - - 0.000000000000000000000000000000001288 134.0
SHD1_k127_3032297_6 Belongs to the UPF0758 family K03630 - - 0.000000000000000002238 87.0
SHD1_k127_3035389_0 PFAM Shikimate quinate 5-dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 359.0
SHD1_k127_3035389_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000936 329.0
SHD1_k127_3035389_2 molybdenum cofactor guanylyltransferase activity K03752,K13818 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.77 0.00000000000000000000000000000000000000000000000000001151 200.0
SHD1_k127_3035389_3 phosphatidate phosphatase activity K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.000000000000000000000000000000000000001679 154.0
SHD1_k127_3035389_4 DinB superfamily - - - 0.000000007639 64.0
SHD1_k127_3046683_0 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 434.0
SHD1_k127_3046683_1 Peptidase_C39 like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 323.0
SHD1_k127_3046683_2 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000001898 203.0
SHD1_k127_3068216_0 PFAM Dak phosphatase K07030 - - 4.836e-219 692.0
SHD1_k127_3068216_1 GHMP kinases N terminal domain K01597 - 4.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004611 379.0
SHD1_k127_3068216_2 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 312.0
SHD1_k127_3068216_3 Asp23 family, cell envelope-related function - - - 0.000000000000000000000000000000009094 134.0
SHD1_k127_3068216_4 ribosomal protein L28 K02902 - - 0.00000000000000000004149 92.0
SHD1_k127_3082189_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 359.0
SHD1_k127_3082189_1 PBP superfamily domain K05772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006432 311.0
SHD1_k127_3082189_10 - - - - 0.000000000000001597 81.0
SHD1_k127_3082189_2 Bacterial extracellular solute-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000016 250.0
SHD1_k127_3082189_3 Binding-protein-dependent transport system inner membrane component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000000000004988 242.0
SHD1_k127_3082189_4 Binding-protein-dependent transport system inner membrane component K05773 - - 0.0000000000000000000000000000000000000000000000000000000000007115 214.0
SHD1_k127_3082189_5 TIGRFAM molybdenum cofactor synthesis K03750,K07219 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000008483 199.0
SHD1_k127_3082189_6 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.000000000000000000000000000000008811 139.0
SHD1_k127_3082189_7 SnoaL-like domain - - - 0.000000000000000000000000000005564 123.0
SHD1_k127_3082189_8 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000009699 119.0
SHD1_k127_3082189_9 Transcriptional regulator PadR-like family - - - 0.0000000000000000000002275 102.0
SHD1_k127_3086414_0 aldolase class II K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 505.0
SHD1_k127_3086414_1 Chalcone and stilbene synthases, C-terminal domain K16167,K19580 - 2.3.1.233 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 359.0
SHD1_k127_3086414_2 PFAM Isoprenylcysteine carboxyl methyltransferase K16168 - - 0.00000000000000000000000000000000000000004954 158.0
SHD1_k127_3097706_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 413.0
SHD1_k127_3097706_1 succinate dehydrogenase K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000002524 173.0
SHD1_k127_3097706_2 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000002856 158.0
SHD1_k127_3129304_0 Bacterial extracellular solute-binding protein K10117 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008327 503.0
SHD1_k127_3129304_1 helix_turn _helix lactose operon repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 398.0
SHD1_k127_3129304_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000005039 162.0
SHD1_k127_3129304_3 PFAM Cyclic nucleotide-binding domain - - - 0.00000000002269 66.0
SHD1_k127_3135770_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 513.0
SHD1_k127_3135770_1 pfkB family carbohydrate kinase K00852 - 2.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000002661 271.0
SHD1_k127_3135770_2 TIGRFAM conserved - - - 0.000000000000000000000000000000000000000000000000000006082 193.0
SHD1_k127_3135996_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632 584.0
SHD1_k127_3135996_1 This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria K19223 - - 0.000006847 58.0
SHD1_k127_3137672_0 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 605.0
SHD1_k127_3137672_1 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 403.0
SHD1_k127_3137672_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000002078 108.0
SHD1_k127_3141905_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006905 544.0
SHD1_k127_3141905_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 501.0
SHD1_k127_3141905_2 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 467.0
SHD1_k127_3141905_3 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000009438 223.0
SHD1_k127_3141905_4 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000000000000000000008016 219.0
SHD1_k127_3141905_5 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000005895 207.0
SHD1_k127_3141905_6 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000001799 108.0
SHD1_k127_3149510_0 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 481.0
SHD1_k127_3149510_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 321.0
SHD1_k127_3149510_2 ATP:ADP antiporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006407 321.0
SHD1_k127_3149510_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000001469 256.0
SHD1_k127_3149510_4 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000004076 213.0
SHD1_k127_3149510_5 Gaf domain K03406 - - 0.00000000000000000000000000000000000000000000000000006628 197.0
SHD1_k127_3149510_6 transferase activity, transferring glycosyl groups K21369 - 2.4.1.270 0.0000000000000000000000000000000000000000000509 175.0
SHD1_k127_3149510_7 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.000000000000000000000000000006999 135.0
SHD1_k127_3149510_8 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000009092 123.0
SHD1_k127_3167191_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 4.685e-266 829.0
SHD1_k127_3167191_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 430.0
SHD1_k127_3167191_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00338,K03615 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001956 273.0
SHD1_k127_3175207_0 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 570.0
SHD1_k127_3176833_0 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 395.0
SHD1_k127_3176833_1 PFAM ABC transporter related K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000004904 260.0
SHD1_k127_3176833_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000006938 87.0
SHD1_k127_3178964_0 DNA methylase - - - 0.0000000000000000000000000000000000000000000000000000000000000001258 232.0
SHD1_k127_3178964_1 PFAM NUDIX hydrolase - - - 0.000000000000000000000000000000000000000004691 158.0
SHD1_k127_3178964_2 PFAM peptidase - - - 0.00000000000000000000000000003564 128.0
SHD1_k127_3188461_0 Polyphosphate kinase 2 (PPK2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 371.0
SHD1_k127_3188461_1 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 370.0
SHD1_k127_3188461_2 methylglyoxal synthase activity K01734 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0008150,GO:0008152,GO:0008929,GO:0009058,GO:0009438,GO:0009987,GO:0016829,GO:0016835,GO:0016838,GO:0019242,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0071704,GO:1901576 4.2.3.3 0.000000000000000000000000000000000000000000000000000000000000000000008865 236.0
SHD1_k127_3188461_3 - - - - 0.00000000000000003644 83.0
SHD1_k127_3188461_4 Domain of unknown function DUF11 - - - 0.00000008033 55.0
SHD1_k127_3211214_0 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 449.0
SHD1_k127_3211214_1 iron-sulfur cluster assembly K02426,K07125 - - 0.00000000000000000000000000000000000000003443 158.0
SHD1_k127_3211214_2 YCII-related domain - - - 0.00000000000000000000000000000004806 127.0
SHD1_k127_3211214_3 MFS_1 like family - - - 0.0000000000000000004286 93.0
SHD1_k127_3220947_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004802 546.0
SHD1_k127_3220947_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006366 387.0
SHD1_k127_3220947_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000174 257.0
SHD1_k127_3220947_3 Maltose permease K05820,K07112 - - 0.0000000000000000002855 100.0
SHD1_k127_3223492_0 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000005893 260.0
SHD1_k127_3223492_1 - - - - 0.00000000000000000000000000000000000000000118 161.0
SHD1_k127_3225790_0 succinate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003248 292.0
SHD1_k127_3225790_1 - - - - 0.00000000000000000000000000000000000000000000000000000002426 203.0
SHD1_k127_3225790_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins - - - 0.0000000000000000000000000000000000000000009503 171.0
SHD1_k127_3225790_3 Thioredoxin - - - 0.00000000000000000000000000000000007179 141.0
SHD1_k127_3225790_4 FtsH Extracellular K08956 GO:0000166,GO:0001302,GO:0002181,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005745,GO:0006412,GO:0006465,GO:0006508,GO:0006518,GO:0006605,GO:0006626,GO:0006807,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007568,GO:0007569,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016462,GO:0016485,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017038,GO:0017076,GO:0017111,GO:0019538,GO:0019866,GO:0030150,GO:0030554,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031975,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032592,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042886,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045041,GO:0045184,GO:0046907,GO:0048869,GO:0051179,GO:0051234,GO:0051604,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070011,GO:0070585,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072655,GO:0097002,GO:0097159,GO:0097367,GO:0098573,GO:0098796,GO:0098798,GO:0098800,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1905368,GO:1990542 - 0.00000000008397 64.0
SHD1_k127_3225790_5 Bacterial transcriptional activator domain - - - 0.00004554 55.0
SHD1_k127_3225790_6 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00005141 54.0
SHD1_k127_322697_0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 1.481e-264 832.0
SHD1_k127_3232925_0 PFAM glycosyl transferase group 1 K15521 - 2.4.1.250 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009275 528.0
SHD1_k127_3232925_1 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000726 437.0
SHD1_k127_3232925_2 YCII-related domain - - - 0.00000000000000000000000002812 111.0
SHD1_k127_3232925_4 NYN domain - - - 0.0000005201 52.0
SHD1_k127_3233651_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1570.0
SHD1_k127_3233651_1 Melibiase K07407 - 3.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 502.0
SHD1_k127_3233651_2 - - - - 0.0000000000000003815 79.0
SHD1_k127_324131_0 PFAM Abortive infection protein - - - 0.000000000000000000000000000000000000005975 157.0
SHD1_k127_324131_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000008402 114.0
SHD1_k127_324131_2 Acetyltransferase (GNAT) family - - - 0.0000000000000000008479 89.0
SHD1_k127_324131_3 Domain of unknown function (DUF4111) - - - 0.000000000007236 75.0
SHD1_k127_324131_4 Acetyltransferase (GNAT) domain K00619 GO:0003674,GO:0003824,GO:0004042,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016043,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0040007,GO:0042450,GO:0042802,GO:0042803,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1 0.000008448 53.0
SHD1_k127_3250089_0 PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 515.0
SHD1_k127_3250089_1 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004099 400.0
SHD1_k127_3250089_2 Class ii aldolase K01628,K01629 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0008994,GO:0009056,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0019321,GO:0019323,GO:0042802,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0071704,GO:1901575 4.1.2.17,4.1.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006401 276.0
SHD1_k127_3251481_0 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 294.0
SHD1_k127_3251481_1 Responsible for synthesis of pseudouridine from uracil K06177 - 5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000134 190.0
SHD1_k127_3251481_2 - - - - 0.00000000000000000000000000000000000000001007 156.0
SHD1_k127_3254733_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 608.0
SHD1_k127_3254733_1 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 490.0
SHD1_k127_3254733_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 284.0
SHD1_k127_3254733_3 response regulator K07689 - - 0.000000000000002582 82.0
SHD1_k127_3267255_0 PFAM VWA containing CoxE family protein K07161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 555.0
SHD1_k127_3267255_1 PFAM ATPase associated with various cellular activities, AAA_5 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 467.0
SHD1_k127_3267255_2 Flavin-binding monooxygenase-like K07222,K18277 - 1.14.13.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008898 413.0
SHD1_k127_3267255_3 Bacitracin ABC transporter, ATP-binding protein K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 285.0
SHD1_k127_3267255_4 DNA-binding transcription factor activity K03892 - - 0.0000000000000000000000007176 116.0
SHD1_k127_3267255_5 HD domain K07814 - - 0.000000000000000000001231 100.0
SHD1_k127_3287132_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 5.889e-211 662.0
SHD1_k127_3287132_2 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000006361 145.0
SHD1_k127_3293960_0 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008326 298.0
SHD1_k127_3293960_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.000000000000000000000000000000000000000000007083 171.0
SHD1_k127_3293960_2 Sugar-specific transcriptional regulator TrmB - - - 0.000000000000000000000000000000000000000000008775 172.0
SHD1_k127_3293960_3 DGC domain - - - 0.000000000000000000000000000000000001906 147.0
SHD1_k127_3293960_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000001534 139.0
SHD1_k127_3293960_5 DGC domain - - - 0.00000000000000000000000001547 114.0
SHD1_k127_3293960_6 OsmC-like protein - - - 0.000000000000000000000006676 104.0
SHD1_k127_3293960_7 DNA-binding transcription factor activity - - - 0.000000000000000000007252 97.0
SHD1_k127_3311498_0 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000001632 213.0
SHD1_k127_3311498_1 COG0437 Fe-S-cluster-containing hydrogenase components 1 K00184 - - 0.00000000000000000000000000000000000001143 148.0
SHD1_k127_3311498_2 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000174 137.0
SHD1_k127_3311498_3 4Fe-4S ferredoxin iron-sulfur binding domain protein K08358 - - 0.0000000000000000002139 93.0
SHD1_k127_3312745_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000945 355.0
SHD1_k127_3312745_1 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related K01295 - 3.4.17.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 298.0
SHD1_k127_3312745_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000001141 230.0
SHD1_k127_3312745_3 23S rRNA-intervening sequence protein - - - 0.0000000000000000000002997 101.0
SHD1_k127_3350496_1 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003654 280.0
SHD1_k127_3350496_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000001033 127.0
SHD1_k127_3352653_0 Leucyl aminopeptidase (Aminopeptidase T) K19689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004794 395.0
SHD1_k127_3352653_1 PFAM major facilitator superfamily MFS_1 K08162 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006996 351.0
SHD1_k127_3352653_2 PFAM isocitrate lyase and phosphorylmutase K01637 - 4.1.3.1 0.000000000000000000004151 94.0
SHD1_k127_3356008_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 2.396e-271 845.0
SHD1_k127_3356008_1 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 391.0
SHD1_k127_3358981_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 327.0
SHD1_k127_3358981_1 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005949 291.0
SHD1_k127_3358981_2 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006121 250.0
SHD1_k127_3358981_3 histidine kinase A domain protein K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000003221 255.0
SHD1_k127_3358981_5 secretion protein HlyD K03543 - - 0.0000000008877 71.0
SHD1_k127_3361159_0 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 407.0
SHD1_k127_3361159_1 - K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000195 232.0
SHD1_k127_3361159_2 - K01992 - - 0.000000000000000000000003199 109.0
SHD1_k127_3377788_0 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000002072 165.0
SHD1_k127_3383499_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003688 311.0
SHD1_k127_3383499_1 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000002649 247.0
SHD1_k127_3384603_0 3-deoxy-manno-octulosonate-8-phosphatase activity K00983,K03270 - 2.7.7.43,3.1.3.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 484.0
SHD1_k127_3384603_1 NeuB family K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 430.0
SHD1_k127_3384603_2 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 347.0
SHD1_k127_3384603_3 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.00000000000000000000000000000000000000000000000000000000000005734 221.0
SHD1_k127_3384603_4 PFAM Phosphoglycerate mutase family - - - 0.0000000000000000000000000000000000000000000000000000002833 200.0
SHD1_k127_3384603_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000005884 136.0
SHD1_k127_339665_0 COGs COG4591 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 327.0
SHD1_k127_339665_1 PFAM secretion protein HlyD family protein K01993 - - 0.00000000000000000000000000000000003787 147.0
SHD1_k127_3411334_0 PFAM alpha-L-arabinofuranosidase domain protein K01209 - 3.2.1.55 1.167e-241 755.0
SHD1_k127_3411334_1 Glycosyl hydrolases family 31 K01811 - 3.2.1.177 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 515.0
SHD1_k127_3411334_2 Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system K10441 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 463.0
SHD1_k127_3411334_3 COGs COG1172 Ribose xylose arabinose galactoside ABC-type transport systems permease components K10440 - - 0.0000000000000000000000000000000000000000000000003506 185.0
SHD1_k127_3413272_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1165.0
SHD1_k127_3413272_1 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 332.0
SHD1_k127_3413272_2 Catechol dioxygenase N terminus K03381 - 1.13.11.1 0.000000000000000000000000000000000000000000000000000000002293 208.0
SHD1_k127_3413272_4 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000001333 186.0
SHD1_k127_3413272_5 metallopeptidase activity K20276 - - 0.00000000000000000001779 101.0
SHD1_k127_3413272_6 Polyketide cyclase / dehydrase and lipid transport - - - 0.000002522 55.0
SHD1_k127_341462_0 PFAM type II secretion system protein E K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 615.0
SHD1_k127_341462_1 Transcriptional regulatory protein, C terminal K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 335.0
SHD1_k127_341462_10 Pilus assembly protein TadZ N-terminal K02282 - - 0.0000000000000009606 89.0
SHD1_k127_341462_11 4-vinyl reductase, 4VR K07013,K17763 - - 0.00000000000007016 81.0
SHD1_k127_341462_12 V4R K07013 - - 0.0007289 49.0
SHD1_k127_341462_2 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001419 284.0
SHD1_k127_341462_3 Lysophospholipase K01048 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000001212 237.0
SHD1_k127_341462_4 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000005066 168.0
SHD1_k127_341462_5 sequence-specific DNA binding - - - 0.000000000000000000000000000000000000003535 154.0
SHD1_k127_341462_6 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000001967 153.0
SHD1_k127_341462_7 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000006509 147.0
SHD1_k127_341462_8 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000001198 132.0
SHD1_k127_341462_9 - - - - 0.0000000000000000000001128 101.0
SHD1_k127_34183_0 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 299.0
SHD1_k127_34183_1 GGDEF domain K13069 - 2.7.7.65 0.00000000000000000000000000000000000000000003074 175.0
SHD1_k127_34183_2 ABC-2 type transporter K01992 - - 0.00000000000000000000000006778 117.0
SHD1_k127_34183_3 CAAX protease self-immunity K07052 - - 0.0000000000000000000000009906 114.0
SHD1_k127_34183_4 ABC-2 type transporter K01992 - - 0.00000000000000005975 92.0
SHD1_k127_3420257_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 1.756e-233 731.0
SHD1_k127_3420257_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 490.0
SHD1_k127_3420257_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000001086 245.0
SHD1_k127_3420257_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.000000000000000000000000003175 115.0
SHD1_k127_3420257_4 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000001603 88.0
SHD1_k127_3420257_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000002527 78.0
SHD1_k127_3427854_0 penicillin amidase K01434 - 3.5.1.11 1.096e-305 959.0
SHD1_k127_3427854_1 SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001673 267.0
SHD1_k127_3427854_2 - - - - 0.00000000000004053 77.0
SHD1_k127_3429375_0 DNA-templated transcription, initiation K03088 - - 0.00000000000000009618 87.0
SHD1_k127_3429375_1 Peptidase family M23 K08642 - - 0.0000000001023 75.0
SHD1_k127_3429375_2 Belongs to the peptidase S8 family K01361,K08652,K14647 - 3.4.21.110,3.4.21.96 0.00007903 56.0
SHD1_k127_3429375_3 Protein of unknown function (DUF1553) - - - 0.0003385 53.0
SHD1_k127_3435857_0 Transglycosylase associated protein - - - 0.00000000000000000000004912 100.0
SHD1_k127_3435857_1 YGGT family - - - 0.00000000000003962 78.0
SHD1_k127_3435857_2 UPF0761 membrane protein K07058 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000007749 82.0
SHD1_k127_3435857_3 Belongs to the UPF0337 (CsbD) family - - - 0.000000002078 65.0
SHD1_k127_3435857_4 Response regulator receiver domain protein - - - 0.00000009256 58.0
SHD1_k127_3435857_5 YtxH-like protein - - - 0.0003006 46.0
SHD1_k127_3436373_0 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000004286 235.0
SHD1_k127_3436373_1 Trypsin-like peptidase domain K04771 - 3.4.21.107 0.00000000000000000000000000000000000001571 149.0
SHD1_k127_3436373_2 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000001195 149.0
SHD1_k127_3436373_3 F420H(2)-dependent quinone reductase - GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0030312,GO:0031406,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070967,GO:0071944,GO:0097159,GO:0097367,GO:1901363 - 0.0000000000000000000000000000586 120.0
SHD1_k127_3436373_4 - - - - 0.00000000000000000000000006715 111.0
SHD1_k127_3436373_5 pyridoxamine 5'-phosphate K05558,K07005 - - 0.00000008825 55.0
SHD1_k127_3436373_6 Protein of unknown function DUF58 - - - 0.000001382 56.0
SHD1_k127_3465877_0 PFAM Xylose isomerase domain protein TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008418 550.0
SHD1_k127_3465877_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K19969 - 4.2.3.152 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 488.0
SHD1_k127_3465877_2 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001249 273.0
SHD1_k127_3465877_3 S-ribosylhomocysteine lyase activity K07173 GO:0008150,GO:0043900,GO:0043901,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0065007,GO:1900190,GO:1900191,GO:1900231,GO:1900232 4.4.1.21 0.000000000000000000000000000000000000000003904 157.0
SHD1_k127_3465877_4 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000000003131 105.0
SHD1_k127_3465877_5 Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) K07173 - 4.4.1.21 0.000006361 48.0
SHD1_k127_3473672_0 Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000001204 228.0
SHD1_k127_3473672_1 PFAM Abortive infection protein - - - 0.000000000000000000000000000000006293 138.0
SHD1_k127_3473672_3 CAAX protease self-immunity - - - 0.00000000000000000002054 96.0
SHD1_k127_3473672_4 CAAX protease self-immunity - - - 0.00001259 51.0
SHD1_k127_347664_0 SMART ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 451.0
SHD1_k127_347664_1 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000000000000000000000000000005919 203.0
SHD1_k127_347664_2 histidine kinase A domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000002378 198.0
SHD1_k127_3479460_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006457 425.0
SHD1_k127_3492036_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 4.717e-316 983.0
SHD1_k127_3492036_1 Succinyl-CoA ligase like flavodoxin domain K09181 - - 4.902e-241 756.0
SHD1_k127_3492036_2 Hep Hag repeat protein - - - 0.000000000000000000000000000000003124 134.0
SHD1_k127_3498104_0 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 5.139e-240 749.0
SHD1_k127_3498104_1 PhoQ Sensor - - - 1.425e-216 697.0
SHD1_k127_3498104_2 LysE type translocator - - - 0.00000000000000000000000000000000000000000002355 169.0
SHD1_k127_3498104_3 phosphorelay signal transduction system - GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000004313 143.0
SHD1_k127_3498104_4 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00003,K00982,K00990,K06950,K15371 GO:0000820,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006521,GO:0008150,GO:0008882,GO:0010565,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0030312,GO:0031323,GO:0033238,GO:0040007,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0060359,GO:0062012,GO:0065007,GO:0070566,GO:0071944,GO:0080090,GO:1901698 1.1.1.3,1.4.1.2,2.7.7.42,2.7.7.59,2.7.7.89 0.000000000000000000005591 99.0
SHD1_k127_3509991_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000004068 196.0
SHD1_k127_3509991_1 PHP domain protein K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000001862 167.0
SHD1_k127_3509991_2 COG1278 Cold shock proteins K03704 - - 0.00000000000000000001138 97.0
SHD1_k127_3509991_3 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000008049 69.0
SHD1_k127_3518915_0 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 437.0
SHD1_k127_3518915_1 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 353.0
SHD1_k127_3518915_2 Acyltransferase family - - - 0.0000000000000000000000000000000000000000237 168.0
SHD1_k127_3518915_3 Cold shock K03704 - - 0.000000000000000000000000002013 112.0
SHD1_k127_3520309_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 374.0
SHD1_k127_3520309_1 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000742 269.0
SHD1_k127_3520309_2 TIGRFAM competence protein ComEA helix-hairpin-helix K02237 - - 0.000000000000000000000000000000000009912 142.0
SHD1_k127_3520309_3 Acetyltransferase (GNAT) domain - - - 0.0000000000752 68.0
SHD1_k127_3520309_4 PFAM Tetratricopeptide TPR_4 - - - 0.00001416 56.0
SHD1_k127_3522376_0 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 385.0
SHD1_k127_3522376_1 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 344.0
SHD1_k127_3522376_2 Phospholipid methyltransferase - - - 0.000000000000000000000000000000000000000000000000003071 187.0
SHD1_k127_3522376_3 Transcriptional regulator - - - 0.000000000000000000000000007841 119.0
SHD1_k127_3522376_4 PR domain containing 9 K20796 - 2.1.1.43 0.000006327 51.0
SHD1_k127_3535038_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007444 470.0
SHD1_k127_3535038_1 modification enzyme, MiaB family K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000002572 195.0
SHD1_k127_3535038_2 serine threonine protein kinase - - - 0.000000000000000004948 93.0
SHD1_k127_3535038_3 Tetratricopeptide repeat - - - 0.0000001211 64.0
SHD1_k127_3537746_0 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 500.0
SHD1_k127_3537746_1 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 454.0
SHD1_k127_3537746_2 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005673 389.0
SHD1_k127_3537746_3 TIGRFAM alpha-glucan - - - 0.000000000000000000000000000000000000002001 151.0
SHD1_k127_3537746_4 Diguanylate cyclase with PAS PAC and GAF sensors - - - 0.000000000000000015 85.0
SHD1_k127_3582005_0 amino acid K03294 - - 3.72e-196 621.0
SHD1_k127_3582005_1 metallophosphoesterase K07096,K07496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004398 353.0
SHD1_k127_3582005_2 phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000135 276.0
SHD1_k127_3582745_0 oxidoreductase activity K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000002157 226.0
SHD1_k127_3582745_1 - - - - 0.0000000000000000000000000001378 117.0
SHD1_k127_3582745_2 Photosynthesis system II assembly factor YCF48 - - - 0.000000000003899 76.0
SHD1_k127_3582745_3 SdpI/YhfL protein family - - - 0.0000002574 57.0
SHD1_k127_3582745_4 sequence-specific DNA binding - - - 0.00002151 56.0
SHD1_k127_3582745_5 Domain in cystathionine beta-synthase and other proteins. K07448 - - 0.0004185 47.0
SHD1_k127_3587017_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009564 473.0
SHD1_k127_3587017_1 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000009677 204.0
SHD1_k127_3587017_2 Ribosomal protein L11 methyltransferase (PrmA) K05929 - 2.1.1.103 0.0000000000000000000000000000000000000009926 156.0
SHD1_k127_3587017_3 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000001755 145.0
SHD1_k127_3587017_4 - - - - 0.000000000000000005663 93.0
SHD1_k127_3587017_5 AntiSigma factor - - - 0.000888 49.0
SHD1_k127_3593290_0 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 587.0
SHD1_k127_3593290_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005699 245.0
SHD1_k127_3593290_2 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000001591 228.0
SHD1_k127_3593290_3 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.000000000000000000000000000000000000001099 154.0
SHD1_k127_3593290_4 - - - - 0.000003565 57.0
SHD1_k127_359470_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 6.976e-245 781.0
SHD1_k127_359470_1 Belongs to the MEMO1 family K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 329.0
SHD1_k127_359470_2 sigma-70 region 2 domain protein K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000002862 240.0
SHD1_k127_359470_3 Nudix hydrolase - - - 0.0000000000000000000000000000000000000000000000000000002339 198.0
SHD1_k127_359470_5 AntiSigma factor - - - 0.0000000000000828 81.0
SHD1_k127_3607886_0 phosphorelay sensor kinase activity K07638,K07673,K21009 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006299 336.0
SHD1_k127_3607886_1 phosphorelay sensor kinase activity K07638,K07673,K21009 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 324.0
SHD1_k127_3607886_2 PFAM Cobyrinic acid a,c-diamide synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002513 281.0
SHD1_k127_3607886_3 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000002248 140.0
SHD1_k127_3608403_0 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 308.0
SHD1_k127_3608403_1 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 297.0
SHD1_k127_3608403_2 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000005655 235.0
SHD1_k127_3628842_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1148.0
SHD1_k127_3635426_0 Hsp70 protein K04046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001046 292.0
SHD1_k127_3635426_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000001987 226.0
SHD1_k127_3635426_2 PFAM helix-turn-helix- domain containing protein AraC type - - - 0.000000000000000000000000000000006967 132.0
SHD1_k127_3635426_3 Signal transduction histidine kinase - - - 0.000004012 60.0
SHD1_k127_3659525_0 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005269 507.0
SHD1_k127_3659525_1 PFAM Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 497.0
SHD1_k127_3659525_2 MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 394.0
SHD1_k127_3659525_3 PFAM regulatory protein, MerR K22491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004899 347.0
SHD1_k127_3659525_4 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005262 271.0
SHD1_k127_3659525_5 PFAM Aminotransferase class I and II K14155 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000001802 246.0
SHD1_k127_3659525_6 PFAM GDSL-like Lipase Acylhydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000001144 219.0
SHD1_k127_3659525_7 Putative zincin peptidase - - - 0.000000000000000000000000000000000000000000001321 170.0
SHD1_k127_3659525_8 Periplasmic binding protein-like domain - - - 0.000000000000000000000000000000003878 131.0
SHD1_k127_3659525_9 AI-2E family transporter - - - 0.00000000003053 76.0
SHD1_k127_3661894_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1211.0
SHD1_k127_3661894_1 COG0739 Membrane proteins related to metalloendopeptidases K08642 - - 0.000000000000003525 82.0
SHD1_k127_3661894_2 FHA domain - - - 0.0000003902 61.0
SHD1_k127_3661894_3 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.0001122 55.0
SHD1_k127_3679906_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 549.0
SHD1_k127_3679906_1 methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000139 253.0
SHD1_k127_3679906_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000002693 246.0
SHD1_k127_3679906_3 Belongs to the sigma-70 factor family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000001204 243.0
SHD1_k127_3680201_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 3.118e-254 801.0
SHD1_k127_3680201_1 PFAM cytochrome c oxidase, subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000004079 235.0
SHD1_k127_3680201_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000001869 221.0
SHD1_k127_3680201_3 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275,K17223 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.0000000000000000000000000000000000000000000000000000001715 207.0
SHD1_k127_3680201_5 Cytochrome c - - - 0.0000000000000000000000002128 110.0
SHD1_k127_3680201_6 SURF1 family K14998 - - 0.00000000000000000000001046 106.0
SHD1_k127_3680718_0 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 416.0
SHD1_k127_3680718_1 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008429 394.0
SHD1_k127_3680718_2 Lysin motif - - - 0.000000000000000000000000000000000000000000000000000000000000000002287 233.0
SHD1_k127_3680718_3 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000001048 99.0
SHD1_k127_3680718_4 Cyclic nucleotide-binding protein - - - 0.00000006927 63.0
SHD1_k127_3681330_0 Methyltransferase, chemotaxis proteins K00575,K13924 - 2.1.1.80,3.1.1.61 1.555e-252 795.0
SHD1_k127_3681330_1 PFAM Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 396.0
SHD1_k127_3681330_10 COG3344 Retron-type reverse transcriptase - - - 0.0004742 44.0
SHD1_k127_3681330_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000008394 201.0
SHD1_k127_3681330_3 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000005155 106.0
SHD1_k127_3681330_4 Histidine kinase K02484 - 2.7.13.3 0.00000000000000001034 86.0
SHD1_k127_3681330_5 reverse transcriptase - - - 0.0000000000000002071 81.0
SHD1_k127_3681330_6 PFAM IS1 transposase K07480 - - 0.0000000000000316 75.0
SHD1_k127_3681330_7 PFAM alpha beta hydrolase fold K00433 - 1.11.1.10 0.000000000004152 66.0
SHD1_k127_3681330_8 - - - - 0.000000000009235 74.0
SHD1_k127_3685144_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 4.612e-211 664.0
SHD1_k127_3685144_2 Beta-lactamase - - - 0.0000000000001669 80.0
SHD1_k127_3685144_3 - - - - 0.000000000001157 74.0
SHD1_k127_3685144_4 Belongs to the peptidase S26 family - - - 0.000000000002494 76.0
SHD1_k127_3693256_0 Aldo/keto reductase family K06222 - 1.1.1.346 0.0000000000000000000000000000000000000000000000000001113 196.0
SHD1_k127_3693256_1 Acyl-transferase - - - 0.000000000000000000000000000000000000000000000000001269 194.0
SHD1_k127_3693256_2 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000006243 95.0
SHD1_k127_3706002_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1059.0
SHD1_k127_3706002_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005787 538.0
SHD1_k127_3706002_2 FGGY family of carbohydrate kinases, N-terminal domain K00880 - 2.7.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 507.0
SHD1_k127_3706002_3 ATP-dependent transcriptional regulator, MalT-like, LuxR family K03556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 426.0
SHD1_k127_3706002_4 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 313.0
SHD1_k127_3706002_5 PFAM ketose-bisphosphate aldolase, class-II K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000004561 250.0
SHD1_k127_3706002_6 6-phospho 3-hexuloisomerase K08094 - 5.3.1.27 0.000000000000000000000000000000000000000188 157.0
SHD1_k127_3706002_7 transcriptional regulator K13641 - - 0.0000000000000000000000000000000000000001983 153.0
SHD1_k127_3706002_8 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000008477 134.0
SHD1_k127_3706002_9 arsR family K21903 - - 0.000000000000000004745 89.0
SHD1_k127_3706596_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 3.464e-229 721.0
SHD1_k127_3706596_1 COGs COG0601 ABC-type dipeptide oligopeptide nickel transport systems permease components K02033 - - 0.00000000000000000000000000000000000000000000000000000000000007703 226.0
SHD1_k127_3706596_2 Polynucleotide adenylyltransferase region K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000007097 211.0
SHD1_k127_3706596_3 PFAM Binding-protein-dependent transport system inner membrane component K02034,K15582 - - 0.00000000000000000000000000000000000000000000000004346 195.0
SHD1_k127_3706596_4 cytokinin biosynthetic process K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000001556 185.0
SHD1_k127_3706596_5 MazG-like family - - - 0.000000000000000000000000000000002942 132.0
SHD1_k127_3706596_7 Domain of unknown function (DUF4203) - - - 0.0000000000000000000000002639 112.0
SHD1_k127_3706596_8 Domain of unknown function (DUF4203) - - - 0.00000000009615 69.0
SHD1_k127_3710505_0 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 463.0
SHD1_k127_3710505_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000000002897 249.0
SHD1_k127_3710505_2 PFAM glycosyl transferase family 3 K00756 - 2.4.2.2 0.000000002251 59.0
SHD1_k127_3710505_3 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000004514 57.0
SHD1_k127_3713992_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 317.0
SHD1_k127_3713992_1 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 299.0
SHD1_k127_3713992_2 peroxiredoxin activity - - - 0.0000000000000000000000001148 113.0
SHD1_k127_3724750_0 Carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006859 461.0
SHD1_k127_3724750_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 297.0
SHD1_k127_3724750_2 pseudouridine synthase activity K06178,K06181,K06183 - 5.4.99.19,5.4.99.20,5.4.99.22 0.000000000000000000000000000000000000000000000000001259 205.0
SHD1_k127_3724750_3 - - - - 0.0000000000000000000000000000000000000003817 157.0
SHD1_k127_372966_0 COG0520 Selenocysteine lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 562.0
SHD1_k127_372966_1 Apoptosis-inducing factor, mitochondrion-associated, C-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 475.0
SHD1_k127_372966_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 443.0
SHD1_k127_372966_3 PFAM GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 290.0
SHD1_k127_372966_4 LysM domain - - - 0.00000000000000000000000000000000000000000000000001279 186.0
SHD1_k127_372966_5 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000003442 167.0
SHD1_k127_372966_6 - - - - 0.000000000000000000246 94.0
SHD1_k127_3741198_0 NUBPL iron-transfer P-loop NTPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 372.0
SHD1_k127_3741198_1 Transcriptional Coactivator p15 (PC4) - - - 0.000000000000000000000000000009202 119.0
SHD1_k127_3741198_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006950,GO:0006970,GO:0008150,GO:0009266,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000462 94.0
SHD1_k127_3741198_3 WD40 domain protein beta Propeller - - - 0.00000000000004293 85.0
SHD1_k127_3741198_4 overlaps another CDS with the same product name - - - 0.000000001729 65.0
SHD1_k127_3743293_0 Adenosine specific kinase K09129 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002524 262.0
SHD1_k127_3743293_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000008497 177.0
SHD1_k127_3743293_2 - - - - 0.000000000000000000000001 119.0
SHD1_k127_3743293_3 Pentapeptide repeats (9 copies) - - - 0.00000000000000000001646 106.0
SHD1_k127_3744675_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009879 242.0
SHD1_k127_3744675_1 Uncharacterized protein family UPF0029 K00560,K01271 - 2.1.1.45,3.4.13.9 0.000000000000000000000000000000000000000000000000000006408 196.0
SHD1_k127_3744675_2 - - - - 0.0000000000000000000000000000000002789 147.0
SHD1_k127_3744675_3 cellulose binding - - - 0.00000000002938 72.0
SHD1_k127_3744675_4 Two component transcriptional regulator, winged helix family K07659 - - 0.0002559 46.0
SHD1_k127_3749472_0 transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 582.0
SHD1_k127_3749472_1 Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 394.0
SHD1_k127_3751709_0 ATPases associated with a variety of cellular activities K03701 - - 6.021e-211 667.0
SHD1_k127_3751709_1 Peptidase family M28 K19701 - 3.4.11.10,3.4.11.6 0.000000000000000000000000000000000000000000000000000000000000000004153 240.0
SHD1_k127_3751709_2 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding - - - 0.0000000000000000000000000000000000000007635 153.0
SHD1_k127_3757836_0 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 487.0
SHD1_k127_3757836_1 cell redox homeostasis K01829,K03671 - 5.3.4.1 0.00000000000000000000000000000000002477 142.0
SHD1_k127_3757836_2 - - - - 0.0000000000000000000006793 104.0
SHD1_k127_3760540_0 6-phosphofructokinase activity K00850,K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 378.0
SHD1_k127_3760540_1 PFAM fumarate lyase K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000002008 181.0
SHD1_k127_3760540_2 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000004666 160.0
SHD1_k127_3760540_3 ABC transporter K06147 - - 0.0000000000000000000006636 96.0
SHD1_k127_376215_0 Restriction endonuclease K07448 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002488 283.0
SHD1_k127_376215_1 Staphylococcal nuclease homologues - - - 0.00000000000000000000003734 105.0
SHD1_k127_376215_2 Staphylococcal nuclease homologues - - - 0.000000000000002337 76.0
SHD1_k127_376215_3 Stage II sporulation protein M K06384 - - 0.00000000000001837 80.0
SHD1_k127_376215_4 COG0790 FOG TPR repeat, SEL1 subfamily - - - 0.000000389 53.0
SHD1_k127_3763713_0 SPFH domain-Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 511.0
SHD1_k127_3763713_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006821 289.0
SHD1_k127_3763713_2 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001802 275.0
SHD1_k127_3763713_3 XdhC Rossmann domain K07402 - - 0.0000000000000000007296 87.0
SHD1_k127_3763713_4 Mazg nucleotide pyrophosphohydrolase - - - 0.000000000001875 70.0
SHD1_k127_3765546_0 PFAM acyl-CoA dehydrogenase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 449.0
SHD1_k127_3765546_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.00000000000000000000000000000000000000000000000000578 203.0
SHD1_k127_3765546_2 Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE K06039,K07235 - - 0.0000000000000000000000000001574 119.0
SHD1_k127_3765546_3 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.00000000000000001538 94.0
SHD1_k127_3765546_4 Cytochrome C oxidase, cbb3-type, subunit III K19713 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016667,GO:0016669,GO:0050338,GO:0055114 1.8.2.2 0.0001141 55.0
SHD1_k127_376986_0 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 453.0
SHD1_k127_376986_1 AzlC protein - - - 0.0000000000000000000000000000000000000000000000000000000000000663 220.0
SHD1_k127_376986_2 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000001322 207.0
SHD1_k127_3771074_0 PFAM Transketolase central region K00162,K11381,K21417 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008831 542.0
SHD1_k127_3771074_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 452.0
SHD1_k127_3771074_2 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 314.0
SHD1_k127_3771074_3 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000004734 250.0
SHD1_k127_3771074_5 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000001246 188.0
SHD1_k127_3771074_6 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000006198 171.0
SHD1_k127_3771074_7 PBS lyase HEAT domain protein repeat-containing protein - - - 0.00000000000000000000000000000000000000002419 167.0
SHD1_k127_3771074_8 - - - - 0.00000000000000000000000000000004617 130.0
SHD1_k127_3785728_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009918 256.0
SHD1_k127_3785728_1 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000000001269 203.0
SHD1_k127_3785728_2 InterPro IPR014922 - - - 0.00000000000000000000000000000000000000000000002189 174.0
SHD1_k127_3785728_3 DinB family - - - 0.00000000000000000000000000000000000001725 147.0
SHD1_k127_3785728_4 YCII-related domain - - - 0.0000000000000000000000000005815 116.0
SHD1_k127_379831_0 ATPase activity K16786,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 326.0
SHD1_k127_379831_1 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005902 287.0
SHD1_k127_379831_2 Cobalt transport protein K02008,K16785 - - 0.0000000000000000000000000000000000000000000000000001828 194.0
SHD1_k127_379831_3 phosphorelay sensor kinase activity K16923,K18967 - 2.7.7.65 0.00000000000000000000000000000000000000000000005125 179.0
SHD1_k127_379831_4 PFAM Inosine uridine-preferring nucleoside hydrolase K01239 - 3.2.2.1 0.000000000000000000000001148 108.0
SHD1_k127_3801847_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 478.0
SHD1_k127_3801847_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 329.0
SHD1_k127_3801847_2 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000000000000003887 196.0
SHD1_k127_3801847_3 Divergent PAP2 family K09775 - - 0.0000000000000000000000000000000000000000000000006521 179.0
SHD1_k127_3801847_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000003708 88.0
SHD1_k127_3801847_5 Cna B domain protein - - - 0.00000000000000006438 92.0
SHD1_k127_3801847_6 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00001818 50.0
SHD1_k127_3811579_0 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 310.0
SHD1_k127_381621_0 inositol 2-dehydrogenase activity K18431 - 2.7.7.82 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 416.0
SHD1_k127_3822887_0 PFAM Enoyl-CoA hydratase isomerase K07516 - 1.1.1.35 5.486e-249 791.0
SHD1_k127_3822887_1 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 455.0
SHD1_k127_3822887_2 Belongs to the thiolase family K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 420.0
SHD1_k127_3822887_3 PFAM acyl-CoA dehydrogenase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 392.0
SHD1_k127_3822887_4 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000001238 230.0
SHD1_k127_3822887_5 YsiA-like protein, C-terminal region - - - 0.0000000000000000003696 91.0
SHD1_k127_3832354_0 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 435.0
SHD1_k127_3832354_1 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 302.0
SHD1_k127_3832354_2 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005232 309.0
SHD1_k127_3832354_3 nucleotidyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004255 273.0
SHD1_k127_3832354_4 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003478 263.0
SHD1_k127_3832354_5 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000007883 160.0
SHD1_k127_3832354_6 -O-antigen K02847 - - 0.00000000000000005435 96.0
SHD1_k127_3832354_7 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.00006949 48.0
SHD1_k127_3843147_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 1.322e-272 844.0
SHD1_k127_3843147_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007222 611.0
SHD1_k127_3843147_10 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000002978 125.0
SHD1_k127_3843147_11 Protein of unknown function (DUF4013) - - - 0.000000000000000000001293 104.0
SHD1_k127_3843147_2 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 533.0
SHD1_k127_3843147_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 402.0
SHD1_k127_3843147_4 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 353.0
SHD1_k127_3843147_5 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000583 226.0
SHD1_k127_3843147_6 helix_turn_helix, Lux Regulon K02479 - - 0.00000000000000000000000000000000000000000845 161.0
SHD1_k127_3843147_7 Domain of unknown function (DUF4870) - - - 0.00000000000000000000000000000000000001201 147.0
SHD1_k127_3843147_8 Histidine kinase K07675 - 2.7.13.3 0.0000000000000000000000000000000000004864 153.0
SHD1_k127_3843147_9 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.000000000000000000000000000000001998 139.0
SHD1_k127_3863244_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000001493 205.0
SHD1_k127_3863244_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000001688 88.0
SHD1_k127_386526_0 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 341.0
SHD1_k127_386526_1 PFAM peptidase M1, membrane alanine aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 353.0
SHD1_k127_386526_2 PFAM peptidase M1, membrane alanine aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 329.0
SHD1_k127_386526_3 Putative esterase K07017 - - 0.0000000000000000000000000000000000000000000000000004363 196.0
SHD1_k127_386526_4 Pfam:DUF385 - - - 0.00000000001283 72.0
SHD1_k127_386526_5 PFAM Dynamin family protein - - - 0.00000008825 55.0
SHD1_k127_3871411_0 Ribose xylose arabinose galactoside ABC-type transport systems, permease components K10440 - - 0.00000000000000000000000000000000000000000000008178 182.0
SHD1_k127_3871411_1 TIGRFAM Diguanylate cyclase - - - 0.0000000000000000000000000000000000000002474 156.0
SHD1_k127_3871411_2 WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000001224 156.0
SHD1_k127_3889278_0 peptidase M42 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 392.0
SHD1_k127_3889278_1 peptidase M42 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 322.0
SHD1_k127_3889278_2 Peptidase family S51 - - - 0.00000000000000000000000000000000000000004115 160.0
SHD1_k127_3889278_3 peptidase M42 family protein - - - 0.000000000002142 68.0
SHD1_k127_389188_0 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 323.0
SHD1_k127_389188_1 PFAM regulatory protein, ArsR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001209 265.0
SHD1_k127_389188_2 Bacterial cellulose synthase subunit K20541 - - 0.000000000000000000000000000000002162 148.0
SHD1_k127_389188_3 Pfam:DUF59 - - - 0.000000000000000000000000000000006973 130.0
SHD1_k127_389188_4 FeS assembly ATPase SufC K09013 - - 0.00002161 46.0
SHD1_k127_3893488_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 479.0
SHD1_k127_3893488_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 298.0
SHD1_k127_3893488_2 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000000000000000000000000000000025 209.0
SHD1_k127_3900050_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 597.0
SHD1_k127_3900050_1 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 363.0
SHD1_k127_3906018_0 ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000369 321.0
SHD1_k127_3906018_1 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203 308.0
SHD1_k127_3906018_2 B3 4 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002083 267.0
SHD1_k127_3906018_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000001212 143.0
SHD1_k127_3906018_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000001314 144.0
SHD1_k127_3906018_5 Secreted repeat of unknown function - - - 0.00000000000000000000000000118 120.0
SHD1_k127_3906018_6 Secreted repeat of unknown function - - - 0.00000000000000000000000002164 115.0
SHD1_k127_3906018_7 Domain of unknown function (DU1801) - - - 0.000000001237 65.0
SHD1_k127_3914112_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02484,K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 386.0
SHD1_k127_3914112_1 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 312.0
SHD1_k127_3914112_2 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001626 261.0
SHD1_k127_3914112_3 Cytochrome c, class I - - - 0.0000000000000005669 83.0
SHD1_k127_3914112_5 Rubrerythrin - - - 0.0009234 48.0
SHD1_k127_3925727_0 Glutamine synthetase type III N terminal K01915 - 6.3.1.2 0.0 1177.0
SHD1_k127_3925727_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 288.0
SHD1_k127_3927356_0 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009751 271.0
SHD1_k127_3927356_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000004194 159.0
SHD1_k127_3927356_2 Uncharacterized membrane protein (DUF2298) - - - 0.00000000000000000000000000212 119.0
SHD1_k127_3932715_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 434.0
SHD1_k127_3932715_1 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000000000000000003249 232.0
SHD1_k127_3932715_2 Cupin domain - - - 0.00000000000000000000000000000000001209 136.0
SHD1_k127_3932715_3 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.0000000000000000006906 89.0
SHD1_k127_3940777_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00003,K00982,K00990,K06950,K15371 GO:0000820,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006521,GO:0008150,GO:0008882,GO:0010565,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0030312,GO:0031323,GO:0033238,GO:0040007,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0060359,GO:0062012,GO:0065007,GO:0070566,GO:0071944,GO:0080090,GO:1901698 1.1.1.3,1.4.1.2,2.7.7.42,2.7.7.59,2.7.7.89 1.757e-210 666.0
SHD1_k127_3940777_1 Phosphinothricin acetyltransferase K03823 - 2.3.1.183 0.000000000000000000000000000000000000000000000000002348 190.0
SHD1_k127_3940777_2 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 0.000000000000000001698 87.0
SHD1_k127_3945059_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 425.0
SHD1_k127_3945059_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 408.0
SHD1_k127_3945059_2 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002674 331.0
SHD1_k127_3959823_0 PFAM MerR family regulatory protein - - - 0.0000000000000000000000000000000000000000000000000256 189.0
SHD1_k127_3959823_1 Flavodoxin domain K00230 - 1.3.5.3 0.000000000000000000000000000000000000000004513 162.0
SHD1_k127_396038_0 NADPH quinone reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004241 380.0
SHD1_k127_396038_1 PFAM NB-ARC domain K16247 - - 0.00000000000000000000000000000000000000004445 174.0
SHD1_k127_3967820_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 432.0
SHD1_k127_3967820_1 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 372.0
SHD1_k127_3967820_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006397 252.0
SHD1_k127_3967820_3 iron dependent repressor K03709 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005506,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006355,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0009058,GO:0009237,GO:0009712,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0016151,GO:0018958,GO:0019184,GO:0019219,GO:0019222,GO:0019290,GO:0019540,GO:0019748,GO:0030145,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0034641,GO:0040007,GO:0043043,GO:0043167,GO:0043169,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0044550,GO:0045892,GO:0045934,GO:0046870,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0050897,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000002141 146.0
SHD1_k127_3967820_4 YHS domain - - - 0.000000000000000002679 87.0
SHD1_k127_3967820_5 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016020,GO:0016740,GO:0016741,GO:0032259,GO:0040007,GO:0044424,GO:0044464,GO:0071944 2.1.1.163,2.1.1.201 0.0000000000001379 79.0
SHD1_k127_3967820_6 PFAM FeoA family protein K04758 - - 0.000000005697 61.0
SHD1_k127_3970361_0 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 508.0
SHD1_k127_3970361_1 PFAM ABC-3 protein K09816,K09819 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007045 359.0
SHD1_k127_3970361_2 PFAM ABC transporter related K09820,K11710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006548 316.0
SHD1_k127_3970361_3 Pas domain K03320,K11525 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006438 297.0
SHD1_k127_3970361_4 Permease family K02824 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001941 261.0
SHD1_k127_3970361_5 Zinc-uptake complex component A periplasmic K02077,K09818 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007752 256.0
SHD1_k127_3970361_6 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000000000002714 196.0
SHD1_k127_3970361_7 Permease family K02824 - - 0.0000000000000001538 80.0
SHD1_k127_3970361_8 Histidine kinase K03320 - - 0.000000000003966 71.0
SHD1_k127_3974010_0 homoserine dehydrogenase K00003,K12524 - 1.1.1.3,2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 365.0
SHD1_k127_3974010_1 phosphatidylinositol kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001337 264.0
SHD1_k127_3974010_2 Protein of unknown function (DUF3090) - - - 0.000000000000000000000000000000000000000000000000000000000000000007645 229.0
SHD1_k127_3974010_3 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000001828 209.0
SHD1_k127_3984143_0 TIGRFAM O-acetylhomoserine O-acetylserine sulfhydrylase K01740 - 2.5.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 558.0
SHD1_k127_3984143_1 TIGRFAM parallel beta-helix repeat (two copies) - - - 0.00000000000000000000000000000000000000000000000005832 201.0
SHD1_k127_3984143_2 Sulfite reductase K00366,K00381,K00392 - 1.7.7.1,1.8.1.2,1.8.7.1 0.00000000000000000007224 93.0
SHD1_k127_3984143_4 N-acetylmuramoyl-L-alanine amidase - - - 0.0003065 54.0
SHD1_k127_3984278_0 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 567.0
SHD1_k127_3984278_1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002419 268.0
SHD1_k127_3984278_2 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002038 269.0
SHD1_k127_3984278_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000009877 226.0
SHD1_k127_3984278_4 transport system permease K01998 - - 0.00000000000000000000000000000000000000000000000008667 197.0
SHD1_k127_3984278_5 belongs to the aldehyde dehydrogenase family K21802 - 1.2.1.67 0.000000000000000000000000000001313 124.0
SHD1_k127_3984278_6 ABC transporter K01995 - - 0.00000000000000000000005909 100.0
SHD1_k127_398670_0 ATP-dependent transcriptional regulator K03556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 437.0
SHD1_k127_398670_1 - - - - 0.00000000000000009603 82.0
SHD1_k127_3995709_0 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 511.0
SHD1_k127_3995709_1 PFAM deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 312.0
SHD1_k127_3995709_2 Protein-disulfide isomerase - - - 0.000000000000000000000000000000000000000000000000001073 191.0
SHD1_k127_3995709_3 Phosphoglucomutase/phosphomannomutase, C-terminal domain - - - 0.00000000000000000000000000000003158 126.0
SHD1_k127_3995709_4 PFAM Stage V sporulation protein S K06416 - - 0.00000000000000000000000000000003434 130.0
SHD1_k127_3995709_5 PFAM Endonuclease Exonuclease phosphatase K07004 - - 0.000000000000000000009318 107.0
SHD1_k127_3995709_6 - - - - 0.0000000001539 74.0
SHD1_k127_401739_0 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 509.0
SHD1_k127_401739_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 404.0
SHD1_k127_401739_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000000000000000000000001422 222.0
SHD1_k127_401739_3 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000004562 221.0
SHD1_k127_401739_4 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000006874 153.0
SHD1_k127_401739_5 Beta-lactamase superfamily domain - - - 0.000000009479 62.0
SHD1_k127_4019832_0 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 327.0
SHD1_k127_4019832_1 PFAM binding-protein-dependent transport systems inner membrane component K02042 - - 0.00000000000000000000000000000000000000000000000000000000000000000005438 256.0
SHD1_k127_4019832_2 organic phosphonate transport K02044 - - 0.000000000000000000000000000000000000000000002125 174.0
SHD1_k127_403248_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 589.0
SHD1_k127_403248_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000004725 235.0
SHD1_k127_403248_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000002093 132.0
SHD1_k127_4041637_0 Natural resistance-associated macrophage protein K03322 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004021 604.0
SHD1_k127_4041637_1 PFAM aminotransferase class V K01634 - 4.1.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008273 564.0
SHD1_k127_4041637_2 iron dependent repressor K03709 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 307.0
SHD1_k127_4041637_3 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005056 268.0
SHD1_k127_4041637_4 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000000000000000007481 203.0
SHD1_k127_4041637_5 D-ala D-ala ligase C-terminus - - - 0.0000000000000000000000000000000000000000000000000000008012 204.0
SHD1_k127_4041637_6 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.000000000000000000000009013 108.0
SHD1_k127_4054641_0 PFAM NHL repeat containing protein - - - 3.431e-296 950.0
SHD1_k127_4054641_1 Lysin motif - - - 0.0008835 45.0
SHD1_k127_4056694_0 UDP-glucoronosyl and UDP-glucosyl transferase K16444 - 2.4.1.310 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 592.0
SHD1_k127_4056694_1 ATPase associated with various cellular K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 437.0
SHD1_k127_4056694_2 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 327.0
SHD1_k127_4056694_3 4-vinyl reductase, 4VR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 301.0
SHD1_k127_4056694_4 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 311.0
SHD1_k127_4056694_5 PFAM Roadblock LC7 family protein K07131 - - 0.0000000000000000000000000000000000000000000000000000001005 199.0
SHD1_k127_4074881_0 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 464.0
SHD1_k127_4074881_1 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 423.0
SHD1_k127_4074881_2 ABC transporter permease K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007974 411.0
SHD1_k127_4074881_3 drug transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009373 401.0
SHD1_k127_4074881_4 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000001689 97.0
SHD1_k127_4074881_5 branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00824 - 2.6.1.21 0.0000005258 52.0
SHD1_k127_4098342_0 N-terminal 7TM region of histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 413.0
SHD1_k127_4098342_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008383 385.0
SHD1_k127_4098342_2 - - - - 0.0000000000000000000000000000000000002029 149.0
SHD1_k127_4098342_3 acetyltransferase K06889,K19273 - - 0.00000000000000000000000000000000001786 141.0
SHD1_k127_4103015_0 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003116 274.0
SHD1_k127_4103015_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000003431 200.0
SHD1_k127_4103015_2 SMART Transport-associated and nodulation region K04065 - - 0.00002975 49.0
SHD1_k127_4103015_3 Amylo-alpha-1,6-glucosidase - - - 0.0002808 53.0
SHD1_k127_4116412_0 Lytic transglycosylase catalytic K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 506.0
SHD1_k127_4116412_1 ErfK ybiS ycfS ynhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 333.0
SHD1_k127_4116412_2 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 303.0
SHD1_k127_4116412_3 Predicted membrane protein (DUF2085) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 305.0
SHD1_k127_4116412_4 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007472 259.0
SHD1_k127_4116412_5 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001832 256.0
SHD1_k127_4116412_6 Belongs to the UPF0235 family K09131 - - 0.000000000000000000000000000000637 124.0
SHD1_k127_4116412_7 phospholipase Carboxylesterase K06999 - - 0.0000000000000000000000005485 113.0
SHD1_k127_4116412_8 integral membrane protein K02221 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000002991 95.0
SHD1_k127_4120895_1 There are 9 addittional ORFs identical to this one - - - 0.0000000000000000000000000000000000000000000000000000000004289 213.0
SHD1_k127_4120895_3 Domain of unknown function (DUF362) - - - 0.000000000926 63.0
SHD1_k127_4122362_0 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 354.0
SHD1_k127_4122362_1 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 340.0
SHD1_k127_4135466_1 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000371 283.0
SHD1_k127_4135466_2 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000000000000000000001578 200.0
SHD1_k127_4135466_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000000000000004385 195.0
SHD1_k127_4135466_4 Protein of unknown function (DUF1461) - - - 0.000000000002794 70.0
SHD1_k127_4135466_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.00003453 51.0
SHD1_k127_4135466_6 protein conserved in bacteria - - - 0.00006674 53.0
SHD1_k127_4142348_0 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009639 317.0
SHD1_k127_4142348_1 CAAX protease self-immunity - - - 0.00000000000000000000000000000000000000000002815 170.0
SHD1_k127_4142348_2 Uridine phosphorylase K00757 - 2.4.2.3 0.000000000000000000000000000000000000005091 155.0
SHD1_k127_4142348_3 Methyltransferase domain - - - 0.0000000000002922 72.0
SHD1_k127_4145900_0 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006328 375.0
SHD1_k127_4145900_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 326.0
SHD1_k127_4145900_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008076 259.0
SHD1_k127_4145900_3 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001054 259.0
SHD1_k127_4145900_4 PFAM Acyltransferase - - - 0.0000000000000000000000000000000000000007785 163.0
SHD1_k127_4145900_5 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000001083 105.0
SHD1_k127_4149469_0 Stage II sporulation E family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006342 521.0
SHD1_k127_4149469_1 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000004473 163.0
SHD1_k127_4149469_2 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749 - - 0.0000000000000000000000000000000004634 136.0
SHD1_k127_4149469_3 sigma factor antagonist activity K04757 - 2.7.11.1 0.00000000000000000000000000002048 122.0
SHD1_k127_4161780_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 612.0
SHD1_k127_4161780_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004746 565.0
SHD1_k127_4161780_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 435.0
SHD1_k127_4161780_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 285.0
SHD1_k127_4161780_4 TIGRFAM cell division protein FtsW K03588 - - 0.00000000000000000000000000000000000000000000000000000000000005613 229.0
SHD1_k127_4161780_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000001247 187.0
SHD1_k127_4161780_6 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000003628 186.0
SHD1_k127_4161780_7 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000347 179.0
SHD1_k127_4166555_0 PFAM cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 496.0
SHD1_k127_4166555_1 PFAM cytochrome bd ubiquinol oxidase subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 416.0
SHD1_k127_4166555_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000001508 248.0
SHD1_k127_4166555_3 pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000002041 218.0
SHD1_k127_4166555_4 PFAM Dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000001949 204.0
SHD1_k127_4166555_5 Transcriptional regulator - - - 0.000000000000000000004087 99.0
SHD1_k127_41667_0 PFAM alpha-2-macroglobulin domain protein K06894 - - 5.03e-297 966.0
SHD1_k127_4166964_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain - - - 6.301e-238 743.0
SHD1_k127_4166964_1 Haloacid dehalogenase domain protein hydrolase - - - 0.0000000000000000000000000000000000000000000000000001965 190.0
SHD1_k127_4166964_2 Domain of unknown function (DUF389) - - - 0.0000000000000000000000000000000000000000009394 172.0
SHD1_k127_4166964_3 3-beta hydroxysteroid dehydrogenase/isomerase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000003381 145.0
SHD1_k127_4170313_0 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 1.469e-287 890.0
SHD1_k127_4170313_1 PRC-barrel domain - - - 0.000000000000000000001488 102.0
SHD1_k127_4170313_2 TIGRFAM alpha-glucan - - - 0.00000000000004896 78.0
SHD1_k127_4170313_3 translation release factor activity - - - 0.000002453 53.0
SHD1_k127_4170313_4 IS1 transposase K07480 - - 0.000003517 51.0
SHD1_k127_4170897_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 351.0
SHD1_k127_4170897_1 PFAM glutamine amidotransferase class-I K07010 - - 0.0000000000000000000000000000000000000000000000000000000000000000004797 236.0
SHD1_k127_4170897_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458,K14660 - 2.3.1.179 0.0000000000000000000000000000000000000000000000009667 176.0
SHD1_k127_4170897_3 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000009137 144.0
SHD1_k127_4170897_4 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000001705 110.0
SHD1_k127_417351_0 Transketolase, pyrimidine binding domain K21417 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006716 389.0
SHD1_k127_417351_1 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006121 360.0
SHD1_k127_417351_2 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006359 320.0
SHD1_k127_4176552_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 531.0
SHD1_k127_4176552_1 HhH-GPD family K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005826 355.0
SHD1_k127_4176552_2 - - - - 0.0000000000000000000000000000000000000000000000001409 179.0
SHD1_k127_4176552_3 PFAM DnaJ homologue, subfamily C, member 28, conserved domain - - - 0.00000000000000000004843 93.0
SHD1_k127_4178998_0 histidine kinase A domain protein - - - 0.0 1110.0
SHD1_k127_4178998_1 PFAM cobalamin (vitamin B12) biosynthesis CbiM protein K02007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 360.0
SHD1_k127_4178998_2 FIST N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000831 277.0
SHD1_k127_4178998_3 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000002876 134.0
SHD1_k127_4182281_0 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 473.0
SHD1_k127_4182281_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009934 430.0
SHD1_k127_4182281_2 cytidylyl-transferase K00983 - 2.7.7.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000358 301.0
SHD1_k127_4182281_3 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000575 205.0
SHD1_k127_4182281_4 Sulfotransferase domain - - - 0.0000000000000000000000000002316 120.0
SHD1_k127_4182281_5 COG3119 Arylsulfatase A and related enzymes - - - 0.0001155 49.0
SHD1_k127_4196332_0 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009783 576.0
SHD1_k127_4196332_1 Iron-containing alcohol dehydrogenase K00001,K01714,K13954 - 1.1.1.1,4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 402.0
SHD1_k127_4196332_2 Antibiotic biosynthesis monooxygenase K11530 - 5.3.1.32 0.00000000000000000000000000000000000000001518 154.0
SHD1_k127_4196332_3 PFAM pyridoxamine 5'-phosphate oxidase-related - - - 0.000000000000000000000000000000000001919 142.0
SHD1_k127_4196332_4 - - - - 0.0000000000000000001323 93.0
SHD1_k127_4208765_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 357.0
SHD1_k127_4208765_1 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 349.0
SHD1_k127_4208765_2 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 328.0
SHD1_k127_4208765_3 F420H(2)-dependent quinone reductase - - - 0.00000000000008796 77.0
SHD1_k127_4231434_0 Domain of unknown function (DUF348) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006365 313.0
SHD1_k127_4231434_1 Cell envelope-related transcriptional attenuator domain - - - 0.00000000000000000000000000001063 132.0
SHD1_k127_4231434_2 rRNA (adenine-N6,N6-)-dimethyltransferase activity K15266 GO:0000154,GO:0000179,GO:0000959,GO:0001510,GO:0003674,GO:0003712,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006351,GO:0006364,GO:0006390,GO:0006396,GO:0006417,GO:0006725,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009058,GO:0009059,GO:0009295,GO:0009451,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022613,GO:0031167,GO:0031323,GO:0031326,GO:0031974,GO:0032259,GO:0032268,GO:0032774,GO:0034248,GO:0034470,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042254,GO:0042645,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0051252,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097659,GO:0140053,GO:0140098,GO:0140102,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.00025 45.0
SHD1_k127_4238483_0 ABC transporter transmembrane region K06147 - - 1.379e-247 779.0
SHD1_k127_4238483_1 ABC transporter transmembrane region K06147 - - 1.919e-239 754.0
SHD1_k127_4238483_2 acetyltransferase - - - 0.00000000000000000000000000000000001005 145.0
SHD1_k127_4238483_3 branched-chain-amino-acid transaminase activity K00824,K00826 GO:0003674,GO:0003824,GO:0004084,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006531,GO:0006532,GO:0006551,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009098,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.21,2.6.1.42 0.00000001186 65.0
SHD1_k127_4241021_0 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 355.0
SHD1_k127_4241021_1 Protein of unknown function (DUF554) K07150 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 292.0
SHD1_k127_4241021_2 PFAM Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000008417 215.0
SHD1_k127_4241021_3 EamA-like transporter family - - - 0.00000000000000000000000000000002912 137.0
SHD1_k127_4241021_4 COG1985 Pyrimidine reductase, riboflavin biosynthesis K14654 - 1.1.1.302 0.0000000000000000000003473 102.0
SHD1_k127_4241021_5 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000001444 102.0
SHD1_k127_4241021_6 serine threonine protein kinase - - - 0.0000006753 60.0
SHD1_k127_4241021_7 Von Willebrand factor A domain-containing protein 7-like - - - 0.00004516 53.0
SHD1_k127_4249146_0 Uncharacterized protein conserved in bacteria (DUF2252) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 521.0
SHD1_k127_4249146_1 sulphate transporter K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 452.0
SHD1_k127_4249146_2 response regulator, receiver K02479 - - 0.0000000000000000000000000000000172 129.0
SHD1_k127_4253314_0 Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 471.0
SHD1_k127_4253314_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000009987 188.0
SHD1_k127_4253314_2 PFAM S23 ribosomal protein - - - 0.00000000000001171 79.0
SHD1_k127_4253314_3 trans-aconitate 2-methyltransferase activity K00598,K02169 - 2.1.1.144,2.1.1.197 0.0000000000004662 70.0
SHD1_k127_4255151_0 Two component regulator propeller K00936 - 2.7.13.3 1.224e-226 729.0
SHD1_k127_4255151_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000015 282.0
SHD1_k127_4259329_0 glycosyl hydrolase 38 domain protein K01191 - 3.2.1.24 0.0 1281.0
SHD1_k127_4259329_1 Aminoacyl-tRNA editing domain K19055 - - 0.0000000000000000000000000000000000000127 150.0
SHD1_k127_4259329_2 peptidyl-tyrosine sulfation - - - 0.0007487 45.0
SHD1_k127_4269648_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 2.071e-210 659.0
SHD1_k127_4269648_1 Belongs to the 'phage' integrase family K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006508 364.0
SHD1_k127_4269648_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K00760,K04075,K15780 - 2.4.2.8,6.3.4.19 0.000000000000000000000000000000000000000000000000000002041 203.0
SHD1_k127_4269648_3 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000001522 79.0
SHD1_k127_4272416_0 Fibronectin type III-like domain K05349 - 3.2.1.21 4.273e-284 890.0
SHD1_k127_4272416_1 nitrogen compound transport K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 499.0
SHD1_k127_4272416_2 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 496.0
SHD1_k127_4272416_3 Belongs to the ABC transporter superfamily K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 425.0
SHD1_k127_4272416_4 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 405.0
SHD1_k127_4272416_5 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004016 254.0
SHD1_k127_4272416_6 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000001439 141.0
SHD1_k127_4279442_0 Redoxin - - - 0.0000000000000000000000000000000000000001626 152.0
SHD1_k127_4279442_1 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000003331 145.0
SHD1_k127_4279442_2 Sigma-70, region 4 K03088 - - 0.0000000000000000001416 92.0
SHD1_k127_4279442_3 PFAM Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000001408 87.0
SHD1_k127_4279442_4 Protein of unknown function, DUF488 - - - 0.00000000000009024 72.0
SHD1_k127_4279442_6 DNA-templated transcription, initiation - - - 0.00000001682 57.0
SHD1_k127_4289595_0 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 384.0
SHD1_k127_4289595_1 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 329.0
SHD1_k127_4289595_2 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 325.0
SHD1_k127_4289595_3 TIGRFAM RarD protein, DMT superfamily transporter K05786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000535 256.0
SHD1_k127_4290862_0 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005448 274.0
SHD1_k127_4290862_1 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000009 226.0
SHD1_k127_4290862_2 cheY-homologous receiver domain - - - 0.000000000000000000000000000001178 137.0
SHD1_k127_4309702_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 493.0
SHD1_k127_4309702_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 344.0
SHD1_k127_4309702_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009976 340.0
SHD1_k127_4309702_3 Involved in molybdopterin and thiamine biosynthesis, family 2 K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008656 348.0
SHD1_k127_4309702_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000006207 237.0
SHD1_k127_4309702_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000006151 196.0
SHD1_k127_4309702_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000003135 181.0
SHD1_k127_4309702_7 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000000002306 99.0
SHD1_k127_4309702_8 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000001029 61.0
SHD1_k127_4327193_0 PFAM peptidase M24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 419.0
SHD1_k127_4327193_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 412.0
SHD1_k127_4327193_2 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 394.0
SHD1_k127_4327193_3 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000155 246.0
SHD1_k127_4327193_4 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000005995 188.0
SHD1_k127_4327193_5 Secretion protein - - - 0.000001604 55.0
SHD1_k127_4334027_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 8.498e-296 948.0
SHD1_k127_4334027_1 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.00000000007303 63.0
SHD1_k127_4359209_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000004118 240.0
SHD1_k127_4359209_1 - - - - 0.000000000000000008862 98.0
SHD1_k127_4359209_2 PFAM CAAX amino terminal protease family - - - 0.0000000000000001218 87.0
SHD1_k127_4359209_3 Amidohydrolase family - - - 0.000003196 50.0
SHD1_k127_4368764_0 Aminotransferase class-III K15372 - 2.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005973 468.0
SHD1_k127_4368764_1 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 332.0
SHD1_k127_4368764_2 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000000000000003464 217.0
SHD1_k127_4368764_3 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000000003845 112.0
SHD1_k127_4368764_4 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000007075 114.0
SHD1_k127_4368764_5 hydrolase family 20, catalytic K12373 - 3.2.1.52 0.0000000000000001064 80.0
SHD1_k127_4368764_6 Required for chromosome condensation and partitioning K03529 - - 0.00000000007678 62.0
SHD1_k127_4376773_0 response regulator K07669 - - 0.0000000000000000000000000000000000000000000000000005938 191.0
SHD1_k127_4376773_1 ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000005106 135.0
SHD1_k127_4376773_2 PFAM response regulator receiver - - - 0.0000000000000000000000000002281 124.0
SHD1_k127_4376773_3 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000001044 78.0
SHD1_k127_4377847_0 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008157 307.0
SHD1_k127_4377847_1 Acetyltransferase (GNAT) domain K03824 - - 0.000000000000000000000000000000000007802 143.0
SHD1_k127_4379085_0 Methionine synthase B12-binding module cap domain protein K00548,K15023 - 2.1.1.13,2.1.1.258 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 461.0
SHD1_k127_4379085_1 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000004661 174.0
SHD1_k127_4379085_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000002165 166.0
SHD1_k127_4379085_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00001611 57.0
SHD1_k127_4381476_0 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 546.0
SHD1_k127_4381476_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 512.0
SHD1_k127_4381476_2 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005685 363.0
SHD1_k127_4381476_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000435 370.0
SHD1_k127_4381476_4 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001502 274.0
SHD1_k127_4381476_5 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000003255 233.0
SHD1_k127_4381476_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000001641 227.0
SHD1_k127_4381476_7 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000001612 149.0
SHD1_k127_4381476_8 Tetratricopeptide repeat - - - 0.00000000000000000001154 98.0
SHD1_k127_4381476_9 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.0004082 44.0
SHD1_k127_4390842_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 459.0
SHD1_k127_4390842_1 COG1063 Threonine dehydrogenase and related Zn-dependent K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 386.0
SHD1_k127_4390842_2 AAA domain K02282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 308.0
SHD1_k127_4390842_3 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000001239 241.0
SHD1_k127_4390842_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000007308 172.0
SHD1_k127_4390842_5 GGDEF domain - - - 0.00000000000000000000000000000000000000001078 166.0
SHD1_k127_4390842_6 - - - - 0.0000000000000000000000002181 109.0
SHD1_k127_4395638_0 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain K04940 - 1.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 568.0
SHD1_k127_4395638_1 Alpha amylase, catalytic domain K00690 - 2.4.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 368.0
SHD1_k127_4395638_2 cobalamin binding - - - 0.00000000000000000000000000000000000000000000000000000004871 200.0
SHD1_k127_4399501_0 Leucine carboxyl methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 411.0
SHD1_k127_4399501_1 formate C-acetyltransferase activity K00656 - 2.3.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000117 281.0
SHD1_k127_4399501_2 4Fe-4S single cluster domain K20037 - - 0.0000000000000000000000000000000000000000000000000000000000000009005 227.0
SHD1_k127_4399501_3 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000001227 104.0
SHD1_k127_4407750_0 PFAM WD domain, G-beta repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 590.0
SHD1_k127_4407750_1 Hep Hag repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000006437 233.0
SHD1_k127_4407750_2 Putative stress-induced transcription regulator - - - 0.0000000000000000000000000000000000000000005654 164.0
SHD1_k127_4407750_3 Cupin domain - - - 0.00000000000000000000001307 106.0
SHD1_k127_4414693_0 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005904 432.0
SHD1_k127_4414693_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000001434 245.0
SHD1_k127_4414693_2 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000001313 184.0
SHD1_k127_4414693_3 nitrogen compound transport K02033 - - 0.00000606 50.0
SHD1_k127_4427098_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 1.264e-220 699.0
SHD1_k127_4427098_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 582.0
SHD1_k127_4427098_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001941 286.0
SHD1_k127_443736_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 424.0
SHD1_k127_443736_1 helix_turn_helix, Lux Regulon - - - 0.0000000000001988 83.0
SHD1_k127_4445019_0 PFAM molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 376.0
SHD1_k127_4445019_1 PFAM peptidase M14, carboxypeptidase A - - - 0.000000000000000000000001141 116.0
SHD1_k127_4445019_2 Protein of unknown function (DUF2817) - - - 0.0000000000000002887 90.0
SHD1_k127_4453657_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 555.0
SHD1_k127_4453657_1 Ig-like domain from next to BRCA1 gene - - - 0.00000000000686 72.0
SHD1_k127_4464736_0 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 286.0
SHD1_k127_4464736_1 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004206 268.0
SHD1_k127_4464736_2 Branched-chain amino acid transport system / permease component K01998,K11961 - - 0.0000000000000000000000000000000000000000000000000000000000000000001052 242.0
SHD1_k127_4464736_3 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000002331 239.0
SHD1_k127_4464736_4 Cupin - - - 0.0000000000000000000000000000000000000000000002 170.0
SHD1_k127_4464736_5 Threonine dehydrogenase and related Zn-dependent K00008 - 1.1.1.14 0.000000000000000000000000000000000000000001921 161.0
SHD1_k127_4464736_6 Alanine dehydrogenase/PNT, C-terminal domain K00324 - 1.6.1.2 0.00000000000000000000000000005537 119.0
SHD1_k127_4464736_7 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000003609 117.0
SHD1_k127_4464736_8 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000002443 100.0
SHD1_k127_4466702_0 Aldo/keto reductase family K19265 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 479.0
SHD1_k127_4466702_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 328.0
SHD1_k127_4466702_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 319.0
SHD1_k127_4466702_3 TIGRFAM DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000002615 145.0
SHD1_k127_4466702_4 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K07443 - - 0.00000000000000000001013 100.0
SHD1_k127_4466702_5 Dienelactone hydrolase family - - - 0.0000000000001854 82.0
SHD1_k127_4466702_7 - - - - 0.0000000000004289 72.0
SHD1_k127_4466702_8 Sporulation and spore germination - - - 0.000000000005348 79.0
SHD1_k127_4466702_9 Peptidase family M23 - - - 0.00000000006508 76.0
SHD1_k127_4472803_0 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000001598 244.0
SHD1_k127_4472803_1 carboxylic acid catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000002342 213.0
SHD1_k127_4472803_2 Membrane - - - 0.00000000000000000000000000000000000000000000000000001863 192.0
SHD1_k127_4472803_3 Major facilitator Superfamily - - - 0.0000000000001755 78.0
SHD1_k127_4477910_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009081 473.0
SHD1_k127_4477910_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009726 468.0
SHD1_k127_4477910_2 SMART Nucleotide binding protein, PINc - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 447.0
SHD1_k127_4477910_3 Aldo Keto reductase - - - 0.00000000000000000000000000000000000000000000000000001872 189.0
SHD1_k127_4480911_0 Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007228 345.0
SHD1_k127_4480911_1 translation initiation inhibitor, yjgF family K04782 - 4.2.99.21 0.00000000000000000000000000000000000000000000000000118 185.0
SHD1_k127_4480911_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000003651 181.0
SHD1_k127_4480911_3 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors - - - 0.000000000003547 66.0
SHD1_k127_4489992_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003482 574.0
SHD1_k127_4489992_1 aspartic-type endopeptidase activity K02236,K02506,K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000001263 169.0
SHD1_k127_4489992_2 Cellulose 1,4-beta-cellobiosidase - - - 0.000000000000001042 90.0
SHD1_k127_4489992_3 PFAM TadE family protein - - - 0.0007881 51.0
SHD1_k127_449386_0 diguanylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004868 441.0
SHD1_k127_449386_1 Nudix hydrolase - - - 0.00000000000000000000000000000000000000000000002524 173.0
SHD1_k127_449386_2 regulation of single-species biofilm formation K02342,K03763,K13573 - 2.7.7.7 0.00000000000000000000000000000001358 136.0
SHD1_k127_449386_3 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000187 131.0
SHD1_k127_449386_4 Peptidase family S51 K13282 - 3.4.15.6 0.0000000000002419 78.0
SHD1_k127_4493890_0 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3) K00164 - 1.2.4.2 8.345e-261 822.0
SHD1_k127_4493890_1 Aconitase family (aconitate hydratase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 557.0
SHD1_k127_4493890_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005911 426.0
SHD1_k127_4511104_0 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 408.0
SHD1_k127_4511104_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 387.0
SHD1_k127_4511104_2 periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 312.0
SHD1_k127_4511104_3 Protein of unknown function (DUF2867) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005343 317.0
SHD1_k127_4511104_4 PFAM ATP corrinoid adenosyltransferase BtuR CobO CobP K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000037 253.0
SHD1_k127_4511104_5 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.000000000000000000000000000000000000000003243 164.0
SHD1_k127_4511104_6 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000001793 155.0
SHD1_k127_4511104_8 Protein of unknown function (DUF2867) - - - 0.00000005289 55.0
SHD1_k127_4526953_0 hydrolase activity, acting on ester bonds K15357,K19311 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0044237,GO:0044248 3.5.1.106 0.0000000000000000000000000000000000000000000000000000003462 203.0
SHD1_k127_4526953_1 - K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.00000000000000000000000000000004069 130.0
SHD1_k127_4526953_2 2'-5' RNA ligase superfamily - - - 0.0000000005209 61.0
SHD1_k127_453236_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 498.0
SHD1_k127_453236_2 PFAM Radical SAM domain protein K22227 - - 0.0000000000000000000000000000000000001154 146.0
SHD1_k127_453774_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008128 362.0
SHD1_k127_453774_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000489 225.0
SHD1_k127_453774_2 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000000000000000000000000000000000001247 213.0
SHD1_k127_454347_0 PFAM Cys Met metabolism pyridoxal-phosphate-dependent protein K01740 - 2.5.1.49 8.49e-236 736.0
SHD1_k127_454347_1 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00651 - 2.3.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 457.0
SHD1_k127_454347_2 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 430.0
SHD1_k127_454347_3 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 335.0
SHD1_k127_4564536_0 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 565.0
SHD1_k127_4564536_1 protein histidine kinase activity - - - 0.00000000000000000000000000000000000000000000000135 181.0
SHD1_k127_4564536_2 HD domain - - - 0.000000000000000000000000000000000000000000000056 194.0
SHD1_k127_4564536_3 Pas domain - - - 0.0003547 46.0
SHD1_k127_4572302_0 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 1.253e-219 688.0
SHD1_k127_4572302_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 438.0
SHD1_k127_4572302_2 Mannose-6-phosphate isomerase K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009001 419.0
SHD1_k127_4573162_0 PFAM aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 619.0
SHD1_k127_4573162_1 PFAM Penicillin binding protein transpeptidase domain K17838 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000009898 257.0
SHD1_k127_4573162_2 amino acid transport K02030 - - 0.0000000000000000000000000000000000000000000000000001128 198.0
SHD1_k127_4573162_3 SCP-2 sterol transfer family - - - 0.0000000000000000000000000003573 118.0
SHD1_k127_4602488_0 NADPH quinone reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 457.0
SHD1_k127_4602488_1 helix_turn_helix, Lux Regulon K03556 - - 0.000000000000000000000000000000000000000000000003623 178.0
SHD1_k127_4602488_2 Domain of unknown function (DUF4386) - - - 0.0000000000000000000000000000000000000000000007072 174.0
SHD1_k127_4602488_3 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.0000000000000001193 83.0
SHD1_k127_4630258_0 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 570.0
SHD1_k127_4630258_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000004176 266.0
SHD1_k127_4630258_2 Ferric reductase like transmembrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003345 259.0
SHD1_k127_4632508_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003812 455.0
SHD1_k127_4632508_1 oxidoreductase activity K02012,K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003377 431.0
SHD1_k127_4632508_2 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244 - 1.4.1.1,4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 373.0
SHD1_k127_4632508_3 Dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 336.0
SHD1_k127_4632508_4 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000299 259.0
SHD1_k127_4632508_5 PFAM Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000001475 222.0
SHD1_k127_4632508_6 DinB family - - - 0.00000000000000000000000000000000000000000001325 168.0
SHD1_k127_4632508_7 Sulfatase-modifying factor enzyme 1 K20333 - - 0.000000000000000000000000000000002442 138.0
SHD1_k127_4632508_8 Hypothetical methyltransferase - - - 0.0001665 45.0
SHD1_k127_4632508_9 PFAM DUF218 domain - - - 0.0002141 51.0
SHD1_k127_4635935_0 'Phosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000001617 233.0
SHD1_k127_4635935_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000008065 207.0
SHD1_k127_4635935_2 MerR, DNA binding - - - 0.000000000000000000000000002159 116.0
SHD1_k127_4635935_3 - - - - 0.000000000000000001596 91.0
SHD1_k127_4635935_4 phosphorelay signal transduction system - - - 0.00000000001316 72.0
SHD1_k127_4635935_5 PhoQ Sensor - - - 0.00000000005342 68.0
SHD1_k127_4642444_0 Transcriptional activator domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006716 532.0
SHD1_k127_4642444_1 metal-dependent phosphohydrolase, HD sub domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 392.0
SHD1_k127_4642444_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000007082 61.0
SHD1_k127_4642444_3 Cytochrome c-type biogenesis protein K02198 - - 0.00000004651 57.0
SHD1_k127_464295_0 TOBE domain K02062,K11072 - 3.6.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 346.0
SHD1_k127_464295_1 Binding-protein-dependent transport system inner membrane component K02063 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 321.0
SHD1_k127_464295_2 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000000000000000000004757 213.0
SHD1_k127_464295_3 Predicted membrane protein (DUF2085) - - - 0.00000000000000000000000000000000000000000000000000000001429 211.0
SHD1_k127_464295_4 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000007817 158.0
SHD1_k127_464295_5 Protein of unknown function (DUF402) K07586 - - 0.0000000000000000000000000000000003446 136.0
SHD1_k127_4643847_0 Phage late control gene D protein (GPD) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 327.0
SHD1_k127_4643847_1 T4-like virus tail tube protein gp19 - - - 0.00000000000000000000000000000000000000000000008529 172.0
SHD1_k127_4643847_2 - - - - 0.00000000000000000000000000000000001487 139.0
SHD1_k127_4643847_3 LysM domain - - - 0.00000000000000000000000000000000008526 143.0
SHD1_k127_4643847_4 Phage tail sheath protein K06907 - - 0.000000000000000000000000001035 112.0
SHD1_k127_4643847_5 T4-like virus tail tube protein gp19 - - - 0.00000000000000000004538 95.0
SHD1_k127_4645436_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003692 251.0
SHD1_k127_4645436_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000001189 254.0
SHD1_k127_4645436_2 - - - - 0.0000000000000000000000001132 110.0
SHD1_k127_4645436_3 AAA domain K07133 - - 0.0000000006215 63.0
SHD1_k127_4645436_4 - - - - 0.00005131 46.0
SHD1_k127_4666996_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008788 505.0
SHD1_k127_4666996_1 transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 480.0
SHD1_k127_4666996_10 - - - - 0.0000000000000001194 85.0
SHD1_k127_4666996_11 PFAM Glycoside hydrolase, family 13 - - - 0.0000002747 55.0
SHD1_k127_4666996_2 Malate synthase K01638 - 2.3.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005505 270.0
SHD1_k127_4666996_3 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000003008 174.0
SHD1_k127_4666996_4 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000006182 171.0
SHD1_k127_4666996_5 NlpC P60 family - - - 0.00000000000000000000000000000001259 139.0
SHD1_k127_4666996_6 Two component regulator propeller - - - 0.000000000000000000000000000003783 139.0
SHD1_k127_4666996_7 Histidine kinase K07678,K10909 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0140096,GO:1901564 2.7.13.3 0.00000000000000000000000001174 128.0
SHD1_k127_4666996_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000003979 110.0
SHD1_k127_4666996_9 Domain of unknown function (DUF4342) - - - 0.0000000000000000387 84.0
SHD1_k127_4686856_0 PFAM periplasmic binding protein LacI transcriptional regulator K02058,K10439 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 505.0
SHD1_k127_4686856_1 ABC transporter K02056,K10441 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 440.0
SHD1_k127_4686856_2 periplasmic binding protein LacI transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008042 336.0
SHD1_k127_4726471_0 EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004554 594.0
SHD1_k127_4726471_1 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007507 406.0
SHD1_k127_4726471_2 chemotaxis K03776 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005613 376.0
SHD1_k127_4726471_3 SpoIIAA-like - - - 0.0000000000000000000000000000000000000003194 150.0
SHD1_k127_4726471_4 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000000000000000001745 148.0
SHD1_k127_4726471_5 Ribosomal protein L33 K02913 - - 0.0000000000000000000005716 96.0
SHD1_k127_4726471_6 STAS domain K20978 - - 0.00000000000000000001828 94.0
SHD1_k127_4728750_0 PFAM Glycosidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 332.0
SHD1_k127_4728750_1 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000008415 156.0
SHD1_k127_4728750_2 Domain of unknown function (DUF1905) - - - 0.0000000000000000000000000000000000001137 145.0
SHD1_k127_4728750_3 NADH ubiquinone oxidoreductase, NADH-binding K00124,K00335,K18331 - 1.12.1.3,1.6.5.3 0.000000000000000006624 85.0
SHD1_k127_4730438_0 Transcriptional regulator K02529,K07506 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 381.0
SHD1_k127_4730438_1 TIGRFAM Diguanylate cyclase K21022 - 2.7.7.65 0.00000000000000000000000000000000139 150.0
SHD1_k127_4766580_0 Histidine kinase K07646 - 2.7.13.3 9.718e-291 918.0
SHD1_k127_4766580_1 Amino acid permease - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 2.167e-279 872.0
SHD1_k127_4766580_2 Amino acid permease - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 2.196e-196 625.0
SHD1_k127_4766580_3 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007033 304.0
SHD1_k127_4766580_4 TrkA-C domain K03499 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000225 263.0
SHD1_k127_4766580_5 TrkA-N domain K03499,K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001071 257.0
SHD1_k127_4766580_6 Amino acid permease - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 0.000000000000000000000000000000371 125.0
SHD1_k127_4766580_7 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000001599 87.0
SHD1_k127_4766580_8 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000005456 74.0
SHD1_k127_4766580_9 Amino acid permease - - - 0.000001761 58.0
SHD1_k127_476690_0 Heat shock 70 kDa protein K04043 - - 9.451e-303 934.0
SHD1_k127_476690_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 424.0
SHD1_k127_476690_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000002753 139.0
SHD1_k127_476690_3 Protein tyrosine kinase - - - 0.000000000000000000006831 96.0
SHD1_k127_4790947_0 Aminotransferase class-III K15372 - 2.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 542.0
SHD1_k127_4790947_1 Psort location Cytoplasmic, score 8.87 K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 484.0
SHD1_k127_4790947_2 Transcription regulator K03718 - - 0.000000000000000000000000000001944 125.0
SHD1_k127_4790947_3 Belongs to the aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.000002599 50.0
SHD1_k127_4793721_0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000000000000000007457 211.0
SHD1_k127_4793721_1 - - - - 0.00000000000000000000000003023 116.0
SHD1_k127_4793721_2 PFAM DinB family protein - - - 0.00000000000000000000001067 107.0
SHD1_k127_4793721_3 - - - - 0.000000000000006708 79.0
SHD1_k127_4793721_4 serine threonine protein kinase - - - 0.0000000000113 68.0
SHD1_k127_4793721_5 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box) 5'-GGA TG GA-3' K03556 - - 0.0000000000398 72.0
SHD1_k127_4800446_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008159 593.0
SHD1_k127_4800446_1 Domain of unknown function DUF11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 299.0
SHD1_k127_4800446_2 PFAM ROK family protein K00845 - 2.7.1.2 0.0000000000000000000002996 99.0
SHD1_k127_4832459_0 Peptidase family S41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 494.0
SHD1_k127_4832459_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002401 238.0
SHD1_k127_4832459_2 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000002689 232.0
SHD1_k127_4832581_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 6.146e-250 784.0
SHD1_k127_4832581_1 Amidohydrolase family - - - 7.22e-219 686.0
SHD1_k127_4832581_2 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K09065 - 2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075 531.0
SHD1_k127_4832581_3 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 443.0
SHD1_k127_4832581_4 UTRA K03710 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009707 250.0
SHD1_k127_4832581_5 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.000000000000000000000000000003089 124.0
SHD1_k127_4832581_6 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000001961 92.0
SHD1_k127_4832581_7 Involved in the tonB-independent uptake of proteins - - - 0.00005458 49.0
SHD1_k127_4834898_0 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07104 - 1.13.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009003 360.0
SHD1_k127_4834898_1 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 343.0
SHD1_k127_4834898_2 Glycoside hydrolase family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 331.0
SHD1_k127_4834898_3 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 299.0
SHD1_k127_4834898_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000008957 229.0
SHD1_k127_4834898_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000001429 137.0
SHD1_k127_4834898_6 methyltransferase K18846 - 2.1.1.180 0.000000000000000001455 94.0
SHD1_k127_4834898_7 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000085 65.0
SHD1_k127_4834898_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00006325 49.0
SHD1_k127_4852932_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 3.454e-261 816.0
SHD1_k127_4852932_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 299.0
SHD1_k127_4852932_2 PFAM phosphoesterase, RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 293.0
SHD1_k127_4852932_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000000000000000005865 160.0
SHD1_k127_4852932_4 Protein of unknown function (DUF448) K07742 - - 0.00000000000000000000000000000001312 130.0
SHD1_k127_486695_0 Peptidase M16C associated K06972 - - 0.0 1079.0
SHD1_k127_486695_1 ABC transporter K15738 - - 3.117e-223 707.0
SHD1_k127_486695_2 PFAM DNA methylase N-4 N-6 domain protein K00571 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006455 462.0
SHD1_k127_486695_3 FAD binding domain in molybdopterin dehydrogenase K03519,K12529 - 1.2.5.3 0.0000000000000000000000000000000000000000000008688 176.0
SHD1_k127_486695_4 Lysin motif - - - 0.0001457 55.0
SHD1_k127_4868354_0 trisaccharide binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 346.0
SHD1_k127_4868354_1 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000000000000000001284 198.0
SHD1_k127_4868354_2 - K06039,K07092 - - 0.000000000000000000000000000000000000000002368 158.0
SHD1_k127_4868354_3 Cell envelope-related transcriptional attenuator domain - - - 0.00000000000000000000000000004337 130.0
SHD1_k127_4868354_4 sulfur carrier activity K00549,K04085 - 2.1.1.14 0.000000000000005973 79.0
SHD1_k127_4889172_0 TIGRFAM FeS assembly protein SufB K07033,K09014 - - 4.317e-260 806.0
SHD1_k127_4889172_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 8.103e-196 619.0
SHD1_k127_4889172_10 PFAM Methyltransferase type 11 - - - 0.0000000000000000000002328 98.0
SHD1_k127_4889172_2 TIGRFAM FeS assembly protein SufD K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006061 567.0
SHD1_k127_4889172_3 PFAM ABC transporter related K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 445.0
SHD1_k127_4889172_4 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006732 341.0
SHD1_k127_4889172_5 N-acetylglucosaminylinositol deacetylase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008625 316.0
SHD1_k127_4889172_6 PFAM regulatory protein, ArsR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001684 267.0
SHD1_k127_4889172_7 SUF system FeS assembly protein, NifU family K04488 - - 0.000000000000000000000000000000000000000000000000000000001898 203.0
SHD1_k127_4889172_8 PFAM Rieske 2Fe-2S domain protein K00363,K05710 - 1.7.1.15 0.000000000000000000000000000000000002575 141.0
SHD1_k127_4894146_0 Malic enzyme, N-terminal domain K00027 - 1.1.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 439.0
SHD1_k127_4894146_1 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000002379 221.0
SHD1_k127_4894146_2 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000001085 135.0
SHD1_k127_4894146_3 PFAM Haloacid dehalogenase domain protein hydrolase K07025 - - 0.00000000000000000008356 98.0
SHD1_k127_4894146_4 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000025 48.0
SHD1_k127_4896105_0 PFAM peptidase S9 prolyl oligopeptidase active site domain protein K01354 - 3.4.21.83 5.856e-209 670.0
SHD1_k127_4896105_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008665 332.0
SHD1_k127_4896888_0 PFAM amine oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 590.0
SHD1_k127_4896888_1 PFAM conserved K07027 - - 0.00000000000000000000000000000000000000000000000000000000000003299 219.0
SHD1_k127_4896888_2 PFAM response regulator receiver K02282 - - 0.0000000000000000000000004689 114.0
SHD1_k127_4913684_0 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003531 530.0
SHD1_k127_4913684_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 386.0
SHD1_k127_4913684_2 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004555 382.0
SHD1_k127_4922869_0 SMART AAA ATPase K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 471.0
SHD1_k127_4922869_1 PFAM Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 392.0
SHD1_k127_4922869_2 Acetyltransferase (GNAT) domain K03817 - - 0.00000000000000000000000000000000000000000000000000000000000004573 222.0
SHD1_k127_4922869_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000002672 147.0
SHD1_k127_4946113_0 Oxidoreductase family, C-terminal alpha/beta domain K13016 - 1.1.1.335 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 429.0
SHD1_k127_4946113_1 Hexapeptide transferase K13018 - 2.3.1.201 0.0000000000000000000000000000000000000000000000000000000000000009285 220.0
SHD1_k127_4946113_2 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000001194 160.0
SHD1_k127_4946113_3 Starch synthase catalytic K16149 - 2.4.1.18 0.000000000000000000002958 107.0
SHD1_k127_4982947_0 alpha-galactosidase - - - 1.28e-216 694.0
SHD1_k127_4982947_1 Domain of unknown function (DUF5110) K01811 - 3.2.1.177 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 581.0
SHD1_k127_4982947_2 Binding-protein-dependent transport system inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001406 279.0
SHD1_k127_4982947_3 Binding-protein-dependent transport system inner membrane component K02025 - - 0.0000000000000000000000000000000000000000000000002987 181.0
SHD1_k127_4983543_0 isochorismatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 303.0
SHD1_k127_4983543_1 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000001283 196.0
SHD1_k127_4983543_2 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000000000004296 132.0
SHD1_k127_4996582_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 9.016e-219 686.0
SHD1_k127_4996582_1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 2.863e-216 683.0
SHD1_k127_4996582_2 PFAM Pyruvate K00180 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000005333 196.0
SHD1_k127_4996582_3 - - - - 0.00001872 47.0
SHD1_k127_5000214_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K01147,K12573 - 3.1.13.1 9.163e-214 675.0
SHD1_k127_5000214_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 422.0
SHD1_k127_5000214_2 Belongs to the peptidase M50B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 422.0
SHD1_k127_5000214_3 methylglyoxal synthase activity K01734 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0008150,GO:0008152,GO:0008929,GO:0009058,GO:0009438,GO:0009987,GO:0016829,GO:0016835,GO:0016838,GO:0019242,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0071704,GO:1901576 4.2.3.3 0.0000000000000000000000000000000000000000000000000000000000000001634 224.0
SHD1_k127_5000214_4 - - - - 0.000000000000000000000000000000000002239 141.0
SHD1_k127_5000214_5 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000000000000000008003 100.0
SHD1_k127_5000214_6 - - - - 0.00000000001934 68.0
SHD1_k127_5003227_0 decarboxylase K01593 - 4.1.1.105,4.1.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 356.0
SHD1_k127_5003227_1 DinB superfamily - - - 0.000000000000000000008062 96.0
SHD1_k127_5003227_2 DinB superfamily - - - 0.0000000000000106 75.0
SHD1_k127_5003998_0 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 343.0
SHD1_k127_5003998_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 321.0
SHD1_k127_5003998_10 nitrite transmembrane transporter activity K02532 - - 0.0000000000000000000000002851 108.0
SHD1_k127_5003998_11 HEPN domain - - - 0.0000000000000000000000008555 108.0
SHD1_k127_5003998_12 LysM domain K21449,K22278 - 3.5.1.104 0.00000000000000000000003883 109.0
SHD1_k127_5003998_13 PFAM Nucleotidyltransferase domain - - - 0.0007843 43.0
SHD1_k127_5003998_2 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000001171 262.0
SHD1_k127_5003998_3 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005226 264.0
SHD1_k127_5003998_4 ErfK ybiS ycfS ynhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000003709 226.0
SHD1_k127_5003998_5 ferrous iron binding K06990,K09141 - - 0.0000000000000000000000000000000000000000000000000000000001562 208.0
SHD1_k127_5003998_6 - - - - 0.000000000000000000000000000000000000000000000000000000002708 202.0
SHD1_k127_5003998_7 - - - - 0.0000000000000000000000000000000000000000000000000000004281 200.0
SHD1_k127_5003998_8 PFAM flavin reductase domain protein, FMN-binding - - - 0.000000000000000000000000000000000000000001461 161.0
SHD1_k127_5003998_9 transcriptional regulator, PadR family - - - 0.0000000000000000000000000000533 119.0
SHD1_k127_5004199_0 PFAM ABC transporter transmembrane region K11085 - - 1.625e-223 709.0
SHD1_k127_5004199_1 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein - - - 1.025e-218 693.0
SHD1_k127_5004199_2 ATP synthesis coupled electron transport K00342,K00343,K05568 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 503.0
SHD1_k127_5004199_3 Protein of unknown function (DUF998) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004746 235.0
SHD1_k127_5004199_4 NADH ubiquinone oxidoreductase, 20 Kd subunit K14088 - - 0.000000000000000000000000000000000000000000000000001638 184.0
SHD1_k127_5004199_5 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000003399 108.0
SHD1_k127_5004199_6 Multisubunit Na H antiporter MnhC subunit K00340,K05567 - 1.6.5.3 0.0000000000000000000001033 104.0
SHD1_k127_5004199_8 transcriptional regulator K03556 - - 0.00000008294 59.0
SHD1_k127_5016887_0 Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the stringent response , an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities K01524 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006082,GO:0006139,GO:0006725,GO:0006793,GO:0006797,GO:0006798,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008894,GO:0009056,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034641,GO:0042594,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:1901360,GO:1901575 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 346.0
SHD1_k127_5016887_1 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000004055 201.0
SHD1_k127_5016887_2 PFAM CHAD domain containing protein K08296 - - 0.000000000000000000000000000000000000000004141 166.0
SHD1_k127_5016887_3 SMART phosphoesterase PHP domain protein - - - 0.00000000000000000000000001723 111.0
SHD1_k127_5016887_4 Phosphohistidine phosphatase, SixA K08296 - - 0.0000004155 54.0
SHD1_k127_502150_0 Endoribonuclease that initiates mRNA decay K18682 - - 0.000000000000000000000000000000000000000000000000000000000004848 209.0
SHD1_k127_502150_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000003946 116.0
SHD1_k127_5030421_0 PFAM Exonuclease, RNase T and DNA polymerase III K02342,K03722 - 2.7.7.7,3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008142 567.0
SHD1_k127_5039942_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 1.168e-205 649.0
SHD1_k127_5039942_1 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 609.0
SHD1_k127_5039942_2 Aminotransferase class-V K01556 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016822,GO:0016823,GO:0019439,GO:0019441,GO:0019752,GO:0030429,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.7.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 475.0
SHD1_k127_5039942_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003583 443.0
SHD1_k127_5039942_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 376.0
SHD1_k127_5039942_5 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989 338.0
SHD1_k127_5039942_6 PFAM YbbR family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008146 332.0
SHD1_k127_5039942_7 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000005674 159.0
SHD1_k127_5039942_8 cellular response to heat K09807 - - 0.0000000000000000000000000000000004146 139.0
SHD1_k127_5043413_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.182e-290 902.0
SHD1_k127_5043413_1 xylulokinase activity K00848,K00851,K00854,K00862 - 2.7.1.12,2.7.1.17,2.7.1.215,2.7.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009232 377.0
SHD1_k127_5043413_2 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000001611 111.0
SHD1_k127_5050465_0 Pyruvate formate lyase K00656 - 2.3.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071 489.0
SHD1_k127_5050465_1 deoxyribose-phosphate aldolase K01619 - 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 325.0
SHD1_k127_5050465_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001256 269.0
SHD1_k127_5050465_3 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003263 255.0
SHD1_k127_5050465_4 transcriptional regulator - - - 0.0000000000000000000000000164 116.0
SHD1_k127_5050465_5 Protein of unknown function (DUF2877) - - - 0.00000000000000000000000007031 118.0
SHD1_k127_5055353_0 Belongs to the PAPS reductase family. CysH subfamily K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000002604 264.0
SHD1_k127_5055353_1 Porphobilinogen deaminase, dipyromethane cofactor binding domain K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000006502 262.0
SHD1_k127_5055353_2 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000000000000004193 201.0
SHD1_k127_5055353_3 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02303,K13542 - 2.1.1.107,4.2.1.75 0.000000000009959 67.0
SHD1_k127_5055406_0 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 308.0
SHD1_k127_5055406_1 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000003158 216.0
SHD1_k127_5055406_2 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000005759 221.0
SHD1_k127_5062040_0 - K07138 - - 4.67e-197 622.0
SHD1_k127_5062040_1 Deoxynucleoside kinase K15518 - 2.7.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 303.0
SHD1_k127_5062040_3 GIY-YIG catalytic domain K07461 - - 0.0000000000000000000000000000001481 125.0
SHD1_k127_5062040_4 NUDIX domain - - - 0.00000000000001479 78.0
SHD1_k127_5069982_0 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000007707 217.0
SHD1_k127_5069982_1 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000001805 211.0
SHD1_k127_5069982_2 Leucine carboxyl methyltransferase - - - 0.00000000000000000000000000000000000000000000000000002075 200.0
SHD1_k127_5069982_3 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000000000000000003736 154.0
SHD1_k127_5071179_0 belongs to the aldehyde dehydrogenase family K00132 - 1.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 419.0
SHD1_k127_5071179_1 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000007868 209.0
SHD1_k127_5071179_2 BMC K04026 - - 0.00000000000000000000000000000000000000000000106 169.0
SHD1_k127_5071179_3 Carboxysome structural protein involved in ethanolamine utilization K04026 GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0008270,GO:0031469,GO:0031471,GO:0042802,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464,GO:0046872,GO:0046914 - 0.000000000000000002196 86.0
SHD1_k127_5075847_0 Alpha-L-arabinofuranosidase B, catalytic K20844 - 3.2.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 420.0
SHD1_k127_5075847_1 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000576 228.0
SHD1_k127_5075847_2 - - - - 0.0000000000000000000000000002402 119.0
SHD1_k127_5075847_3 Prolyl-tRNA synthetase K03976 - - 0.00000000000000000000000000201 113.0
SHD1_k127_508030_0 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000009557 234.0
SHD1_k127_508030_1 transferase activity, transferring acyl groups - - - 0.00000000000000000000000000000000000000000000000000000000005756 213.0
SHD1_k127_508030_2 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K07025,K20866 - 3.1.3.10 0.0000000000000000000000000000000000000000002568 166.0
SHD1_k127_508030_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000005004 147.0
SHD1_k127_508030_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000005986 138.0
SHD1_k127_508030_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000025 124.0
SHD1_k127_508030_6 Transcriptional regulatory protein, C terminal K07667 - - 0.0000002551 59.0
SHD1_k127_5082352_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009059 440.0
SHD1_k127_5082352_1 Iron-sulfur cluster-binding protein K18929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 374.0
SHD1_k127_5082352_2 Cysteine-rich domain K18928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002097 265.0
SHD1_k127_5082352_3 methyltransferase K13311,K13326,K21335 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0016999,GO:0017000,GO:0017144,GO:0032259,GO:0042802,GO:0042803,GO:0044237,GO:0044249,GO:0046983 2.1.1.234 0.000000000000000000000000000000000000000000000000000000000000003439 224.0
SHD1_k127_5082352_4 - - - - 0.00000000000000000000000000000000000001649 158.0
SHD1_k127_5108123_0 Permease, YjgP YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 376.0
SHD1_k127_5108123_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000671 201.0
SHD1_k127_5108123_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000004904 177.0
SHD1_k127_5108123_3 PFAM RDD domain containing protein - - - 0.0000000000000000000000000000000009465 135.0
SHD1_k127_5108123_4 Protein of unknown function (DUF3619) - - - 0.00000000001561 69.0
SHD1_k127_5108123_5 Protein of unknown function (DUF3106) - - - 0.00000000002399 69.0
SHD1_k127_5119171_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 8.112e-253 798.0
SHD1_k127_5119171_1 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006037 380.0
SHD1_k127_5119171_2 Two component transcriptional regulator, winged helix family K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 310.0
SHD1_k127_5119171_3 TIGRFAM phosphohistidine phosphatase SixA K08296 - - 0.0005067 45.0
SHD1_k127_5126228_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006143 544.0
SHD1_k127_5126228_1 Putative pyruvate format-lyase activating enzyme (DUF1786) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000423 412.0
SHD1_k127_5126228_2 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 333.0
SHD1_k127_5126228_3 Glyoxalase-like domain K07032 - - 0.0000000000000000000000000000000000000000000000000003245 190.0
SHD1_k127_5126228_4 Transposase IS200 like K07491 - - 0.00000000000000000000000000000002759 132.0
SHD1_k127_5133591_0 transcriptional activator domain - - - 0.0000000000000000000000000000000000000000000000000004628 205.0
SHD1_k127_5133591_1 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000008656 85.0
SHD1_k127_5133591_2 Voltage gated chloride channel - - - 0.0000002055 54.0
SHD1_k127_5140500_0 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 4.463e-293 924.0
SHD1_k127_5140500_1 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000000000000000000009146 221.0
SHD1_k127_5140500_2 - K08223 - - 0.000000000000000000000000000000000000002237 164.0
SHD1_k127_5140500_3 TIGRFAM primosome, DnaD subunit - - - 0.0000000004356 64.0
SHD1_k127_5142044_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.7.6.5,3.1.7.2 1.211e-213 686.0
SHD1_k127_5142044_1 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000009593 261.0
SHD1_k127_5142044_2 Aminoacyl-tRNA editing domain K03976 - - 0.000000000000000000000000002071 114.0
SHD1_k127_5143848_0 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009052 474.0
SHD1_k127_5143848_1 teichoic acid transport K01990,K09689,K09691 - 3.6.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 456.0
SHD1_k127_5143848_2 ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 344.0
SHD1_k127_5143848_3 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000641 69.0
SHD1_k127_5145870_0 PFAM Aminotransferase class I and II K05825 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 473.0
SHD1_k127_5145870_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 416.0
SHD1_k127_5145870_2 Methyltransferase domain K06983 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 296.0
SHD1_k127_5145870_3 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000001148 207.0
SHD1_k127_5145870_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000002096 158.0
SHD1_k127_5145870_5 Predicted membrane protein (DUF2214) - - - 0.0000000000000000000000000000001607 129.0
SHD1_k127_5145870_6 pyridoxamine 5'-phosphate oxidase-related, FMN-binding - - - 0.000000000000000000000000000003651 124.0
SHD1_k127_5150060_0 PFAM Radical SAM domain protein K22227 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 375.0
SHD1_k127_5150060_1 EamA-like transporter family - - - 0.0000000000000000000009181 101.0
SHD1_k127_5150060_3 transferase activity, transferring glycosyl groups K00754 - - 0.0000002099 53.0
SHD1_k127_5158831_0 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003102 371.0
SHD1_k127_5158831_1 Cache domain - - - 0.000000000000000000000000000007892 131.0
SHD1_k127_5158831_2 Sporulation and spore germination - - - 0.000000000001108 69.0
SHD1_k127_5158831_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.0007209 48.0
SHD1_k127_5160464_0 Glycosyl hydrolase family 10 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001985 559.0
SHD1_k127_5160464_1 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006198 410.0
SHD1_k127_5160464_10 Involved in the tonB-independent uptake of proteins - - - 0.00001031 57.0
SHD1_k127_5160464_3 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006935 348.0
SHD1_k127_5160464_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006981 291.0
SHD1_k127_5160464_5 Transcriptional regulatory protein, C terminal K07668,K07775 - - 0.00000000000000000000000000000000000000000000000000000000000000000855 232.0
SHD1_k127_5160464_6 Thioredoxin-like - - - 0.00000000000000000000000000000000008057 134.0
SHD1_k127_5160464_7 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000009681 104.0
SHD1_k127_5160464_8 PFAM Redoxin domain protein - - - 0.000000000000711 72.0
SHD1_k127_5160464_9 antisigma factor binding K04749 - - 0.000006428 56.0
SHD1_k127_5162077_0 PFAM diacylglycerol kinase catalytic region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008778 314.0
SHD1_k127_5162077_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K16652 - 1.1.1.333 0.000000000000000000000000000000000000000000006775 169.0
SHD1_k127_5162077_2 diguanylate cyclase - - - 0.00000000000000000000000000000000000002239 159.0
SHD1_k127_5165303_0 SMART alpha amylase, catalytic sub domain K01176 - 3.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004068 554.0
SHD1_k127_5165303_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 331.0
SHD1_k127_5165303_10 COG0366 Glycosidases K01182 - 3.2.1.10 0.00000000000005925 72.0
SHD1_k127_5165303_12 FecR protein - - - 0.0004291 51.0
SHD1_k127_5165303_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 314.0
SHD1_k127_5165303_3 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000007343 215.0
SHD1_k127_5165303_4 Alpha-amylase domain K01182 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.10 0.000000000000000000000000000000000000000000000001152 176.0
SHD1_k127_5165303_5 Transcription factor zinc-finger - - - 0.000000000000000000000000000000000000000000000002334 179.0
SHD1_k127_5165303_6 Aminoacyl-tRNA editing domain K19055 - - 0.000000000000000000000000000000000117 139.0
SHD1_k127_5165303_7 - - - - 0.0000000000000000000000000000001096 127.0
SHD1_k127_5165303_8 CAAX protease self-immunity K07052,K09696 - - 0.00000000000000000000000004284 117.0
SHD1_k127_5165303_9 phosphatase activity K07025,K18816 - 2.3.1.82 0.0000000000000000000007461 102.0
SHD1_k127_5176108_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 1.83e-259 807.0
SHD1_k127_5176108_1 COG0520 Selenocysteine lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 549.0
SHD1_k127_5176108_2 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009978 283.0
SHD1_k127_5176108_3 transferase activity, transferring glycosyl groups K21011,K21012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009691 281.0
SHD1_k127_5176108_4 PFAM Calcium calmodulin dependent protein kinase II - - - 0.0000000000000000000000000000003657 128.0
SHD1_k127_5217385_0 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000003402 217.0
SHD1_k127_5217385_1 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000001284 177.0
SHD1_k127_5217385_2 Amidohydrolase family K01464,K01466 - 3.5.2.2,3.5.2.5 0.00000000000000000000000000000000001209 136.0
SHD1_k127_5219676_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 7.591e-272 875.0
SHD1_k127_5219676_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000001135 250.0
SHD1_k127_5219676_2 PFAM Roadblock LC7 family protein K07131 - - 0.00000000000000000000000000000000000000000000000001118 182.0
SHD1_k127_5219676_3 Alpha beta hydrolase - - - 0.000000000000000001888 91.0
SHD1_k127_5219676_4 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000005238 85.0
SHD1_k127_5219676_5 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0007807 45.0
SHD1_k127_5221509_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0 1092.0
SHD1_k127_5221509_1 Protein of unknown function (DUF1116) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003542 567.0
SHD1_k127_5221509_2 CoA-ligase K01902,K02381 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009361,GO:0032991,GO:0042709,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:1902494 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 476.0
SHD1_k127_5221509_3 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000007281 257.0
SHD1_k127_5221509_4 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000007567 220.0
SHD1_k127_5235619_0 Lysine-2,3-aminomutase K01843 - 5.4.3.2 3.314e-241 751.0
SHD1_k127_5235619_1 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000843 201.0
SHD1_k127_5235619_2 lipid binding - - - 0.0000000000000000000000000000000000000000000000009422 187.0
SHD1_k127_5235953_0 aldehyde ferredoxin oxidoreductase activity K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 566.0
SHD1_k127_5235953_1 Aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 557.0
SHD1_k127_5235953_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 501.0
SHD1_k127_5237736_0 HD domain K02660,K07315,K07814,K17763 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003097 284.0
SHD1_k127_5237736_1 Transcriptional activator domain - - - 0.000000000000000000000000000000000000000000000006409 190.0
SHD1_k127_5237736_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.0000000000000000000000000000000000000006013 154.0
SHD1_k127_5237736_3 Family of unknown function (DUF5317) - - - 0.00000000000000000000002957 106.0
SHD1_k127_5249139_0 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 613.0
SHD1_k127_5249139_1 Belongs to the aspartate glutamate racemases family K01779 - 5.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006098 336.0
SHD1_k127_5249139_10 Protein of unknown function with HXXEE motif - - - 0.00000000000000000000000001143 116.0
SHD1_k127_5249139_11 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.0008692 46.0
SHD1_k127_5249139_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 293.0
SHD1_k127_5249139_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001164 255.0
SHD1_k127_5249139_4 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003651 251.0
SHD1_k127_5249139_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000012 213.0
SHD1_k127_5249139_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000005932 176.0
SHD1_k127_5249139_7 Putative thioesterase (yiiD_Cterm) - - - 0.0000000000000000000000000000000000000000001392 165.0
SHD1_k127_5249139_8 MaoC domain protein dehydratase K00634,K17865 - 2.3.1.19,4.2.1.55 0.00000000000000000000000000000000000005073 146.0
SHD1_k127_5249139_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000004391 117.0
SHD1_k127_5251130_0 HI0933-like protein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 544.0
SHD1_k127_5251130_1 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 365.0
SHD1_k127_5251130_2 PFAM binding-protein-dependent transport systems inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000252 260.0
SHD1_k127_5251130_3 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000006013 230.0
SHD1_k127_5251130_4 transmembrane transport K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17242,K17316 - - 0.000000000000000000000000000000000000000000000008852 184.0
SHD1_k127_525349_0 Belongs to the UPF0173 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 345.0
SHD1_k127_525349_1 - - - - 0.0000000000000000000000000000001495 126.0
SHD1_k127_5254163_0 SAF K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 437.0
SHD1_k127_5254163_1 Domain of unknown function (DUF4260) - - - 0.0000000000000000000000000000000000002476 143.0
SHD1_k127_5254163_2 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000003653 84.0
SHD1_k127_5254163_3 PFAM NAD-dependent epimerase dehydratase K00067 - 1.1.1.133 0.00000001093 59.0
SHD1_k127_5261084_0 Transposase domain (DUF772) - - - 0.0000000000000000000000000000000278 136.0
SHD1_k127_5261084_1 Multicopper oxidase - - - 0.0000000000000000001207 94.0
SHD1_k127_5266926_0 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 4.385e-203 651.0
SHD1_k127_5266926_1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit K14090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008057 561.0
SHD1_k127_5266926_2 quinone binding K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006555 390.0
SHD1_k127_5266926_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001744 276.0
SHD1_k127_5266926_4 NADH ubiquinone oxidoreductase, 20 Kd subunit K14088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009098 256.0
SHD1_k127_5266926_5 Homocysteine S-methyltransferase K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000002081 232.0
SHD1_k127_5266926_6 Uroporphyrinogen decarboxylase (URO-D) K14080 - 2.1.1.246 0.00000000000000000000000000000000000000000000000000000000000562 220.0
SHD1_k127_5266926_8 4Fe-4S binding domain K14091 - - 0.0000000000000000000000000000000000113 149.0
SHD1_k127_5266926_9 hydrogenase maturation protease K08315 - 3.4.23.51 0.0000000000000000000001065 106.0
SHD1_k127_5269519_0 Alpha amylase, catalytic domain - - - 0.00000000000000000000000000000000000009528 150.0
SHD1_k127_5273944_0 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 362.0
SHD1_k127_5273944_1 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 352.0
SHD1_k127_5273944_2 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000832 164.0
SHD1_k127_5273944_3 PFAM secretion protein HlyD family protein K01993 - - 0.000000000000000000000000000000000009087 149.0
SHD1_k127_5273944_5 PspC domain K03973 - - 0.0000000000004363 73.0
SHD1_k127_5275948_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0 1207.0
SHD1_k127_5275948_1 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 286.0
SHD1_k127_5275948_2 CO dehydrogenase flavoprotein C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 290.0
SHD1_k127_5275948_3 Periplasmic binding protein-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002918 261.0
SHD1_k127_5275948_4 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000007573 149.0
SHD1_k127_5289048_0 Transporter associated domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000004062 241.0
SHD1_k127_5289048_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000004311 211.0
SHD1_k127_5289048_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.000000000000000000000000000000005531 139.0
SHD1_k127_5289048_3 - - - - 0.000002471 56.0
SHD1_k127_5289048_4 STAS domain K04749 - - 0.000006541 53.0
SHD1_k127_530144_0 Extracellular solute-binding protein K11069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 422.0
SHD1_k127_530144_1 ABC-type spermidine putrescine transport system, permease component II K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001611 283.0
SHD1_k127_530144_2 ABC-type spermidine putrescine transport system, permease component I K02054,K11071 - - 0.000000000000000000000000000000000000000000000000000003489 192.0
SHD1_k127_530144_3 sequence-specific DNA binding K03718,K03719 - - 0.000000000000000000000000000000000000000003212 159.0
SHD1_k127_5301682_0 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005662 314.0
SHD1_k127_5301682_2 KAP family P-loop domain - - - 0.000000000000000004126 97.0
SHD1_k127_5301682_3 PFAM Transglycosylase SLT domain K08309 - - 0.000000000000008397 83.0
SHD1_k127_5301682_4 stress-induced mitochondrial fusion K04066,K07037,K17266 - - 0.000000001077 66.0
SHD1_k127_5301682_5 stress-induced mitochondrial fusion K04066,K07037,K17266 - - 0.000000003214 70.0
SHD1_k127_5302684_0 Putative glucoamylase K13688 - - 0.0 2173.0
SHD1_k127_5302684_1 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 344.0
SHD1_k127_5302684_2 PFAM Ribonuclease BN-like family K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 333.0
SHD1_k127_5302684_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000006561 123.0
SHD1_k127_5302684_4 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000003294 93.0
SHD1_k127_5302684_5 PFAM ABC-2 type transporter K01992 - - 0.0000000000000004684 85.0
SHD1_k127_5302684_6 Universal stress protein - - - 0.00000000000006543 78.0
SHD1_k127_5302684_7 PRC-barrel domain - - - 0.0000000000005186 74.0
SHD1_k127_5302684_8 UPF0391 membrane protein - - - 0.000000000005528 68.0
SHD1_k127_5302684_9 AMP binding - - - 0.00000006968 57.0
SHD1_k127_5307740_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 449.0
SHD1_k127_5307740_1 Fumarate hydratase (Fumerase) K01676,K01677 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 313.0
SHD1_k127_5307740_2 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 311.0
SHD1_k127_5307740_3 Fumarase C-terminus K01676,K01678 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 299.0
SHD1_k127_5307740_4 TIGRFAM LAO AO transport system ATPase K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000266 266.0
SHD1_k127_5311076_0 ATP-dependent transcriptional regulator, MalT-like, LuxR family K03556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004218 490.0
SHD1_k127_5311076_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 356.0
SHD1_k127_5313532_0 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 5.775e-227 714.0
SHD1_k127_5313532_1 Branched-chain amino acid transport system / permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 541.0
SHD1_k127_5313532_2 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005495 533.0
SHD1_k127_5313532_3 ABC transporter substrate-binding protein PnrA-like K02058,K07335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001085 280.0
SHD1_k127_5316767_0 response regulator - - - 0.000000000000009321 76.0
SHD1_k127_5316767_2 - - - - 0.00001016 57.0
SHD1_k127_5316767_3 - - - - 0.0000707 51.0
SHD1_k127_532987_0 purine nucleotide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 377.0
SHD1_k127_532987_1 Aldo Keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004926 350.0
SHD1_k127_532987_2 PFAM Transglycosylase-associated protein - - - 0.000000000009747 68.0
SHD1_k127_5335817_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239 - 1.3.5.1,1.3.5.4 1.175e-283 883.0
SHD1_k127_5335817_1 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 338.0
SHD1_k127_5335817_2 Predicted membrane protein (DUF2306) - - - 0.0000000000000000000000000000000000000000000000001409 179.0
SHD1_k127_5335817_3 Rieske [2Fe-2S] domain K03886 - - 0.0000000000000000000000001804 113.0
SHD1_k127_5335817_4 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.000000001357 64.0
SHD1_k127_5335817_5 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.0000161 53.0
SHD1_k127_5337894_0 Protein-glutamate methylesterase K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 348.0
SHD1_k127_5337894_1 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000005141 186.0
SHD1_k127_5337894_2 transposase activity - - - 0.000000000000000000000000000000000000000001205 160.0
SHD1_k127_5337894_4 transposase activity - - - 0.00000000000000000000007097 102.0
SHD1_k127_5340936_0 ABC transporter transmembrane region - - - 1.048e-225 716.0
SHD1_k127_5340936_1 Transglutaminase-like superfamily - - - 0.000000000000005378 86.0
SHD1_k127_5340936_2 ABC transporter transmembrane region K06147 - - 0.0000000005226 60.0
SHD1_k127_5348210_0 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 372.0
SHD1_k127_5348210_1 ABC-type dipeptide oligopeptide nickel transport K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007398 297.0
SHD1_k127_5348210_2 ABC-type dipeptide transport system periplasmic component K02035 - - 0.000000000000000000000000000000000000000000405 166.0
SHD1_k127_5348210_3 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.00000000007652 72.0
SHD1_k127_5350659_0 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000178 271.0
SHD1_k127_5350659_1 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000003452 239.0
SHD1_k127_53606_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005134 458.0
SHD1_k127_53606_1 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 308.0
SHD1_k127_53606_2 FR47-like protein - - - 0.0000000000000000000000000000000000000000005283 162.0
SHD1_k127_53606_3 LysM domain K03046,K03641,K08642 - 2.7.7.6 0.00000000000000000000000000000001358 136.0
SHD1_k127_5364858_0 Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7' K00231,K00514,K02293,K09879,K21677 - 1.17.8.1,1.3.3.15,1.3.3.4,1.3.5.5,1.3.5.6 0.0000000000000000000000000000000000000000000000000000000000000000000205 241.0
SHD1_k127_5364858_1 Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7' K00231,K00514,K02293,K09879,K21677 - 1.17.8.1,1.3.3.15,1.3.3.4,1.3.5.5,1.3.5.6 0.00000000000000000000000000000000000000000000000002196 187.0
SHD1_k127_5364858_2 PFAM von Willebrand factor type A - - - 0.0000000000002986 79.0
SHD1_k127_5364858_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.000000000204 72.0
SHD1_k127_5367027_0 Heparinase II/III N-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 562.0
SHD1_k127_5367027_1 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001568 230.0
SHD1_k127_5367027_2 Glycosyl transferase family 4 K02851,K13007 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000002165 181.0
SHD1_k127_5381663_0 COG2706 3-carboxymuconate cyclase K07404 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008391 360.0
SHD1_k127_5381663_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000009912 203.0
SHD1_k127_5381663_2 Protein of unknown function (DUF2721) - - - 0.0000000000000000000000000000000000003033 145.0
SHD1_k127_5381663_4 - - - - 0.0000000000005787 73.0
SHD1_k127_5386516_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 424.0
SHD1_k127_5386516_1 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008986 394.0
SHD1_k127_5386516_2 - - - - 0.0000000000000008793 80.0
SHD1_k127_5398737_0 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 368.0
SHD1_k127_5398737_1 histidine kinase HAMP region domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007709 299.0
SHD1_k127_5398737_2 Heterodisulfide reductase subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000006398 252.0
SHD1_k127_5398737_3 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000337 233.0
SHD1_k127_5398737_4 4Fe-4S dicluster domain K03389,K03390,K16887,K18930 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000008439 138.0
SHD1_k127_5398737_5 cheY-homologous receiver domain - - - 0.000000000000002885 81.0
SHD1_k127_5403125_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001499 280.0
SHD1_k127_5403125_1 PFAM ABC transporter related K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000008805 176.0
SHD1_k127_5403125_2 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.0000000000000000000000000000000000000817 149.0
SHD1_k127_5403125_3 subunit of a heme lyase K02200 - - 0.0000000000000000000000000000000000761 139.0
SHD1_k127_5403125_4 zinc-ribbon domain - - - 0.0000000000000000000000000008026 119.0
SHD1_k127_5411889_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007138 488.0
SHD1_k127_5411889_1 ferrous iron binding K06990,K15755 - - 0.00000000000000000000000000000000000000000000000000000001179 207.0
SHD1_k127_5411889_2 - - - - 0.000000000000000000000000000000000000000000000000000006085 193.0
SHD1_k127_5411889_3 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000205 131.0
SHD1_k127_5411889_4 Transcriptional regulator - - - 0.0000000000000000000000000002593 117.0
SHD1_k127_5411889_5 alcohol dehydrogenase - - - 0.000000007555 67.0
SHD1_k127_5411889_6 lipolytic protein G-D-S-L family - - - 0.000828 50.0
SHD1_k127_5414342_0 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008041 322.0
SHD1_k127_5414342_1 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000001108 187.0
SHD1_k127_5414342_2 tetraacyldisaccharide 4'-kinase activity K09791 - - 0.000000000000000000000003274 105.0
SHD1_k127_5414342_4 PFAM VanW family protein - - - 0.00000000001941 66.0
SHD1_k127_5425750_0 Copper binding proteins, plastocyanin/azurin family K00368 - 1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 530.0
SHD1_k127_5425750_1 Cyclic nucleotide-monophosphate binding domain K21564 - - 0.00000000000000000000000000000000000000000003434 169.0
SHD1_k127_5425750_2 Domain of unknown function (DUF1858) - - - 0.000000003205 60.0
SHD1_k127_547213_0 ethanolamine catabolic process K04024 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 346.0
SHD1_k127_547213_1 Aldehyde dehydrogenase family K00132 - 1.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002087 278.0
SHD1_k127_547213_2 ethanolamine catabolic process K04027 - - 0.00000000000000000000000000000000000000003625 153.0
SHD1_k127_547213_3 ethanolamine catabolic process - - - 0.000000000000000000000000000000000000002349 147.0
SHD1_k127_547213_4 ethanolamine catabolic process K04019,K04030 - - 0.000000000000000000000000000003694 126.0
SHD1_k127_5473345_0 proline dipeptidase activity - - - 2.211e-227 711.0
SHD1_k127_5473345_1 PFAM Transketolase central region K21417 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 519.0
SHD1_k127_5473345_10 PFAM dehydrogenase E1 component K21416 - - 0.00000000000000000000000000000000000000000000001122 174.0
SHD1_k127_5473345_2 PFAM amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 451.0
SHD1_k127_5473345_3 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006168 428.0
SHD1_k127_5473345_4 import. Responsible for energy coupling to the transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 409.0
SHD1_k127_5473345_5 Periplasmic binding protein domain K10439 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 367.0
SHD1_k127_5473345_6 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 361.0
SHD1_k127_5473345_7 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001794 257.0
SHD1_k127_5473345_8 Belongs to the binding-protein-dependent transport system permease family K10440 - - 0.000000000000000000000000000000000000000000000000000000000000000001422 240.0
SHD1_k127_5473345_9 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000001769 228.0
SHD1_k127_5481574_0 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 465.0
SHD1_k127_5481574_1 Peptidase M1, membrane alanine aminopeptidase - - - 0.0000000000000001358 83.0
SHD1_k127_5505434_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 5.254e-250 802.0
SHD1_k127_5505434_1 Serine threonine protein kinase K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 469.0
SHD1_k127_5505434_2 SMART AAA ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001044 276.0
SHD1_k127_5505434_3 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001711 266.0
SHD1_k127_5505434_4 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000001046 258.0
SHD1_k127_5505434_5 AAA-like domain - - - 0.00000000000000000000000000000000000002947 147.0
SHD1_k127_5505434_6 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000001647 139.0
SHD1_k127_5505434_7 Tfp pilus assembly protein FimV - - - 0.000198 53.0
SHD1_k127_557871_0 ThiF family K21029,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 495.0
SHD1_k127_557871_1 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 403.0
SHD1_k127_557871_2 Domain of unknown function (DUF4395) - - - 0.0000000000000000000000000000000000000000000003704 171.0
SHD1_k127_557871_3 JAB/MPN domain - - - 0.00000000000000000000000000001943 124.0
SHD1_k127_557871_4 COG0526, thiol-disulfide isomerase and thioredoxins K03671 - - 0.0000000000000000000000000008322 121.0
SHD1_k127_557871_5 ThiS family K03636 - - 0.00000000000000000000002505 102.0
SHD1_k127_557871_6 Belongs to the cysteine synthase cystathionine beta- synthase family K12339,K21148 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0033847,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.113,2.5.1.47 0.0000000000000000000006961 96.0
SHD1_k127_583644_0 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 593.0
SHD1_k127_583644_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 510.0
SHD1_k127_583644_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000685 509.0
SHD1_k127_583644_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 300.0
SHD1_k127_583644_4 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000007121 185.0
SHD1_k127_583644_5 methyltransferase activity - - - 0.0000000000000000000000000000000000001482 147.0
SHD1_k127_583644_6 Protein of unknown function (DUF2905) - - - 0.00000000000001593 75.0
SHD1_k127_598037_0 dolichyl monophosphate biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002842 261.0
SHD1_k127_598037_1 PFAM LmbE family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001104 246.0
SHD1_k127_615405_0 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 382.0
SHD1_k127_615405_1 PFAM oxidoreductase, molybdopterin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 351.0
SHD1_k127_615405_2 DNA-templated transcription, initiation K03088 - - 0.0000000000000000001267 95.0
SHD1_k127_620753_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 481.0
SHD1_k127_620753_1 Stf0 sulphotransferase K21014 - 2.8.2.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000714 262.0
SHD1_k127_620753_2 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000001004 150.0
SHD1_k127_620753_3 SnoaL-like polyketide cyclase K15945 - - 0.000000000000000000000000000000000000007054 151.0
SHD1_k127_620753_4 helix_turn_helix, arabinose operon control protein - - - 0.000001232 50.0
SHD1_k127_626025_0 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758 325.0
SHD1_k127_626025_1 Integrase core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001505 283.0
SHD1_k127_626025_2 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000004542 249.0
SHD1_k127_626025_3 histone H2A K63-linked ubiquitination - - - 0.000000000000000000000000000000000000000000000000000000000000003101 229.0
SHD1_k127_626025_4 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000002542 145.0
SHD1_k127_626025_5 sh3 domain protein K01448 - 3.5.1.28 0.000000000000000000000000000000000001145 147.0
SHD1_k127_626025_6 PFAM Forkhead-associated protein - - - 0.00000000000000000000002281 110.0
SHD1_k127_626025_7 sh3 domain protein K01448 - 3.5.1.28 0.00000000000000000000007766 107.0
SHD1_k127_626025_8 Helix-turn-helix domain - - - 0.00000002049 61.0
SHD1_k127_626025_9 PFAM Forkhead-associated protein - - - 0.0000002326 55.0
SHD1_k127_630065_0 transcriptional regulator, Rrf2 family - - - 0.00000000000000000000000000000000000000000000000005239 181.0
SHD1_k127_630065_1 - - - - 0.000000000189 70.0
SHD1_k127_630065_2 SnoaL-like polyketide cyclase - - - 0.0000009142 56.0
SHD1_k127_650158_0 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 488.0
SHD1_k127_650158_1 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 394.0
SHD1_k127_650158_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 322.0
SHD1_k127_650158_3 Transcriptional regulatory protein, C terminal K07658 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 295.0
SHD1_k127_650158_4 ADP-glyceromanno-heptose 6-epimerase activity K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000007215 204.0
SHD1_k127_650158_5 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000001858 163.0
SHD1_k127_650158_6 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00007002 48.0
SHD1_k127_651568_0 mannose metabolic process K01191,K15524 GO:0003674,GO:0003824,GO:0004553,GO:0004559,GO:0005975,GO:0005996,GO:0006013,GO:0006464,GO:0006517,GO:0006807,GO:0008150,GO:0008152,GO:0009100,GO:0009987,GO:0015923,GO:0016787,GO:0016798,GO:0019318,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0071704,GO:1901135,GO:1901564 3.2.1.170,3.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 512.0
SHD1_k127_651568_1 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009841 485.0
SHD1_k127_653937_0 (ABC) transporter K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 411.0
SHD1_k127_653937_1 LysM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 323.0
SHD1_k127_653937_2 DNA-binding transcription factor activity K02470,K03833 - 5.99.1.3 0.000000000000000000000000000000000001573 152.0
SHD1_k127_653937_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000009101 121.0
SHD1_k127_65660_0 helix_turn_helix, Lux Regulon K03556 - - 3.996e-195 640.0
SHD1_k127_65660_1 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000008308 193.0
SHD1_k127_65660_2 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000006238 179.0
SHD1_k127_65660_3 Thioredoxin domain - - - 0.0000002499 53.0
SHD1_k127_65660_4 - - - - 0.0003267 46.0
SHD1_k127_6591_0 Squalene--hopene cyclase K17811 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009267,GO:0009605,GO:0009607,GO:0009975,GO:0009987,GO:0009991,GO:0010350,GO:0016101,GO:0016102,GO:0016114,GO:0016853,GO:0016872,GO:0019637,GO:0031667,GO:0031668,GO:0031669,GO:0033385,GO:0033554,GO:0035439,GO:0035440,GO:0042594,GO:0043167,GO:0043169,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044419,GO:0046872,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071496,GO:0071704,GO:0075136,GO:1901576 5.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 439.0
SHD1_k127_6591_1 transferase activity, transferring alkyl or aryl (other than methyl) groups K15911,K22313 GO:0003674,GO:0003824,GO:0006629,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009605,GO:0009607,GO:0009987,GO:0016101,GO:0016102,GO:0016114,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0035440,GO:0042578,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044419,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071704,GO:0075136,GO:1901576 3.1.7.12,3.1.7.8,3.1.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005316 277.0
SHD1_k127_6591_2 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000001481 206.0
SHD1_k127_6591_3 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase - - - 0.0000000000000000000000000000000002816 139.0
SHD1_k127_6591_4 Protein conserved in bacteria - - - 0.0000000000159 75.0
SHD1_k127_6591_5 response regulator K11443 - - 0.0000007169 56.0
SHD1_k127_671706_0 Domain of unknown function (DUF3520) K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 460.0
SHD1_k127_671706_1 COG0366 Glycosidases K01215 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.70 0.000000000000006837 76.0
SHD1_k127_675965_0 PFAM glycoside hydrolase, family 1 K05350 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 586.0
SHD1_k127_675965_1 Glycosyl hydrolase 36 superfamily, catalytic domain K00702,K13688,K21298 - 2.4.1.20,2.4.1.333 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009203 338.0
SHD1_k127_675965_2 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005296 262.0
SHD1_k127_675965_3 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008787 263.0
SHD1_k127_675965_4 PFAM methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000004215 247.0
SHD1_k127_675965_5 Serine aminopeptidase, S33 K03928 - 3.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000003788 245.0
SHD1_k127_675965_6 COGs COG0491 Zn-dependent hydrolase including glyoxylase - - - 0.0000000000000000000000000000000000000000000000000000009841 199.0
SHD1_k127_675965_7 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000000000000000000000000000000000000094 193.0
SHD1_k127_677480_0 serine-type peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 376.0
SHD1_k127_677480_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001499 259.0
SHD1_k127_677480_2 Linear amide C-N hydrolases, choloylglycine hydrolase family K01442 - 3.5.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000003891 262.0
SHD1_k127_677480_3 Adenosine/AMP deaminase K01488 GO:0003674,GO:0003824,GO:0004000,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006144,GO:0006152,GO:0006154,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009113,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009156,GO:0009161,GO:0009163,GO:0009164,GO:0009165,GO:0009167,GO:0009168,GO:0009987,GO:0015949,GO:0015950,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0032261,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042440,GO:0042451,GO:0042454,GO:0042455,GO:0042737,GO:0043094,GO:0043096,GO:0043101,GO:0043103,GO:0043173,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046100,GO:0046101,GO:0046102,GO:0046103,GO:0046112,GO:0046128,GO:0046129,GO:0046130,GO:0046148,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 3.5.4.4 0.0000000000000000000000000000000000000000000000000000000001984 215.0
SHD1_k127_677480_4 DSBA-like thioredoxin domain - - - 0.000000000000000000000001782 106.0
SHD1_k127_677480_5 lipolytic protein G-D-S-L family K01179,K01183 - 3.2.1.14,3.2.1.4 0.0000000000000000001263 90.0
SHD1_k127_677480_6 Diguanylate cyclase - - - 0.0000000000153 77.0
SHD1_k127_677480_7 Protein of unknown function (DUF3592) - - - 0.000000002405 64.0
SHD1_k127_679151_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 3.853e-239 743.0
SHD1_k127_679151_1 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008394 358.0
SHD1_k127_679151_2 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000002778 126.0
SHD1_k127_679151_3 Chitinase class I K03791 - - 0.0000000000000006226 83.0
SHD1_k127_69432_0 HD domain K18967 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004799 528.0
SHD1_k127_69432_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 416.0
SHD1_k127_702758_0 Sensor histidine kinase, PAS, PAS, PAS and PAS domain-containing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 387.0
SHD1_k127_702758_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002362 258.0
SHD1_k127_702758_2 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000003458 236.0
SHD1_k127_702758_3 response regulator, receiver K02485 - - 0.00000000000000000000000000000000000000000000001165 175.0
SHD1_k127_702758_4 - - - - 0.000000008188 64.0
SHD1_k127_705815_0 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 327.0
SHD1_k127_705815_1 Transposase - - - 0.000000000000000000000000000000000000000000000000000000009665 207.0
SHD1_k127_705815_2 Transposase - - - 0.0000000000000009243 79.0
SHD1_k127_709878_0 Phosphoribulokinase / Uridine kinase family K00876 - 2.7.1.48 6.822e-224 706.0
SHD1_k127_709878_1 Dimerisation domain of Zinc Transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005481 359.0
SHD1_k127_709878_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 332.0
SHD1_k127_709878_3 Clostripain family - - - 0.00000000000000000000000000000000000000000000000006179 192.0
SHD1_k127_709878_4 VIT family - - - 0.000000000000000000000000000003964 129.0
SHD1_k127_711323_0 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 349.0
SHD1_k127_711323_1 Winged helix DNA-binding domain K09927 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000748 325.0
SHD1_k127_711323_2 Cupin domain - - - 0.00000000000000000000000000000000000002809 145.0
SHD1_k127_711323_3 PP-loop family K21947 - 2.8.1.15 0.00000000000000001369 85.0
SHD1_k127_720324_0 ATP-dependent transcriptional regulator, MalT-like, LuxR family K03556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 382.0
SHD1_k127_720324_1 CYTH domain - - - 0.00000000000000000000000000000000000000000000000000006899 192.0
SHD1_k127_720324_2 sequence-specific DNA binding - - - 0.00000000000000000000000000000000000000000001697 173.0
SHD1_k127_720324_3 - - - - 0.0000000000000000000004423 99.0
SHD1_k127_723832_0 Autoinducer binding domain K07782 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001023 281.0
SHD1_k127_723832_1 C-terminal, D2-small domain, of ClpB protein K11907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002849 276.0
SHD1_k127_728069_0 ATPases associated with a variety of cellular activities K02028 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 352.0
SHD1_k127_728069_1 Binding-protein-dependent transport system inner membrane component K02029 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007961 246.0
SHD1_k127_728069_2 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000005603 151.0
SHD1_k127_728069_3 Bacterial periplasmic substrate-binding proteins K02030 - - 0.000000000000000000000000000000000003497 150.0
SHD1_k127_728069_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000001845 128.0
SHD1_k127_733756_0 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000003346 241.0
SHD1_k127_733756_1 COG0438 Glycosyltransferase - - - 0.000000000000000000000000000000000000000000000000000007984 203.0
SHD1_k127_733756_2 Glycosyl transferases group 1 - - - 0.000000000000000001483 88.0
SHD1_k127_733756_3 PFAM glycosyl transferase family 2 - - - 0.0000000006291 61.0
SHD1_k127_743073_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 317.0
SHD1_k127_743073_1 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000003487 142.0
SHD1_k127_743073_2 Nacht domain K06147 - - 0.00000000000000000000000000000000000165 148.0
SHD1_k127_743073_3 Protein of unknown function (DUF2568) - - - 0.00000000000000000000000308 106.0
SHD1_k127_743073_4 PFAM Ethanolamine utilization protein EutN carboxysome structural protein Ccml - - - 0.00000000002359 68.0
SHD1_k127_743073_5 Ethanolamine utilisation protein EutN/carboxysome - - - 0.0000000001112 64.0
SHD1_k127_752676_0 ABC-type sugar transport system periplasmic component K02058,K10439 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 417.0
SHD1_k127_752676_1 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008042 336.0
SHD1_k127_752676_2 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 323.0
SHD1_k127_752676_3 COG1305 Transglutaminase-like enzymes - - - 0.0000006807 54.0
SHD1_k127_805994_0 protein modification by small protein conjugation - - - 0.00000000000000000000000000000000001028 147.0
SHD1_k127_805994_1 histone H2A K63-linked ubiquitination K01768 - 4.6.1.1 0.00000000000000000000000002757 118.0
SHD1_k127_805994_2 proteolysis K03665 - - 0.0000000000000000000003465 104.0
SHD1_k127_805994_3 WXG100 protein secretion system (Wss), protein YukD - - - 0.0000000000002435 72.0
SHD1_k127_807947_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 4.106e-235 740.0
SHD1_k127_807947_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 599.0
SHD1_k127_807947_2 ATP hydrolysis coupled proton transport K02123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 340.0
SHD1_k127_807947_3 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000006627 206.0
SHD1_k127_807947_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.00000000000000000000000000000000000001148 153.0
SHD1_k127_807947_5 subunit (C K02119 - - 0.0000000000000000000000000000000002728 141.0
SHD1_k127_807947_6 ATP synthase subunit C K02124 - - 0.000000000000000000006158 98.0
SHD1_k127_807947_7 -ATPase subunit F K02122 - - 0.000000000000004813 81.0
SHD1_k127_807947_8 Vacuolar ATP synthase subunit E K02150 GO:0000221,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006811,GO:0006812,GO:0006873,GO:0006885,GO:0007035,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016471,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019725,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030003,GO:0030004,GO:0030641,GO:0031090,GO:0031224,GO:0032991,GO:0033176,GO:0033178,GO:0033180,GO:0034220,GO:0036442,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044769,GO:0045851,GO:0046961,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0090662,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098805,GO:0098852,GO:0099131,GO:0099132,GO:1902600 - 0.000543 50.0
SHD1_k127_809313_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 340.0
SHD1_k127_809313_1 Putative oxalocrotonate tautomerase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001651 261.0
SHD1_k127_809313_2 Dehydrogenase - - - 0.00000000000000000000000000000000000007309 145.0
SHD1_k127_809313_3 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000215 115.0
SHD1_k127_809313_4 Glutathione S-transferase N-terminal domain - - - 0.0000000000000000003568 92.0
SHD1_k127_821907_0 Sodium/calcium exchanger protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 288.0
SHD1_k127_821907_1 Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine K05359 - 4.2.1.51,4.2.1.91 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 286.0
SHD1_k127_821907_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000001903 237.0
SHD1_k127_821907_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000009475 244.0
SHD1_k127_821907_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000001451 172.0
SHD1_k127_82914_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 562.0
SHD1_k127_82914_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 348.0
SHD1_k127_82914_2 Histidine Phosphotransfer domain - - - 0.000000000000000000000000001162 119.0
SHD1_k127_829772_0 PFAM Translin K07477 - - 0.000000000000000000000000000000000000000000000000000000000008775 213.0
SHD1_k127_829772_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000007595 183.0
SHD1_k127_829772_2 Ig-like domain from next to BRCA1 gene - - - 0.000000000000000000000000000000000000000005939 164.0
SHD1_k127_829772_3 nucleoside 2-deoxyribosyltransferase - GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009123,GO:0009125,GO:0009159,GO:0009162,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0070694,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 0.00000000000000000000000000002878 123.0
SHD1_k127_829772_4 Histidine kinase K01768,K12132 - 2.7.11.1,4.6.1.1 0.000000000000001277 81.0
SHD1_k127_834636_0 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 533.0
SHD1_k127_834636_1 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001276 268.0
SHD1_k127_834636_2 Putative regulatory protein - - - 0.000000004202 59.0
SHD1_k127_839166_0 Flavodoxin-like fold K00355 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004926 277.0
SHD1_k127_839166_1 helix_turn_helix, Lux Regulon K03556 - - 0.000000000000000000000000000000000000000000000007153 184.0
SHD1_k127_839166_2 - - - - 0.000000000003363 71.0
SHD1_k127_83962_0 PFAM Methicillin resistance protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 398.0
SHD1_k127_83962_1 PFAM Methicillin resistance protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005559 385.0
SHD1_k127_83962_2 3-beta hydroxysteroid dehydrogenase/isomerase family K01784 - 5.1.3.2 0.00000000000000000000003533 102.0
SHD1_k127_83962_3 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000002463 92.0
SHD1_k127_849402_0 Belongs to the RtcB family K14415 - 6.5.1.3 1.536e-236 739.0
SHD1_k127_849402_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 348.0
SHD1_k127_849402_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000001669 264.0
SHD1_k127_849402_3 Archease protein family (MTH1598/TM1083) - - - 0.000000000000000000000000000000000375 136.0
SHD1_k127_849402_4 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000003132 78.0
SHD1_k127_849402_5 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000007389 48.0
SHD1_k127_852880_0 PFAM metal-dependent phosphohydrolase, HD sub domain K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 410.0
SHD1_k127_852880_1 Integral membrane protein (intg_mem_TP0381) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006186 245.0
SHD1_k127_852880_2 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase - - - 0.000000000000000000000000000000000454 143.0
SHD1_k127_852880_3 PFAM Stage V sporulation protein S K06416 - - 0.0000000000000000000000000001041 119.0
SHD1_k127_857130_0 - - - - 0.0000000000000000000000000000000000009318 145.0
SHD1_k127_857130_1 GDP-mannose mannosyl hydrolase activity K00974,K03574,K18445 - 2.7.7.72,3.6.1.55,3.6.1.61 0.0000000000000000000002499 102.0
SHD1_k127_857130_2 Metallo-beta-lactamase superfamily - - - 0.0000000000004052 74.0
SHD1_k127_857130_3 HEAT repeat - - - 0.0000007656 60.0
SHD1_k127_868479_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 482.0
SHD1_k127_868479_1 Lipocalin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 354.0
SHD1_k127_868479_2 PFAM ABC transporter related K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008852 272.0
SHD1_k127_877512_0 subunit (C K02119 - - 0.00000000000000000002078 99.0
SHD1_k127_877512_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000002233 89.0
SHD1_k127_877512_2 PFAM secretion protein HlyD family protein K02005 - - 0.00003664 51.0
SHD1_k127_877512_3 H subunit K02107 - - 0.0000478 49.0
SHD1_k127_88819_0 Orotidine-5-phosphate decarboxylase orotate phosphoribosyltransferase K01591,K13421 - 2.4.2.10,4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000271 223.0
SHD1_k127_88819_2 - - - - 0.000000008143 64.0
SHD1_k127_893829_0 Catalyzes the transfer of the amino group of L-glutamate to LysW -aminoadipate 6-semialdehyde, generating LysW -gamma-L- lysine K05830 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 460.0
SHD1_k127_893829_1 Catalyzes the release of L-lysine from LysW -gamma-L- lysine K05831 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000936 372.0
SHD1_k127_893829_2 PFAM Stage V sporulation protein S K06416 - - 0.000000000000000000000000000005554 122.0
SHD1_k127_893829_3 helix_turn_helix, Lux Regulon - - - 0.000000000000000007685 93.0
SHD1_k127_893829_4 GIY-YIG catalytic domain K07461 - - 0.000000000000007071 76.0
SHD1_k127_893829_5 response regulator K07689 - - 0.000000002655 60.0
SHD1_k127_89794_0 Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA YnfE K07306 - 1.8.5.3 8.211e-238 757.0
SHD1_k127_89794_1 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 309.0
SHD1_k127_898110_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 6.982e-221 693.0
SHD1_k127_898110_1 Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase K11540 GO:0000050,GO:0000052,GO:0000166,GO:0001882,GO:0001884,GO:0002119,GO:0002134,GO:0002164,GO:0003674,GO:0003824,GO:0004070,GO:0004087,GO:0004088,GO:0004151,GO:0004672,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006213,GO:0006220,GO:0006221,GO:0006228,GO:0006464,GO:0006468,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009887,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0016053,GO:0016301,GO:0016310,GO:0016363,GO:0016597,GO:0016740,GO:0016741,GO:0016743,GO:0016772,GO:0016773,GO:0016787,GO:0016810,GO:0016812,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0017144,GO:0018107,GO:0018130,GO:0018193,GO:0018210,GO:0019103,GO:0019240,GO:0019438,GO:0019538,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0019899,GO:0022612,GO:0030424,GO:0030554,GO:0031406,GO:0031667,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032549,GO:0032551,GO:0032553,GO:0032555,GO:0032557,GO:0032559,GO:0032868,GO:0032991,GO:0033267,GO:0034399,GO:0034404,GO:0034641,GO:0034654,GO:0035295,GO:0035639,GO:0036094,GO:0036211,GO:0036477,GO:0042221,GO:0042455,GO:0042594,GO:0042802,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043434,GO:0043436,GO:0043603,GO:0043604,GO:0043679,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0046051,GO:0046112,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046394,GO:0046483,GO:0046777,GO:0046872,GO:0046914,GO:0048513,GO:0048565,GO:0048731,GO:0048732,GO:0048856,GO:0050896,GO:0055086,GO:0055123,GO:0060465,GO:0070013,GO:0070335,GO:0070406,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:0097458,GO:0098793,GO:0120025,GO:0120038,GO:0140096,GO:0150034,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901652,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1905905 2.1.3.2,3.5.2.3,6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 448.0
SHD1_k127_898110_2 Cytochrome b/b6/petB K00412,K03888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002719 246.0
SHD1_k127_898110_3 CutA1 divalent ion tolerance protein - - - 0.000000000000000000000002801 104.0
SHD1_k127_898110_4 Cytochrome b(C-terminal)/b6/petD K00412 - - 0.0000000000000001466 93.0
SHD1_k127_898110_5 Rieske [2Fe-2S] domain K02636 - 1.10.9.1 0.00000000001001 66.0
SHD1_k127_898110_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00005651 55.0
SHD1_k127_898110_7 Planctomycete cytochrome C - - - 0.0001304 54.0
SHD1_k127_898110_8 Copper binding proteins, plastocyanin/azurin family - - - 0.000579 49.0
SHD1_k127_953449_0 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.0000000000000000000000000000000000000000000000002122 188.0
SHD1_k127_953449_1 PFAM magnesium chelatase ChlI subunit K07391 - - 0.0009645 43.0
SHD1_k127_955168_0 succinylglutamate desuccinylase aspartoacylase K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000006075 233.0
SHD1_k127_955168_1 PFAM DinB family protein - - - 0.00000000000000000000000000000000000000000006812 165.0
SHD1_k127_955168_2 Protein of unknown function (DUF1361) - - - 0.00000000000000000000000000000000000006805 152.0
SHD1_k127_961363_0 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 389.0
SHD1_k127_961363_1 phosphate ion binding K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008455 318.0
SHD1_k127_961363_10 efflux transmembrane transporter activity K02004 - - 0.0000002031 63.0
SHD1_k127_961363_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000003733 213.0
SHD1_k127_961363_3 - - - - 0.000000000000000000000000000000000000006685 152.0
SHD1_k127_961363_4 - - - - 0.00000000000000000000000000000000001541 149.0
SHD1_k127_961363_5 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000001832 136.0
SHD1_k127_961363_6 nitrate reductase activity - - - 0.000000000000000000000000000000114 131.0
SHD1_k127_961363_7 Squalene/phytoene synthase K00801 - 2.5.1.21 0.0000000000000000000000000000004678 134.0
SHD1_k127_961363_8 Aminoacyl-tRNA editing domain - - - 0.0000000000000000000123 94.0
SHD1_k127_961363_9 Aminoacyl-tRNA editing domain - - - 0.00000000000000002782 83.0
SHD1_k127_966319_0 NTF2-like N-terminal transpeptidase domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 601.0
SHD1_k127_966319_1 PFAM Maf family protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000001083 228.0
SHD1_k127_966319_2 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis K03816 - 2.4.2.22 0.00000000000000000000000000000000000000000000000002548 182.0
SHD1_k127_970101_0 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 360.0
SHD1_k127_970101_1 short-chain dehydrogenase K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005717 253.0
SHD1_k127_970101_3 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.00000000000000000000000000000000000000000000000193 176.0
SHD1_k127_970101_4 TIR domain K01724 - 4.2.1.96 0.0000000000000000004064 98.0
SHD1_k127_974330_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005906 456.0
SHD1_k127_974330_1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 328.0
SHD1_k127_974330_2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.00000000000000000000000000000000000000000000000000000000004414 211.0
SHD1_k127_974330_3 - - - - 0.000000000000000000000000000000000000000000002093 168.0
SHD1_k127_974330_4 acetyltransferase K03823 - 2.3.1.183 0.00000000000000000000000000000000002088 141.0
SHD1_k127_974330_5 phosphatidylcholine synthase K01004 - 2.7.8.24 0.00000000000000000000000321 106.0
SHD1_k127_974330_6 - - - - 0.000000000003701 69.0
SHD1_k127_984657_0 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 364.0
SHD1_k127_984657_1 alpha beta - - - 0.000000000000000000000000000000000000000000000002885 187.0
SHD1_k127_984657_2 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.000000000000005817 84.0
SHD1_k127_993408_0 Beta-lactamase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 543.0
SHD1_k127_993408_1 Nacht domain K13730 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 426.0
SHD1_k127_993408_2 TIGRFAM F420-dependent oxidoreductase K12234 - 6.3.2.31,6.3.2.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 334.0
SHD1_k127_993408_3 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008034 282.0
SHD1_k127_993408_4 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000001624 219.0
SHD1_k127_993408_5 Zn-ribbon protein possibly nucleic acid-binding K07164 - - 0.0000000000000000000000000000000000000000000000001283 185.0
SHD1_k127_993408_6 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - - - 0.0000000000000000000000000000004298 128.0
SHD1_k127_993408_7 PFAM Nitroreductase K04719,K19286 - 1.13.11.79,1.5.1.39 0.000000001175 63.0
SHD1_k127_993408_8 inorganic diphosphatase activity K01507 - 3.6.1.1 0.0000009727 54.0
SHD1_k127_995616_0 Flavin containing amine oxidoreductase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 437.0
SHD1_k127_995616_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000004869 71.0
SHD1_k127_995616_2 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.000000005287 59.0
SHD1_k127_995616_3 Psort location Cytoplasmic, score 8.96 - - - 0.00001778 53.0
SHD1_k127_997044_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 318.0
SHD1_k127_997044_1 domain protein K21687 - - 0.00000000009207 74.0
SHD1_k127_997044_2 WD40-like Beta Propeller Repeat K03641 - - 0.000000001595 69.0