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Overview

ID MAG03580
Name SRD3_bin.17
Sample SMP0090
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Terriglobia
Order Terriglobales
Family JAEZPW01
Genus
Species
Assembly information
Completeness (%) 93.36
Contamination (%) 5.25
GC content (%) 62.0
N50 (bp) 15,817
Genome size (bp) 4,012,660

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3328

Gene name Description KEGG GOs EC E-value Score Sequence
SRD3_k127_100469_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 478.0
SRD3_k127_100469_1 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000382 274.0
SRD3_k127_100469_2 - - - - 0.0000000000000000000000000000000000000000000000000000000006005 207.0
SRD3_k127_100469_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000002284 142.0
SRD3_k127_100469_4 - - - - 0.00000000000000000000000000002516 124.0
SRD3_k127_100469_5 4 iron, 4 sulfur cluster binding - - - 0.000000000000000009264 83.0
SRD3_k127_100469_6 CHASE3 domain - - - 0.0000000003223 71.0
SRD3_k127_100469_8 - - - - 0.00001362 51.0
SRD3_k127_1028391_0 Secretin and TonB N terminus short domain K02666 - - 7.163e-229 737.0
SRD3_k127_1028391_1 PFAM RNA-binding protein AU-1 Ribonuclease E G K08301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 573.0
SRD3_k127_1028391_10 phosphorelay signal transduction system - - - 0.00000000000000000000008042 102.0
SRD3_k127_1028391_2 Type IV pilus assembly protein PilM; K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 529.0
SRD3_k127_1028391_3 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 429.0
SRD3_k127_1028391_4 carbon utilization K02664,K02665,K12280 - - 0.00000000000000000000000000000000000000000000000000000000275 206.0
SRD3_k127_1028391_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000003784 186.0
SRD3_k127_1028391_6 PFAM Fimbrial assembly family protein K02663 - - 0.0000000000000000000000000000000005811 145.0
SRD3_k127_1028391_7 response regulator, receiver - - - 0.000000000000000000000000002522 115.0
SRD3_k127_1028391_9 Helix-turn-helix domain - - - 0.000000000000000000000005133 104.0
SRD3_k127_1029378_0 pfam abc K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 349.0
SRD3_k127_1029378_1 Biotin-lipoyl like K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 338.0
SRD3_k127_1029378_2 Putative adhesin - - - 0.00000000000000000000000000000000000000000000000000000001365 211.0
SRD3_k127_1029378_3 Bacterial regulatory proteins, tetR family K09017 - - 0.0000000000000000000000000000000000000000000000000005956 192.0
SRD3_k127_1029378_4 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.0000000000000000000000000000000000000000000000000009837 187.0
SRD3_k127_1039299_0 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 614.0
SRD3_k127_1039299_1 Type II IV secretion system protein K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 438.0
SRD3_k127_1044731_0 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006973 492.0
SRD3_k127_1044731_1 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 416.0
SRD3_k127_1044947_0 TonB-dependent Receptor Plug Domain K02014,K16092 - - 2.05e-217 697.0
SRD3_k127_1044947_1 Protein of unknown function (DUF763) K09003 - - 1.729e-205 644.0
SRD3_k127_1044947_10 - - - - 0.00000000001753 70.0
SRD3_k127_1044947_2 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 586.0
SRD3_k127_1044947_3 PFAM glutathionylspermidine synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008696 459.0
SRD3_k127_1044947_4 pfam abc K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 419.0
SRD3_k127_1044947_5 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003792 382.0
SRD3_k127_1044947_6 Domain of unknown function (DUF374) K09778 - - 0.00000000000000000000000000000000000000000000000000001276 197.0
SRD3_k127_1044947_8 metal ion transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000001779 179.0
SRD3_k127_1045261_0 Histidine kinase K02482 - 2.7.13.3 2.839e-300 955.0
SRD3_k127_1045261_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 1.19e-233 740.0
SRD3_k127_1045261_2 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001103 263.0
SRD3_k127_1045261_3 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000000000000000000001254 200.0
SRD3_k127_1045261_4 Response regulator, receiver - - - 0.00000000000000000000000000000000001907 142.0
SRD3_k127_1045261_5 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000000000000002544 96.0
SRD3_k127_1064249_0 ATPase BadF BadG BcrA BcrD type - - - 2.414e-311 984.0
SRD3_k127_1064249_1 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 6.129e-264 831.0
SRD3_k127_1064249_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000004761 232.0
SRD3_k127_1064249_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000009482 229.0
SRD3_k127_1064249_12 AMMECR1 K09141 - - 0.000000000000000000000000000000000000000000000000000000000000001611 223.0
SRD3_k127_1064249_13 phosphinothricin N-acetyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000352 208.0
SRD3_k127_1064249_14 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000000000004301 167.0
SRD3_k127_1064249_15 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000000000000000002696 158.0
SRD3_k127_1064249_16 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000000000000000000000000007282 128.0
SRD3_k127_1064249_17 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic - - - 0.00000000000000000000000000000214 125.0
SRD3_k127_1064249_18 Domain of unknown function (DUF1905) - - - 0.00000000000000000000000000001474 125.0
SRD3_k127_1064249_19 Protein of unknown function (DUF2393) - - - 0.0000000000000000000000000003414 120.0
SRD3_k127_1064249_2 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 3.88e-263 819.0
SRD3_k127_1064249_3 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 3.588e-235 737.0
SRD3_k127_1064249_4 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 409.0
SRD3_k127_1064249_5 4 iron, 4 sulfur cluster binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 397.0
SRD3_k127_1064249_6 Domain of unknown function (DUF4382) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 329.0
SRD3_k127_1064249_7 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 305.0
SRD3_k127_1064249_8 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 286.0
SRD3_k127_1064249_9 PFAM pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008717 244.0
SRD3_k127_1064756_0 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 529.0
SRD3_k127_1064756_1 PFAM Band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 372.0
SRD3_k127_1093148_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0 1088.0
SRD3_k127_1093148_1 surface antigen variable number - - - 1.257e-275 885.0
SRD3_k127_1093148_10 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 337.0
SRD3_k127_1093148_11 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004834 288.0
SRD3_k127_1093148_12 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006756 277.0
SRD3_k127_1093148_13 BON domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002256 235.0
SRD3_k127_1093148_14 AMP binding - - - 0.000000000000000000000000000000000000000000000000000000000000001555 228.0
SRD3_k127_1093148_15 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000000000000004562 190.0
SRD3_k127_1093148_16 Protein of unknown function (DUF421) - - - 0.0000000000000000000000000000000000000000000000003163 183.0
SRD3_k127_1093148_17 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.0000000000000000000000000000000000001397 156.0
SRD3_k127_1093148_18 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.000000000000000000000000000000000009236 150.0
SRD3_k127_1093148_2 hydrolase family 65, central catalytic K01194,K01838,K04844,K05342 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0016787,GO:0030312,GO:0044464,GO:0071944 2.4.1.64,3.2.1.28,5.4.2.6 5.432e-252 801.0
SRD3_k127_1093148_20 PspC domain K03973 - - 0.00000000000000000000000000001257 121.0
SRD3_k127_1093148_21 membrane transporter protein - - - 0.000000000000000000000000001829 121.0
SRD3_k127_1093148_23 Gram-negative bacterial TonB protein C-terminal - - - 0.00000002746 56.0
SRD3_k127_1093148_24 Gram-negative bacterial TonB protein C-terminal - - - 0.0002932 45.0
SRD3_k127_1093148_3 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 1.538e-202 637.0
SRD3_k127_1093148_4 MoeZ MoeB K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 535.0
SRD3_k127_1093148_5 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 465.0
SRD3_k127_1093148_6 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 446.0
SRD3_k127_1093148_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 423.0
SRD3_k127_1093148_8 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007004 383.0
SRD3_k127_1093148_9 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008493 362.0
SRD3_k127_1104051_0 Bacterial regulatory protein, Fis family - - - 5.791e-239 747.0
SRD3_k127_1104051_1 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 542.0
SRD3_k127_1104051_2 (Rhomboid) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003494 275.0
SRD3_k127_1104051_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000003754 204.0
SRD3_k127_1104051_4 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000000000000000000000000000001653 153.0
SRD3_k127_1104051_6 - K05826 - - 0.000000000001703 69.0
SRD3_k127_1121584_0 PFAM peptidase U62 modulator of DNA gyrase - - - 2.211e-211 676.0
SRD3_k127_1121584_1 Peptidase M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 415.0
SRD3_k127_1121584_2 Protein of unknown function (DUF1453) - - - 0.000000000000000000000000000000000000000000000000001538 187.0
SRD3_k127_116397_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 6.849e-237 739.0
SRD3_k127_116397_1 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000001684 205.0
SRD3_k127_116397_2 Fic/DOC family K07341 - - 0.0000000000000000000000000000000004216 138.0
SRD3_k127_116397_3 SpoVT / AbrB like domain - - - 0.0000000000000000000001062 100.0
SRD3_k127_1168384_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 7.017e-312 975.0
SRD3_k127_1168384_1 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 362.0
SRD3_k127_1168384_2 Pseudouridine synthase K06180 - 5.4.99.23 0.00000000001152 70.0
SRD3_k127_1199614_0 ribulose-bisphosphate carboxylase activity K01601 - 4.1.1.39 7.216e-276 853.0
SRD3_k127_1199614_1 PFAM Polysaccharide export protein - - - 4.326e-248 795.0
SRD3_k127_1199614_10 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 365.0
SRD3_k127_1199614_11 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008376 321.0
SRD3_k127_1199614_12 Chain length determinant protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 311.0
SRD3_k127_1199614_13 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003022 286.0
SRD3_k127_1199614_14 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000002458 245.0
SRD3_k127_1199614_15 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000008031 243.0
SRD3_k127_1199614_16 CoA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000006472 221.0
SRD3_k127_1199614_17 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000001116 204.0
SRD3_k127_1199614_18 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000133 187.0
SRD3_k127_1199614_19 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000009909 155.0
SRD3_k127_1199614_2 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 531.0
SRD3_k127_1199614_20 Universal stress protein - - - 0.000000000000000000000000000000000002166 150.0
SRD3_k127_1199614_21 Nucleotidyltransferase domain - - - 0.0000000000000000000000000000000000351 149.0
SRD3_k127_1199614_22 Succinoglycan biosynthesis protein ExoO K16555 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000007657 118.0
SRD3_k127_1199614_23 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.000000414 58.0
SRD3_k127_1199614_24 Polysaccharide biosynthesis protein - - - 0.00001287 57.0
SRD3_k127_1199614_25 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0002345 49.0
SRD3_k127_1199614_26 Aldolase K08321,K11645,K18287 - 2.3.1.245,4.1.2.13,4.1.2.56 0.0003338 46.0
SRD3_k127_1199614_27 O-Antigen ligase - - - 0.0003471 53.0
SRD3_k127_1199614_3 PFAM FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 530.0
SRD3_k127_1199614_4 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007706 432.0
SRD3_k127_1199614_5 uridine kinase K00855 - 2.7.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039 436.0
SRD3_k127_1199614_6 Glycosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 405.0
SRD3_k127_1199614_7 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 399.0
SRD3_k127_1199614_8 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 383.0
SRD3_k127_1199614_9 Domains FehydlgC, FeS, sigma54 interaction, HTH8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 372.0
SRD3_k127_120719_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1502.0
SRD3_k127_120719_1 ABC transporter K06158 - - 5.473e-281 880.0
SRD3_k127_120719_2 - - - - 0.00000000000000000000000000000000000001314 148.0
SRD3_k127_120719_3 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000005991 84.0
SRD3_k127_1222753_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 548.0
SRD3_k127_1222753_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009465 553.0
SRD3_k127_1222753_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002067 267.0
SRD3_k127_1222753_3 - - - - 0.00000000000000000000000000000000000000000000000000000001143 203.0
SRD3_k127_1222753_4 - - - - 0.000000000000000000000001322 115.0
SRD3_k127_1222753_5 - - - - 0.000000000000000004298 87.0
SRD3_k127_1222753_9 - - - - 0.0008796 48.0
SRD3_k127_1224571_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000006892 216.0
SRD3_k127_1224571_1 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000005255 209.0
SRD3_k127_1224571_2 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000003155 163.0
SRD3_k127_1224571_3 - - - - 0.0000000000000000000000000000000000001348 153.0
SRD3_k127_1224571_4 Bacterial DNA-binding protein K03530 - - 0.0000000000000000000000000000000000003225 144.0
SRD3_k127_1224571_5 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000007458 143.0
SRD3_k127_1224571_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000008783 132.0
SRD3_k127_1224571_7 PFAM outer membrane efflux protein - - - 0.00000000000000000000000002357 126.0
SRD3_k127_1224571_8 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000009351 97.0
SRD3_k127_122819_0 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 486.0
SRD3_k127_122819_1 Gas vesicle - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 326.0
SRD3_k127_122819_2 Conserved hypothetical protein (DUF2461) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 286.0
SRD3_k127_122819_3 SnoaL-like domain - - - 0.0000000000000000000000000002156 117.0
SRD3_k127_122819_4 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000001198 101.0
SRD3_k127_122819_6 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676,K18917 - 1.20.4.3 0.00000000001945 70.0
SRD3_k127_1230266_0 Dienelactone hydrolase family - - - 6.12e-296 930.0
SRD3_k127_1230266_1 ABC transporter K11085 - - 9.649e-267 833.0
SRD3_k127_1230266_10 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 332.0
SRD3_k127_1230266_11 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000458 289.0
SRD3_k127_1230266_12 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000001773 253.0
SRD3_k127_1230266_13 Ribosomal subunit interface protein K05808 - - 0.00000000000000000000000000000000000000000000000000000000007427 210.0
SRD3_k127_1230266_14 - - - - 0.000000000000000000000000000000000000000000000000000004359 192.0
SRD3_k127_1230266_15 RDD family - - - 0.00000000000000000000000000000003681 134.0
SRD3_k127_1230266_16 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000334 81.0
SRD3_k127_1230266_2 single-stranded-DNA-specific exonuclease RecJ K07462 - - 3.102e-215 683.0
SRD3_k127_1230266_3 lipopolysaccharide transport K09774 - - 3.945e-206 668.0
SRD3_k127_1230266_4 RNA polymerase sigma-54 factor K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 603.0
SRD3_k127_1230266_5 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 593.0
SRD3_k127_1230266_6 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 488.0
SRD3_k127_1230266_7 ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 406.0
SRD3_k127_1230266_8 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 407.0
SRD3_k127_1230266_9 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 374.0
SRD3_k127_1236502_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 3.694e-313 964.0
SRD3_k127_1236502_1 Ami_3 K01448 - 3.5.1.28 1.394e-216 695.0
SRD3_k127_1236502_10 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002427 252.0
SRD3_k127_1236502_11 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000006976 206.0
SRD3_k127_1236502_12 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000006647 154.0
SRD3_k127_1236502_13 Polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000005285 94.0
SRD3_k127_1236502_2 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007376 499.0
SRD3_k127_1236502_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008782 417.0
SRD3_k127_1236502_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004543 403.0
SRD3_k127_1236502_5 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 404.0
SRD3_k127_1236502_6 PFAM DAHP synthetase I K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 387.0
SRD3_k127_1236502_7 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006121 296.0
SRD3_k127_1236502_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003642 269.0
SRD3_k127_1236502_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005392 250.0
SRD3_k127_1271039_0 serine-type peptidase activity - - - 0.0 1139.0
SRD3_k127_1271039_1 X-Pro dipeptidyl-peptidase (S15 family) - - - 8.627e-258 810.0
SRD3_k127_1271039_2 cellulose binding - - - 1.215e-238 777.0
SRD3_k127_1271039_3 AMP-dependent synthetase and ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 516.0
SRD3_k127_1271039_4 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000097 339.0
SRD3_k127_1271039_5 BON domain K04065 - - 0.00000000000000000000000000000000000000000005578 167.0
SRD3_k127_1271039_6 Protein of unknown function (DUF507) K09804 - - 0.0000000000000000000000000000000003659 138.0
SRD3_k127_1271039_7 Major Facilitator Superfamily K08177 - - 0.0000000000000000000000000000000005344 136.0
SRD3_k127_1271039_8 Protein of unknown function (DUF507) - - - 0.0000000000000000000000000000002278 127.0
SRD3_k127_1271039_9 - - - - 0.0000000000000000009603 87.0
SRD3_k127_1273267_0 AAA ATPase K07478 - - 1.108e-206 650.0
SRD3_k127_1273267_1 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 409.0
SRD3_k127_1273267_2 CoA binding domain K06929 - - 0.000000000000000000000000000000000000000000000000002075 184.0
SRD3_k127_1273267_3 antisigma factor binding K03090,K04749,K06378 - - 0.0000002899 57.0
SRD3_k127_1331774_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 4.996e-320 986.0
SRD3_k127_1331774_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 284.0
SRD3_k127_1331774_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003164 241.0
SRD3_k127_1331774_3 gluconolactonase activity K14274 - - 0.00001881 53.0
SRD3_k127_13394_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 6.946e-195 617.0
SRD3_k127_13394_1 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 491.0
SRD3_k127_13394_10 Malate synthase K01638 - 2.3.3.9 0.0000000000000000000009112 96.0
SRD3_k127_13394_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009816 430.0
SRD3_k127_13394_3 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 306.0
SRD3_k127_13394_4 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007436 298.0
SRD3_k127_13394_5 Dihydrodipicolinate reductase, C-terminus K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003426 282.0
SRD3_k127_13394_6 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000000000000000000000000000000000000001225 223.0
SRD3_k127_13394_8 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000004341 194.0
SRD3_k127_13394_9 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000009492 122.0
SRD3_k127_1391641_0 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 523.0
SRD3_k127_1391641_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 530.0
SRD3_k127_1391641_10 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000414 176.0
SRD3_k127_1391641_11 Domain of unknown function (DUF4337) - - - 0.000000000000000000000000000000001451 136.0
SRD3_k127_1391641_12 Cytochrome c - - - 0.00000000000002822 76.0
SRD3_k127_1391641_2 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401 428.0
SRD3_k127_1391641_3 Cytochrome c554 and c-prime K03620 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 406.0
SRD3_k127_1391641_4 Curli production assembly/transport component CsgG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004892 376.0
SRD3_k127_1391641_5 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 370.0
SRD3_k127_1391641_6 SMART tyrosine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 366.0
SRD3_k127_1391641_7 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 299.0
SRD3_k127_1391641_8 PGAP1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004284 261.0
SRD3_k127_1391641_9 Rieske [2Fe-2S] domain K00411,K02636,K03886 - 1.10.2.2,1.10.9.1 0.00000000000000000000000000000000000000000000004257 174.0
SRD3_k127_1398945_0 Tricorn protease homolog K08676 - - 0.0 1092.0
SRD3_k127_1398945_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000002504 205.0
SRD3_k127_1398945_2 Rubrerythrin - - - 0.00000000000000000000000000000000000000003949 157.0
SRD3_k127_1398945_3 Periplasmic or secreted lipoprotein - - - 0.0000000000000000000000002291 113.0
SRD3_k127_1398945_4 response regulator, receiver - - - 0.000000000000000000001502 99.0
SRD3_k127_1398945_5 NHL repeat - - - 0.00000000008364 74.0
SRD3_k127_140063_0 Ribosomal protein S1 K02945 - - 5.008e-289 899.0
SRD3_k127_140063_1 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000000000000000000000000002656 241.0
SRD3_k127_140063_10 Protein of unknown function DUF86 - - - 0.00000948 50.0
SRD3_k127_140063_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000001671 231.0
SRD3_k127_140063_3 phosphatase - - - 0.000000000000000000000000000000000000000000000000000000001385 203.0
SRD3_k127_140063_4 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000000000000004382 185.0
SRD3_k127_140063_5 - - - - 0.000000000000000000000000000007415 130.0
SRD3_k127_140063_6 Nucleotidyltransferase domain K07075 - - 0.00000000000000000005184 94.0
SRD3_k127_140063_7 - - - - 0.0000000000000001443 82.0
SRD3_k127_140063_8 - K21449 - - 0.0000000000000006551 82.0
SRD3_k127_140063_9 Protein of unknown function DUF86 - - - 0.00000768 53.0
SRD3_k127_140340_0 aldehyde oxidase and xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 3.742e-313 978.0
SRD3_k127_140340_1 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 370.0
SRD3_k127_140340_2 nitrite transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008643 368.0
SRD3_k127_140340_3 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs K13483 - - 0.000000000000000000000000000000000000000000000000000000000000000005592 228.0
SRD3_k127_140340_4 TIGRFAM respiratory nitrate reductase, gamma subunit K00374 - 1.7.5.1 0.0000000000000000000000000000000000000000000001234 178.0
SRD3_k127_140340_5 - - - - 0.0000000000001835 74.0
SRD3_k127_1418690_0 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000119 255.0
SRD3_k127_1418690_1 Bacterial Peptidase A24 N-terminal domain K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000002612 257.0
SRD3_k127_1418690_2 - - - - 0.00000000000000000000000000000000000000000000004768 177.0
SRD3_k127_1418690_3 NnrS protein - - - 0.00000000000000000000000000001642 132.0
SRD3_k127_1418690_4 Type IV pilus biogenesis stability protein PilW - - - 0.000000000000000000000000006308 119.0
SRD3_k127_1418690_5 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000002499 112.0
SRD3_k127_1418690_6 BON domain K04065 - - 0.00000000000001424 80.0
SRD3_k127_1425253_0 TIGRFAM Hopanoid biosynthesis associated radical SAM protein HpnJ - - - 2.265e-244 759.0
SRD3_k127_1425253_1 Dienelactone hydrolase family - - - 1.889e-217 694.0
SRD3_k127_1425253_2 Pyridine nucleotide-disulphide oxidoreductase K00266,K00528,K17722 - 1.18.1.2,1.19.1.1,1.3.1.1,1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 494.0
SRD3_k127_1425253_4 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005693 261.0
SRD3_k127_1425253_6 Two component transcriptional regulator, winged helix family K02483,K18344 - - 0.000009512 55.0
SRD3_k127_1457846_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K00486 GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0009058,GO:0016491,GO:0019748,GO:0044550,GO:0055114 1.14.13.9 1.907e-206 649.0
SRD3_k127_1457846_1 Aminotransferase class-V K01556 - 3.7.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 491.0
SRD3_k127_14960_0 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 3.146e-197 633.0
SRD3_k127_14960_1 epimerase dehydratase K01710,K01784 - 4.2.1.46,5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 542.0
SRD3_k127_14960_10 YtkA-like - - - 0.0000002415 57.0
SRD3_k127_14960_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00066,K02472,K02474,K13015 - 1.1.1.132,1.1.1.136,1.1.1.336 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 460.0
SRD3_k127_14960_3 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000095 317.0
SRD3_k127_14960_4 phosphoglycolate phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002767 273.0
SRD3_k127_14960_5 Glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003261 268.0
SRD3_k127_14960_6 Phosphoesterase family K21302 - 3.1.3.64 0.0000000000000000000000000000000000000000000000000001173 199.0
SRD3_k127_14960_7 Peptidase family M49 - - - 0.0000000000000000000000000000000000000000002966 162.0
SRD3_k127_14960_8 PFAM LemA family K03744 - - 0.000000000000000000000000000000000000000001342 168.0
SRD3_k127_14960_9 metalloendopeptidase activity K03799 - - 0.0000000000000000000000000000001636 143.0
SRD3_k127_163460_0 Alpha amylase - - - 0.0 1588.0
SRD3_k127_163460_1 GTP-binding protein TypA K06207 - - 0.0 1006.0
SRD3_k127_163460_10 oligopeptide transport K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 556.0
SRD3_k127_163460_11 argininosuccinate lyase K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 529.0
SRD3_k127_163460_12 Aminotransferase, class V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005365 512.0
SRD3_k127_163460_13 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 509.0
SRD3_k127_163460_14 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 492.0
SRD3_k127_163460_16 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 432.0
SRD3_k127_163460_17 Transcriptional regulator, LysR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009365 406.0
SRD3_k127_163460_18 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 403.0
SRD3_k127_163460_19 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 395.0
SRD3_k127_163460_2 Oligopeptide transporter OPT - - - 5.378e-313 972.0
SRD3_k127_163460_20 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 396.0
SRD3_k127_163460_21 respiratory electron transport chain K03620 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0020037,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044569,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0071944,GO:0097159,GO:1901363,GO:1902494 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 338.0
SRD3_k127_163460_22 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 338.0
SRD3_k127_163460_23 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009125 318.0
SRD3_k127_163460_24 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 304.0
SRD3_k127_163460_25 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003711 297.0
SRD3_k127_163460_26 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005891 283.0
SRD3_k127_163460_27 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001724 275.0
SRD3_k127_163460_28 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000002399 239.0
SRD3_k127_163460_29 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000000000000000013 219.0
SRD3_k127_163460_3 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016151,GO:0016491,GO:0022900,GO:0030288,GO:0030313,GO:0031975,GO:0032991,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0044569,GO:0045333,GO:0046872,GO:0046914,GO:0055114,GO:0071944,GO:1902494 1.12.99.6 3.255e-304 939.0
SRD3_k127_163460_30 Acetyltransferase (GNAT) family K00619 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000000008679 212.0
SRD3_k127_163460_32 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000001133 209.0
SRD3_k127_163460_33 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000002406 203.0
SRD3_k127_163460_34 beta-N-acetylhexosaminidase activity - - - 0.0000000000000000000000000000000000000000000000002967 186.0
SRD3_k127_163460_35 - - - - 0.000000000000000000000000000000000000000000000001735 174.0
SRD3_k127_163460_36 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000003961 176.0
SRD3_k127_163460_37 spore germination K03605 - - 0.000000000000000000000000000000000000000000001896 171.0
SRD3_k127_163460_38 Regulates arginine biosynthesis genes K03402 - - 0.00000000000000000000000000000000000000000223 163.0
SRD3_k127_163460_39 carbon dioxide binding K04653 - - 0.00000000000000000000000002416 109.0
SRD3_k127_163460_4 cellulose binding - - - 1.988e-247 803.0
SRD3_k127_163460_41 Belongs to the UPF0235 family K09131 - - 0.00000000000000000001591 96.0
SRD3_k127_163460_5 3-isopropylmalate dehydratase activity K01703 GO:0003674,GO:0003824,GO:0003861,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009316,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.2.1.33,4.2.1.35 3.104e-220 690.0
SRD3_k127_163460_6 Arginosuccinate synthase K01940 - 6.3.4.5 3.081e-209 655.0
SRD3_k127_163460_7 Hydrogenase formation hypA family K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 587.0
SRD3_k127_163460_8 oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor K06282 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009897,GO:0009986,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044569,GO:0045333,GO:0048037,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071944,GO:0098552,GO:0098567,GO:1902494 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 565.0
SRD3_k127_163460_9 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005438 558.0
SRD3_k127_16548_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 7.189e-233 728.0
SRD3_k127_16548_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005211 287.0
SRD3_k127_16548_2 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.0000000000000000000000000000000000000000000000000000000003917 205.0
SRD3_k127_1667222_0 FAD linked oxidases, C-terminal domain K18930 - - 0.0 1335.0
SRD3_k127_1667222_1 Hydrogenase formation hypA family K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005095 599.0
SRD3_k127_1667222_2 HypF finger K04656 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 598.0
SRD3_k127_1667222_3 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 531.0
SRD3_k127_1667222_4 AIR synthase related protein, C-terminal domain K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 526.0
SRD3_k127_1667222_5 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000002768 241.0
SRD3_k127_1667222_6 HupF/HypC family K04653 - - 0.00000000000000000000000000000001591 128.0
SRD3_k127_1689029_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1043.0
SRD3_k127_1689029_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 379.0
SRD3_k127_1689029_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 337.0
SRD3_k127_1689029_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000000000000001545 234.0
SRD3_k127_1689029_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000000000006206 230.0
SRD3_k127_1689029_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000000003039 190.0
SRD3_k127_1689029_6 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000000000000000008366 111.0
SRD3_k127_1689029_7 Ribosomal protein L33 K02913 - - 0.000000000000000000007423 92.0
SRD3_k127_1689029_8 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000315 72.0
SRD3_k127_175121_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 1.435e-194 616.0
SRD3_k127_175121_1 cyclic nucleotide-binding K01420,K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009407 405.0
SRD3_k127_175121_2 PFAM PEBP family protein K06910 - - 0.000000000000000000000000000000000000000000000000000005176 195.0
SRD3_k127_175121_3 PFAM von Willebrand factor type A - - - 0.0000000000000000000000000000000000001374 154.0
SRD3_k127_175121_4 cyclic nucleotide binding K01420,K21556,K21562 - - 0.0000000000000000000000000000000000006332 141.0
SRD3_k127_1790628_0 peptide catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093 408.0
SRD3_k127_1790628_1 Glycine cleavage H-protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 312.0
SRD3_k127_1790628_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000004446 97.0
SRD3_k127_1790628_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000005583 59.0
SRD3_k127_182819_0 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 3.343e-226 722.0
SRD3_k127_182819_1 Permease family K06901 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 589.0
SRD3_k127_182819_2 deaminase activity K01488 GO:0003674,GO:0003824,GO:0004000,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006144,GO:0006152,GO:0006154,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009113,GO:0009116,GO:0009119,GO:0009163,GO:0009164,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042440,GO:0042451,GO:0042454,GO:0042455,GO:0042737,GO:0043094,GO:0043096,GO:0043101,GO:0043103,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046100,GO:0046101,GO:0046102,GO:0046103,GO:0046112,GO:0046128,GO:0046129,GO:0046130,GO:0046148,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:1901135,GO:1901136,GO:1901137,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 503.0
SRD3_k127_182819_3 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 366.0
SRD3_k127_182819_4 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000328 261.0
SRD3_k127_182819_5 MafB19-like deaminase K01485 - 3.5.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000005468 244.0
SRD3_k127_182819_6 D-glucuronyl C5-epimerase C-terminus - - - 0.00000000000000000000000000000000000000000000003052 187.0
SRD3_k127_182819_7 hydroperoxide reductase activity - - - 0.000001401 59.0
SRD3_k127_1833527_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 601.0
SRD3_k127_1833527_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000002107 196.0
SRD3_k127_1833527_2 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000004432 197.0
SRD3_k127_1833527_3 amino acid - - - 0.0000000000000000000000000000000000000000000000000005774 187.0
SRD3_k127_1833527_4 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000002389 162.0
SRD3_k127_1833527_5 peptidyl-prolyl isomerase K01802 - 5.2.1.8 0.00001669 57.0
SRD3_k127_1892298_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 565.0
SRD3_k127_1892298_1 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006485 519.0
SRD3_k127_1892298_10 Protein of unknown function (DUF2877) - - - 0.00000139 59.0
SRD3_k127_1892298_2 Protein of unknown function (DUF1385) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 448.0
SRD3_k127_1892298_3 Coenzyme A transferase K01028 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009159 364.0
SRD3_k127_1892298_4 Coenzyme A transferase K01029 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 361.0
SRD3_k127_1892298_5 CoA-ligase K01902,K02381 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009361,GO:0032991,GO:0042709,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:1902494 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000001329 266.0
SRD3_k127_1892298_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002771 264.0
SRD3_k127_1892298_7 PFAM secretion protein HlyD family protein K02005,K02022 - - 0.0000000000000000000000000000000000000000000000000000000006198 218.0
SRD3_k127_1892298_8 PFAM secretion protein HlyD family protein K02005,K02022 - - 0.0000000000000000000000000000000000000000000000000006546 201.0
SRD3_k127_1892298_9 Periplasmic or secreted lipoprotein - - - 0.0000000000000000000000000000000003001 140.0
SRD3_k127_1892747_0 PFAM Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009961 353.0
SRD3_k127_1892747_1 Cytochrome c K00413 - - 0.0000000000000000000000000000000000000000000000000000000000858 220.0
SRD3_k127_1892747_2 4'-phosphopantetheinyl transferase superfamily K06133 - - 0.00000000000000000000000000000000000000000000000000004936 196.0
SRD3_k127_1892747_3 histidine kinase A domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000002886 174.0
SRD3_k127_1892747_4 OsmC-like protein K07397 - - 0.0000000000000000000000000001866 122.0
SRD3_k127_1892747_6 PFAM short-chain dehydrogenase reductase SDR K15314 - - 0.000000006944 59.0
SRD3_k127_1892747_7 7TM receptor with intracellular HD hydrolase - - - 0.0007624 50.0
SRD3_k127_1901217_0 PFAM aminotransferase class I and II K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 520.0
SRD3_k127_1901217_1 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 521.0
SRD3_k127_1901217_2 Glycosyl transferases group 1 K13057 - 2.4.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 482.0
SRD3_k127_1901217_3 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 304.0
SRD3_k127_1901217_4 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000007548 117.0
SRD3_k127_1901217_5 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000005098 102.0
SRD3_k127_1903628_0 PFAM homocysteine S-methyltransferase K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 390.0
SRD3_k127_1903628_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003616 272.0
SRD3_k127_1903628_2 SAM (And some other nucleotide) binding motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003711 273.0
SRD3_k127_1903628_3 PP-loop family K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000001205 243.0
SRD3_k127_19296_0 transposase IS66 K07484 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 570.0
SRD3_k127_19296_1 PFAM IS66 Orf2 family protein K07484 - - 0.000000000000000000000000000000000000000000000000000001256 195.0
SRD3_k127_19296_2 Reverse transcriptase (RNA-dependent DNA polymerase) K00986,K15342 - 2.7.7.49 0.0000000000000000000000000001024 117.0
SRD3_k127_19296_3 Transposase K07483 - - 0.000000000000003305 82.0
SRD3_k127_1936663_0 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 373.0
SRD3_k127_1936663_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 308.0
SRD3_k127_1936663_2 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006831 299.0
SRD3_k127_1936663_3 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 297.0
SRD3_k127_1936663_4 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004405 262.0
SRD3_k127_1936663_5 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001142 231.0
SRD3_k127_1936663_6 PFAM 6-pyruvoyl tetrahydropterin K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000002259 216.0
SRD3_k127_1936663_7 PFAM Redoxin - - - 0.000000000000000000000000000000000000000000000000000003068 195.0
SRD3_k127_1936663_8 PFAM 6-pyruvoyl tetrahydropterin K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000001578 163.0
SRD3_k127_1936663_9 Glycosyl transferase family 21 - - - 0.00002073 48.0
SRD3_k127_1937582_0 ABC transporter, transmembrane K18889 - - 1.145e-229 721.0
SRD3_k127_1937582_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 527.0
SRD3_k127_1937582_2 Protein kinase domain K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009319 367.0
SRD3_k127_1937582_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007191 274.0
SRD3_k127_1937582_4 2'-5' RNA ligase superfamily - - - 0.000000000000000000000000000000000000000000000000000003777 195.0
SRD3_k127_1937582_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000005356 140.0
SRD3_k127_1937582_7 Conserved hypothetical protein 95 - - - 0.0000000001375 61.0
SRD3_k127_1959422_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370,K17050 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009898,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0031235,GO:0032991,GO:0042126,GO:0043436,GO:0043546,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0097159,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204,GO:2001057 1.7.5.1 0.0 1835.0
SRD3_k127_1959422_1 4Fe-4S dicluster domain K00184 - - 8.772e-292 927.0
SRD3_k127_1959422_10 - - - - 0.000000000000000000000000000000000000000000000000001187 186.0
SRD3_k127_1959422_11 Cytochrome c - - - 0.00000000000000000000000000000000000000000000002553 176.0
SRD3_k127_1959422_12 Cytochrome c - - - 0.000000000000000000000000000000000000000007669 166.0
SRD3_k127_1959422_13 cytochrome c - - - 0.00000000000000000000000000000000000000001072 160.0
SRD3_k127_1959422_14 chaperone-mediated protein complex assembly K00373,K17052 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016530,GO:0022607,GO:0034622,GO:0042126,GO:0042128,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0051131,GO:0065003,GO:0071704,GO:0071840,GO:0071941,GO:0140104,GO:2001057 - 0.0000000000000000000001047 109.0
SRD3_k127_1959422_15 transcriptional regulator, Rrf2 family - - - 0.0000000000000000004265 94.0
SRD3_k127_1959422_16 UPF0126 domain - - - 0.000000000000002616 78.0
SRD3_k127_1959422_17 - - - - 0.0001273 45.0
SRD3_k127_1959422_2 nitrate reductase beta subunit K00371 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009898,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0031235,GO:0032991,GO:0033554,GO:0042126,GO:0043436,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0048037,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204,GO:2001057 1.7.5.1 4.667e-223 702.0
SRD3_k127_1959422_3 PFAM Polysulphide reductase, NrfD - - - 2.553e-215 677.0
SRD3_k127_1959422_4 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 561.0
SRD3_k127_1959422_5 TrkA-N domain K03455,K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003404 553.0
SRD3_k127_1959422_6 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005151 395.0
SRD3_k127_1959422_7 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006468 320.0
SRD3_k127_1959422_8 nitrate reductase activity K00370,K00374,K02575 GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006950,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009628,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0036293,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0046906,GO:0048037,GO:0050896,GO:0055114,GO:0070469,GO:0070470,GO:0070482,GO:0071944,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000001495 219.0
SRD3_k127_1959422_9 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000008472 192.0
SRD3_k127_1960164_0 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007318 261.0
SRD3_k127_1960164_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K04109,K11178 - 1.17.1.4,1.3.7.9 0.0000000000000000000000000000000000000000000000000000000000000000001404 244.0
SRD3_k127_1960164_2 COGs COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K04108 - 1.3.7.9 0.000000000000000000000000000000000000000000000000000000005379 206.0
SRD3_k127_1960164_3 amidohydrolase K07045 - - 0.0000000000000166 76.0
SRD3_k127_1962561_0 Belongs to the TPP enzyme family K00156 - 1.2.5.1 6.951e-253 792.0
SRD3_k127_1962561_1 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009546 398.0
SRD3_k127_1962561_2 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 320.0
SRD3_k127_1962561_3 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 300.0
SRD3_k127_1962561_4 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000001776 233.0
SRD3_k127_196574_0 TIGRFAM FeS assembly protein SufB K09014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 558.0
SRD3_k127_196574_1 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000005351 233.0
SRD3_k127_196574_2 transcriptional regulator, Rrf2 family - - - 0.0000000000000000000000000000000000000007635 153.0
SRD3_k127_196574_3 antisigma factor binding - - - 0.000000000000001225 82.0
SRD3_k127_196574_4 antisigma factor binding - - - 0.00000000001181 74.0
SRD3_k127_1997280_0 PFAM peptidase S9A prolyl oligopeptidase domain protein beta-propeller K01354 - 3.4.21.83 3.027e-304 948.0
SRD3_k127_1997280_1 Aspartate-ammonia ligase K01914 - 6.3.1.1 7.596e-200 627.0
SRD3_k127_1997280_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 511.0
SRD3_k127_1997280_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009977 317.0
SRD3_k127_1997280_4 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001552 269.0
SRD3_k127_1997280_5 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000009116 263.0
SRD3_k127_1997280_6 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000003258 203.0
SRD3_k127_1997280_7 Belongs to the UPF0145 family - - - 0.000000000000000000000000000000000000000000000000005503 184.0
SRD3_k127_1997280_8 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000002717 162.0
SRD3_k127_1997280_9 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000000000002465 154.0
SRD3_k127_2000845_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 462.0
SRD3_k127_2000845_1 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 340.0
SRD3_k127_2000845_2 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000006917 214.0
SRD3_k127_2000845_3 Alpha beta hydrolase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000001187 76.0
SRD3_k127_2002341_0 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009361 398.0
SRD3_k127_2002341_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 349.0
SRD3_k127_2002341_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000001007 220.0
SRD3_k127_2008770_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 1.927e-301 932.0
SRD3_k127_2008770_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 5.46e-228 714.0
SRD3_k127_2008770_2 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 334.0
SRD3_k127_2008770_3 Phosphoesterase family K21302 - 3.1.3.64 0.00000000000000000000000000000000000000000000000000000000000000000000000003341 264.0
SRD3_k127_2008770_4 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000103 247.0
SRD3_k127_2008770_6 Hfq protein - - - 0.0000000000000000000000000000000000000000002358 164.0
SRD3_k127_2008770_8 Dodecin K09165 - - 0.00000001285 59.0
SRD3_k127_2008770_9 Disulphide bond corrector protein DsbC - - - 0.00008226 45.0
SRD3_k127_2026237_0 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.0 1616.0
SRD3_k127_2026237_1 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 508.0
SRD3_k127_2026237_3 hemerythrin HHE cation binding domain - - - 0.0000000000000000000004027 104.0
SRD3_k127_2026237_4 cAMP biosynthetic process K08884,K12132 - 2.7.11.1 0.00000000000001256 75.0
SRD3_k127_2031179_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 4.127e-269 851.0
SRD3_k127_2031179_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 8.973e-202 643.0
SRD3_k127_2031179_2 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 554.0
SRD3_k127_2031179_3 Histidine kinase K07709 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010043,GO:0010288,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031224,GO:0031226,GO:0035556,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070887,GO:0071241,GO:0071248,GO:0071284,GO:0071294,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 373.0
SRD3_k127_2031179_4 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000002022 233.0
SRD3_k127_2031179_5 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000051 78.0
SRD3_k127_204181_0 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006921 434.0
SRD3_k127_204181_1 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000001337 236.0
SRD3_k127_204181_2 GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000001251 147.0
SRD3_k127_204181_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000001713 119.0
SRD3_k127_2049364_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0 1230.0
SRD3_k127_2049364_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003732 576.0
SRD3_k127_2049364_10 - - - - 0.000000000001084 72.0
SRD3_k127_2049364_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 503.0
SRD3_k127_2049364_3 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 409.0
SRD3_k127_2049364_4 surface antigen variable number - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005061 355.0
SRD3_k127_2049364_5 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008128 324.0
SRD3_k127_2049364_6 Phage integrase family - - - 0.0000000000000000000000000000000000000003163 163.0
SRD3_k127_2049364_8 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000002605 115.0
SRD3_k127_20649_0 PFAM Na dependent nucleoside transporter K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 562.0
SRD3_k127_20649_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009118 545.0
SRD3_k127_20649_2 Pyrimidine nucleoside phosphorylase C-terminal domain K00756,K00758 GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009032,GO:0016740,GO:0016757,GO:0016758,GO:0016763,GO:0044424,GO:0044444,GO:0044464 2.4.2.2,2.4.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 486.0
SRD3_k127_20649_3 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006477 393.0
SRD3_k127_20649_4 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000004714 259.0
SRD3_k127_20649_5 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000001547 166.0
SRD3_k127_20649_6 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.000000000000000000000000000000000000001245 151.0
SRD3_k127_20649_7 - - - - 0.000000000000000000000000000000003248 136.0
SRD3_k127_20649_8 - - - - 0.0000000000000000000000002844 113.0
SRD3_k127_2066567_0 Squalene-hopene cyclase C-terminal domain K06045 - 4.2.1.129,5.4.99.17 6.605e-194 610.0
SRD3_k127_2066567_1 FAD dependent oxidoreductase K00514 - 1.3.5.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 557.0
SRD3_k127_2066567_10 membrane - - - 0.00000000000000000000000000000000001674 140.0
SRD3_k127_2066567_11 Phosphorylase superfamily K01243 - 3.2.2.9 0.00000000000000000000000000000000007458 143.0
SRD3_k127_2066567_12 TIGRFAM Hopanoid biosynthesis associated radical SAM protein HpnJ - - - 0.0000000000000000002331 90.0
SRD3_k127_2066567_2 Zinc-binding dehydrogenase K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 544.0
SRD3_k127_2066567_3 PFAM Alcohol dehydrogenase K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000587 535.0
SRD3_k127_2066567_4 TIGRFAM hopanoid-associated sugar epimerase K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009763 467.0
SRD3_k127_2066567_5 TIGRFAM Hopanoid biosynthesis associated radical SAM protein HpnH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 467.0
SRD3_k127_2066567_6 Squalene/phytoene synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 428.0
SRD3_k127_2066567_7 PFAM Squalene phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 342.0
SRD3_k127_2066567_8 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000006658 186.0
SRD3_k127_2066567_9 membrane - - - 0.000000000000000000000000000000000000000003121 158.0
SRD3_k127_2067139_0 Transposase K07484 - - 4.02e-214 672.0
SRD3_k127_2067139_1 PFAM IS66 Orf2 family protein K07484 - - 0.00000000000000000000000000000000000000000000000000000009118 201.0
SRD3_k127_2078293_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 578.0
SRD3_k127_2078293_1 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 341.0
SRD3_k127_2078293_2 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 300.0
SRD3_k127_2078293_3 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors - - - 0.0000000000000000000000000000000000000000000000006621 182.0
SRD3_k127_2078293_4 DoxX - - - 0.0000000000000000000000000000000000000008758 151.0
SRD3_k127_2092734_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.208e-231 728.0
SRD3_k127_2092734_1 Domain of unknown function (DUF4118) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005486 296.0
SRD3_k127_2095493_0 Alcohol dehydrogenase GroES domain protein - - - 1.037e-198 625.0
SRD3_k127_2095493_1 PFAM Mur ligase K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000054 538.0
SRD3_k127_2095493_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001046 273.0
SRD3_k127_2095493_3 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000007048 270.0
SRD3_k127_2095493_4 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001759 263.0
SRD3_k127_2095493_5 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008258 247.0
SRD3_k127_2095493_6 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000635 193.0
SRD3_k127_2095493_7 - - - - 0.000000000000000000000000000000000000000000000003843 184.0
SRD3_k127_2095493_8 Domain of unknown function (DUF4142) - - - 0.00000000000000123 88.0
SRD3_k127_2111021_0 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000001812 166.0
SRD3_k127_2111021_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000008479 89.0
SRD3_k127_2111021_2 Radical SAM domain protein - - - 0.0000000000000001641 79.0
SRD3_k127_2111021_3 cheY-homologous receiver domain - - - 0.0000000000000005606 87.0
SRD3_k127_2111021_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000004157 89.0
SRD3_k127_2111021_5 energy transducer activity - - - 0.0000000002186 74.0
SRD3_k127_2112615_0 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 471.0
SRD3_k127_2112615_1 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 349.0
SRD3_k127_2112615_2 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006836 272.0
SRD3_k127_2112615_3 negative regulation of phosphate transmembrane transport K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.00000000000000000000000000000000000000000000000000000000000000000000008407 247.0
SRD3_k127_2112615_4 PFAM von Willebrand factor type A - - - 0.000000000000000000000000000000000000000000000009993 184.0
SRD3_k127_2112615_5 PFAM secretion protein HlyD family protein K02005,K02022 - - 0.00000000000001882 79.0
SRD3_k127_2125657_0 Aldehyde dehydrogenase family K04072,K15515 - 1.1.1.1,1.2.1.10,1.2.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 608.0
SRD3_k127_2125657_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 600.0
SRD3_k127_2125657_10 synthase - - - 0.000000000000000000000000000000000000000000000000000004959 192.0
SRD3_k127_2125657_11 PHB/PHA accumulation regulator DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000001274 204.0
SRD3_k127_2125657_12 STAS domain K04749 - - 0.00000293 54.0
SRD3_k127_2125657_2 Belongs to the aldehyde dehydrogenase family K00128,K22445 - 1.2.1.3,1.2.99.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 457.0
SRD3_k127_2125657_3 Protein of unknown function (DUF1298) K00635 - 2.3.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009333 454.0
SRD3_k127_2125657_4 AMP-binding enzyme C-terminal domain K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 413.0
SRD3_k127_2125657_5 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 382.0
SRD3_k127_2125657_6 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 371.0
SRD3_k127_2125657_7 Abc transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 308.0
SRD3_k127_2125657_8 ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001646 261.0
SRD3_k127_2125657_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005403 243.0
SRD3_k127_2126518_0 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 4.368e-238 744.0
SRD3_k127_2127324_0 peptidyl-tyrosine sulfation - - - 9.767e-207 690.0
SRD3_k127_2127324_1 ABC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006021 559.0
SRD3_k127_2127324_2 C-terminal, D2-small domain, of ClpB protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003924 447.0
SRD3_k127_2127324_4 Aminoacyl-tRNA editing domain K19055 - - 0.0000000000000000000000000000000000000000000000000000004213 201.0
SRD3_k127_2127324_5 phosphorelay signal transduction system - - - 0.0000000000000000000000001587 108.0
SRD3_k127_2127324_6 Stage II sporulation protein K06381 - - 0.00000000000000008648 92.0
SRD3_k127_2127324_7 penicillin binding K05515 - 3.4.16.4 0.000273 52.0
SRD3_k127_2156263_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 6.612e-245 777.0
SRD3_k127_2156263_1 - - - - 0.000000000000000000000000000718 123.0
SRD3_k127_2170288_0 heat shock protein binding - - - 2.812e-265 833.0
SRD3_k127_2170288_1 heat shock protein binding - - - 6.072e-245 767.0
SRD3_k127_2170288_10 ATP:ADP antiporter activity K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000528 271.0
SRD3_k127_2170288_11 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000005612 255.0
SRD3_k127_2170288_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001595 251.0
SRD3_k127_2170288_13 FecR protein - - - 0.000000000000000000000000000000000000000001587 172.0
SRD3_k127_2170288_14 Capsule assembly protein Wzi - - - 0.00000000000000000000000000000000000003119 156.0
SRD3_k127_2170288_15 Surface antigen - - - 0.00001515 57.0
SRD3_k127_2170288_2 CHASE2 - - - 1.478e-204 662.0
SRD3_k127_2170288_4 Involved in the tonB-independent uptake of proteins - - - 4.102e-198 645.0
SRD3_k127_2170288_5 PFAM peptidase S8 and S53 subtilisin kexin sedolisin K08651 - 3.4.21.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 538.0
SRD3_k127_2170288_6 Sigma-54 interaction domain K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 357.0
SRD3_k127_2170288_7 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 336.0
SRD3_k127_2170288_8 ferredoxin-NADP+ reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 310.0
SRD3_k127_2177864_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 4.031e-199 625.0
SRD3_k127_2177864_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 463.0
SRD3_k127_2177864_2 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 403.0
SRD3_k127_2177864_3 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009308 345.0
SRD3_k127_2177864_4 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000682 244.0
SRD3_k127_2177864_5 DNA recombination K09760 - - 0.000000000000000000000000000000000000000000000000000000000000492 222.0
SRD3_k127_2177864_6 4Fe-4S binding domain K00176 - 1.2.7.3 0.00000000000000000000000000000000001372 138.0
SRD3_k127_2186216_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 6.158e-246 772.0
SRD3_k127_2186216_2 class II (D K K01893 - 6.1.1.22 5.391e-240 748.0
SRD3_k127_2186216_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 554.0
SRD3_k127_2186216_4 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 366.0
SRD3_k127_2186216_5 Arginase family K01476 - 3.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001327 263.0
SRD3_k127_2186216_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000614 213.0
SRD3_k127_2186216_7 acetyltransferase - - - 0.0000000000000000000000000000000002838 143.0
SRD3_k127_2186216_8 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000002534 109.0
SRD3_k127_2196078_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007761 530.0
SRD3_k127_2196078_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 482.0
SRD3_k127_2196078_2 - - - - 0.0000000000000000000000000000000000000000000000000002189 203.0
SRD3_k127_2196078_3 - - - - 0.00000000000000000000000000000000000003299 153.0
SRD3_k127_2215087_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1127.0
SRD3_k127_2215087_1 Pyruvate ferredoxin/flavodoxin oxidoreductase K00187 - 1.2.7.7 2.714e-219 690.0
SRD3_k127_2215087_10 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004833 277.0
SRD3_k127_2215087_11 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001163 274.0
SRD3_k127_2215087_12 PASTA domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000006206 230.0
SRD3_k127_2215087_13 YbbR-like protein - - - 0.000000000000000000000000000000000000000000000000000000002013 213.0
SRD3_k127_2215087_14 Pyruvate phosphate dikinase - - - 0.00000000000000000000000000000000000000000000002433 179.0
SRD3_k127_2215087_15 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000003593 180.0
SRD3_k127_2215087_16 carboxylic ester hydrolase activity K01563,K22318,K22319 - 3.8.1.5,6.1.3.1 0.0000000000000000000000000000000000000000000000621 182.0
SRD3_k127_2215087_17 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000002238 172.0
SRD3_k127_2215087_18 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000000000002063 135.0
SRD3_k127_2215087_19 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000000000175 128.0
SRD3_k127_2215087_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.664e-201 634.0
SRD3_k127_2215087_20 Domain present in PSD-95, Dlg, and ZO-1/2. K04771 - 3.4.21.107 0.0000000000000000001025 102.0
SRD3_k127_2215087_21 Protein of unknown function (DUF2905) - - - 0.000000000000000003472 91.0
SRD3_k127_2215087_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 578.0
SRD3_k127_2215087_4 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009306 573.0
SRD3_k127_2215087_5 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 449.0
SRD3_k127_2215087_6 Pyruvate:ferredoxin oxidoreductase core domain II K00186 - 1.2.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006786 431.0
SRD3_k127_2215087_7 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 408.0
SRD3_k127_2215087_8 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007716 402.0
SRD3_k127_2215087_9 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 363.0
SRD3_k127_2255033_0 dna ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 504.0
SRD3_k127_2255033_1 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002525 268.0
SRD3_k127_2255033_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000595 251.0
SRD3_k127_2285985_0 3-isopropylmalate dehydratase activity K01681,K01703,K01704,K17749 - 4.2.1.3,4.2.1.33,4.2.1.35 1.403e-228 726.0
SRD3_k127_2285985_1 Belongs to the peptidase M16 family - - - 9.379e-197 624.0
SRD3_k127_2285985_10 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001221 233.0
SRD3_k127_2285985_11 lactoylglutathione lyase activity K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000168 164.0
SRD3_k127_2285985_12 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000006193 183.0
SRD3_k127_2285985_13 FR47-like protein K03789 - 2.3.1.128 0.000000000000000000000000000000000162 137.0
SRD3_k127_2285985_14 Pfam:N_methyl_2 - - - 0.000000000000000000000000000001489 130.0
SRD3_k127_2285985_15 Hfq protein K03666 - - 0.000000000000000000000000000002117 122.0
SRD3_k127_2285985_2 Alcohol dehydrogenase GroES-associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006339 574.0
SRD3_k127_2285985_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 515.0
SRD3_k127_2285985_4 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006053 447.0
SRD3_k127_2285985_5 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005657 431.0
SRD3_k127_2285985_6 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 379.0
SRD3_k127_2285985_7 Histidine kinase K01768,K02482,K07315,K20977 - 2.7.13.3,3.1.3.3,4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 333.0
SRD3_k127_2285985_8 MoaE protein K21142 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 290.0
SRD3_k127_2285985_9 DJ-1/PfpI family K03152 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002333 269.0
SRD3_k127_2295410_0 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter MnhD K12141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 391.0
SRD3_k127_2295410_1 NADH dehydrogenase K14090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009193 344.0
SRD3_k127_2295410_2 NADH dehydrogenase - - - 0.00000000000000000000000000000001001 130.0
SRD3_k127_2295410_3 Hydrogenase 4 membrane K12140 - - 0.000000000000000000000000000000258 131.0
SRD3_k127_2312659_0 Hydrolase CocE NonD family K06978 - - 3e-253 796.0
SRD3_k127_2312659_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.383e-251 818.0
SRD3_k127_2312659_10 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000104 186.0
SRD3_k127_2312659_11 DNA replication, synthesis of RNA primer K04066 - - 0.000000000000000000000000000000000000000000002775 176.0
SRD3_k127_2312659_12 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000004287 155.0
SRD3_k127_2312659_13 - - - - 0.00000001061 64.0
SRD3_k127_2312659_14 Belongs to the peptidase M10A family K07761,K07999 GO:0001101,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009753,GO:0010033,GO:0010035,GO:0010038,GO:0016020,GO:0016787,GO:0019538,GO:0031224,GO:0031225,GO:0032502,GO:0040007,GO:0042221,GO:0043170,GO:0044238,GO:0044425,GO:0044464,GO:0046686,GO:0048519,GO:0048580,GO:0048583,GO:0048589,GO:0048831,GO:0050789,GO:0050793,GO:0050896,GO:0051093,GO:0051239,GO:0051241,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080186,GO:0140096,GO:1900055,GO:1900056,GO:1901564,GO:1901700,GO:1905622,GO:2000024,GO:2000026,GO:2000028,GO:2000241 - 0.00000001909 67.0
SRD3_k127_2312659_15 - - - - 0.000006897 51.0
SRD3_k127_2312659_2 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 4.95e-226 722.0
SRD3_k127_2312659_3 PA domain - - - 9.09e-220 693.0
SRD3_k127_2312659_4 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 479.0
SRD3_k127_2312659_5 Cellulose biosynthesis protein BcsQ K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 368.0
SRD3_k127_2312659_6 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000676 331.0
SRD3_k127_2312659_7 COGs COG4299 conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 321.0
SRD3_k127_2312659_8 FES K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008433 306.0
SRD3_k127_2312659_9 Redoxin - - - 0.000000000000000000000000000000000000000000000000001458 187.0
SRD3_k127_2357123_0 4Fe-4S dicluster domain - - - 3.296e-288 900.0
SRD3_k127_2357123_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.778e-279 866.0
SRD3_k127_2357123_2 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 487.0
SRD3_k127_2357123_3 Belongs to the mandelate racemase muconate lactonizing enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 487.0
SRD3_k127_2357123_4 signal sequence binding K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 304.0
SRD3_k127_2357123_5 PFAM cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000001078 247.0
SRD3_k127_2357123_6 TIGRFAM Caa(3)-type oxidase, subunit IV K02277 - 1.9.3.1 0.00000000008326 66.0
SRD3_k127_2357641_0 Serine carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007512 431.0
SRD3_k127_2357641_1 Formate/nitrite transporter K21990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 342.0
SRD3_k127_2357641_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 287.0
SRD3_k127_2357641_3 DUF218 domain - - - 0.000000000000000000000000000000000000000000000000000000000000006576 222.0
SRD3_k127_2357641_4 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.00000000000000000000000000000000000000000000008439 173.0
SRD3_k127_2357641_5 Low affinity iron permease - - - 0.0000000000000000000000000000000000001957 145.0
SRD3_k127_2520352_0 heat shock protein 70 K04043,K04044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009453 445.0
SRD3_k127_2520352_1 PFAM heat shock protein DnaJ K04082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 296.0
SRD3_k127_2520352_2 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002583 240.0
SRD3_k127_2520352_3 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000006644 173.0
SRD3_k127_2522693_0 Cytochrome c554 and c-prime - - - 0.0 1210.0
SRD3_k127_2522693_1 ASPIC and UnbV - - - 0.0 1080.0
SRD3_k127_2522693_10 PFAM SEC-C motif domain protein K07039 - - 0.000000000000000000000000000000000008423 143.0
SRD3_k127_2522693_11 Bacterial DNA-binding protein K03530 - - 0.00000000000000000000000000000000001064 137.0
SRD3_k127_2522693_12 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000002473 127.0
SRD3_k127_2522693_13 DinB superfamily - - - 0.00000000000000000000000000000004658 126.0
SRD3_k127_2522693_14 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000005493 87.0
SRD3_k127_2522693_15 Glycogen debranching enzyme - - - 0.00000000000001871 77.0
SRD3_k127_2522693_16 DinB superfamily - - - 0.0000000001 64.0
SRD3_k127_2522693_17 ADP-ribosylglycohydrolase - - - 0.0000000001514 64.0
SRD3_k127_2522693_18 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00000001402 57.0
SRD3_k127_2522693_19 Resolvase, N terminal domain - - - 0.00000002966 57.0
SRD3_k127_2522693_2 Carboxypeptidase regulatory-like domain - - - 4.4e-323 1026.0
SRD3_k127_2522693_21 cheY-homologous receiver domain - - - 0.0005965 51.0
SRD3_k127_2522693_3 ASPIC and UnbV - - - 1.387e-300 930.0
SRD3_k127_2522693_4 ASPIC and UnbV - - - 5.177e-270 840.0
SRD3_k127_2522693_5 ASPIC and UnbV - - - 1.467e-253 799.0
SRD3_k127_2522693_6 Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system K01194 - 3.2.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 618.0
SRD3_k127_2522693_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009754 467.0
SRD3_k127_2522693_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000423 392.0
SRD3_k127_2522693_9 cAMP biosynthetic process K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000432 323.0
SRD3_k127_2535105_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1334.0
SRD3_k127_2535105_1 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 5.733e-241 758.0
SRD3_k127_2535105_10 Carboxyl transferase domain K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009955 391.0
SRD3_k127_2535105_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007448 389.0
SRD3_k127_2535105_12 outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 378.0
SRD3_k127_2535105_13 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006183 363.0
SRD3_k127_2535105_14 PFAM Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006211 353.0
SRD3_k127_2535105_15 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 347.0
SRD3_k127_2535105_16 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007462 306.0
SRD3_k127_2535105_17 cAMP biosynthetic process K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002776 273.0
SRD3_k127_2535105_18 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000269 261.0
SRD3_k127_2535105_19 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000000000000000000000000000068 217.0
SRD3_k127_2535105_2 - - - - 2.145e-238 744.0
SRD3_k127_2535105_20 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000001321 225.0
SRD3_k127_2535105_21 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000000000000000000000000000000003629 202.0
SRD3_k127_2535105_22 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000004501 203.0
SRD3_k127_2535105_23 PAS fold - - - 0.000000000000000000000000000000000000000000000000004152 207.0
SRD3_k127_2535105_24 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000002559 185.0
SRD3_k127_2535105_25 acetyltransferase - - - 0.000000000000000000000000000000000000007149 151.0
SRD3_k127_2535105_26 Biotin-requiring enzyme K17490 - 2.1.3.1 0.00000000000000000000000000000000000001248 148.0
SRD3_k127_2535105_27 Outer membrane efflux protein K15725 - - 0.00000000000000000000000000001919 121.0
SRD3_k127_2535105_28 Ribosomal L32p protein family K02911 - - 0.000000000000000000000000001068 113.0
SRD3_k127_2535105_29 Pfam:N_methyl_2 - - - 0.0000000000000000000000006754 109.0
SRD3_k127_2535105_3 Alcohol dehydrogenase GroES domain protein - - - 2.068e-195 616.0
SRD3_k127_2535105_30 acetyltransferase - - - 0.000000000000000000007461 95.0
SRD3_k127_2535105_4 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 591.0
SRD3_k127_2535105_5 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 589.0
SRD3_k127_2535105_6 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 577.0
SRD3_k127_2535105_7 radical SAM domain protein K15045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 538.0
SRD3_k127_2535105_8 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 473.0
SRD3_k127_2535105_9 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 450.0
SRD3_k127_259497_0 FMN binding - - - 9.033e-230 722.0
SRD3_k127_259497_1 Iron hydrogenase small subunit K00123,K00336,K18332 - 1.12.1.3,1.17.1.9,1.6.5.3 0.00000000000000000000000000000000000000000000000000000000001847 214.0
SRD3_k127_259497_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000001514 142.0
SRD3_k127_259497_3 Type ii and iii secretion system protein - - - 0.000000006694 62.0
SRD3_k127_267396_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 499.0
SRD3_k127_267396_1 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 293.0
SRD3_k127_267396_2 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000003256 215.0
SRD3_k127_267396_3 Domain of unknown function (DUF2520) - - - 0.000000000000000000000000000000000000000000000000001684 196.0
SRD3_k127_267396_5 Cold shock protein K03704 - - 0.000000000000000000000000000001558 121.0
SRD3_k127_267396_6 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000001291 81.0
SRD3_k127_2678479_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 492.0
SRD3_k127_2678479_1 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 421.0
SRD3_k127_2678479_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 308.0
SRD3_k127_2678479_3 Probable zinc-ribbon domain - - - 0.0000000000000000000000000000000000000000000000000000000005969 202.0
SRD3_k127_2678479_4 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000007899 186.0
SRD3_k127_2678479_5 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000000000000000001992 178.0
SRD3_k127_2678479_6 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000002787 109.0
SRD3_k127_2678479_7 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000000151 92.0
SRD3_k127_272451_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 344.0
SRD3_k127_2724658_0 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 3.521e-225 706.0
SRD3_k127_2724658_1 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000002483 254.0
SRD3_k127_2724658_2 - - - - 0.00000000000000000000000000000005242 136.0
SRD3_k127_2724658_3 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.000000000000000000000009071 101.0
SRD3_k127_2783311_0 serine-type peptidase activity - - - 2.544e-233 738.0
SRD3_k127_2783311_1 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 437.0
SRD3_k127_2783311_2 Protein of unknown function (DUF503) K09764 - - 0.00000000000000000000000000000000005821 137.0
SRD3_k127_2783311_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000001165 135.0
SRD3_k127_2843928_0 PFAM Circadian clock protein KaiC central region K08482 - - 8.101e-250 778.0
SRD3_k127_2843928_1 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 587.0
SRD3_k127_2843928_2 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004061 376.0
SRD3_k127_2843928_3 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 355.0
SRD3_k127_2843928_4 Ferritin-like domain K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 298.0
SRD3_k127_2843928_5 - - - - 0.000000000000000000000000000000000000000005309 166.0
SRD3_k127_2843928_6 Bacterial regulatory proteins, tetR family K09017 - - 0.0000000000000000000000000000001278 133.0
SRD3_k127_2843928_7 PFAM KaiB domain K08481 - - 0.00000000000000000000000002998 113.0
SRD3_k127_2843928_8 PFAM response regulator receiver - - - 0.000000000000000000002958 108.0
SRD3_k127_2843928_9 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000003969 101.0
SRD3_k127_2853237_0 PFAM glycosyl transferase family 9 K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 331.0
SRD3_k127_2853237_1 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 293.0
SRD3_k127_2853237_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001221 250.0
SRD3_k127_2853237_3 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000004374 214.0
SRD3_k127_2853237_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000449 170.0
SRD3_k127_2853237_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000001481 156.0
SRD3_k127_2853237_6 energy transducer activity K03832 - - 0.0000001843 61.0
SRD3_k127_2855448_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.862e-209 661.0
SRD3_k127_2855448_1 Domain of unknown function (DUF3488) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 601.0
SRD3_k127_2855448_10 Ftsk_gamma K03466 - - 0.0000000000000000000000000000000000000000000000000005274 189.0
SRD3_k127_2855448_11 2'-5' RNA ligase superfamily K01975 - 3.1.4.58 0.00000000000000000000000000000000000000000000000007088 186.0
SRD3_k127_2855448_12 PFAM Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000005815 162.0
SRD3_k127_2855448_13 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000000000000000000002608 104.0
SRD3_k127_2855448_2 Belongs to the CinA family K03742 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 504.0
SRD3_k127_2855448_3 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 492.0
SRD3_k127_2855448_4 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 464.0
SRD3_k127_2855448_5 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 405.0
SRD3_k127_2855448_6 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 340.0
SRD3_k127_2855448_7 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008244 341.0
SRD3_k127_2855448_8 T4-like virus tail tube protein gp19 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004552 316.0
SRD3_k127_2855448_9 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000002513 193.0
SRD3_k127_2896401_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 1.951e-295 919.0
SRD3_k127_2896401_1 heavy metal translocating P-type ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 2.523e-272 861.0
SRD3_k127_2896401_10 Biogenesis protein K09792 - - 0.0000000000000000000000000000000000000000000000003907 184.0
SRD3_k127_2896401_11 2 iron, 2 sulfur cluster binding - - - 0.0000000000000000000000000000000000002872 146.0
SRD3_k127_2896401_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 1.713e-266 833.0
SRD3_k127_2896401_3 Cytochrome C and Quinol oxidase polypeptide I K00404 - 1.9.3.1 3.245e-258 801.0
SRD3_k127_2896401_4 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 1.439e-201 635.0
SRD3_k127_2896401_5 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006827 486.0
SRD3_k127_2896401_6 Cytochrome C oxidase, mono-heme subunit/FixO K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 352.0
SRD3_k127_2896401_7 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001059 281.0
SRD3_k127_2896401_8 Belongs to the PdxS SNZ family K06215 - 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002756 267.0
SRD3_k127_2896401_9 oxidoreductase activity, acting on diphenols and related substances as donors K00411 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000003945 235.0
SRD3_k127_2897821_0 Squalene-hopene cyclase C-terminal domain K06045 - 4.2.1.129,5.4.99.17 1.599e-320 991.0
SRD3_k127_2897821_1 May be involved in recombinational repair of damaged DNA K03631 - - 1.567e-245 769.0
SRD3_k127_2897821_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 496.0
SRD3_k127_2897821_3 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 434.0
SRD3_k127_2897821_4 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007957 358.0
SRD3_k127_2897861_0 Dipeptidyl carboxypeptidase K01284 - 3.4.15.5 3.203e-292 912.0
SRD3_k127_2897861_1 DNA polymerase X family K02347 - - 7.226e-277 863.0
SRD3_k127_2897861_10 Sel1-like repeats. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 418.0
SRD3_k127_2897861_11 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006163 364.0
SRD3_k127_2897861_12 Sh3 type 3 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 334.0
SRD3_k127_2897861_13 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009301 325.0
SRD3_k127_2897861_14 GlcNAc-PI de-N-acetylase K22135 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001116 284.0
SRD3_k127_2897861_15 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002426 273.0
SRD3_k127_2897861_16 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004254 273.0
SRD3_k127_2897861_17 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004734 250.0
SRD3_k127_2897861_18 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001261 251.0
SRD3_k127_2897861_19 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000002306 229.0
SRD3_k127_2897861_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 3.904e-272 843.0
SRD3_k127_2897861_20 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000000000000000000000000000000008839 212.0
SRD3_k127_2897861_21 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000003232 183.0
SRD3_k127_2897861_22 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000004668 178.0
SRD3_k127_2897861_23 esterase - - - 0.000000000000000000000000000000000000000002662 167.0
SRD3_k127_2897861_24 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000003601 165.0
SRD3_k127_2897861_25 - - - - 0.000000000000000000000000000000000000001185 154.0
SRD3_k127_2897861_26 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000005054 151.0
SRD3_k127_2897861_27 Belongs to the ATPase B chain family K02109 - - 0.00000000000000000000000000000000000482 142.0
SRD3_k127_2897861_28 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000000001925 134.0
SRD3_k127_2897861_29 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000000004525 142.0
SRD3_k127_2897861_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 5.274e-244 757.0
SRD3_k127_2897861_30 - - - - 0.000000000000000000000000000000262 124.0
SRD3_k127_2897861_31 Sortase family K07284 - 3.4.22.70 0.00000000000000000000000000002693 125.0
SRD3_k127_2897861_32 Belongs to the UPF0109 family K06960 - - 0.00000000000000000000000000005311 118.0
SRD3_k127_2897861_33 Cupin - - - 0.00000000000000000000000000351 114.0
SRD3_k127_2897861_34 - - - - 0.0000000000000000000000003607 112.0
SRD3_k127_2897861_35 TIGRFAM TonB K03832 - - 0.0000000000000000474 94.0
SRD3_k127_2897861_36 Domain of unknown function (DUF309) K09763 - - 0.00000000000001898 78.0
SRD3_k127_2897861_38 - - - - 0.000000000001428 70.0
SRD3_k127_2897861_4 Asparaginase K01444 - 3.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 497.0
SRD3_k127_2897861_5 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 477.0
SRD3_k127_2897861_6 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 462.0
SRD3_k127_2897861_7 thiamine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 460.0
SRD3_k127_2897861_8 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008521 425.0
SRD3_k127_2897861_9 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 419.0
SRD3_k127_2907271_0 diguanylate cyclase K02030,K06950,K16923 - - 0.0 1112.0
SRD3_k127_2907271_1 Zinc carboxypeptidase - - - 2.585e-225 714.0
SRD3_k127_2907271_2 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 382.0
SRD3_k127_2907271_3 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000006085 99.0
SRD3_k127_2910085_0 Outer membrane protein beta-barrel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 612.0
SRD3_k127_2910085_1 Acetokinase family K00929 - 2.7.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008248 375.0
SRD3_k127_2910085_2 PFAM Phosphate acetyl butaryl transferase K00634 - 2.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000005933 269.0
SRD3_k127_2910085_3 Isochorismatase family K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000003199 181.0
SRD3_k127_2910085_4 - - - - 0.00000000000000000000008322 99.0
SRD3_k127_2925511_0 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 539.0
SRD3_k127_2925511_1 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005134 461.0
SRD3_k127_2925511_10 LD-carboxypeptidase K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 332.0
SRD3_k127_2925511_11 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 319.0
SRD3_k127_2925511_12 The glycine cleavage system catalyzes the degradation of glycine K00605,K06980,K22086 - 1.5.99.5,2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 311.0
SRD3_k127_2925511_13 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 294.0
SRD3_k127_2925511_14 MgtC family K07507 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008624 243.0
SRD3_k127_2925511_15 Mur ligase middle domain K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000003457 181.0
SRD3_k127_2925511_16 bacterial (prokaryotic) histone like domain K03530 - - 0.0000000000000000000000000000000000000000000000004037 176.0
SRD3_k127_2925511_17 Domain of unknown function (DUF1844) - - - 0.00000000000000000000000000007518 125.0
SRD3_k127_2925511_18 - - - - 0.000000000000000000003181 99.0
SRD3_k127_2925511_19 amine dehydrogenase activity - - - 0.0000000000000000324 95.0
SRD3_k127_2925511_2 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000479 452.0
SRD3_k127_2925511_20 - - - - 0.000000000001389 76.0
SRD3_k127_2925511_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 417.0
SRD3_k127_2925511_4 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 400.0
SRD3_k127_2925511_5 Dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004032 394.0
SRD3_k127_2925511_6 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 391.0
SRD3_k127_2925511_7 acid phosphatase activity K03651 - 3.1.4.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 371.0
SRD3_k127_2925511_8 Zn peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 366.0
SRD3_k127_2925511_9 dUTPase K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007779 342.0
SRD3_k127_2930991_0 PFAM Polysulphide reductase, NrfD K00185 - - 1.679e-217 682.0
SRD3_k127_2930991_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006443 283.0
SRD3_k127_2930991_2 Protein of unknown function (DUF3341) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001351 243.0
SRD3_k127_2930991_3 4Fe-4S dicluster domain K00184 - - 0.000000000000000000005273 93.0
SRD3_k127_2940718_0 Organic Anion Transporter Polypeptide (OATP) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008616 410.0
SRD3_k127_2940718_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 382.0
SRD3_k127_2940718_2 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 357.0
SRD3_k127_2940718_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005379 284.0
SRD3_k127_2940718_4 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002395 267.0
SRD3_k127_2940718_5 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000000001151 228.0
SRD3_k127_2940718_6 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000001926 104.0
SRD3_k127_2944773_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006731 412.0
SRD3_k127_2944773_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 306.0
SRD3_k127_2944778_0 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 503.0
SRD3_k127_2944778_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 389.0
SRD3_k127_2944778_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000889 87.0
SRD3_k127_2961309_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007763 483.0
SRD3_k127_2961309_1 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 436.0
SRD3_k127_2969838_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 5.434e-269 835.0
SRD3_k127_2969838_1 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000001056 241.0
SRD3_k127_2969838_2 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000006363 173.0
SRD3_k127_2978263_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007991 415.0
SRD3_k127_2978263_1 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008669 347.0
SRD3_k127_2978263_2 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 302.0
SRD3_k127_2978263_3 RNA polymerase sigma factor K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004934 278.0
SRD3_k127_2978263_4 Domains REC, PAS, PAS, PP2C K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000002681 225.0
SRD3_k127_2978263_5 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000004322 211.0
SRD3_k127_2978263_7 integral membrane protein - - - 0.00000000000000000000005277 104.0
SRD3_k127_2978263_8 Protein of unknown function (DUF3106) - - - 0.000000000000000000002974 105.0
SRD3_k127_2978263_9 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.00000008338 58.0
SRD3_k127_3018872_0 HD domain - - - 1.234e-213 679.0
SRD3_k127_3018872_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 433.0
SRD3_k127_3018872_10 Polymer-forming cytoskeletal - - - 0.0001299 53.0
SRD3_k127_3018872_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 380.0
SRD3_k127_3018872_3 pfam abc K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 377.0
SRD3_k127_3018872_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002777 233.0
SRD3_k127_3018872_5 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000008967 176.0
SRD3_k127_3018872_6 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000002173 171.0
SRD3_k127_3018872_7 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000008532 168.0
SRD3_k127_3018872_8 Domain of unknown function (DUF4870) - - - 0.00000000000000000000000000286 116.0
SRD3_k127_3018872_9 Peroxiredoxin K03564 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.11.1.15 0.0000417 51.0
SRD3_k127_302076_0 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 608.0
SRD3_k127_302076_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 390.0
SRD3_k127_302076_10 Pfam Zn-finger in ubiquitin-hydrolases and other protein K03455 - - 0.0000000000000000000000000000000000005552 143.0
SRD3_k127_302076_11 - - - - 0.000000000000000000000001833 111.0
SRD3_k127_302076_12 nitric oxide dioxygenase activity - - - 0.0000000000000000000002773 106.0
SRD3_k127_302076_13 alkyl hydroperoxide reductase K03386,K03564 - 1.11.1.15 0.00000000241 59.0
SRD3_k127_302076_2 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 379.0
SRD3_k127_302076_3 Ferritin, Dps family protein K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 364.0
SRD3_k127_302076_4 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 341.0
SRD3_k127_302076_5 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007083 338.0
SRD3_k127_302076_6 PFAM thiamine monophosphate synthase K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000002864 199.0
SRD3_k127_302076_8 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000004535 186.0
SRD3_k127_302076_9 peroxiredoxin activity K03386 - 1.11.1.15 0.00000000000000000000000000000000000000008728 153.0
SRD3_k127_3029316_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 3.257e-268 834.0
SRD3_k127_3029316_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004415 419.0
SRD3_k127_3029316_2 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 383.0
SRD3_k127_3029316_3 TOBE domain K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 321.0
SRD3_k127_3029316_4 Molybdate ABC transporter K02018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009595 310.0
SRD3_k127_3029316_5 Biotin-lipoyl like K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 317.0
SRD3_k127_3029316_6 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 300.0
SRD3_k127_3029316_7 Bacterial extracellular solute-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000002524 217.0
SRD3_k127_3029316_8 methyltransferase activity K13613,K15677 - - 0.00000000000000000000000000000000003685 145.0
SRD3_k127_3029316_9 GyrI-like small molecule binding domain K15770 - - 0.0000000000003194 72.0
SRD3_k127_3030488_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 2.964e-234 732.0
SRD3_k127_3030488_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 605.0
SRD3_k127_3030488_2 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.000000000000000000001597 98.0
SRD3_k127_3030488_3 periplasmic or secreted lipoprotein - - - 0.0000000000000003374 79.0
SRD3_k127_3033101_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1466.0
SRD3_k127_3033101_1 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1035.0
SRD3_k127_3033101_10 nucleotide metabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 319.0
SRD3_k127_3033101_11 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002021 284.0
SRD3_k127_3033101_12 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002952 280.0
SRD3_k127_3033101_13 Protein involved in cellulose biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002454 267.0
SRD3_k127_3033101_14 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000003568 252.0
SRD3_k127_3033101_15 PFAM cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000005462 254.0
SRD3_k127_3033101_16 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000001944 227.0
SRD3_k127_3033101_17 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000003011 215.0
SRD3_k127_3033101_18 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009046,GO:0009605,GO:0009991,GO:0016787,GO:0019538,GO:0031667,GO:0042594,GO:0043170,GO:0044238,GO:0050896,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.13.22 0.00000000000000000000000000000000000000000000000000000001051 207.0
SRD3_k127_3033101_19 PFAM cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000009515 192.0
SRD3_k127_3033101_2 cellulose binding - - - 0.0 1012.0
SRD3_k127_3033101_20 Uncharacterized ACR, COG1993 K09137 - - 0.00000000000000000000000000000000000000000000000486 174.0
SRD3_k127_3033101_21 methyltransferase - - - 0.0000000000000000000000000000000000000000000005114 172.0
SRD3_k127_3033101_22 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000000000000005626 160.0
SRD3_k127_3033101_23 deoxyhypusine monooxygenase activity K00627,K02160,K07402 - 2.3.1.12 0.0000000000000000000000000000000000001203 156.0
SRD3_k127_3033101_24 - - - - 0.0000000000000000000000000005753 122.0
SRD3_k127_3033101_26 - - - - 0.000000000000711 72.0
SRD3_k127_3033101_27 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.00000003595 56.0
SRD3_k127_3033101_28 - - - - 0.00002086 53.0
SRD3_k127_3033101_29 - - - - 0.00009187 53.0
SRD3_k127_3033101_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 4.088e-254 785.0
SRD3_k127_3033101_4 Prokaryotic cytochrome b561 - - - 3.576e-236 751.0
SRD3_k127_3033101_5 PFAM Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 4.547e-195 625.0
SRD3_k127_3033101_6 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 482.0
SRD3_k127_3033101_7 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 436.0
SRD3_k127_3033101_8 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 365.0
SRD3_k127_3033101_9 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 357.0
SRD3_k127_309208_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0 1667.0
SRD3_k127_309208_1 Transglycosylase SLT domain K08309 - - 5.361e-207 672.0
SRD3_k127_309208_10 Putative zinc-finger - - - 0.00000000000000000000000000000006008 128.0
SRD3_k127_309208_11 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000002072 111.0
SRD3_k127_309208_12 Protein of unknown function (DUF1761) - - - 0.0000000000000000000000008018 111.0
SRD3_k127_309208_13 - - - - 0.00000000000000001709 85.0
SRD3_k127_309208_14 Belongs to the ompA family K03640 - - 0.00000004517 63.0
SRD3_k127_309208_2 Transketolase, pyrimidine binding domain K00162,K00167,K21417 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944,GO:0140030,GO:0140032 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 422.0
SRD3_k127_309208_3 Belongs to the UbiD family K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009657 353.0
SRD3_k127_309208_4 Dehydrogenase E1 component K00161,K00166,K11381,K21416 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 346.0
SRD3_k127_309208_5 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 330.0
SRD3_k127_309208_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 286.0
SRD3_k127_309208_7 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000000000423 213.0
SRD3_k127_309208_8 - - - - 0.0000000000000000000000000000000000000000000000000000002917 201.0
SRD3_k127_309208_9 - - - - 0.000000000000000000000000000000000000000000000000004889 187.0
SRD3_k127_310173_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 3.664e-280 869.0
SRD3_k127_310173_1 PFAM peptidase M48 Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001183 286.0
SRD3_k127_310173_2 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000000003597 165.0
SRD3_k127_3110366_0 peptidase K07386 - - 2.699e-288 900.0
SRD3_k127_3110366_1 lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004821 408.0
SRD3_k127_3110366_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 327.0
SRD3_k127_3110366_3 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 300.0
SRD3_k127_3110366_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001744 264.0
SRD3_k127_3110366_5 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000000000000000000000000002399 206.0
SRD3_k127_3110366_6 - - - - 0.00000000000000000000006264 104.0
SRD3_k127_3119300_0 Prokaryotic cytochrome b561 - - - 7.023e-254 799.0
SRD3_k127_3119300_1 NapC/NirT cytochrome c family, N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 606.0
SRD3_k127_3119300_2 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 593.0
SRD3_k127_3119300_3 Prolyl oligopeptidase K01322 - 3.4.21.26 0.00000000000000000000000000000000000000000000007074 176.0
SRD3_k127_3148185_0 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002039 259.0
SRD3_k127_3148185_1 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000000000001176 208.0
SRD3_k127_3148185_2 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000000000001201 124.0
SRD3_k127_3148185_3 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000001262 111.0
SRD3_k127_3148185_4 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000000000001108 72.0
SRD3_k127_3174861_0 Mur ligase middle domain K02558 - 6.3.2.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 535.0
SRD3_k127_3174861_1 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000007142 128.0
SRD3_k127_3177402_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 5.046e-277 873.0
SRD3_k127_3177402_1 Beta-eliminating lyase K01667 - 4.1.99.1 1.503e-253 790.0
SRD3_k127_3177402_10 Redoxin K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000001337 163.0
SRD3_k127_3177402_11 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000000000000000000000000000000003951 166.0
SRD3_k127_3177402_12 response to heat K07090 - - 0.0000000000000000000000000000000007301 133.0
SRD3_k127_3177402_13 - - - - 0.0000000000000000000000009187 118.0
SRD3_k127_3177402_14 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000004491 70.0
SRD3_k127_3177402_15 cheY-homologous receiver domain - - - 0.00000000005532 68.0
SRD3_k127_3177402_2 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 601.0
SRD3_k127_3177402_3 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005629 572.0
SRD3_k127_3177402_4 Stage II sporulation protein E K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005698 526.0
SRD3_k127_3177402_5 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005133 476.0
SRD3_k127_3177402_6 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 426.0
SRD3_k127_3177402_7 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 313.0
SRD3_k127_3177402_8 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009284 263.0
SRD3_k127_3177402_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001347 239.0
SRD3_k127_3199147_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 419.0
SRD3_k127_3208204_0 Glycosyl transferase, family 2 - - - 0.0 1437.0
SRD3_k127_3208204_1 COGs COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K12528 - - 5.017e-302 954.0
SRD3_k127_3208204_10 Catalyzes the conversion of dihydroorotate to orotate K17828 - 1.3.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 467.0
SRD3_k127_3208204_11 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 444.0
SRD3_k127_3208204_12 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 - 2.1.3.3,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009751 411.0
SRD3_k127_3208204_13 PFAM amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 389.0
SRD3_k127_3208204_15 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000709 248.0
SRD3_k127_3208204_16 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.000000000000000000000000000000000000000000000000000000000000005866 224.0
SRD3_k127_3208204_17 Putative thioesterase (yiiD_Cterm) - - - 0.000000000000000000000000000000000000000000000000000006085 193.0
SRD3_k127_3208204_18 Predicted membrane protein (DUF2339) - - - 0.0000000000000000000000000000000000000000000000000006856 201.0
SRD3_k127_3208204_19 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.00000000000000000000000000000000000000006568 162.0
SRD3_k127_3208204_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 3.169e-229 719.0
SRD3_k127_3208204_20 - - - - 0.000000000000000000000000000000002465 132.0
SRD3_k127_3208204_21 membrane - - - 0.00000000000000000000000000000001645 129.0
SRD3_k127_3208204_22 - - - - 0.000000000000000000000002759 107.0
SRD3_k127_3208204_23 FCD - - - 0.0000000000000000000022 96.0
SRD3_k127_3208204_24 EamA-like transporter family - - - 0.0000000000000000002874 93.0
SRD3_k127_3208204_26 - - - - 0.0000001373 56.0
SRD3_k127_3208204_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 7.189e-223 698.0
SRD3_k127_3208204_4 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 616.0
SRD3_k127_3208204_5 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00207,K12527,K17723 - 1.3.1.1,1.3.1.2,1.97.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005704 576.0
SRD3_k127_3208204_6 PFAM amidohydrolase K01464 - 3.5.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 556.0
SRD3_k127_3208204_7 Pyridoxal-phosphate dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 552.0
SRD3_k127_3208204_8 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 484.0
SRD3_k127_3208204_9 Amidohydrolase family K12960,K18456 - 3.5.4.28,3.5.4.31,3.5.4.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009652 473.0
SRD3_k127_3209742_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 9.016e-226 726.0
SRD3_k127_3209742_1 peptidase activity - - - 0.00000000000007144 72.0
SRD3_k127_3211521_0 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 1.527e-257 812.0
SRD3_k127_3211521_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 8.163e-203 642.0
SRD3_k127_3211521_10 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic - - - 0.000000000000000000000000000000005045 135.0
SRD3_k127_3211521_11 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000001359 98.0
SRD3_k127_3211521_12 Anti-sigma factor antagonist - - - 0.0000002214 57.0
SRD3_k127_3211521_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 5.445e-198 621.0
SRD3_k127_3211521_3 Belongs to the MurCDEF family K01924 - 6.3.2.8 1.125e-194 618.0
SRD3_k127_3211521_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009022 602.0
SRD3_k127_3211521_5 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 525.0
SRD3_k127_3211521_6 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008691 431.0
SRD3_k127_3211521_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 422.0
SRD3_k127_3211521_8 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 380.0
SRD3_k127_3211521_9 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000007374 209.0
SRD3_k127_3235512_0 Lysin motif K08307 - - 9.752e-240 758.0
SRD3_k127_3235512_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 4.403e-204 642.0
SRD3_k127_3235512_10 Periplasmic or secreted lipoprotein - - - 0.0000000000000000000000000000000000000000000000000006331 194.0
SRD3_k127_3235512_11 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000009473 186.0
SRD3_k127_3235512_12 - - - - 0.0000000000000000000000009243 106.0
SRD3_k127_3235512_15 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000007859 57.0
SRD3_k127_3235512_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 604.0
SRD3_k127_3235512_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 572.0
SRD3_k127_3235512_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 411.0
SRD3_k127_3235512_5 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 350.0
SRD3_k127_3235512_6 Cys/Met metabolism PLP-dependent enzyme K01739,K01760,K01761 - 2.5.1.48,4.4.1.11,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 335.0
SRD3_k127_3235512_7 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 314.0
SRD3_k127_3235512_8 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000002169 264.0
SRD3_k127_3235512_9 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000002289 207.0
SRD3_k127_3270742_0 acyl-CoA dehydrogenase activity K00249 - 1.3.8.7 0.0 1086.0
SRD3_k127_3270742_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1006.0
SRD3_k127_3270742_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 304.0
SRD3_k127_3270742_11 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006736 261.0
SRD3_k127_3270742_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006195 249.0
SRD3_k127_3270742_13 cellulose binding - - - 0.00000000000000000009183 102.0
SRD3_k127_3270742_2 oxidoreductase K00311,K00313 - 1.5.5.1 1.378e-285 888.0
SRD3_k127_3270742_3 amino acid transport K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 509.0
SRD3_k127_3270742_4 fatty acid beta-oxidation using acyl-CoA dehydrogenase K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008938 460.0
SRD3_k127_3270742_5 AIR synthase related protein, C-terminal domain K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 459.0
SRD3_k127_3270742_6 Ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004815 418.0
SRD3_k127_3270742_7 electron transfer activity K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007343 410.0
SRD3_k127_3270742_8 Cys/Met metabolism PLP-dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007518 372.0
SRD3_k127_3270742_9 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006657 363.0
SRD3_k127_32725_0 Involved in the tonB-independent uptake of proteins - - - 2.496e-197 647.0
SRD3_k127_32725_1 N-acetylmuramoyl-L-alanine amidase - - - 0.00000000000000000000001193 113.0
SRD3_k127_32725_2 TIGRFAM TonB K03832 - - 0.0000000000000000006732 100.0
SRD3_k127_32725_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000001185 87.0
SRD3_k127_32725_4 Las17-binding protein actin regulator - - - 0.000000001016 70.0
SRD3_k127_32725_5 localization factor protein PodJ K07126,K13582 - - 0.00000004794 65.0
SRD3_k127_32725_6 RRXRR protein - - - 0.0000003236 58.0
SRD3_k127_3274590_0 PFAM glycoside hydrolase family 3 K05349 - 3.2.1.21 7.517e-268 840.0
SRD3_k127_3274590_1 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 9.159e-247 773.0
SRD3_k127_3274590_2 AAA domain K02282 - - 0.00000000000000000002715 105.0
SRD3_k127_3291798_0 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007369 572.0
SRD3_k127_3291798_1 Belongs to the BshC family K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006824 528.0
SRD3_k127_3291798_2 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111,K01153 - 1.1.5.3,3.1.21.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 398.0
SRD3_k127_3291798_3 TIGRFAM MazG family protein K02428,K04765 - 3.6.1.66,3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005457 366.0
SRD3_k127_3291798_4 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 361.0
SRD3_k127_3291798_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 320.0
SRD3_k127_3291798_6 glycerophosphodiester phosphodiesterase activity K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000003158 207.0
SRD3_k127_3291798_7 - - - - 0.0000000000000000000000000000000000003873 143.0
SRD3_k127_3291798_8 - - - - 0.000000000000000000000000000004716 131.0
SRD3_k127_3291798_9 Alpha/beta hydrolase family - - - 0.0000000000000000000000001056 109.0
SRD3_k127_3366149_0 Protein of unknown function (DUF1343) - - - 6.704e-314 980.0
SRD3_k127_3366149_1 NeuB family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 523.0
SRD3_k127_3366149_2 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004251 414.0
SRD3_k127_3366149_3 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000004041 196.0
SRD3_k127_3366149_4 multi-organism process K03195 - - 0.0000000000000000000000000000000000000002148 164.0
SRD3_k127_3366149_5 - - - - 0.00000000000000000002775 93.0
SRD3_k127_3366149_6 OsmC-like protein - - - 0.0000000008766 63.0
SRD3_k127_3366283_0 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 431.0
SRD3_k127_3366283_1 Transcriptional regulator K03717 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 344.0
SRD3_k127_3366283_2 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000001907 83.0
SRD3_k127_3366283_3 Putative transmembrane protein (PGPGW) - - - 0.0000000000003344 72.0
SRD3_k127_3366283_4 - - - - 0.000000000005273 68.0
SRD3_k127_3366283_5 Domain of unknown function (DUF4440) - - - 0.0000000002548 68.0
SRD3_k127_3366283_6 - - - - 0.000000007473 65.0
SRD3_k127_3366283_7 - - - - 0.000001783 52.0
SRD3_k127_3366283_8 Response regulator receiver - - - 0.00004956 48.0
SRD3_k127_3367225_0 Transposase domain (DUF772) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009936 262.0
SRD3_k127_3367225_1 YoaP-like - - - 0.000000000000000000000000000000000000000000007881 172.0
SRD3_k127_3390859_0 Protein kinase domain K12132 - 2.7.11.1 3.167e-233 751.0
SRD3_k127_3390859_1 alpha beta alpha domain I - - - 5.83e-205 647.0
SRD3_k127_3390859_10 - - - - 0.0000000000000000000000000000000000008003 142.0
SRD3_k127_3390859_11 response regulator, receiver - - - 0.00000000000000000000001981 104.0
SRD3_k127_3390859_12 - - - - 0.000000000000000000004837 100.0
SRD3_k127_3390859_13 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000005215 51.0
SRD3_k127_3390859_14 Bacterial regulatory protein, Fis family K07713 - - 0.00003448 53.0
SRD3_k127_3390859_15 PilZ domain - - - 0.000776 48.0
SRD3_k127_3390859_2 PFAM Aminotransferase, class I K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 542.0
SRD3_k127_3390859_3 mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 510.0
SRD3_k127_3390859_4 PFAM Alcohol dehydrogenase zinc-binding domain protein K07119 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 458.0
SRD3_k127_3390859_5 Phosphomannose isomerase type I K01809 - 5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 341.0
SRD3_k127_3390859_6 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000003324 218.0
SRD3_k127_3390859_7 EVE domain - - - 0.00000000000000000000000000000000000000000000001606 173.0
SRD3_k127_3390859_8 PFAM flavin reductase domain protein FMN-binding protein - - - 0.000000000000000000000000000000000000000000003464 169.0
SRD3_k127_3390859_9 YCII-related domain - - - 0.0000000000000000000000000000000000001914 142.0
SRD3_k127_33973_0 Peptidase M56 - - - 8.921e-213 677.0
SRD3_k127_33973_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000704 582.0
SRD3_k127_33973_2 penicillin-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 530.0
SRD3_k127_33973_3 Efflux transporter, RND family, MFP subunit K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007566 516.0
SRD3_k127_33973_4 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 435.0
SRD3_k127_33973_5 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000516 414.0
SRD3_k127_33973_6 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 410.0
SRD3_k127_33973_7 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000001219 168.0
SRD3_k127_33973_8 endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000002713 165.0
SRD3_k127_34004_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.0 1292.0
SRD3_k127_34004_1 Peptidase M16 inactive domain K07263 - - 4.198e-270 854.0
SRD3_k127_34004_2 Insulinase (Peptidase family M16) - - - 5.89e-225 707.0
SRD3_k127_34004_3 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 526.0
SRD3_k127_34004_4 Biotin-lipoyl like K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 357.0
SRD3_k127_34004_5 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000003533 173.0
SRD3_k127_34004_7 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000001632 70.0
SRD3_k127_3447462_0 MreB/Mbl protein - - - 3.234e-221 702.0
SRD3_k127_3447462_1 DNA-K related protein - - - 1.882e-209 683.0
SRD3_k127_3447462_10 Domain of unknown function (DUF2760) - - - 0.0000000000000000000000000000000000001172 148.0
SRD3_k127_3447462_11 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000000000000000001626 137.0
SRD3_k127_3447462_12 - - - - 0.000000000000000000000000000000138 132.0
SRD3_k127_3447462_13 Sel1-like repeats. - - - 0.0000000000000000000000004889 119.0
SRD3_k127_3447462_14 - - - - 0.0000000000000000000000127 102.0
SRD3_k127_3447462_15 glycoside hydrolase family 38 K01191 - 3.2.1.24 0.000000000000000000000871 102.0
SRD3_k127_3447462_16 glycoside hydrolase family 38 K01191 - 3.2.1.24 0.0000000000000000008608 94.0
SRD3_k127_3447462_17 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000001384 87.0
SRD3_k127_3447462_18 - - - - 0.0000000002147 65.0
SRD3_k127_3447462_19 mannose metabolic process K01191 - 3.2.1.24 0.000051 49.0
SRD3_k127_3447462_2 Amidase K01426 - 3.5.1.4 5.092e-206 654.0
SRD3_k127_3447462_3 PFAM Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 458.0
SRD3_k127_3447462_4 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 343.0
SRD3_k127_3447462_5 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 336.0
SRD3_k127_3447462_6 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 305.0
SRD3_k127_3447462_7 PFAM tRNA rRNA methyltransferase, SpoU K02533 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004944 267.0
SRD3_k127_3447462_8 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000004583 239.0
SRD3_k127_3447462_9 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000000005368 186.0
SRD3_k127_3474468_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 1.962e-233 728.0
SRD3_k127_3474468_1 RecQ zinc-binding K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 597.0
SRD3_k127_3474468_2 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 554.0
SRD3_k127_3474468_3 Bacterial protein of unknown function (DUF885) K01322 - 3.4.21.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006016 454.0
SRD3_k127_3474468_4 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin K14645,K17734 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004938 262.0
SRD3_k127_3474468_5 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000013 205.0
SRD3_k127_3487385_0 Tricorn protease homolog - - - 0.0 1272.0
SRD3_k127_3487385_1 TIGRFAM Malto-oligosyltrehalose synthase K06044 - 5.4.99.15 0.0 1228.0
SRD3_k127_3487385_10 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001818 290.0
SRD3_k127_3487385_11 cytochrome C peroxidase - - - 0.000000000000000000000000000000000000000000000000000000002574 220.0
SRD3_k127_3487385_12 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000001028 105.0
SRD3_k127_3487385_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.613e-244 765.0
SRD3_k127_3487385_3 PFAM glycoside hydrolase family 77 K00705 - 2.4.1.25 2.788e-197 627.0
SRD3_k127_3487385_4 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 549.0
SRD3_k127_3487385_5 Peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004251 420.0
SRD3_k127_3487385_6 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004471 362.0
SRD3_k127_3487385_7 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 342.0
SRD3_k127_3487385_8 PFAM Thymidine kinase K00857 - 2.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005806 283.0
SRD3_k127_3487385_9 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007507 277.0
SRD3_k127_3522109_0 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 383.0
SRD3_k127_3522109_1 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 310.0
SRD3_k127_3522109_2 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001893 254.0
SRD3_k127_3522109_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001713 243.0
SRD3_k127_3522109_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000005113 51.0
SRD3_k127_367269_0 lipoprotein localization to outer membrane K02004,K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 492.0
SRD3_k127_367269_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 303.0
SRD3_k127_367269_2 Putative esterase - - - 0.00000000000000000000000000000000000000000000000005785 183.0
SRD3_k127_367269_3 PFAM glycoside hydrolase 15-related - - - 0.00000000000000000000000115 105.0
SRD3_k127_3725870_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01895 - 6.2.1.1 4.921e-247 775.0
SRD3_k127_3725870_1 Oligoendopeptidase f - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 391.0
SRD3_k127_3725870_2 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003997 253.0
SRD3_k127_378297_0 peptidyl-tyrosine sulfation - - - 2.872e-284 913.0
SRD3_k127_378297_1 Vault protein inter-alpha-trypsin domain K07114 - - 2.82e-281 888.0
SRD3_k127_378297_2 - K19693 - - 0.0000000000000000000000000000000000000000001108 163.0
SRD3_k127_3793186_0 Tetratricopeptide repeat - - - 0.0 1587.0
SRD3_k127_3793186_1 Psort location CytoplasmicMembrane, score - - - 3.686e-231 730.0
SRD3_k127_3793186_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 596.0
SRD3_k127_3793186_3 polysaccharide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 513.0
SRD3_k127_3793186_4 antisigma factor binding K04749 - - 0.000000000000000000000000000000000000000000008486 166.0
SRD3_k127_3793186_5 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B gamma epsilon subunits K16881 - 2.7.7.13,5.4.2.8 0.0000001501 64.0
SRD3_k127_3797728_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 1.788e-244 758.0
SRD3_k127_3797728_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K07516 - 1.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 542.0
SRD3_k127_3797728_2 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 295.0
SRD3_k127_3797728_3 GDP-mannose mannosyl hydrolase activity K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000001817 181.0
SRD3_k127_3809711_0 acetyl-CoA hydrolase K18118 - 2.8.3.18 1.251e-236 741.0
SRD3_k127_3809711_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005934 371.0
SRD3_k127_3809711_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 321.0
SRD3_k127_3809711_3 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 319.0
SRD3_k127_3809711_4 ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001084 278.0
SRD3_k127_3809711_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005358 252.0
SRD3_k127_3809711_6 PDZ DHR GLGF domain protein - - - 0.00000000000000000000000000000000000000000000000009973 194.0
SRD3_k127_3809711_7 Regulatory protein - - - 0.0000000000000000000000000000000000000000000000002701 183.0
SRD3_k127_3809711_8 PFAM Dienelactone hydrolase K01061 - 3.1.1.45 0.00007774 45.0
SRD3_k127_3818033_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 503.0
SRD3_k127_3818033_2 Tetratricopeptide repeat - - - 0.00000000000006081 85.0
SRD3_k127_3818033_3 - - - - 0.000000000004776 73.0
SRD3_k127_3819998_0 Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed K00626 GO:0003674,GO:0003824,GO:0003988,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000587 392.0
SRD3_k127_3819998_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 321.0
SRD3_k127_3819998_2 aminopeptidase N - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 305.0
SRD3_k127_3819998_3 PAP2 superfamily - - - 0.000000000002034 71.0
SRD3_k127_3819998_4 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0008741 42.0
SRD3_k127_3819998_5 Phosphoesterase, PA-phosphatase related - - - 0.0009448 50.0
SRD3_k127_3822489_0 Ferrous iron transport protein B K04759 - - 2.1e-249 784.0
SRD3_k127_3822489_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006729 574.0
SRD3_k127_3822489_2 SAICAR synthetase K01923,K13713 - 6.3.2.6,6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006043 456.0
SRD3_k127_3822489_3 PFAM Colicin V production K03558 - - 0.00000000000000000000000000000000000000000000000002265 186.0
SRD3_k127_3822489_4 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000311 188.0
SRD3_k127_3822489_5 Probably functions as a manganese efflux pump - - - 0.0000000000000000000000000000000000001441 144.0
SRD3_k127_3822489_6 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000033 139.0
SRD3_k127_3822489_7 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000000000000000000327 123.0
SRD3_k127_3822489_8 FeoA - - - 0.0000001149 57.0
SRD3_k127_3824376_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 5.361e-262 819.0
SRD3_k127_3824376_1 synthetase, class II (G H P K01892 - 6.1.1.21 7.821e-208 653.0
SRD3_k127_3824376_2 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005591 280.0
SRD3_k127_3824376_3 - - - - 0.000000000000000000000000000000000000000000000001881 180.0
SRD3_k127_3824376_4 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000003969 161.0
SRD3_k127_3824376_5 Protein of unknown function (DUF3788) - - - 0.000000000000000000000000000000000000000409 155.0
SRD3_k127_3824376_6 Acetyl-CoA hydrolase/transferase N-terminal domain K01067 - 3.1.2.1 0.0000000000000000000000432 104.0
SRD3_k127_3824376_7 Domain of unknown function (DUF4440) - - - 0.0001067 52.0
SRD3_k127_3826604_0 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000005937 223.0
SRD3_k127_3826604_1 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000002896 147.0
SRD3_k127_3826604_2 - - - - 0.00000000000000000000000000004949 128.0
SRD3_k127_3826604_3 methyltransferase - - - 0.0000002742 54.0
SRD3_k127_3838339_0 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007297 415.0
SRD3_k127_3838339_1 Glutamine--fructose-6-phosphate aminotransferase isomerizing K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 332.0
SRD3_k127_3838339_2 - - - - 0.0000000000000000000000000000000000000000000000000000000001749 218.0
SRD3_k127_3838339_3 - - - - 0.0000000000000000000000000000003796 134.0
SRD3_k127_3843049_0 Putative adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 353.0
SRD3_k127_3843049_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001879 282.0
SRD3_k127_3843049_2 - - - - 0.0000000000000000000000000000000000000000000000000000008316 206.0
SRD3_k127_3843049_3 ribonuclease activity - - - 0.000000000000000000000000000000000000000000002373 166.0
SRD3_k127_3843049_4 Putative zinc-finger - - - 0.00000000000000000000000000000000000000000002668 170.0
SRD3_k127_3843049_5 Ribbon-helix-helix protein, copG family - - - 0.000000000000000000003607 95.0
SRD3_k127_3845776_0 Sortilin, neurotensin receptor 3, - - - 0.0 1612.0
SRD3_k127_3845776_1 Penicillin amidase - - - 0.0 1066.0
SRD3_k127_3845776_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 319.0
SRD3_k127_3855017_0 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 525.0
SRD3_k127_3855017_1 ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 418.0
SRD3_k127_3855017_2 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000875 115.0
SRD3_k127_3855017_3 Uncharacterized protein family (UPF0051) K09014 - - 0.0000000000000000000000002326 105.0
SRD3_k127_3861706_0 Elongator protein 3, MiaB family, Radical SAM - - - 5.996e-202 642.0
SRD3_k127_3861706_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004329 554.0
SRD3_k127_3861706_10 PFAM Iron sulphur-containing domain, CDGSH-type - - - 0.0000000000000000000000000000000004646 134.0
SRD3_k127_3861706_11 Glycosyl hydrolase catalytic core - - - 0.000000000000001426 78.0
SRD3_k127_3861706_2 Polysaccharide biosynthesis protein K17947 - 5.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005336 536.0
SRD3_k127_3861706_3 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 529.0
SRD3_k127_3861706_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 517.0
SRD3_k127_3861706_5 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006665 499.0
SRD3_k127_3861706_6 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 468.0
SRD3_k127_3861706_7 Male sterility protein K12454 - 5.1.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007445 462.0
SRD3_k127_3861706_8 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000001298 209.0
SRD3_k127_3861706_9 DinB family - - - 0.0000000000000000000000000000000000000000000000000001567 194.0
SRD3_k127_3862161_0 Acetolactate synthase, large subunit K01652 - 2.2.1.6 5.321e-273 849.0
SRD3_k127_3869438_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000002452 244.0
SRD3_k127_3869438_1 DinB family - - - 0.0000000000000000000000000000000000000000000000000000000001019 207.0
SRD3_k127_3869438_2 TIGRFAM TonB K03832 - - 0.0000000000000000000000000000000000000000003846 168.0
SRD3_k127_3869438_3 Outer membrane protein (OmpH-like) K06142 - - 0.0000000000000000000000000000000000000001248 160.0
SRD3_k127_3879718_0 Malate synthase K01638 - 2.3.3.9 0.0 1178.0
SRD3_k127_3879718_1 Aldehyde dehydrogenase family K00141,K22187 - 1.2.1.28 2.204e-269 834.0
SRD3_k127_3879718_10 - - - - 0.000000000000000000000000000001782 131.0
SRD3_k127_3879718_11 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.000000000001248 82.0
SRD3_k127_3879718_12 Histidine kinase - - - 0.000000000003289 72.0
SRD3_k127_3879718_2 Amidohydrolase family - - - 9.086e-231 735.0
SRD3_k127_3879718_3 cell shape determining protein MreB K03569 - - 4.447e-212 662.0
SRD3_k127_3879718_4 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006728 546.0
SRD3_k127_3879718_5 Aminotransferase class I and II K14260 - 2.6.1.2,2.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 475.0
SRD3_k127_3879718_6 PFAM FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002896 411.0
SRD3_k127_3879718_7 Rod shape-determining protein MreC K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 357.0
SRD3_k127_3879718_8 shape-determining protein MreD K03571 - - 0.00000000000000000000000000000000000000000000000002846 191.0
SRD3_k127_3879718_9 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000002706 198.0
SRD3_k127_3894612_0 Amino acid permease - - - 3.569e-308 963.0
SRD3_k127_3894612_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007452 558.0
SRD3_k127_3894612_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006866 533.0
SRD3_k127_3894612_3 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K00082 - 1.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 325.0
SRD3_k127_3894612_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 291.0
SRD3_k127_3894612_5 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000005981 226.0
SRD3_k127_3894612_6 HD domain - - - 0.00000000000000000000000000000000000000000000000000000001128 205.0
SRD3_k127_3894612_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000001554 178.0
SRD3_k127_3894612_8 CoA binding domain K06929 - - 0.00000000000377 70.0
SRD3_k127_3898392_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 424.0
SRD3_k127_3898392_1 Belongs to the PdxS SNZ family K06215 - 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008084 304.0
SRD3_k127_3898392_2 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000005448 174.0
SRD3_k127_3903261_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1727.0
SRD3_k127_3903261_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 359.0
SRD3_k127_3903261_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 321.0
SRD3_k127_3903261_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004628 242.0
SRD3_k127_3903261_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000127 244.0
SRD3_k127_3903261_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000002233 188.0
SRD3_k127_3903261_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000005053 124.0
SRD3_k127_3903261_7 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000000000000002625 99.0
SRD3_k127_3903261_8 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000002564 82.0
SRD3_k127_3903263_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 481.0
SRD3_k127_3903263_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006195 413.0
SRD3_k127_3903263_2 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 367.0
SRD3_k127_3903263_3 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005711 349.0
SRD3_k127_3903263_4 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000000000000000000003689 215.0
SRD3_k127_3903263_5 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000000000000002668 195.0
SRD3_k127_3903263_6 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000000000005972 173.0
SRD3_k127_3903263_7 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000000000000000000000005564 164.0
SRD3_k127_3903263_8 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000005053 124.0
SRD3_k127_3903263_9 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000002889 75.0
SRD3_k127_3911174_0 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 457.0
SRD3_k127_3911174_1 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000005698 85.0
SRD3_k127_3911174_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0001562 45.0
SRD3_k127_391767_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1091.0
SRD3_k127_391767_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008296 451.0
SRD3_k127_391767_2 cyclic nucleotide-binding K01420,K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 354.0
SRD3_k127_391767_3 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000001139 222.0
SRD3_k127_391767_4 Belongs to the carbohydrate kinase PfkB family - - - 0.000000000000005147 77.0
SRD3_k127_3918909_0 Heat shock 70 kDa protein K04043 - - 0.0 1066.0
SRD3_k127_3918909_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 9.125e-309 955.0
SRD3_k127_3918909_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007935 481.0
SRD3_k127_3918909_3 Two component transcriptional regulator, LytTR family K02477,K07705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 404.0
SRD3_k127_3918909_4 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000004113 132.0
SRD3_k127_3922700_0 4 iron, 4 sulfur cluster binding - - - 2.309e-214 674.0
SRD3_k127_3922700_1 carboxylic acid catabolic process K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 520.0
SRD3_k127_3922700_2 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007407 392.0
SRD3_k127_3922700_3 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 348.0
SRD3_k127_3922700_4 NlpC/P60 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004847 340.0
SRD3_k127_3922834_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 2.832e-248 773.0
SRD3_k127_3922834_1 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 330.0
SRD3_k127_3922834_2 - - - - 0.00000000000000000000000000000000000000001236 159.0
SRD3_k127_3922834_3 energy transducer activity K02487,K03832,K06596 - - 0.0000000003219 67.0
SRD3_k127_3922834_4 Asparaginase K13051 - 3.4.19.5 0.0006382 49.0
SRD3_k127_3936696_0 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.0 1218.0
SRD3_k127_3936696_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1017.0
SRD3_k127_3936696_10 TrkA-C domain K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 419.0
SRD3_k127_3936696_11 Major facilitator Superfamily K08152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 393.0
SRD3_k127_3936696_12 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 387.0
SRD3_k127_3936696_13 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000002185 243.0
SRD3_k127_3936696_14 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000002321 241.0
SRD3_k127_3936696_15 Gluconokinase K00851 - 2.7.1.12 0.0000000000000000000000000000000000000000000006451 172.0
SRD3_k127_3936696_16 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000001015 156.0
SRD3_k127_3936696_17 - - - - 0.000000000000000000000000000000000959 146.0
SRD3_k127_3936696_18 NACHT domain - - - 0.0000000000000000000000000000004266 138.0
SRD3_k127_3936696_19 histone H2A K63-linked ubiquitination - - - 0.00000001043 67.0
SRD3_k127_3936696_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K01810,K13810 - 2.2.1.2,5.3.1.9 7.316e-297 934.0
SRD3_k127_3936696_3 Glycogen debranching enzyme - - - 1.911e-243 769.0
SRD3_k127_3936696_4 amino acid K03294 - - 8.269e-240 750.0
SRD3_k127_3936696_5 Trehalase - - - 8.226e-238 755.0
SRD3_k127_3936696_6 Two component regulator propeller - - - 4.346e-219 698.0
SRD3_k127_3936696_7 amino acid K03294 - - 6.485e-219 690.0
SRD3_k127_3936696_8 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 527.0
SRD3_k127_3936696_9 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 449.0
SRD3_k127_3950529_0 Bacterial regulatory protein, Fis family K07713 - - 8.538e-209 657.0
SRD3_k127_3950529_1 Psort location Cytoplasmic, score 8.87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 528.0
SRD3_k127_3950529_2 Protein of unknown function (DUF1698) K15257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 407.0
SRD3_k127_3950529_3 Glycosyl hydrolase catalytic core - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 321.0
SRD3_k127_3950529_4 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004906 276.0
SRD3_k127_3950529_5 - - - - 0.00000000006444 65.0
SRD3_k127_3963282_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1342.0
SRD3_k127_3963282_1 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 617.0
SRD3_k127_3963282_10 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 365.0
SRD3_k127_3963282_11 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006901 340.0
SRD3_k127_3963282_12 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000313 272.0
SRD3_k127_3963282_13 - - - - 0.000000000000000000000000000000000000000000000000000006149 195.0
SRD3_k127_3963282_14 - - - - 0.0000000000000000000000000000000003237 132.0
SRD3_k127_3963282_15 Hemerythrin HHE cation binding domain protein K07216 - - 0.0000000000000000000000000000004136 130.0
SRD3_k127_3963282_16 collagen metabolic process - - - 0.000000000000002135 81.0
SRD3_k127_3963282_17 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000004782 63.0
SRD3_k127_3963282_18 Initiates the rapid degradation of small, acid-soluble proteins during spore germination - - - 0.00000000009533 64.0
SRD3_k127_3963282_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 471.0
SRD3_k127_3963282_3 Belongs to the PstS family K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 445.0
SRD3_k127_3963282_4 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000292 451.0
SRD3_k127_3963282_5 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 401.0
SRD3_k127_3963282_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044 385.0
SRD3_k127_3963282_7 Phosphate transport system permease protein PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 376.0
SRD3_k127_3963282_8 Transcriptional regulatory protein, C terminal K02483,K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 355.0
SRD3_k127_3963282_9 outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 369.0
SRD3_k127_3966702_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007319 340.0
SRD3_k127_3966702_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001765 256.0
SRD3_k127_3966702_2 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000005404 245.0
SRD3_k127_3966702_3 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000043 179.0
SRD3_k127_3966702_4 antisigma factor binding - - - 0.000000008821 64.0
SRD3_k127_3970908_0 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 3.463e-199 638.0
SRD3_k127_3970908_1 PFAM Pyridoxal-dependent decarboxylase K01593,K13745 - 4.1.1.105,4.1.1.28,4.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008379 542.0
SRD3_k127_3970908_2 GHMP kinases C terminal K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 417.0
SRD3_k127_3970908_3 amine dehydrogenase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000002976 271.0
SRD3_k127_3970908_4 NADH ubiquinone oxidoreductase, 20 Kd subunit K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000002136 176.0
SRD3_k127_3970908_5 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000003956 147.0
SRD3_k127_3970908_6 - - - - 0.000000000000000000000003385 104.0
SRD3_k127_3970908_7 photosystem II stabilization K02237 - - 0.0000000005132 65.0
SRD3_k127_3970908_8 Transcriptional regulatory protein, C terminal K07665 - - 0.0000718 50.0
SRD3_k127_3972769_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1033.0
SRD3_k127_3972769_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 5.653e-249 797.0
SRD3_k127_3972769_10 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000000007549 184.0
SRD3_k127_3972769_11 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000001566 196.0
SRD3_k127_3972769_12 - - - - 0.000000000000000000000000000000000000004177 153.0
SRD3_k127_3972769_13 IMP dehydrogenase activity - - - 0.000000000000000000000000000000000002444 141.0
SRD3_k127_3972769_14 Universal stress protein - - - 0.000000000000000000000000000000000004771 148.0
SRD3_k127_3972769_17 - - - - 0.00000000000005382 78.0
SRD3_k127_3972769_19 - - - - 0.00007865 48.0
SRD3_k127_3972769_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 8.838e-245 763.0
SRD3_k127_3972769_3 Ammonium Transporter K03320 - - 8.238e-225 705.0
SRD3_k127_3972769_4 FAD dependent oxidoreductase K00303,K21061 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 571.0
SRD3_k127_3972769_5 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 299.0
SRD3_k127_3972769_6 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 306.0
SRD3_k127_3972769_7 PFAM YdjC family protein K03478 - 3.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001886 286.0
SRD3_k127_3972769_8 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000001263 206.0
SRD3_k127_3972769_9 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000006569 186.0
SRD3_k127_3974750_0 Lactonase, 7-bladed beta-propeller - - - 4.783e-307 971.0
SRD3_k127_3974750_1 Protein kinase domain K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 477.0
SRD3_k127_3974750_2 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 326.0
SRD3_k127_3974750_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000081 259.0
SRD3_k127_3974750_4 Belongs to the uridine kinase family K00876 - 2.7.1.48 0.0000000000000000000000000000000000000000000000000000008242 199.0
SRD3_k127_3974750_5 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000121 203.0
SRD3_k127_3974750_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000742 106.0
SRD3_k127_3975292_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 434.0
SRD3_k127_3975292_1 3-demethylubiquinone-9 3-O-methyltransferase activity K16328 - 2.7.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002454 276.0
SRD3_k127_3975292_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007626 273.0
SRD3_k127_3975292_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000002862 271.0
SRD3_k127_3975292_4 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000001984 200.0
SRD3_k127_3975292_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000001156 152.0
SRD3_k127_3975292_6 Type ii and iii secretion system protein - - - 0.000000001455 62.0
SRD3_k127_3990707_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 6.159e-314 969.0
SRD3_k127_3990707_1 Carboxyl transferase domain - - - 9.719e-301 930.0
SRD3_k127_3990707_10 Peptidase, M20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 449.0
SRD3_k127_3990707_11 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 437.0
SRD3_k127_3990707_12 HMGL-like K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 402.0
SRD3_k127_3990707_13 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 362.0
SRD3_k127_3990707_14 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 332.0
SRD3_k127_3990707_15 Enoyl-CoA hydratase/isomerase K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 331.0
SRD3_k127_3990707_16 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 321.0
SRD3_k127_3990707_17 LssY C-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 321.0
SRD3_k127_3990707_18 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 312.0
SRD3_k127_3990707_19 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007881 291.0
SRD3_k127_3990707_2 Aromatic amino acid lyase K01745 - 4.3.1.3 1.206e-221 698.0
SRD3_k127_3990707_20 B12 binding domain K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000001252 238.0
SRD3_k127_3990707_21 sequence-specific DNA binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000005169 235.0
SRD3_k127_3990707_22 Flotillin K07192 - - 0.0000000000000000000000000000000000000000000000000000000000002901 214.0
SRD3_k127_3990707_23 ERAD pathway - - - 0.0000000000000000000000000000000000000000000000000000000003699 214.0
SRD3_k127_3990707_24 Membrane protein implicated in regulation of membrane protease activity - - - 0.0000000000000000000000000000000000000000000000000000000004136 209.0
SRD3_k127_3990707_25 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000000000008315 207.0
SRD3_k127_3990707_26 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000004651 206.0
SRD3_k127_3990707_27 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.0000000000000000000000000000000000000000000000000003774 195.0
SRD3_k127_3990707_28 BON domain - - - 0.00000000000000000000000000000000000000000000001659 185.0
SRD3_k127_3990707_29 Enoyl-CoA hydratase K01782,K01825 GO:0003674,GO:0003824,GO:0003857,GO:0004165,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008692,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 0.0000000000000000000000000000000000000000000005019 174.0
SRD3_k127_3990707_3 Amidohydrolase family - - - 6.261e-220 695.0
SRD3_k127_3990707_30 PFAM thioesterase superfamily K07107 - - 0.00000000000000000000000000000000000000000001764 173.0
SRD3_k127_3990707_32 Protein of unknown function (DUF3467) - - - 0.00000000000000000000000000000000005428 135.0
SRD3_k127_3990707_34 - - - - 0.000000000000000001065 90.0
SRD3_k127_3990707_35 - - - - 0.00000000007459 71.0
SRD3_k127_3990707_4 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 7.176e-208 651.0
SRD3_k127_3990707_5 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 584.0
SRD3_k127_3990707_6 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006468 548.0
SRD3_k127_3990707_7 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000477 513.0
SRD3_k127_3990707_8 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 486.0
SRD3_k127_3990707_9 Peptidase family M50 K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 467.0
SRD3_k127_4026173_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 424.0
SRD3_k127_4026173_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001354 270.0
SRD3_k127_4026173_2 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000002273 194.0
SRD3_k127_4035355_0 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 336.0
SRD3_k127_4035355_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 323.0
SRD3_k127_4035355_2 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007798 321.0
SRD3_k127_4035355_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000176 266.0
SRD3_k127_4035355_4 Dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001977 267.0
SRD3_k127_4035355_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006264 256.0
SRD3_k127_4035355_6 domain, Protein K02450,K07126,K15539 - - 0.0000000000000000001869 102.0
SRD3_k127_4048903_0 Transposase K07484 - - 7.489e-233 728.0
SRD3_k127_4048903_1 PFAM IS66 Orf2 family protein K07484 - - 0.00000000000000000000000000000000000000000000000000005313 188.0
SRD3_k127_4050514_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1161.0
SRD3_k127_4050514_1 Dehydrogenase E1 component K11381 - 1.2.4.4 0.0 1117.0
SRD3_k127_4050514_10 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0000000000000000005728 86.0
SRD3_k127_4050514_11 protein secretion K03116 GO:0008150,GO:0040007 - 0.0000000000002958 74.0
SRD3_k127_4050514_12 RibD C-terminal domain - - - 0.0000000000005062 70.0
SRD3_k127_4050514_13 ATP-grasp domain - - - 0.0000868 53.0
SRD3_k127_4050514_2 Carboxyl transferase domain K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 2.016e-246 771.0
SRD3_k127_4050514_3 glutamine synthetase K01915 - 6.3.1.2 5.832e-224 707.0
SRD3_k127_4050514_4 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 327.0
SRD3_k127_4050514_5 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 296.0
SRD3_k127_4050514_6 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 290.0
SRD3_k127_4050514_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009087 256.0
SRD3_k127_4050514_8 - - - - 0.000000000000000000000000000000000000000000000000000000001391 211.0
SRD3_k127_4050514_9 Biotin-requiring enzyme K17490 - 2.1.3.1 0.000000000000000000000002836 106.0
SRD3_k127_4065136_0 Sortilin, neurotensin receptor 3, - - - 0.0 1379.0
SRD3_k127_4065136_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007424 405.0
SRD3_k127_4065136_2 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 355.0
SRD3_k127_4065136_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 341.0
SRD3_k127_4072847_0 Carboxypeptidase regulatory-like domain - - - 5e-324 1028.0
SRD3_k127_4072847_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07306 - 1.8.5.3 9.648e-221 696.0
SRD3_k127_4072847_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000005829 177.0
SRD3_k127_4072847_3 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.000002064 51.0
SRD3_k127_409105_0 PFAM Response regulator receiver domain K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 358.0
SRD3_k127_409105_1 Phosphoesterase family K01114 - 3.1.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 344.0
SRD3_k127_409105_10 GGDEF domain - - - 0.00000000003953 72.0
SRD3_k127_409105_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 323.0
SRD3_k127_409105_3 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 319.0
SRD3_k127_409105_4 phospholipase C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001587 278.0
SRD3_k127_409105_5 CAAX protease self-immunity - - - 0.000000000000000000000000000000000000000000000000000000000000000000002138 250.0
SRD3_k127_409105_6 RNA polymerase sigma factor - - - 0.000000000000000000000000000000000000000000000000000000000000000788 226.0
SRD3_k127_409105_7 PFAM 6-pyruvoyl tetrahydropterin K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000002459 191.0
SRD3_k127_409105_8 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000002067 147.0
SRD3_k127_409105_9 - - - - 0.00000000000000000001501 97.0
SRD3_k127_4098294_0 metalloendopeptidase activity K01283 - 3.4.15.1 7.217e-257 809.0
SRD3_k127_4098294_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 4.433e-224 701.0
SRD3_k127_4098294_10 HELICc2 K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007502 347.0
SRD3_k127_4098294_11 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 310.0
SRD3_k127_4098294_12 Protein of unknown function (DUF3494) - - - 0.0000000000000000000000000001789 133.0
SRD3_k127_4098294_2 TIGRFAM ornithine aminotransferase K00819 - 2.6.1.13 1.784e-218 683.0
SRD3_k127_4098294_3 PFAM peptidase M28 - - - 5.884e-210 666.0
SRD3_k127_4098294_4 cyclic 2,3-diphosphoglycerate synthetase activity - - - 1.192e-206 653.0
SRD3_k127_4098294_5 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 5.899e-200 633.0
SRD3_k127_4098294_6 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 492.0
SRD3_k127_4098294_7 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 488.0
SRD3_k127_4098294_8 Amino acid kinase family K00926 - 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 445.0
SRD3_k127_4098294_9 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 438.0
SRD3_k127_4104658_0 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000000000000000000000000000001806 221.0
SRD3_k127_4104658_1 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000007284 154.0
SRD3_k127_4104658_2 Protein of unknown function (DUF1569) - - - 0.0000000000000000000000000000000000005882 141.0
SRD3_k127_4104658_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000004738 89.0
SRD3_k127_4115373_0 Molybdopterin oxidoreductase Fe4S4 domain K02567 - - 0.0 1168.0
SRD3_k127_4115373_1 - - - - 8.927e-295 929.0
SRD3_k127_4115373_2 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 559.0
SRD3_k127_4115373_3 PFAM Metallophosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 324.0
SRD3_k127_4115373_4 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002154 267.0
SRD3_k127_4115373_5 cytochrome c nitrite reductase K15876 - - 0.000000000000000000000000000000000000000000000000003018 186.0
SRD3_k127_4115373_6 CoA binding domain - - - 0.00000000000000000000000000000000000000000000001938 175.0
SRD3_k127_4115373_8 Cytochrome c7 and related cytochrome c - - - 0.000000002229 65.0
SRD3_k127_4115373_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000002257 59.0
SRD3_k127_4117154_0 Tetratricopeptide repeat - - - 1.245e-259 816.0
SRD3_k127_4117154_1 DNA ligase D, 3'-phosphoesterase domain K01971 - 6.5.1.1 9.153e-247 777.0
SRD3_k127_4117154_10 - - - - 0.0000225 54.0
SRD3_k127_4117154_11 phosphorelay signal transduction system - - - 0.00003602 48.0
SRD3_k127_4117154_2 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007214 511.0
SRD3_k127_4117154_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 470.0
SRD3_k127_4117154_4 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006995 438.0
SRD3_k127_4117154_5 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009721 380.0
SRD3_k127_4117154_6 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002769 257.0
SRD3_k127_4117154_7 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000004932 238.0
SRD3_k127_4117154_8 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000000001056 133.0
SRD3_k127_4117154_9 Regulatory protein, FmdB - - - 0.000000000000000000000009275 103.0
SRD3_k127_4119352_0 lipopolysaccharide transport K22110 - - 0.0 1417.0
SRD3_k127_4119352_1 choline dehydrogenase activity - - - 4.196e-271 842.0
SRD3_k127_4119352_10 Aldo/keto reductase family - - - 0.0000000203 56.0
SRD3_k127_4119352_11 SnoaL-like domain - - - 0.0000001074 63.0
SRD3_k127_4119352_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 311.0
SRD3_k127_4119352_3 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005184 287.0
SRD3_k127_4119352_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000006505 210.0
SRD3_k127_4119352_5 - - - - 0.000000000000000000000000000000000000000000000000003658 192.0
SRD3_k127_4119352_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000003938 177.0
SRD3_k127_4119352_7 Alpha amylase, catalytic domain - - - 0.0000000000000000000005282 108.0
SRD3_k127_4119352_8 Electron transfer DM13 - - - 0.00000000000000000003894 100.0
SRD3_k127_4119352_9 Putative zinc-finger - - - 0.00000000000001701 77.0
SRD3_k127_4123151_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 548.0
SRD3_k127_4123151_1 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000008327 245.0
SRD3_k127_4123151_2 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000007854 213.0
SRD3_k127_4126924_0 aconitate hydratase K01681 - 4.2.1.3 2.129e-298 927.0
SRD3_k127_4126924_1 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 583.0
SRD3_k127_4126924_10 response regulator, receiver - - - 0.0000000000000000000004226 100.0
SRD3_k127_4126924_12 von Willebrand factor, type A - - - 0.0000001252 63.0
SRD3_k127_4126924_2 PFAM isocitrate isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004262 578.0
SRD3_k127_4126924_3 Belongs to the peptidase M48B family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 547.0
SRD3_k127_4126924_4 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 526.0
SRD3_k127_4126924_5 Glutamate-ammonia ligase adenylyltransferase K00982 - 2.7.7.42,2.7.7.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 490.0
SRD3_k127_4126924_6 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 302.0
SRD3_k127_4126924_7 PFAM Aminotransferase, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009775 299.0
SRD3_k127_4126924_8 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000003914 224.0
SRD3_k127_4126924_9 chitin binding - - - 0.00000000000000000000000000000000000000000000000000000000008688 220.0
SRD3_k127_4132033_0 Elongation factor SelB, winged helix K03833 - - 2.39e-237 751.0
SRD3_k127_4132033_1 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 609.0
SRD3_k127_4132033_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 499.0
SRD3_k127_4132033_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008082 485.0
SRD3_k127_4132033_4 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000006027 235.0
SRD3_k127_4132033_5 RecX family K03565 - - 0.00000000000000000000000000000000000000000000000001572 184.0
SRD3_k127_4153044_0 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004486 429.0
SRD3_k127_4153044_1 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003954 261.0
SRD3_k127_4153044_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000002721 257.0
SRD3_k127_4153044_3 Bacterial protein of unknown function (DUF885) - - - 0.00000000000005654 72.0
SRD3_k127_4154568_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1066.0
SRD3_k127_4177481_0 Phosphate acyltransferases K00655,K01897 - 2.3.1.51,6.2.1.3 2.186e-318 1000.0
SRD3_k127_4177481_1 ATP dependent DNA ligase C terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 483.0
SRD3_k127_4177481_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 473.0
SRD3_k127_4177481_3 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001057 278.0
SRD3_k127_4177481_4 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000001454 207.0
SRD3_k127_4177481_5 cellular response to DNA damage stimulus - GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.0000000000000000000000000000000000000000001877 166.0
SRD3_k127_4188876_0 AsmA family K07289 - - 3.75e-201 655.0
SRD3_k127_4188876_1 aminoacyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001366 283.0
SRD3_k127_4188876_2 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000002745 220.0
SRD3_k127_4188876_4 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000007848 86.0
SRD3_k127_4199545_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 5.775e-210 662.0
SRD3_k127_4199545_1 Periplasmic binding protein domain K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 372.0
SRD3_k127_4199545_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 315.0
SRD3_k127_4199545_3 ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 308.0
SRD3_k127_4199545_4 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 286.0
SRD3_k127_4199545_5 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 287.0
SRD3_k127_4199545_6 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001371 264.0
SRD3_k127_4199545_7 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003873 247.0
SRD3_k127_4199545_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000111 243.0
SRD3_k127_4199545_9 Lysophospholipase L1 and related esterases - GO:0006629,GO:0008150,GO:0008152,GO:0009056,GO:0016042,GO:0044238,GO:0071704,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000005964 238.0
SRD3_k127_4212853_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 340.0
SRD3_k127_4212853_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000001502 73.0
SRD3_k127_4213120_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 3.863e-285 887.0
SRD3_k127_4213120_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 399.0
SRD3_k127_4213120_2 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 336.0
SRD3_k127_4213120_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009149 314.0
SRD3_k127_4213120_4 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000003245 242.0
SRD3_k127_4213120_5 - - - - 0.000000000000000000000000000000000000000001496 161.0
SRD3_k127_4213120_6 DinB family - - - 0.000001727 58.0
SRD3_k127_4213120_7 SnoaL-like domain - - - 0.00006038 51.0
SRD3_k127_4237944_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 582.0
SRD3_k127_4237944_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 377.0
SRD3_k127_4237944_2 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 344.0
SRD3_k127_4237944_3 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 305.0
SRD3_k127_4237944_4 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 281.0
SRD3_k127_4237944_5 Acylphosphatase K01512 - 3.6.1.7 0.0000000000000000000000000000003381 126.0
SRD3_k127_4237944_7 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000002548 62.0
SRD3_k127_4239900_0 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 4.12e-295 927.0
SRD3_k127_4239900_1 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 6.874e-270 852.0
SRD3_k127_4239900_10 Berberine and berberine like - - - 0.000000000000000000000000000000000000000000000000000000000003589 229.0
SRD3_k127_4239900_11 Methionine synthase B12-binding module cap domain protein K00548,K14084 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000005006 196.0
SRD3_k127_4239900_12 Iodothyronine deiodinase - - - 0.000000000000000000000000000000000004841 140.0
SRD3_k127_4239900_13 - - - - 0.000000000000000000000000000875 115.0
SRD3_k127_4239900_14 - - - - 0.000000000128 69.0
SRD3_k127_4239900_15 viral genome integration into host DNA - - - 0.0002231 46.0
SRD3_k127_4239900_2 Glycogen debranching enzyme - - - 3.159e-224 719.0
SRD3_k127_4239900_3 Aminotransferase class-III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 499.0
SRD3_k127_4239900_4 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000961 464.0
SRD3_k127_4239900_5 beta-1,4-mannooligosaccharide phosphorylase K21065 - 3.2.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000038 454.0
SRD3_k127_4239900_6 amino acid K03294,K13868 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 368.0
SRD3_k127_4239900_7 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 366.0
SRD3_k127_4239900_8 Coenzyme A transferase K01028 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006704 340.0
SRD3_k127_4239900_9 Protein of unknown function (DUF4256) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 319.0
SRD3_k127_4240119_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 610.0
SRD3_k127_4255321_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 9.399e-282 888.0
SRD3_k127_4255321_1 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 2.702e-245 766.0
SRD3_k127_4255321_10 chaperone-mediated protein folding - - - 0.00000000000000000000000000006097 118.0
SRD3_k127_4255321_11 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.0000000000000001655 79.0
SRD3_k127_4255321_13 - - - - 0.0000000004215 68.0
SRD3_k127_4255321_2 von Willebrand factor (vWF) type A domain K07114 - - 3.439e-216 676.0
SRD3_k127_4255321_4 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005362 278.0
SRD3_k127_4255321_5 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000001376 226.0
SRD3_k127_4255321_6 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000009094 190.0
SRD3_k127_4255321_7 Acid phosphatase homologues - - - 0.00000000000000000000000000000000000000000000000002875 190.0
SRD3_k127_4255321_8 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.0000000000000000000000000000000000000000000001891 175.0
SRD3_k127_4255321_9 Domain of unknown function (DUF892) - - - 0.0000000000000000000000000000000000000000000008336 172.0
SRD3_k127_4258851_0 dead deah K03724 - - 0.0 1195.0
SRD3_k127_4258851_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 510.0
SRD3_k127_4258851_10 Conserved hypothetical protein 95 - - - 0.00000000000000000000000000000000004542 139.0
SRD3_k127_4258851_11 - - - - 0.0000000000000000000000000000000003655 142.0
SRD3_k127_4258851_12 Cupin 2, conserved barrel domain protein K18991 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006089,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009438,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019172,GO:0019243,GO:0019249,GO:0019752,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046185,GO:0046394,GO:0051596,GO:0061727,GO:0071704,GO:0072330,GO:1901575,GO:1901576,GO:1901615,GO:1901617 - 0.0000000000000000000787 99.0
SRD3_k127_4258851_13 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000000000001698 87.0
SRD3_k127_4258851_14 Cupin 2, conserved barrel domain protein K18991 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006089,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009438,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019172,GO:0019243,GO:0019249,GO:0019752,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046185,GO:0046394,GO:0051596,GO:0061727,GO:0071704,GO:0072330,GO:1901575,GO:1901576,GO:1901615,GO:1901617 - 0.00000000000000001289 89.0
SRD3_k127_4258851_15 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000006313 75.0
SRD3_k127_4258851_17 - - - - 0.0000002657 57.0
SRD3_k127_4258851_18 Transposase IS116/IS110/IS902 family - - - 0.0001454 46.0
SRD3_k127_4258851_2 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005833 435.0
SRD3_k127_4258851_3 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 391.0
SRD3_k127_4258851_4 Copper binding proteins, plastocyanin/azurin family K00368 - 1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 380.0
SRD3_k127_4258851_5 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 348.0
SRD3_k127_4258851_6 Oxidoreductase NAD-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 295.0
SRD3_k127_4258851_7 Adenosine specific kinase K09129 - - 0.0000000000000000000000000000000000000000000000000000000000000258 221.0
SRD3_k127_4258851_8 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000001097 171.0
SRD3_k127_4258851_9 response regulator - - - 0.00000000000000000000000000000000001599 146.0
SRD3_k127_4266637_0 ATP synthesis coupled electron transport K05568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 555.0
SRD3_k127_4266637_1 Na H antiporter K05566 - - 0.000000000000000000000000000000000000000000000000000000000000008411 229.0
SRD3_k127_4266637_2 OsmC-like protein K04063 - - 0.0000000000000000000000000000000000000000000000002118 180.0
SRD3_k127_4266637_3 Multisubunit Na H antiporter MnhC subunit K05567 - - 0.0000000000000000000000000000000000000001479 160.0
SRD3_k127_4266637_4 - - - - 0.0000000000000000000000000000000000000022 157.0
SRD3_k127_4266637_5 ketosteroid isomerase - - - 0.0000000000000107 79.0
SRD3_k127_4266637_6 Domain of unknown function (DUF4040) - - - 0.0000000000007462 70.0
SRD3_k127_4284856_0 Transposase K07484 - - 2.462e-227 713.0
SRD3_k127_4284856_1 PFAM IS66 Orf2 family protein K07484 - - 0.00000000000000000000000000000000000000000000000263 181.0
SRD3_k127_4284856_2 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000464 112.0
SRD3_k127_4359704_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895,K01908 GO:0003674,GO:0003824,GO:0003987,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0017144,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046950,GO:0046951,GO:0050218,GO:0070013,GO:0071704,GO:1901568,GO:1901570,GO:1901576,GO:1902224 6.2.1.1,6.2.1.17 3.798e-297 923.0
SRD3_k127_4359704_1 MreB/Mbl protein - - - 1.322e-225 714.0
SRD3_k127_4359704_10 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000005285 188.0
SRD3_k127_4359704_11 PFAM Ubiquitin-conjugating - - - 0.000000000000000000000000000000000000001905 160.0
SRD3_k127_4359704_12 Domain of unknown function (DUF4339) - - - 0.000000000000000000000000000000000000003217 158.0
SRD3_k127_4359704_13 Domain of unknown function (DUF2760) - - - 0.000000000000000000000000000000000001182 151.0
SRD3_k127_4359704_14 domain, Protein - - - 0.000000000000000000000000000000000001805 160.0
SRD3_k127_4359704_15 proteolysis - - - 0.000000000000000000000000000000003011 142.0
SRD3_k127_4359704_16 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000000000001996 140.0
SRD3_k127_4359704_17 WXG100 protein secretion system (Wss), protein YukD - - - 0.0000000000000000000000000000009749 123.0
SRD3_k127_4359704_18 FeS assembly protein IscX - - - 0.000000000000000000000000007894 110.0
SRD3_k127_4359704_19 Adenylate cyclase - - - 0.0000000000000000000000003779 123.0
SRD3_k127_4359704_2 Belongs to the heat shock protein 70 family - - - 1.901e-224 727.0
SRD3_k127_4359704_20 - - - - 0.000000000000000000000003377 107.0
SRD3_k127_4359704_21 cellulase activity - - - 0.0000000000000000000003387 113.0
SRD3_k127_4359704_22 Protein of unknown function (DUF2934) - - - 0.0000000000000000000005124 101.0
SRD3_k127_4359704_23 DNA-templated transcription, termination K02600,K02945 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000371 83.0
SRD3_k127_4359704_24 Trypsin domain PDZ domain protein - - - 0.00000000000008594 83.0
SRD3_k127_4359704_25 TM2 domain protein - - - 0.0000000000006201 78.0
SRD3_k127_4359704_26 - - - - 0.000000000001239 75.0
SRD3_k127_4359704_27 Putative Ig domain - - - 0.000000008243 69.0
SRD3_k127_4359704_28 - - - - 0.0000006943 58.0
SRD3_k127_4359704_29 Prokaryotic RING finger family 1 - - - 0.000005188 57.0
SRD3_k127_4359704_3 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009143 542.0
SRD3_k127_4359704_4 Glutamine--fructose-6-phosphate aminotransferase isomerizing K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009234 443.0
SRD3_k127_4359704_5 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 393.0
SRD3_k127_4359704_6 Involved in molybdopterin and thiamine biosynthesis, family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 383.0
SRD3_k127_4359704_7 PFAM Uncharacterised BCR, COG1649 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006728 332.0
SRD3_k127_4359704_8 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000001124 240.0
SRD3_k127_4359704_9 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.000000000000000000000000000000000000000000000000000000002598 211.0
SRD3_k127_438127_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1587.0
SRD3_k127_438127_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005796 424.0
SRD3_k127_438127_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000008394 166.0
SRD3_k127_438127_3 LysM domain K08307,K12204 - - 0.00000000000000000000000000000000008895 142.0
SRD3_k127_438127_4 Outer membrane efflux protein - - - 0.00000000000000000000001172 108.0
SRD3_k127_438127_5 - - - - 0.00000000001248 69.0
SRD3_k127_438127_6 Transcriptional regulator, DeoR family K21601 - - 0.0000214 53.0
SRD3_k127_439126_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.481e-270 852.0
SRD3_k127_439126_1 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 5.302e-232 729.0
SRD3_k127_439126_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 333.0
SRD3_k127_439126_3 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004886 276.0
SRD3_k127_439126_4 AAA domain K00860 - 2.7.1.25 0.000000000000000000000000000000000000000009632 163.0
SRD3_k127_439126_5 AAA ATPase K07478 - - 0.0000000000000000000000000001517 115.0
SRD3_k127_439126_6 Protein of unknown function (DUF1440) - - - 0.0000000000000000000000003441 114.0
SRD3_k127_439126_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.00000000000000000000001446 110.0
SRD3_k127_4435080_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 573.0
SRD3_k127_4435080_1 endonuclease activity - - - 0.00000000000000000000002831 106.0
SRD3_k127_4435080_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000004093 72.0
SRD3_k127_4496410_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 1.936e-259 820.0
SRD3_k127_4496410_1 PFAM 2Fe-2S -binding K03518,K07302,K13483 - 1.2.5.3,1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000002455 220.0
SRD3_k127_4496410_2 TonB-dependent Receptor Plug - - - 0.000000000000000000000002993 104.0
SRD3_k127_4540662_0 Aminotransferase class-III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 601.0
SRD3_k127_4540662_1 PFAM Cytochrome c assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 565.0
SRD3_k127_4540662_10 - - - - 0.0004873 46.0
SRD3_k127_4540662_2 FAE1/Type III polyketide synthase-like protein K16167 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002916 428.0
SRD3_k127_4540662_3 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 329.0
SRD3_k127_4540662_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 301.0
SRD3_k127_4540662_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000008801 199.0
SRD3_k127_4540662_6 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000005944 193.0
SRD3_k127_4540662_7 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000005717 156.0
SRD3_k127_4540662_8 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000002202 138.0
SRD3_k127_4540662_9 membrane - - - 0.000008394 56.0
SRD3_k127_4692806_0 PFAM Magnesium chelatase, ChlI subunit K07391 - - 8.759e-260 810.0
SRD3_k127_4692806_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008729 573.0
SRD3_k127_4692806_2 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 458.0
SRD3_k127_4692806_3 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 320.0
SRD3_k127_4692806_4 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001345 272.0
SRD3_k127_4692806_5 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000000001085 266.0
SRD3_k127_4692806_6 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001805 256.0
SRD3_k127_4692806_7 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000000000000004717 235.0
SRD3_k127_4692806_8 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000829 177.0
SRD3_k127_4701387_0 Cephalosporin hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004798 341.0
SRD3_k127_4701387_1 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 303.0
SRD3_k127_4701387_2 Periplasmic or secreted lipoprotein - - - 0.000000000000000000000000000000000007227 146.0
SRD3_k127_4716915_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1073.0
SRD3_k127_4716915_1 PFAM Aminotransferase class-III K01845 - 5.4.3.8 1.98e-209 660.0
SRD3_k127_4716915_11 Glycosyl hydrolase-like 10 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003853 340.0
SRD3_k127_4716915_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 314.0
SRD3_k127_4716915_13 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008901 274.0
SRD3_k127_4716915_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009112 252.0
SRD3_k127_4716915_15 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003628 244.0
SRD3_k127_4716915_16 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000005807 236.0
SRD3_k127_4716915_17 - - - - 0.000000000000000000000000000000000000000000000000000001532 199.0
SRD3_k127_4716915_18 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000001247 189.0
SRD3_k127_4716915_19 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000000000000000001607 176.0
SRD3_k127_4716915_2 MviN-like protein K03980 - - 1.178e-201 642.0
SRD3_k127_4716915_20 Histidine kinase - - - 0.000000000000000000000000000000000000000000001693 171.0
SRD3_k127_4716915_21 Methyltransferase domain - - - 0.000000000000000000000000000001148 131.0
SRD3_k127_4716915_22 ArsC family K00537 - 1.20.4.1 0.0000000000000000000003014 99.0
SRD3_k127_4716915_23 viral genome integration into host DNA - - - 0.0000000000000005709 85.0
SRD3_k127_4716915_25 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000002494 65.0
SRD3_k127_4716915_26 Recombinase - - - 0.000002602 49.0
SRD3_k127_4716915_3 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004315 572.0
SRD3_k127_4716915_4 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 548.0
SRD3_k127_4716915_5 Belongs to the OprB family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 520.0
SRD3_k127_4716915_6 Zinc carboxypeptidase K14054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006067 483.0
SRD3_k127_4716915_7 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 408.0
SRD3_k127_4716915_8 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824 361.0
SRD3_k127_4716915_9 PFAM Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 352.0
SRD3_k127_4717800_0 Sigma-54 interaction domain K15836 - - 7.334e-198 637.0
SRD3_k127_4717800_1 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003416 253.0
SRD3_k127_4717800_2 Serine aminopeptidase, S33 - - - 0.0000000000000000000002322 106.0
SRD3_k127_4717800_3 Universal stress protein - - - 0.0000000000000007673 84.0
SRD3_k127_4724102_0 Carboxypeptidase regulatory-like domain - - - 2.97e-262 842.0
SRD3_k127_4724102_1 PFAM Formiminotransferase domain K00603,K13990 - 2.1.2.5,4.3.1.4 5.439e-224 703.0
SRD3_k127_4724102_10 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 GO:0000302,GO:0001101,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0016491,GO:0016667,GO:0016672,GO:0016675,GO:0019538,GO:0030091,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0043170,GO:0043546,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0048037,GO:0050662,GO:0050896,GO:0055114,GO:0071704,GO:0097159,GO:1901363,GO:1901530,GO:1901564,GO:1901700 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 435.0
SRD3_k127_4724102_11 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 424.0
SRD3_k127_4724102_12 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 414.0
SRD3_k127_4724102_13 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 364.0
SRD3_k127_4724102_14 Sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 359.0
SRD3_k127_4724102_16 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006181 360.0
SRD3_k127_4724102_17 Participates in transcription elongation, termination and antitermination - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595 325.0
SRD3_k127_4724102_18 Domain of unknown function (DUF1972) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 325.0
SRD3_k127_4724102_19 PFAM Short-chain dehydrogenase reductase SDR K00059,K03793 - 1.1.1.100,1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000527 274.0
SRD3_k127_4724102_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 2.322e-208 660.0
SRD3_k127_4724102_20 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000002597 269.0
SRD3_k127_4724102_21 ABC transporter K09689,K09691 - 3.6.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000004364 254.0
SRD3_k127_4724102_22 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.000000000000000000000000000000000000000000000000000000000000000000001 242.0
SRD3_k127_4724102_23 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000007117 244.0
SRD3_k127_4724102_24 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001412 243.0
SRD3_k127_4724102_25 - - - - 0.000000000000000000000000000000000000000000000000000000000000211 220.0
SRD3_k127_4724102_26 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000003224 196.0
SRD3_k127_4724102_27 ABC-2 type transporter K01992,K09690 - - 0.000000000000000000000000000000000000000000000000001182 194.0
SRD3_k127_4724102_28 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000000001171 174.0
SRD3_k127_4724102_29 - - - - 0.0000000000000000000000000000000000000000000006076 171.0
SRD3_k127_4724102_3 Respiratory-chain NADH dehydrogenase, 49 Kd subunit K00333 - 1.6.5.3 8.545e-208 656.0
SRD3_k127_4724102_30 Hydrolases of the alpha beta superfamily K06889,K07397 - - 0.00000000000000000000000000000000000000000002998 164.0
SRD3_k127_4724102_31 Lipid A 3-O-deacylase (PagL) - - - 0.000000000000000000000000000000000000000001426 167.0
SRD3_k127_4724102_32 NADH dehydrogenase K00337 - 1.6.5.3 0.000000000000000000000000000000000000000003904 157.0
SRD3_k127_4724102_33 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000003314 109.0
SRD3_k127_4724102_35 cell redox homeostasis K03671 - - 0.000000000000000003947 87.0
SRD3_k127_4724102_37 oxidoreductase activity - - - 0.00002678 49.0
SRD3_k127_4724102_38 PFAM Radical SAM domain protein - - - 0.00004876 49.0
SRD3_k127_4724102_4 PFAM acyl-CoA dehydrogenase domain protein - - - 1.115e-206 652.0
SRD3_k127_4724102_5 Methyltransferase type 11 K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 544.0
SRD3_k127_4724102_6 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 501.0
SRD3_k127_4724102_7 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005887 494.0
SRD3_k127_4724102_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003304 490.0
SRD3_k127_4724102_9 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 475.0
SRD3_k127_473817_0 PFAM short chain dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 419.0
SRD3_k127_473817_1 Proprotein convertase P-domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000152 276.0
SRD3_k127_473817_2 PIN domain - - - 0.000000000000000000000001148 108.0
SRD3_k127_473817_3 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000000000000000002124 87.0
SRD3_k127_4739599_0 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.0 1206.0
SRD3_k127_4739599_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 8.151e-302 934.0
SRD3_k127_4739599_10 Pirin C-terminal cupin domain K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005589 557.0
SRD3_k127_4739599_11 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 - 4.4.1.1,4.4.1.2,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 549.0
SRD3_k127_4739599_12 Belongs to the peptidase M48B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 529.0
SRD3_k127_4739599_13 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 512.0
SRD3_k127_4739599_14 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 499.0
SRD3_k127_4739599_15 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000934 466.0
SRD3_k127_4739599_16 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 458.0
SRD3_k127_4739599_17 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008785 429.0
SRD3_k127_4739599_18 NnrS protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 432.0
SRD3_k127_4739599_19 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000502 416.0
SRD3_k127_4739599_2 PFAM Type II secretion system protein E K02652 - - 4.422e-272 846.0
SRD3_k127_4739599_20 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 374.0
SRD3_k127_4739599_21 Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 362.0
SRD3_k127_4739599_22 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009061 364.0
SRD3_k127_4739599_23 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 350.0
SRD3_k127_4739599_24 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 320.0
SRD3_k127_4739599_25 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008027 320.0
SRD3_k127_4739599_26 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 291.0
SRD3_k127_4739599_27 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005535 282.0
SRD3_k127_4739599_28 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003559 269.0
SRD3_k127_4739599_29 Domain of Unknown function (DUF542) K07322 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000141 265.0
SRD3_k127_4739599_3 PFAM TonB-dependent Receptor Plug - - - 6.272e-264 852.0
SRD3_k127_4739599_30 PAS PAC sensor signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001197 261.0
SRD3_k127_4739599_32 Domain of unknown function (DUF1858) - - - 0.0000000000000000000000000000000000000000000000000000000000000000006883 248.0
SRD3_k127_4739599_33 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000001802 228.0
SRD3_k127_4739599_34 Pilus assembly protein K02662 - - 0.00000000000000000000000000000000000000000000000000000000000005238 224.0
SRD3_k127_4739599_35 Gram-negative bacterial TonB protein C-terminal - - - 0.000000000000000000000000000000000000000000000000000000002358 216.0
SRD3_k127_4739599_36 Belongs to the HesB IscA family - - - 0.000000000000000000000000000000000000000000000000000158 187.0
SRD3_k127_4739599_37 - - - - 0.0000000000000000000000000000000000000000000000005643 186.0
SRD3_k127_4739599_38 acetyltransferase - - - 0.00000000000000000000000000000000000000000001029 174.0
SRD3_k127_4739599_39 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000000009238 135.0
SRD3_k127_4739599_4 PFAM Type II secretion system protein E K02652 - - 3.193e-255 797.0
SRD3_k127_4739599_40 Pilus assembly protein K02662 - - 0.0000000000000000000000000000000009996 138.0
SRD3_k127_4739599_41 - K02664 - - 0.000000000000000000000000000002864 127.0
SRD3_k127_4739599_42 CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000002965 116.0
SRD3_k127_4739599_43 - - - - 0.00000000000000000000000001161 117.0
SRD3_k127_4739599_44 Histidine kinase - - - 0.00000000000000000000008099 114.0
SRD3_k127_4739599_45 PFAM Septum formation initiator K05589 - - 0.00000000000000000005974 97.0
SRD3_k127_4739599_46 response regulator - - - 0.00000000000000005273 89.0
SRD3_k127_4739599_47 - - - - 0.00000000000000522 78.0
SRD3_k127_4739599_48 PFAM AhpC TSA family K03386 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0020012,GO:0030682,GO:0042221,GO:0043207,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0051920,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0070887,GO:0075136,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.00000000000007603 75.0
SRD3_k127_4739599_49 Redoxin K03386 - 1.11.1.15 0.0000000002519 65.0
SRD3_k127_4739599_5 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 1.636e-247 771.0
SRD3_k127_4739599_50 PFAM NHL repeat containing protein K13735 - - 0.00000003717 66.0
SRD3_k127_4739599_6 Amidohydrolase family - - - 7.244e-234 737.0
SRD3_k127_4739599_7 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 1.466e-225 713.0
SRD3_k127_4739599_8 AMP-binding enzyme K01897 - 6.2.1.3 3.039e-217 689.0
SRD3_k127_4739599_9 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III - - - 1.212e-216 680.0
SRD3_k127_4762305_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 523.0
SRD3_k127_4762305_1 Protein of unknown function (DUF3373) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004883 297.0
SRD3_k127_4762305_2 Cytochrome c K15862 - 1.9.3.1 0.000000000000000000000000000003537 122.0
SRD3_k127_4762305_4 Rhodanese Homology Domain K01011 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.8.1.1,2.8.1.2 0.0000000000000000000001397 97.0
SRD3_k127_4772546_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 3.743e-205 650.0
SRD3_k127_4772546_1 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 511.0
SRD3_k127_4772546_10 Haloacid dehalogenase domain protein hydrolase, type 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 302.0
SRD3_k127_4772546_11 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000372 259.0
SRD3_k127_4772546_12 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000004526 249.0
SRD3_k127_4772546_13 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001512 250.0
SRD3_k127_4772546_14 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000007054 237.0
SRD3_k127_4772546_15 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000321 222.0
SRD3_k127_4772546_16 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000002622 231.0
SRD3_k127_4772546_17 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000009537 231.0
SRD3_k127_4772546_18 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000000000001963 208.0
SRD3_k127_4772546_19 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000005886 202.0
SRD3_k127_4772546_2 Pyridine nucleotide-disulphide oxidoreductase K03885,K10716 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 519.0
SRD3_k127_4772546_20 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000000002974 207.0
SRD3_k127_4772546_21 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000005261 156.0
SRD3_k127_4772546_22 SCO1/SenC K07152 - - 0.00000000000000000000000000000000002003 143.0
SRD3_k127_4772546_23 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.000000000000000000000000000000008234 141.0
SRD3_k127_4772546_24 - - - - 0.000000000000000006693 93.0
SRD3_k127_4772546_25 Outer membrane lipoprotein - - - 0.000000000009766 72.0
SRD3_k127_4772546_26 Fibronectin type III domain - - - 0.00000004147 65.0
SRD3_k127_4772546_3 PFAM Xanthine uracil vitamin C permease K02824 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 475.0
SRD3_k127_4772546_4 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 434.0
SRD3_k127_4772546_5 PFAM short chain dehydrogenase K00034 - 1.1.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007271 361.0
SRD3_k127_4772546_6 GlcNAc-PI de-N-acetylase K01463 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 352.0
SRD3_k127_4772546_7 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 353.0
SRD3_k127_4772546_8 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009949 361.0
SRD3_k127_4772546_9 PFAM multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 342.0
SRD3_k127_4778342_0 - - - - 0.0000000000000000000000000000000000000000000000006269 187.0
SRD3_k127_4778342_1 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000000000000000000000000006808 130.0
SRD3_k127_4790603_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1132.0
SRD3_k127_4790603_1 Permease, YjgP YjgQ - - - 4.23e-287 903.0
SRD3_k127_4790603_10 protein (some members contain a von Willebrand factor type A (vWA) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 407.0
SRD3_k127_4790603_11 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008585 400.0
SRD3_k127_4790603_12 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007196 399.0
SRD3_k127_4790603_13 Glycosyl transferase family group 2 K00720 - 2.4.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 391.0
SRD3_k127_4790603_14 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 383.0
SRD3_k127_4790603_15 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007354 357.0
SRD3_k127_4790603_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 351.0
SRD3_k127_4790603_17 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 351.0
SRD3_k127_4790603_18 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 330.0
SRD3_k127_4790603_19 Membrane K06384 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 333.0
SRD3_k127_4790603_2 Glycosyl hydrolase family 57 - - - 6.897e-283 889.0
SRD3_k127_4790603_20 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000006673 268.0
SRD3_k127_4790603_21 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.0000000000000000000000000000000000000000000000000000000000000587 218.0
SRD3_k127_4790603_22 RDD family - - - 0.0000000000000000000000000000000000000000000000000000000002284 219.0
SRD3_k127_4790603_23 Cupin superfamily (DUF985) K09705 - - 0.00000000000000000000000000000000000000000000000000000003252 200.0
SRD3_k127_4790603_24 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000004393 198.0
SRD3_k127_4790603_25 Fusaric acid resistance protein family - - - 0.0000000000000000000000000000000000000000000004931 181.0
SRD3_k127_4790603_26 - - - - 0.000000000000000000000000000000000000002458 149.0
SRD3_k127_4790603_27 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000000006226 144.0
SRD3_k127_4790603_28 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.0000000000000000000000000000000000001583 158.0
SRD3_k127_4790603_29 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000001501 141.0
SRD3_k127_4790603_3 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.146e-215 677.0
SRD3_k127_4790603_30 antisigma factor binding K04749 - - 0.00000000000000000000000000000000206 134.0
SRD3_k127_4790603_31 DoxX - - - 0.000000000000000000000000000000006757 136.0
SRD3_k127_4790603_32 DinB superfamily - - - 0.000000000000000000000000004146 117.0
SRD3_k127_4790603_33 - - - - 0.00000000000000000000002702 107.0
SRD3_k127_4790603_34 lactoylglutathione lyase activity - - - 0.00000000000000001098 90.0
SRD3_k127_4790603_35 - - - - 0.000000000000001203 78.0
SRD3_k127_4790603_36 lactoylglutathione lyase activity - - - 0.000000000000003027 81.0
SRD3_k127_4790603_37 hemerythrin HHE cation binding domain - - - 0.00000000000001301 81.0
SRD3_k127_4790603_38 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000926 49.0
SRD3_k127_4790603_39 Redoxin - - - 0.0002758 45.0
SRD3_k127_4790603_4 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 1.285e-209 666.0
SRD3_k127_4790603_40 abc-type fe3 -hydroxamate transport system, periplasmic component K09973 - - 0.0004218 51.0
SRD3_k127_4790603_5 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 5.518e-209 656.0
SRD3_k127_4790603_6 Domain of unknown function (DUF3471) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 559.0
SRD3_k127_4790603_7 Protein of unknown function (DUF2891) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 486.0
SRD3_k127_4790603_8 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000577 476.0
SRD3_k127_4790603_9 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 471.0
SRD3_k127_4790796_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1298.0
SRD3_k127_4790796_1 AMP-binding enzyme C-terminal domain K08295 - 6.2.1.32 2.817e-220 696.0
SRD3_k127_4790796_10 PFAM NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 475.0
SRD3_k127_4790796_11 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 472.0
SRD3_k127_4790796_12 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 417.0
SRD3_k127_4790796_13 Enoyl-CoA hydratase/isomerase K01715,K07537 - 4.2.1.100,4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 396.0
SRD3_k127_4790796_14 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 397.0
SRD3_k127_4790796_15 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 356.0
SRD3_k127_4790796_16 Histidine-specific methyltransferase, SAM-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 321.0
SRD3_k127_4790796_17 synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 308.0
SRD3_k127_4790796_18 Member of the two-component regulatory system AtoS AtoC. In the presence of acetoacetate, AtoS AtoC stimulates the expression of the atoDAEB operon, leading to short chain fatty acid catabolism and activation of the poly-(R)-3-hydroxybutyrate (cPHB) biosynthetic pathway. Also induces the operon in response to spermidine. Involved in the regulation of motility and chemotaxis, via transcriptional induction of the flagellar regulon. AtoC acts by binding directly to the promoter region of the target genes. In addition to its role as a transcriptional regulator, functions as a post- translational regulator that inhibits polyamine biosynthesis via regulation of ornithine decarboxylase (ODC) K02481,K07714 GO:0003674,GO:0003700,GO:0004857,GO:0006355,GO:0008073,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010967,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033238,GO:0042979,GO:0043086,GO:0044092,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:0140110,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 314.0
SRD3_k127_4790796_19 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 299.0
SRD3_k127_4790796_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 589.0
SRD3_k127_4790796_20 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009281 263.0
SRD3_k127_4790796_21 cell redox homeostasis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001414 261.0
SRD3_k127_4790796_22 PFAM LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001294 248.0
SRD3_k127_4790796_23 MobA-Related Protein K07141,K19190 - 1.1.1.328,2.7.7.76 0.00000000000000000000000000000000000000000000000000000000000000001972 229.0
SRD3_k127_4790796_24 Domain present in phytochromes and cGMP-specific phosphodiesterases. K08968 - 1.8.4.14 0.00000000000000000000000000000000000000000000000000006194 193.0
SRD3_k127_4790796_25 NUDIX domain K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000002014 177.0
SRD3_k127_4790796_26 PAS sensor protein - - - 0.0000000000000000000000000000000000000000000002095 171.0
SRD3_k127_4790796_27 nucleotidyltransferase activity - - - 0.000000000000000000000000000000000000000000006515 175.0
SRD3_k127_4790796_28 TPM domain K06872 - - 0.000000000000000000000000000000000000000000009763 172.0
SRD3_k127_4790796_29 Peptidyl-prolyl cis-trans K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000007984 161.0
SRD3_k127_4790796_3 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 516.0
SRD3_k127_4790796_30 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000003875 166.0
SRD3_k127_4790796_31 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000000000000000007066 169.0
SRD3_k127_4790796_32 NMT1-like family K02051,K15553 - - 0.000000000000000000000000000000000000003848 158.0
SRD3_k127_4790796_33 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000002163 152.0
SRD3_k127_4790796_34 - - - - 0.0000000000000000000000000002339 123.0
SRD3_k127_4790796_35 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000043 116.0
SRD3_k127_4790796_36 Serine aminopeptidase, S33 - - - 0.00000000000000000007605 98.0
SRD3_k127_4790796_37 - - - - 0.000000000000000003633 89.0
SRD3_k127_4790796_38 extracellular solute-binding protein, family 5 K02035 - - 0.000000000003169 68.0
SRD3_k127_4790796_39 - - - - 0.000000000006079 70.0
SRD3_k127_4790796_4 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006801 513.0
SRD3_k127_4790796_5 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 513.0
SRD3_k127_4790796_6 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009483 492.0
SRD3_k127_4790796_7 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 486.0
SRD3_k127_4790796_8 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007856 490.0
SRD3_k127_4790796_9 PFAM Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 492.0
SRD3_k127_4797216_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 7.222e-201 641.0
SRD3_k127_4797216_1 Acyl-CoA dehydrogenase, C-terminal domain K00248,K09478 - 1.3.8.1,1.3.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 488.0
SRD3_k127_4797216_2 DNA replication, synthesis of RNA primer K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 390.0
SRD3_k127_4797216_3 Radical SAM superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 305.0
SRD3_k127_4797216_4 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003927 240.0
SRD3_k127_4797216_5 Uracil DNA glycosylase superfamily K03649 - 3.2.2.28 0.0000000000000000000000000000000000000000000000000000000000000003655 228.0
SRD3_k127_4797216_6 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000003528 190.0
SRD3_k127_4797216_7 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000000000009129 184.0
SRD3_k127_4797216_8 PFAM heat shock protein DnaJ K04082 - - 0.0000000000000000000000007995 106.0
SRD3_k127_4804060_0 Patatin-like phospholipase K07001 - - 2.045e-201 650.0
SRD3_k127_4804060_1 major pilin protein fima - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 384.0
SRD3_k127_4804060_2 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000002291 178.0
SRD3_k127_4804060_3 TonB-dependent Receptor Plug Domain - - - 0.0000000325 59.0
SRD3_k127_482219_0 Sodium Bile acid symporter family K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 552.0
SRD3_k127_482219_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 406.0
SRD3_k127_482219_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 317.0
SRD3_k127_482219_3 Phosphoribosyl transferase domain K07100 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002875 270.0
SRD3_k127_482219_4 4Fe-4S dicluster domain K07307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000153 250.0
SRD3_k127_482219_5 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07306 - 1.8.5.3 0.000000000000000000000000000000000005012 137.0
SRD3_k127_482219_6 Dienelactone hydrolase K07100 - - 0.000000000000000000000000000006397 120.0
SRD3_k127_482219_7 DMSO reductase anchor subunit (DmsC) K07308 - - 0.00000000000000000000000000002403 128.0
SRD3_k127_4824781_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0 1110.0
SRD3_k127_4824781_1 amino acid K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 565.0
SRD3_k127_4824781_2 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 487.0
SRD3_k127_4824781_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000000000000000000000000000000000007382 174.0
SRD3_k127_4824781_4 PFAM YdjC family protein K03478 - 3.5.1.105 0.0000000000000009257 81.0
SRD3_k127_4824781_6 Tetratricopeptide repeat - - - 0.00002203 57.0
SRD3_k127_4827732_0 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 569.0
SRD3_k127_4827732_1 Semialdehyde dehydrogenase K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004681 406.0
SRD3_k127_4827732_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 341.0
SRD3_k127_4827732_3 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001593 274.0
SRD3_k127_4827732_4 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.0000000000000000000000000000000000000000000000000000000000000004806 228.0
SRD3_k127_4827732_5 Lipopolysaccharide-assembly - - - 0.00000000000000000000000000000000000000000000000000369 188.0
SRD3_k127_4827732_7 Tetratricopeptide repeat - - - 0.0000003315 56.0
SRD3_k127_48600_0 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 1.38e-257 812.0
SRD3_k127_48600_1 PFAM RNA-binding protein AU-1 Ribonuclease E G K08301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 505.0
SRD3_k127_48600_2 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 466.0
SRD3_k127_48600_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008676 467.0
SRD3_k127_48600_4 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000002953 214.0
SRD3_k127_48600_5 response regulator, receiver - - - 0.00000000000000000000000003736 110.0
SRD3_k127_4867864_0 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.0 1126.0
SRD3_k127_4867864_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 9.133e-263 820.0
SRD3_k127_4867864_10 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000007134 219.0
SRD3_k127_4867864_11 - - - - 0.0000000000000000000000000000000000000000000000000004185 192.0
SRD3_k127_4867864_12 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000866 146.0
SRD3_k127_4867864_13 Reverse transcriptase-like K03469,K06864 - 3.1.26.4 0.000000000000000000001979 99.0
SRD3_k127_4867864_14 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.0000000000000000002721 91.0
SRD3_k127_4867864_2 COG3209 Rhs family protein - - - 7.395e-261 822.0
SRD3_k127_4867864_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.075e-236 739.0
SRD3_k127_4867864_4 dead deah K03724 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 548.0
SRD3_k127_4867864_5 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 546.0
SRD3_k127_4867864_6 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 488.0
SRD3_k127_4867864_7 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006487 417.0
SRD3_k127_4867864_8 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 298.0
SRD3_k127_4867864_9 TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005781 271.0
SRD3_k127_4869763_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.813e-238 747.0
SRD3_k127_4869763_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 2.323e-226 716.0
SRD3_k127_4869763_2 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 529.0
SRD3_k127_4869763_3 cellular response to DNA damage stimulus - GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.00000000000000000000000000000000002344 143.0
SRD3_k127_4869763_5 Rubrerythrin - - - 0.000000006939 58.0
SRD3_k127_4882875_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1471.0
SRD3_k127_4882875_1 Sortilin, neurotensin receptor 3, - - - 0.0 1339.0
SRD3_k127_4882875_10 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 357.0
SRD3_k127_4882875_11 Belongs to the SUA5 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 296.0
SRD3_k127_4882875_12 - - - - 0.00000000000000000000000000000000000000000000000000000000001087 221.0
SRD3_k127_4882875_13 DinB family - - - 0.00000000000000000000000000000000000000000000005325 175.0
SRD3_k127_4882875_14 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000006303 177.0
SRD3_k127_4882875_15 - - - - 0.000000000000000000000000002181 124.0
SRD3_k127_4882875_16 - - - - 0.000000000000000000000002771 110.0
SRD3_k127_4882875_18 Regulatory protein, FmdB family - - - 0.000000000007843 67.0
SRD3_k127_4882875_2 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1008.0
SRD3_k127_4882875_3 PFAM Amidase - - - 4.06e-215 684.0
SRD3_k127_4882875_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008645 514.0
SRD3_k127_4882875_5 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006225 508.0
SRD3_k127_4882875_6 peptidase S1 and S6 chymotrypsin Hap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 486.0
SRD3_k127_4882875_7 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 491.0
SRD3_k127_4882875_8 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000423 400.0
SRD3_k127_4882875_9 Serine aminopeptidase, S33 K07019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 362.0
SRD3_k127_4915069_0 Dipeptidyl carboxypeptidase K01284 - 3.4.15.5 2.828e-301 939.0
SRD3_k127_4915069_1 PFAM NADH-ubiquinone oxidoreductase, chain 49kDa K00333,K12142,K15830 GO:0003674,GO:0005488,GO:0016151,GO:0043167,GO:0043169,GO:0046872,GO:0046914 1.6.5.3 1.064e-273 850.0
SRD3_k127_4915069_10 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 395.0
SRD3_k127_4915069_11 Coenzyme A transferase K01028 - 2.8.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 350.0
SRD3_k127_4915069_12 Belongs to the complex I 20 kDa subunit family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 293.0
SRD3_k127_4915069_13 -O-antigen K02847,K13009,K16705 GO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0019538,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000582 278.0
SRD3_k127_4915069_14 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K12143,K15831 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002077 259.0
SRD3_k127_4915069_15 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008912 250.0
SRD3_k127_4915069_16 PEGA domain - - - 0.00000000000000000000000000000000000000000000000000000000001218 214.0
SRD3_k127_4915069_17 SelR domain K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000008055 201.0
SRD3_k127_4915069_18 Membrane dipeptidase (Peptidase family M19) - - - 0.000000000000000000000000000000000000000000000003514 188.0
SRD3_k127_4915069_19 Domain of unknown function (DUF1858) - - - 0.0000000000000000000000000000000000000000001534 174.0
SRD3_k127_4915069_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00336 - 1.6.5.3 3.24e-252 796.0
SRD3_k127_4915069_20 Belongs to the glycosyl hydrolase 31 family K01187,K01811 - 3.2.1.177,3.2.1.20 0.00000000000000000000000000000000000000001928 162.0
SRD3_k127_4915069_21 spore germination K00442,K08315 - 3.4.23.51 0.000000000000000000000000000000000000007209 151.0
SRD3_k127_4915069_22 LssY C-terminus - - - 0.00000000000000000000000000000000001912 149.0
SRD3_k127_4915069_23 - - - - 0.00000000000000000000000000000199 129.0
SRD3_k127_4915069_24 Belongs to the ompA family K03286 - - 0.000000000000000000000000114 108.0
SRD3_k127_4915069_25 dihydrofolate reductase activity - - - 0.00000000000000003649 82.0
SRD3_k127_4915069_26 Belongs to the ompA family - - - 0.0000000000004556 71.0
SRD3_k127_4915069_27 - - - - 0.0000000000007065 83.0
SRD3_k127_4915069_28 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000008855 67.0
SRD3_k127_4915069_29 Belongs to the glycosyl hydrolase 31 family K01187,K01811 - 3.2.1.177,3.2.1.20 0.000000007035 57.0
SRD3_k127_4915069_3 Belongs to the glycosyl hydrolase 31 family K01187,K01811 - 3.2.1.177,3.2.1.20 1.397e-227 713.0
SRD3_k127_4915069_30 - - - - 0.000002841 56.0
SRD3_k127_4915069_4 PFAM NADH Ubiquinone plastoquinone (complex I) - - - 8.012e-203 654.0
SRD3_k127_4915069_5 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 524.0
SRD3_k127_4915069_6 Aminotransferase class-III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 495.0
SRD3_k127_4915069_7 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009736 499.0
SRD3_k127_4915069_8 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003981 423.0
SRD3_k127_4915069_9 PFAM respiratory-chain NADH dehydrogenase, subunit 1 K14087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008242 401.0
SRD3_k127_4925098_0 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 610.0
SRD3_k127_4925098_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 389.0
SRD3_k127_4925098_2 DNA polymerase Ligase (LigD) K01971,K10747 GO:0000166,GO:0000287,GO:0000726,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0003896,GO:0003899,GO:0003909,GO:0003910,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0004652,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006269,GO:0006281,GO:0006302,GO:0006303,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016874,GO:0016886,GO:0016895,GO:0017076,GO:0018130,GO:0019438,GO:0030145,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0033554,GO:0034061,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0070566,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0097747,GO:0140097,GO:0140098,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 364.0
SRD3_k127_4925098_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000001405 174.0
SRD3_k127_4925098_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.000000000000000000000000000000000001501 141.0
SRD3_k127_492810_0 Coenzyme A transferase K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 350.0
SRD3_k127_492810_1 PFAM Coenzyme A transferase K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005288 292.0
SRD3_k127_492810_2 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.000000000000000000000000000000000000000000000000000000000112 218.0
SRD3_k127_492810_3 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000146 184.0
SRD3_k127_492810_4 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000008452 181.0
SRD3_k127_492810_5 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K00087 - 1.17.1.4 0.00000000007374 64.0
SRD3_k127_492810_6 Psort location Cytoplasmic, score 8.87 - - - 0.0000001598 59.0
SRD3_k127_4929106_0 Beta-lactamase - - - 1.446e-319 988.0
SRD3_k127_4929106_1 Belongs to the aldehyde dehydrogenase family K00128,K00130,K00138,K00146,K10217 - 1.2.1.3,1.2.1.32,1.2.1.39,1.2.1.8,1.2.1.85 1.198e-243 760.0
SRD3_k127_4929106_2 Amidohydrolase K03392,K22213 - 4.1.1.45,4.1.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008129 354.0
SRD3_k127_4929106_3 Cupin 2, conserved barrel domain protein K00452 GO:0000334,GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0044237,GO:0044248,GO:0051213,GO:0055114 1.13.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 331.0
SRD3_k127_4929106_4 Endoribonuclease L-PSP K15067 - 3.5.99.5 0.0000000000000000000000000000000000000000000000000000000000000001367 224.0
SRD3_k127_4932468_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895,K01908 GO:0003674,GO:0003824,GO:0003987,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0017144,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046950,GO:0046951,GO:0050218,GO:0070013,GO:0071704,GO:1901568,GO:1901570,GO:1901576,GO:1902224 6.2.1.1,6.2.1.17 1.903e-307 957.0
SRD3_k127_4932468_1 Extracellular solute-binding protein K02027 - - 5.328e-213 670.0
SRD3_k127_4932468_2 methylmalonate-semialdehyde dehydrogenase K00140 - 1.2.1.18,1.2.1.27 2.173e-207 655.0
SRD3_k127_4932468_3 Belongs to the ABC transporter superfamily K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 470.0
SRD3_k127_4932468_4 Binding-protein-dependent transport system inner membrane component K02025,K10118,K10237 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 460.0
SRD3_k127_4932468_5 Binding-protein-dependent transport system inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 413.0
SRD3_k127_4932468_6 Saccharopine dehydrogenase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 336.0
SRD3_k127_4932468_7 PFAM Major Facilitator Superfamily K08177 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001566 258.0
SRD3_k127_4932468_8 DoxX K15977 - - 0.000000000000000000000000000000008024 134.0
SRD3_k127_4932468_9 FtsZ-dependent cytokinesis - - - 0.000000007988 69.0
SRD3_k127_4944993_0 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 0.0 1073.0
SRD3_k127_4944993_1 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 2.146e-281 888.0
SRD3_k127_4944993_10 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 539.0
SRD3_k127_4944993_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005329 385.0
SRD3_k127_4944993_12 mRNA catabolic process K06950,K09163 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005999 278.0
SRD3_k127_4944993_13 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000206 269.0
SRD3_k127_4944993_14 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004658 256.0
SRD3_k127_4944993_15 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000000003384 247.0
SRD3_k127_4944993_16 Peptidase family S41 K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000001438 244.0
SRD3_k127_4944993_17 plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000001338 206.0
SRD3_k127_4944993_18 Universal stress protein - - - 0.00000000000000000000000000000000000000000002831 172.0
SRD3_k127_4944993_19 DinB family - - - 0.00000000000000000000000000000000000000000004012 165.0
SRD3_k127_4944993_2 3-isopropylmalate dehydratase activity K01703,K01704,K01705 - 4.2.1.33,4.2.1.35,4.2.1.36 2.396e-276 866.0
SRD3_k127_4944993_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000614 149.0
SRD3_k127_4944993_22 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000002299 96.0
SRD3_k127_4944993_23 von Willebrand factor, type A - - - 0.00000000000000001129 96.0
SRD3_k127_4944993_24 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.0000000000008754 74.0
SRD3_k127_4944993_26 - - - - 0.000001509 54.0
SRD3_k127_4944993_27 Histidine kinase - - - 0.00005115 51.0
SRD3_k127_4944993_3 citrate CoA-transferase activity K01643 - 2.8.3.10 6.894e-275 852.0
SRD3_k127_4944993_4 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 2.768e-262 826.0
SRD3_k127_4944993_5 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 6.239e-244 763.0
SRD3_k127_4944993_6 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666 - - 2.155e-223 710.0
SRD3_k127_4944993_7 MmgE/PrpD family K01720 - 4.2.1.79 6.875e-218 686.0
SRD3_k127_4944993_8 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 4.535e-212 664.0
SRD3_k127_4944993_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 1.808e-197 625.0
SRD3_k127_4979411_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2639.0
SRD3_k127_4979411_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2492.0
SRD3_k127_4979411_10 Transposase IS200 like - - - 0.00000000000000000000000000000000000002223 148.0
SRD3_k127_4979411_11 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000000000000000001591 110.0
SRD3_k127_4979411_12 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000000627 87.0
SRD3_k127_4979411_13 PD-(D/E)XK endonuclease - - - 0.00000000003752 71.0
SRD3_k127_4979411_14 Aspartyl protease - - - 0.00000000006782 74.0
SRD3_k127_4979411_15 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00002021 52.0
SRD3_k127_4979411_2 Dienelactone hydrolase family - - - 0.0 1163.0
SRD3_k127_4979411_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 389.0
SRD3_k127_4979411_4 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 311.0
SRD3_k127_4979411_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000001517 234.0
SRD3_k127_4979411_6 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000007868 209.0
SRD3_k127_4979411_7 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000006321 187.0
SRD3_k127_4979411_8 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000002082 168.0
SRD3_k127_4979411_9 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000000002477 149.0
SRD3_k127_5011006_0 Belongs to the aldehyde dehydrogenase family K00130,K00135,K00146,K22187 - 1.2.1.16,1.2.1.20,1.2.1.39,1.2.1.79,1.2.1.8 1.063e-255 799.0
SRD3_k127_5011006_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 3.268e-231 728.0
SRD3_k127_5011006_2 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 379.0
SRD3_k127_5011006_3 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000075 188.0
SRD3_k127_5011006_4 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000000004378 89.0
SRD3_k127_5020464_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 495.0
SRD3_k127_5020464_1 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 403.0
SRD3_k127_5020464_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 317.0
SRD3_k127_5020464_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000004507 221.0
SRD3_k127_5020464_5 Dienelactone hydrolase family - - - 0.0008316 44.0
SRD3_k127_5027846_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1261.0
SRD3_k127_5027846_1 PFAM Glycosyl transferase family 2 - - - 3.027e-236 736.0
SRD3_k127_5027846_2 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 4.266e-198 620.0
SRD3_k127_5027846_3 DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 536.0
SRD3_k127_5027846_4 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008193 533.0
SRD3_k127_5027846_5 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004099 313.0
SRD3_k127_5027846_6 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000001314 208.0
SRD3_k127_5027846_7 Helix-hairpin-helix motif - - - 0.0000000000002127 81.0
SRD3_k127_5031641_0 PFAM nitrite and sulphite reductase 4Fe-4S K00392 - 1.8.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 526.0
SRD3_k127_5031641_1 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000003435 270.0
SRD3_k127_5031641_2 Belongs to the precorrin methyltransferase family K02303 - 2.1.1.107 0.000000000000000000000000000000000000000000000000000000000000000000000001842 252.0
SRD3_k127_5031641_3 Sirohaem biosynthesis protein central K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000000006398 182.0
SRD3_k127_5031641_4 Cupin superfamily (DUF985) K09705 - - 0.00000000000000004371 81.0
SRD3_k127_503994_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 568.0
SRD3_k127_503994_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 523.0
SRD3_k127_503994_2 MotA TolQ ExbB proton channel K03561,K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000719 403.0
SRD3_k127_503994_3 TIGRFAM TonB K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 329.0
SRD3_k127_503994_4 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.0000000000000000000000000000000000000000000000000000000000000001799 224.0
SRD3_k127_503994_5 Preprotein translocase, YajC K03210 - - 0.0000000000000000000001507 100.0
SRD3_k127_503994_6 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.0000004717 55.0
SRD3_k127_5054002_0 Belongs to the UbiD family K03182 - 4.1.1.98 2.749e-255 795.0
SRD3_k127_5054002_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003927 490.0
SRD3_k127_5054002_2 outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000002157 54.0
SRD3_k127_50673_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1254.0
SRD3_k127_50673_1 Peptidase dimerisation domain K01270 - - 3.875e-198 628.0
SRD3_k127_50673_10 - - - - 0.0000000000000008869 88.0
SRD3_k127_50673_11 4'-phosphopantetheinyl transferase superfamily K00997 - 2.7.8.7 0.0000000000001949 75.0
SRD3_k127_50673_12 - - - - 0.00000000008752 65.0
SRD3_k127_50673_13 acyl carrier protein - - - 0.000000005757 63.0
SRD3_k127_50673_14 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0005518 50.0
SRD3_k127_50673_2 TIGRFAM drug resistance transporter, EmrB QacA subfamily K03446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 619.0
SRD3_k127_50673_3 catalyzes the conversion of acetate and CoA to acetyl-CoA K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004595 553.0
SRD3_k127_50673_4 PFAM phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 512.0
SRD3_k127_50673_5 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 506.0
SRD3_k127_50673_6 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 504.0
SRD3_k127_50673_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000002364 141.0
SRD3_k127_50673_8 PFAM Surface antigen variable number K07277 - - 0.00000000000000000000000000000000000466 154.0
SRD3_k127_50673_9 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.00000000000000000004462 90.0
SRD3_k127_5070917_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1330.0
SRD3_k127_5070917_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005955 431.0
SRD3_k127_5070917_2 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 425.0
SRD3_k127_5070917_3 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 404.0
SRD3_k127_5070917_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 398.0
SRD3_k127_5070917_5 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007956 336.0
SRD3_k127_5070917_6 O-methyltransferase activity K05303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 292.0
SRD3_k127_5070917_7 outer membrane autotransporter barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009648 255.0
SRD3_k127_5070917_8 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000004836 67.0
SRD3_k127_5087574_0 peptidoglycan turnover K06958,K07102 GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 1.865e-202 641.0
SRD3_k127_5087574_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 629.0
SRD3_k127_5087574_2 Belongs to the beta-ketoacyl-ACP synthases family K14660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004308 472.0
SRD3_k127_5087574_3 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 406.0
SRD3_k127_5087574_4 Nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 306.0
SRD3_k127_5087574_5 Protein kinase domain K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000157 296.0
SRD3_k127_5087574_6 - - - - 0.0000000000000000000000000000000000000000000000000006218 197.0
SRD3_k127_5087574_7 Protein of unknown function (DUF2867) - - - 0.000000000000000000000000000000000000000000005017 169.0
SRD3_k127_5087574_8 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000002759 95.0
SRD3_k127_5122033_0 MmgE/PrpD family - - - 1.116e-197 628.0
SRD3_k127_5122033_1 Isocitrate/isopropylmalate dehydrogenase K07246 - 1.1.1.83,1.1.1.93,4.1.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005573 361.0
SRD3_k127_5122033_2 PFAM response regulator receiver K07665 - - 0.0000000000000000000000000000000000000000000000000000000001336 209.0
SRD3_k127_512378_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1132.0
SRD3_k127_512378_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009305 285.0
SRD3_k127_512378_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000000004976 240.0
SRD3_k127_512378_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000724 81.0
SRD3_k127_5125512_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 478.0
SRD3_k127_5125512_1 Peptidase C26 K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 312.0
SRD3_k127_5125512_2 May be involved in the transport of PQQ or its precursor to the periplasm K00784 - 3.1.26.11 0.0000000000000000000000007366 105.0
SRD3_k127_5125512_3 PAS domain - - - 0.000000000000000001125 91.0
SRD3_k127_5127623_0 Phenazine biosynthesis protein, PhzF family K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 372.0
SRD3_k127_5127623_1 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 299.0
SRD3_k127_5127623_2 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000009345 181.0
SRD3_k127_5127623_3 Dihydropyrimidinase-related protein 4 - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0007275,GO:0007399,GO:0008092,GO:0008150,GO:0009987,GO:0022008,GO:0030154,GO:0030182,GO:0031005,GO:0032501,GO:0032502,GO:0044424,GO:0044444,GO:0044464,GO:0048468,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0051219 - 0.0002031 44.0
SRD3_k127_5170353_0 secretion system protein K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 552.0
SRD3_k127_5170353_1 PFAM Uncharacterised conserved protein UCP033563 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 487.0
SRD3_k127_5170353_10 Belongs to the GSP D family K02280 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 348.0
SRD3_k127_5170353_11 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 326.0
SRD3_k127_5170353_12 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007749 316.0
SRD3_k127_5170353_13 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000000000000002426 209.0
SRD3_k127_5170353_14 PFAM type II secretion system K12511 - - 0.00000000000000000000000000000000000000000000000000000003907 211.0
SRD3_k127_5170353_15 Type II secretion system K12510 - - 0.000000000000000000000000000000000000000000000000000001897 214.0
SRD3_k127_5170353_16 flp pilus assembly protein CpaB K02279 - - 0.00000000000000000000000000000000000000000000000007533 188.0
SRD3_k127_5170353_17 Sporulation and spore germination - - - 0.000000000000000000000000000000000000001195 156.0
SRD3_k127_5170353_18 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000005607 141.0
SRD3_k127_5170353_19 AAA domain K02282 - - 0.00000000000000000000000000000001834 141.0
SRD3_k127_5170353_2 Cys/Met metabolism PLP-dependent enzyme K01739,K01760,K01761 - 2.5.1.48,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 457.0
SRD3_k127_5170353_20 Belongs to the GSP D family K02453 - - 0.0000000000000000000000000002159 131.0
SRD3_k127_5170353_21 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000001131 123.0
SRD3_k127_5170353_22 Type IV leader peptidase family K02278 - 3.4.23.43 0.0000000000000000001286 99.0
SRD3_k127_5170353_23 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000002645 89.0
SRD3_k127_5170353_24 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000004863 75.0
SRD3_k127_5170353_26 Fibronectin type 3 domain - - - 0.0000007013 61.0
SRD3_k127_5170353_27 Belongs to the glycosyl hydrolase 18 family K01183 - 3.2.1.14 0.000003812 59.0
SRD3_k127_5170353_28 TadE-like protein - - - 0.00002839 55.0
SRD3_k127_5170353_29 serine threonine protein kinase K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.00004116 48.0
SRD3_k127_5170353_3 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005805 436.0
SRD3_k127_5170353_30 TadE-like protein - - - 0.0003092 49.0
SRD3_k127_5170353_31 PFAM Flp Fap pilin component K02651 - - 0.0005787 45.0
SRD3_k127_5170353_4 Acetolactate synthase K00156,K01652 - 1.2.5.1,2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 442.0
SRD3_k127_5170353_5 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 425.0
SRD3_k127_5170353_6 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008082 396.0
SRD3_k127_5170353_7 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 404.0
SRD3_k127_5170353_8 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 349.0
SRD3_k127_5170353_9 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008073 358.0
SRD3_k127_5183462_0 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.0 1411.0
SRD3_k127_5183462_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 2.513e-251 794.0
SRD3_k127_5183462_10 - - - - 0.00000000000002333 81.0
SRD3_k127_5183462_11 chorismate mutase K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 0.00009347 49.0
SRD3_k127_5183462_2 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000904 502.0
SRD3_k127_5183462_3 NeuB family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 409.0
SRD3_k127_5183462_4 Hydantoinase/oxoprolinase K01473 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 390.0
SRD3_k127_5183462_5 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 371.0
SRD3_k127_5183462_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000002279 236.0
SRD3_k127_5183462_7 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000002196 187.0
SRD3_k127_5183462_8 4Fe-4S dicluster domain K05524 - - 0.00000000000000000000000000000000000000000000001679 174.0
SRD3_k127_5183462_9 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.00000000000001635 82.0
SRD3_k127_5218665_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000287 275.0
SRD3_k127_5218665_1 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000131 138.0
SRD3_k127_5254422_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07640 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009183 358.0
SRD3_k127_5254422_1 Transcriptional regulatory protein, C terminal K07662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 325.0
SRD3_k127_5254422_3 - - - - 0.000000005303 58.0
SRD3_k127_5254422_4 Tetratricopeptide TPR_2 repeat protein - - - 0.00000004095 65.0
SRD3_k127_5254422_5 LTXXQ motif family protein K06006 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0008150,GO:0009987,GO:0010033,GO:0014070,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0044464,GO:0050896,GO:0051082,GO:0061077,GO:1990507 - 0.00000005374 61.0
SRD3_k127_5266026_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1075.0
SRD3_k127_5266026_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 3.325e-260 808.0
SRD3_k127_5266026_10 VanZ like family - - - 0.000000000000000004602 94.0
SRD3_k127_5266026_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 603.0
SRD3_k127_5266026_3 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 601.0
SRD3_k127_5266026_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 438.0
SRD3_k127_5266026_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 398.0
SRD3_k127_5266026_6 FRG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 330.0
SRD3_k127_5266026_7 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 327.0
SRD3_k127_5266026_8 Ribosomal protein L17 K02879 - - 0.0000000000000000000000000000000000000000000000000000000000000001968 224.0
SRD3_k127_5266026_9 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000000000000000000000000000000001252 196.0
SRD3_k127_5273612_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 8.523e-295 921.0
SRD3_k127_5273612_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 2.57e-199 626.0
SRD3_k127_5273612_2 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008791 477.0
SRD3_k127_5273612_3 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 392.0
SRD3_k127_5273612_4 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 392.0
SRD3_k127_5273612_5 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 378.0
SRD3_k127_5273612_6 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 381.0
SRD3_k127_5273612_7 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.000000000000000000000000000000000000000000004011 173.0
SRD3_k127_5273612_8 - - - - 0.0000000000000000000000000000000000000000003006 158.0
SRD3_k127_5273612_9 Mannose-6-phosphate isomerase - - - 0.000000000000000001526 99.0
SRD3_k127_5317896_0 TIGRFAM Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 575.0
SRD3_k127_5317896_1 Histidine kinase K02478 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 554.0
SRD3_k127_5317896_10 SnoaL-like domain - - - 0.00000000000002858 81.0
SRD3_k127_5317896_2 MgtE intracellular N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 499.0
SRD3_k127_5317896_3 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 428.0
SRD3_k127_5317896_4 N-acetyl-alpha-D-glucosaminyl L-malate synthase K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006212 385.0
SRD3_k127_5317896_5 YdjC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008235 261.0
SRD3_k127_5317896_6 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000000000000000000000000000000000000000000000000001759 197.0
SRD3_k127_5317896_7 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000000000000000000000000000000000000000006302 183.0
SRD3_k127_5317896_8 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000679 177.0
SRD3_k127_5317896_9 - - - - 0.000000000000000006496 89.0
SRD3_k127_5336279_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 2.669e-247 771.0
SRD3_k127_5336279_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 5.085e-195 613.0
SRD3_k127_5336279_10 binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000000000000005651 209.0
SRD3_k127_5336279_11 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000000000000000144 203.0
SRD3_k127_5336279_12 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast K02881 - - 0.000000000000000000000000000000000000000000006677 167.0
SRD3_k127_5336279_13 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000000536 136.0
SRD3_k127_5336279_14 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000000000000005476 121.0
SRD3_k127_5336279_15 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000001327 118.0
SRD3_k127_5336279_16 Ribosomal protein L30 K02907 - - 0.0000000000000000001835 97.0
SRD3_k127_5336279_17 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000001451 72.0
SRD3_k127_5336279_2 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007081 417.0
SRD3_k127_5336279_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 339.0
SRD3_k127_5336279_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 302.0
SRD3_k127_5336279_5 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006498 292.0
SRD3_k127_5336279_6 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000612 285.0
SRD3_k127_5336279_7 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000004056 256.0
SRD3_k127_5336279_8 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000000000000000000000000007978 231.0
SRD3_k127_5336279_9 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000000008078 218.0
SRD3_k127_5355360_0 heat shock protein 70 K04043,K04044 - - 1.364e-297 924.0
SRD3_k127_5355360_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 488.0
SRD3_k127_5355360_2 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 351.0
SRD3_k127_5355360_3 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.0000000000000000000000000000000000000000000000000005252 186.0
SRD3_k127_5355360_4 FeS assembly protein IscX - - - 0.0000000000000000000000000006116 115.0
SRD3_k127_5355360_5 Cytochrome C biogenesis protein transmembrane region - - - 0.00000000000000000000001191 111.0
SRD3_k127_5355360_6 - - - - 0.00000001777 63.0
SRD3_k127_5355360_7 PFAM heat shock protein DnaJ K04082 - - 0.00000009578 55.0
SRD3_k127_5364050_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 6.742e-208 649.0
SRD3_k127_5364050_1 TIGRFAM NADH-quinone oxidoreductase, E subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000144 225.0
SRD3_k127_5411602_0 HD domain - - - 9.239e-236 753.0
SRD3_k127_5411602_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 1.747e-201 640.0
SRD3_k127_5411602_10 Belongs to the 'phage' integrase family K04763 - - 0.00000000000000000000000000000000000000000000000000000001989 211.0
SRD3_k127_5411602_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000008764 182.0
SRD3_k127_5411602_12 Domain of unknown function (DUF4252) - - - 0.0000000000000000000000000000000000003512 146.0
SRD3_k127_5411602_13 SNARE associated Golgi protein - - - 0.000000000000000000000000000208 123.0
SRD3_k127_5411602_14 LUD domain K00782 - - 0.000000000000000000000753 103.0
SRD3_k127_5411602_15 Ferredoxin - - - 0.0000000000000000003302 101.0
SRD3_k127_5411602_16 HD domain - - - 0.0000000000001577 80.0
SRD3_k127_5411602_17 - - - - 0.0000000000001682 75.0
SRD3_k127_5411602_2 Phospholipase B - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 614.0
SRD3_k127_5411602_3 cluster binding protein K18929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 593.0
SRD3_k127_5411602_4 Zinc dependent phospholipase C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 473.0
SRD3_k127_5411602_5 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 452.0
SRD3_k127_5411602_6 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 383.0
SRD3_k127_5411602_7 Cysteine-rich domain K18928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006029 313.0
SRD3_k127_5411602_8 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000186 281.0
SRD3_k127_5411602_9 O-methyltransferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005951 266.0
SRD3_k127_559704_0 CoA binding domain K01905,K22224 - 6.2.1.13 2.588e-201 647.0
SRD3_k127_559704_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 614.0
SRD3_k127_559704_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008928 515.0
SRD3_k127_559704_3 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 415.0
SRD3_k127_559704_4 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 355.0
SRD3_k127_559704_5 D-ala-D-ala dipeptidase K08641 - 3.4.13.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 317.0
SRD3_k127_559704_6 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007273 253.0
SRD3_k127_559704_7 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004354 246.0
SRD3_k127_559704_8 domain protein - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000006941 202.0
SRD3_k127_559704_9 DNA integration - - - 0.000000000000000000000000000000000001669 149.0
SRD3_k127_5638066_0 NADH dehydrogenase K00335,K18331 - 1.12.1.3,1.6.5.3 4.907e-246 773.0
SRD3_k127_5638066_1 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K09181 - - 0.00000000000000000000000000000000000000000000000000000000000000000004318 235.0
SRD3_k127_5638066_2 PFAM Respiratory-chain NADH dehydrogenase 24 Kd subunit K00334,K18330 - 1.12.1.3,1.6.5.3 0.000000000000000000000000000000000000000006485 159.0
SRD3_k127_5638066_3 iron-sulfur cluster assembly K00336,K18332 - 1.12.1.3,1.6.5.3 0.000001504 53.0
SRD3_k127_5651940_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.0 1459.0
SRD3_k127_5651940_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07789 - - 0.0 1332.0
SRD3_k127_5651940_10 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000000000000002546 173.0
SRD3_k127_5651940_11 BioY family K03523 - - 0.00000000000000000000000000000000000000000006778 167.0
SRD3_k127_5651940_12 cytochrome - - - 0.000000000000000000000000000000675 132.0
SRD3_k127_5651940_13 response regulator, receiver - - - 0.000000000000000000000001218 108.0
SRD3_k127_5651940_14 Helix-hairpin-helix motif - - - 0.00000000000001494 79.0
SRD3_k127_5651940_2 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1300.0
SRD3_k127_5651940_3 PFAM Glycosyl transferase family 2 - - - 8.217e-262 815.0
SRD3_k127_5651940_4 Involved in the tonB-independent uptake of proteins - - - 1.6e-222 726.0
SRD3_k127_5651940_5 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 1.165e-201 633.0
SRD3_k127_5651940_6 DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 538.0
SRD3_k127_5651940_7 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 427.0
SRD3_k127_5651940_8 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 298.0
SRD3_k127_5651940_9 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000001358 216.0
SRD3_k127_5656800_0 Carboxypeptidase regulatory-like domain - - - 0.0 1431.0
SRD3_k127_5656800_1 Urocanase Rossmann-like domain K01712 - 4.2.1.49 0.0 1025.0
SRD3_k127_5656800_10 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001167 250.0
SRD3_k127_5656800_11 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000000000000000000000000000000000003221 226.0
SRD3_k127_5656800_12 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000000000000002966 162.0
SRD3_k127_5656800_13 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.000000000000000000000000000000000000000001424 162.0
SRD3_k127_5656800_14 Collagen triple helix repeat (20 copies) - - - 0.000000000000000000000289 110.0
SRD3_k127_5656800_15 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.0000000000000000002129 90.0
SRD3_k127_5656800_2 PFAM Type II secretion system protein E K02454,K02504,K02652 - - 6.943e-296 917.0
SRD3_k127_5656800_3 Belongs to the GSP D family K02453 - - 1.549e-282 889.0
SRD3_k127_5656800_4 cellulose binding - - - 2.676e-226 704.0
SRD3_k127_5656800_5 PFAM Peptidase M1, membrane alanine aminopeptidase K01256,K08776 - 3.4.11.2 2.7e-224 724.0
SRD3_k127_5656800_6 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 1.182e-206 662.0
SRD3_k127_5656800_7 Type II/IV secretion system protein K02669 - - 7.532e-194 609.0
SRD3_k127_5656800_8 PFAM Type II secretion system F domain K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005545 589.0
SRD3_k127_5656800_9 Amidohydrolase family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 521.0
SRD3_k127_5672990_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 1.314e-254 798.0
SRD3_k127_5672990_1 Peptidase family M1 domain - - - 4.249e-221 721.0
SRD3_k127_5672990_10 Kelch - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005958 291.0
SRD3_k127_5672990_11 RNA recognition motif - - - 0.000000000000000000000000000001557 124.0
SRD3_k127_5672990_12 Uncharacterized protein conserved in bacteria (DUF2059) K09924 - - 0.00000000000000000000001041 107.0
SRD3_k127_5672990_14 cellulase activity K01179,K01183,K13381,K20276 - 3.2.1.14,3.2.1.17,3.2.1.4 0.00000000000001226 88.0
SRD3_k127_5672990_15 tail collar domain protein K06237 - - 0.00005308 54.0
SRD3_k127_5672990_16 Belongs to the glycosyl hydrolase 18 family K01183 - 3.2.1.14 0.00006996 56.0
SRD3_k127_5672990_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 525.0
SRD3_k127_5672990_3 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008686 517.0
SRD3_k127_5672990_4 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007876 436.0
SRD3_k127_5672990_5 May be involved in the transport of PQQ or its precursor to the periplasm K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009324 398.0
SRD3_k127_5672990_6 Belongs to the class-I aminoacyl-tRNA synthetase family K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 395.0
SRD3_k127_5672990_7 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 401.0
SRD3_k127_5672990_8 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008066 372.0
SRD3_k127_5672990_9 Protein involved in outer membrane biogenesis K07289 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 361.0
SRD3_k127_5685277_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 7.907e-222 701.0
SRD3_k127_5685277_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005172 303.0
SRD3_k127_5685277_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 322.0
SRD3_k127_5685277_3 recA bacterial DNA recombination protein - - - 0.000000000000000000000000000000000000000000000000000006536 202.0
SRD3_k127_5688593_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007791 485.0
SRD3_k127_5688593_1 ABC transporter K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 363.0
SRD3_k127_5688593_2 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 304.0
SRD3_k127_5688593_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 288.0
SRD3_k127_5688593_5 - - - - 0.00000000000000305 77.0
SRD3_k127_5691915_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 527.0
SRD3_k127_5691915_1 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 454.0
SRD3_k127_5691915_2 SMART band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 372.0
SRD3_k127_5691915_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006184 331.0
SRD3_k127_5691915_4 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001324 269.0
SRD3_k127_5691915_5 helix_turn_helix, cAMP Regulatory protein K21564 - - 0.0000000000000000000000000000000000005648 151.0
SRD3_k127_5691915_6 AAA domain - - - 0.00000000000000000000000000000000002421 140.0
SRD3_k127_5691915_7 Sporulation related domain - - - 0.00000000000000000000000000001344 126.0
SRD3_k127_5703361_0 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 1.521e-281 882.0
SRD3_k127_5703361_1 PFAM Organic solvent tolerance protein K04744 - - 5.848e-261 833.0
SRD3_k127_5703361_10 pfam rdd - - - 0.0000000000000000000000000000000000000000004382 173.0
SRD3_k127_5703361_11 Transcription termination factor nusG - - - 0.0000000000000000000000000000000000000000007675 163.0
SRD3_k127_5703361_12 metal cluster binding K06940 - - 0.000000000000000000000000000000000000000001726 158.0
SRD3_k127_5703361_13 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000003758 132.0
SRD3_k127_5703361_14 TIGRFAM TonB K03832 - - 0.0000000000001851 84.0
SRD3_k127_5703361_15 Phosphoglucose isomerase K01810 - 5.3.1.9 0.0000001309 57.0
SRD3_k127_5703361_2 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 434.0
SRD3_k127_5703361_3 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 379.0
SRD3_k127_5703361_4 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 359.0
SRD3_k127_5703361_5 Bacterial regulatory protein, Fis family K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 353.0
SRD3_k127_5703361_6 G-rich domain on putative tyrosine kinase K16554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001956 282.0
SRD3_k127_5703361_7 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000002484 204.0
SRD3_k127_5703361_8 proline dipeptidase activity K08688 - 3.5.3.3 0.00000000000000000000000000000000000000000000000001794 195.0
SRD3_k127_5703361_9 Type II secretory pathway component ExeA - - - 0.000000000000000000000000000000000000000000000007082 196.0
SRD3_k127_5733644_0 TIGRFAM drug resistance transporter, EmrB QacA subfamily K03446 - - 2.734e-220 694.0
SRD3_k127_5733644_1 Biotin-lipoyl like K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 445.0
SRD3_k127_5733644_2 outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009213 392.0
SRD3_k127_5733644_3 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.00000000000000000000009304 100.0
SRD3_k127_5733758_0 formate C-acetyltransferase glycine radical - - - 2.979e-301 945.0
SRD3_k127_5733758_1 FAD linked oxidases, C-terminal domain K00102,K00104 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0033554,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 1.1.2.4,1.1.3.15 1.042e-213 673.0
SRD3_k127_5733758_2 Cysteine-rich domain K11473 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 523.0
SRD3_k127_5733758_3 Zinc-binding dehydrogenase K00001,K00121 - 1.1.1.1,1.1.1.284 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005013 486.0
SRD3_k127_5733758_4 FAD binding domain K11472 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003473 361.0
SRD3_k127_5733758_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007754 333.0
SRD3_k127_5733758_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 303.0
SRD3_k127_5733758_7 TIGRFAM glycyl-radical enzyme activating protein family K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 295.0
SRD3_k127_5733758_8 cAMP biosynthetic process K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008626 275.0
SRD3_k127_5733758_9 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000001511 197.0
SRD3_k127_5736913_0 Aminotransferase, class V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000521 484.0
SRD3_k127_5736913_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 430.0
SRD3_k127_5736913_2 phosphoserine phosphatase K01079 GO:0000287,GO:0001505,GO:0003674,GO:0003824,GO:0004647,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006563,GO:0006564,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0019752,GO:0042133,GO:0042136,GO:0042578,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046872,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000004836 230.0
SRD3_k127_5736913_3 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000001981 154.0
SRD3_k127_5736913_4 DNA-templated transcription, initiation - - - 0.0000000000000000000000000000000008614 137.0
SRD3_k127_5736913_6 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000001423 71.0
SRD3_k127_5736913_8 endonuclease K07451,K07454 - - 0.000006327 51.0
SRD3_k127_5736913_9 endonuclease K07451,K07454 - - 0.0001622 48.0
SRD3_k127_5755608_0 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 4.537e-283 877.0
SRD3_k127_5765340_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 606.0
SRD3_k127_5765340_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 502.0
SRD3_k127_5765340_10 Protein of unknown function (DUF2911) - - - 0.000004273 57.0
SRD3_k127_5765340_2 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 443.0
SRD3_k127_5765340_3 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 403.0
SRD3_k127_5765340_4 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 360.0
SRD3_k127_5765340_5 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002295 285.0
SRD3_k127_5765340_6 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000001117 237.0
SRD3_k127_5765340_7 PFAM Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.0000000000000000000000000000000000000000000000000000000000004418 222.0
SRD3_k127_5765340_8 Stress responsive A B barrel domain protein - - - 0.000000000000000000000000000003537 122.0
SRD3_k127_5765340_9 isomerase activity K01821 - 5.3.2.6 0.00000000000001263 77.0
SRD3_k127_5768750_0 PAS domain - - - 2.444e-236 747.0
SRD3_k127_5768750_1 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 3.137e-235 734.0
SRD3_k127_5768750_2 Sigma-54 interaction domain - - - 1.318e-218 687.0
SRD3_k127_5768750_3 response regulator, receiver - - - 4.68e-216 678.0
SRD3_k127_5768750_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 512.0
SRD3_k127_5768750_5 Peptidase family M54 K06974 - - 0.0000000000000000000000000000000000000000000000000000000000000000003418 233.0
SRD3_k127_5768750_6 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000002378 165.0
SRD3_k127_5768750_7 RESPONSE REGULATOR receiver - - - 0.0000000000000000785 85.0
SRD3_k127_5768750_8 - - - - 0.000000000000243 78.0
SRD3_k127_5790998_0 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 1.061e-241 766.0
SRD3_k127_5790998_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 398.0
SRD3_k127_5790998_2 Uncharacterized conserved protein (COG2071) K09166 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005277 272.0
SRD3_k127_5790998_3 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000003378 226.0
SRD3_k127_5790998_4 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000004425 193.0
SRD3_k127_5790998_5 PFAM Sel1 domain protein repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000004442 186.0
SRD3_k127_5790998_6 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000001013 185.0
SRD3_k127_5790998_7 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000000000000000001717 128.0
SRD3_k127_5790998_8 - - - - 0.0000000000000000000009015 100.0
SRD3_k127_5793253_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 1.251e-242 760.0
SRD3_k127_5793253_1 extracellular solute-binding protein, family 5 K02035 - - 1.97e-213 672.0
SRD3_k127_5793253_2 Belongs to the GSP D family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 474.0
SRD3_k127_5793253_3 YmdB-like protein K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 411.0
SRD3_k127_5793253_4 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007208 253.0
SRD3_k127_5793253_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008395 255.0
SRD3_k127_5793253_6 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000008104 238.0
SRD3_k127_5793253_7 phospholipase C - - - 0.000000000000000000000000000000000000000000000000000000000000161 239.0
SRD3_k127_5793253_8 - - - - 0.0000000000000000003167 89.0
SRD3_k127_5793253_9 - - - - 0.00001554 50.0
SRD3_k127_5807800_0 Mu-like prophage FluMu protein gp28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 565.0
SRD3_k127_5807800_1 Phage portal protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 502.0
SRD3_k127_5807800_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 350.0
SRD3_k127_5807800_3 Protein of unknown function (DUF3037) - - - 0.000000000000000000000000000000000000000000000000000000000000000003491 235.0
SRD3_k127_5807800_4 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000003577 139.0
SRD3_k127_5807800_5 - - - - 0.000000000000000000000000000003298 126.0
SRD3_k127_5807800_6 - K21449 - - 0.0000000000000000000000000013 132.0
SRD3_k127_581415_0 ATP-dependent DNA helicase RecG K03655 - 3.6.4.12 0.0 1019.0
SRD3_k127_581415_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008011 587.0
SRD3_k127_581415_2 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 469.0
SRD3_k127_581415_3 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 464.0
SRD3_k127_581415_4 Domain of Unknown Function (DUF1259) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000455 250.0
SRD3_k127_581415_5 protein-(glutamine-N5) methyltransferase activity K02493,K16868 - 2.1.1.265,2.1.1.297 0.0000000000000000000000000000000000000000000000000000004108 198.0
SRD3_k127_581415_6 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000005183 176.0
SRD3_k127_581415_8 (Rhomboid) family - - - 0.000007146 49.0
SRD3_k127_5817044_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004302 536.0
SRD3_k127_5817044_1 PFAM phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008309 507.0
SRD3_k127_5817044_10 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000007328 195.0
SRD3_k127_5817044_11 - K14340 - - 0.000000000000000000000000000000000000000000001029 185.0
SRD3_k127_5817044_12 - - - - 0.00000000000000000000000000000000000000701 146.0
SRD3_k127_5817044_13 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000002858 116.0
SRD3_k127_5817044_14 Proton-conducting membrane transporter K00343 - 1.6.5.3 0.000000000001478 69.0
SRD3_k127_5817044_2 extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008064 485.0
SRD3_k127_5817044_3 translation release factor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 398.0
SRD3_k127_5817044_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007702 391.0
SRD3_k127_5817044_5 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009198 306.0
SRD3_k127_5817044_6 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002112 246.0
SRD3_k127_5817044_7 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000001966 238.0
SRD3_k127_5817044_8 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000000000000000000000000001784 213.0
SRD3_k127_5817044_9 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000000000000000000002912 192.0
SRD3_k127_5826464_0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 5.726e-316 976.0
SRD3_k127_5826464_1 IgA Peptidase M64 - - - 2.258e-204 645.0
SRD3_k127_5826464_10 hyperosmotic response - - - 0.0000000000000000000000000000000000000000003774 164.0
SRD3_k127_5826464_11 CBS domain - - - 0.000000000000000000000000000000000008895 147.0
SRD3_k127_5826464_12 TIGRFAM TonB K03832 - - 0.0000000000000000000000000005634 128.0
SRD3_k127_5826464_13 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.00000000000000001626 93.0
SRD3_k127_5826464_14 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000002829 80.0
SRD3_k127_5826464_15 - - - - 0.0000008022 59.0
SRD3_k127_5826464_16 YtxH-like protein - - - 0.00008467 50.0
SRD3_k127_5826464_2 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 501.0
SRD3_k127_5826464_3 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 445.0
SRD3_k127_5826464_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007284 354.0
SRD3_k127_5826464_5 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007697 325.0
SRD3_k127_5826464_6 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001958 279.0
SRD3_k127_5826464_7 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000002414 263.0
SRD3_k127_5826464_8 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000001548 263.0
SRD3_k127_5826464_9 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000006733 218.0
SRD3_k127_5830391_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 6.93e-203 640.0
SRD3_k127_5830391_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 1.284e-201 638.0
SRD3_k127_5830391_10 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.000000000000000000000000000000000000000000000000000000000000000000002397 238.0
SRD3_k127_5830391_11 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000006293 96.0
SRD3_k127_5830391_13 Bacterial regulatory protein, Fis family K07713 - - 0.0000008127 56.0
SRD3_k127_5830391_14 Unextendable partial coding region - - - 0.00005036 45.0
SRD3_k127_5830391_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008092 605.0
SRD3_k127_5830391_3 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 599.0
SRD3_k127_5830391_4 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000875 561.0
SRD3_k127_5830391_5 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 519.0
SRD3_k127_5830391_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 434.0
SRD3_k127_5830391_7 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 402.0
SRD3_k127_5830391_8 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005711 357.0
SRD3_k127_5830391_9 Cell division protein FtsQ K03589 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 332.0
SRD3_k127_5844456_0 Cytochrome c - - - 0.0 1148.0
SRD3_k127_5844456_1 Ammonium Transporter Family K03320 - - 1.361e-293 908.0
SRD3_k127_5844456_10 ferrochelatase activity K01772 GO:0003674,GO:0003824,GO:0004325,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009314,GO:0009416,GO:0009628,GO:0009987,GO:0016020,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0050896,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 295.0
SRD3_k127_5844456_11 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001371 261.0
SRD3_k127_5844456_12 oxidoreductase activity, acting on diphenols and related substances as donors K02636,K03886 - 1.10.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000004242 246.0
SRD3_k127_5844456_13 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003627 253.0
SRD3_k127_5844456_14 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000006966 237.0
SRD3_k127_5844456_15 deoxyhypusine monooxygenase activity K00627,K02160,K07402 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000001223 219.0
SRD3_k127_5844456_16 4Fe-4S binding domain K00395,K02572,K03616 - 1.8.99.2 0.00000000000000000000000000000000000000000000000000000002418 198.0
SRD3_k127_5844456_17 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000001599 170.0
SRD3_k127_5844456_18 Cytochrome oxidase assembly protein K02259 - - 0.000000000000000000000000000000000000000000007504 176.0
SRD3_k127_5844456_19 Protein of unknown function (DUF420) K08976 - - 0.00000000000000000000000000000000000000002266 156.0
SRD3_k127_5844456_2 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 552.0
SRD3_k127_5844456_20 - - - - 0.00000000000000000000000000000008846 128.0
SRD3_k127_5844456_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 501.0
SRD3_k127_5844456_4 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 470.0
SRD3_k127_5844456_5 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005007 453.0
SRD3_k127_5844456_6 Ferric reductase like transmembrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004773 418.0
SRD3_k127_5844456_7 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 411.0
SRD3_k127_5844456_8 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 389.0
SRD3_k127_5844456_9 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 354.0
SRD3_k127_585126_0 Peptidase S46 - - - 1.619e-194 629.0
SRD3_k127_585126_1 lipoprotein transporter activity K02003 - - 0.0000000000000000001032 89.0
SRD3_k127_585126_2 Helix-hairpin-helix motif - - - 0.000001772 61.0
SRD3_k127_5851749_0 phenylalanyl-tRNA synthetase beta subunit K01890 - 6.1.1.20 8.697e-262 826.0
SRD3_k127_5851749_1 Histidine kinase K02482 - 2.7.13.3 9.645e-242 778.0
SRD3_k127_5851749_10 Methyltransferase, chemotaxis proteins - - - 0.0000000000000000000000000000000000003544 153.0
SRD3_k127_5851749_11 amine dehydrogenase activity - - - 0.000000000000000000000000000000007473 145.0
SRD3_k127_5851749_12 Integral membrane protein DUF92 - - - 0.0000000000000000000000000000001177 135.0
SRD3_k127_5851749_13 SNARE associated Golgi protein - - - 0.000000000000000000000002659 108.0
SRD3_k127_5851749_14 Putative Ig domain - - - 0.000000000000000004752 94.0
SRD3_k127_5851749_15 - - - - 0.0000000002624 73.0
SRD3_k127_5851749_16 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000002045 55.0
SRD3_k127_5851749_17 - - - - 0.00001254 55.0
SRD3_k127_5851749_2 Bacterial regulatory protein, Fis family - - - 4.945e-194 615.0
SRD3_k127_5851749_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 520.0
SRD3_k127_5851749_4 Ku70/Ku80 beta-barrel domain K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 371.0
SRD3_k127_5851749_5 Peptidase family S51 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 352.0
SRD3_k127_5851749_6 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008393 312.0
SRD3_k127_5851749_7 Two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001344 278.0
SRD3_k127_5851749_8 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000005748 166.0
SRD3_k127_5851749_9 Response regulator, receiver - - - 0.0000000000000000000000000000000000000000008607 161.0
SRD3_k127_5872007_0 Deoxyribodipyrimidine photo-lyase-related protein K06876 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 539.0
SRD3_k127_5872007_1 - - - - 0.00000000000000000000000000000000000000000000000000000000008276 220.0
SRD3_k127_590722_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 486.0
SRD3_k127_590722_1 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001681 246.0
SRD3_k127_590722_3 SnoaL-like polyketide cyclase - - - 0.00000000001873 69.0
SRD3_k127_590722_4 metal ion permease K07089 - - 0.000000004119 58.0
SRD3_k127_5969291_0 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007923 494.0
SRD3_k127_5969291_1 response regulator, receiver K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009048 332.0
SRD3_k127_5981565_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 2.109e-220 694.0
SRD3_k127_5981565_1 Aminotransferase class-V K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000963 443.0
SRD3_k127_5981565_2 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 435.0
SRD3_k127_5981565_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 359.0
SRD3_k127_5981565_4 aminoacyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008393 339.0
SRD3_k127_5981565_5 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 330.0
SRD3_k127_5981565_6 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 327.0
SRD3_k127_5981565_7 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002014 274.0
SRD3_k127_5981565_8 Thiolase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000006491 207.0
SRD3_k127_5981565_9 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000005986 92.0
SRD3_k127_5996301_0 Voltage gated chloride channel - - - 1.22e-257 809.0
SRD3_k127_5996301_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 6.109e-216 678.0
SRD3_k127_5996301_2 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 543.0
SRD3_k127_5996301_3 AIR carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007073 364.0
SRD3_k127_5996301_4 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007309 275.0
SRD3_k127_5996301_5 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000003351 185.0
SRD3_k127_5996301_6 MarR family - - - 0.000000000000000000000000000000000000000000000000005778 187.0
SRD3_k127_5996301_7 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000001153 170.0
SRD3_k127_5997130_0 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 419.0
SRD3_k127_5997130_1 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 396.0
SRD3_k127_5997130_2 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000001056 214.0
SRD3_k127_5997130_3 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000003687 194.0
SRD3_k127_5997130_4 LemA family K03744 - - 0.000000000000000000000000000000000000000001224 162.0
SRD3_k127_5997130_5 Protein of unknown function (DUF507) K09804 - - 0.0000000000000000000000000000000000001576 144.0
SRD3_k127_5997130_6 metalloendopeptidase activity K03799 - - 0.0000000000000000000000000000000001342 148.0
SRD3_k127_5997130_7 Protein of unknown function (DUF507) - - - 0.0000000000000000000000000002224 116.0
SRD3_k127_6001335_0 PFAM natural resistance-associated macrophage protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 603.0
SRD3_k127_6001335_1 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 407.0
SRD3_k127_6001335_2 HAD-superfamily hydrolase, subfamily IIB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000661 347.0
SRD3_k127_6001335_3 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000002032 210.0
SRD3_k127_6001335_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K16079 - - 0.000000000000000000000000003689 118.0
SRD3_k127_6013208_0 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 604.0
SRD3_k127_6013208_1 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 606.0
SRD3_k127_6013208_2 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000003021 173.0
SRD3_k127_6013208_3 Putative zinc-finger - - - 0.00000000000000000000000000000068 122.0
SRD3_k127_6013208_4 RNA polymerase sigma factor K03088 - - 0.000006093 48.0
SRD3_k127_6013937_0 D-aminoacylase domain protein K01465,K06015 - 3.5.1.81,3.5.2.3 3.001e-250 783.0
SRD3_k127_6013937_1 MacB-like periplasmic core domain K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 520.0
SRD3_k127_6013937_2 methyltransferase activity K00587 - 2.1.1.100 0.0000000000000000000000000000000000000000000000001186 183.0
SRD3_k127_6013937_3 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 0.0000000006455 60.0
SRD3_k127_6026461_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 3.827e-237 739.0
SRD3_k127_6026461_1 signal transduction histidine kinase - - - 4.961e-205 654.0
SRD3_k127_6026461_2 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 360.0
SRD3_k127_6026461_3 YjbR - - - 0.0000000000000000000000000003757 121.0
SRD3_k127_6026461_4 response regulator, receiver K00384,K07315,K20977 - 1.8.1.9,3.1.3.3 0.000000000000009049 83.0
SRD3_k127_6032054_0 Transposase domain (DUF772) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 505.0
SRD3_k127_6032054_1 GDSL-like Lipase/Acylhydrolase - - - 0.0000000000000000000000002964 105.0
SRD3_k127_6040589_0 Isocitrate lyase family K01637 - 4.1.3.1 1.228e-198 629.0
SRD3_k127_6040589_1 IstB-like ATP binding protein K02315 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 313.0
SRD3_k127_6040589_2 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000005697 241.0
SRD3_k127_6040589_3 DinB family - - - 0.0000000000000000000000000000000000000000249 155.0
SRD3_k127_6040589_4 CAAX protease self-immunity K07052,K09696 - - 0.00000000000000000000005292 109.0
SRD3_k127_6040589_5 peptidase K01415,K07386 - 3.4.24.71 0.000000000000000002917 87.0
SRD3_k127_6052424_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1276.0
SRD3_k127_6052424_1 Bacterial protein of unknown function (DUF885) - - - 8.325e-208 666.0
SRD3_k127_6052424_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000771 275.0
SRD3_k127_6052424_11 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001135 256.0
SRD3_k127_6052424_12 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000001831 214.0
SRD3_k127_6052424_13 MerR HTH family regulatory protein K13640 - - 0.00000000000000000000000000000000000000000000000001545 182.0
SRD3_k127_6052424_14 PFAM Peptidase M22, glycoprotease K14742 - - 0.000000000000000000000000000000000000000001097 165.0
SRD3_k127_6052424_15 Domain of unknown function (DUF4870) K09940 - - 0.00000000000000000000000000000000147 134.0
SRD3_k127_6052424_16 Protein of unknown function (DUF465) - - - 0.000000000000000000006835 94.0
SRD3_k127_6052424_17 Zincin-like metallopeptidase - - - 0.00000000000000000001395 95.0
SRD3_k127_6052424_18 ABC transporter, transmembrane K18890 - - 0.0000000000000000000537 93.0
SRD3_k127_6052424_19 Histone deacetylase domain - - - 0.0000000000000000008476 87.0
SRD3_k127_6052424_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 1.687e-207 651.0
SRD3_k127_6052424_20 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000002267 91.0
SRD3_k127_6052424_3 amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 569.0
SRD3_k127_6052424_4 Methyltransferase small domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 507.0
SRD3_k127_6052424_5 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 483.0
SRD3_k127_6052424_6 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007429 469.0
SRD3_k127_6052424_7 ArgK protein K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008033 462.0
SRD3_k127_6052424_8 Phosphoesterase family K01114 - 3.1.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 453.0
SRD3_k127_6052424_9 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 381.0
SRD3_k127_609329_0 GGDEF domain - - - 1.626e-203 661.0
SRD3_k127_609329_1 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 1.954e-198 627.0
SRD3_k127_609329_10 - - - - 0.0000000005085 66.0
SRD3_k127_609329_11 - - - - 0.00000000194 61.0
SRD3_k127_609329_2 AMP-binding enzyme C-terminal domain K00666,K01897,K18660 - 6.2.1.3 1.576e-197 627.0
SRD3_k127_609329_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009216 538.0
SRD3_k127_609329_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 389.0
SRD3_k127_609329_5 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 328.0
SRD3_k127_609329_6 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002782 254.0
SRD3_k127_609329_7 Cupin - - - 0.0000000000000000000000000000000000008618 146.0
SRD3_k127_609329_8 Transglycosylase associated protein - - - 0.000000000000000000000000000001505 123.0
SRD3_k127_609329_9 - - - - 0.00000000001197 68.0
SRD3_k127_6098369_0 Delta-1-pyrroline-5-carboxylate dehydrogenase K00294 - 1.2.1.88 3.558e-235 741.0
SRD3_k127_6098369_1 Peptidase family M1 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 524.0
SRD3_k127_6098369_10 FCD - - - 0.0000000000000000000000000000000000000001449 156.0
SRD3_k127_6098369_11 PFAM ATP-binding region ATPase domain protein K07709 - 2.7.13.3 0.00000000000000000000000000000000000005843 160.0
SRD3_k127_6098369_12 PilZ domain - - - 0.000000000000000000000003576 106.0
SRD3_k127_6098369_14 - - - - 0.0000000000000003339 91.0
SRD3_k127_6098369_15 - - - - 0.0000000000000006063 81.0
SRD3_k127_6098369_2 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 387.0
SRD3_k127_6098369_3 Glucose inhibited division protein A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006022 318.0
SRD3_k127_6098369_4 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 287.0
SRD3_k127_6098369_5 GPR1 FUN34 yaaH family protein K07034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002792 260.0
SRD3_k127_6098369_6 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000002375 211.0
SRD3_k127_6098369_7 peroxiredoxin activity K01607,K03469 - 3.1.26.4,4.1.1.44 0.0000000000000000000000000000000000000000000000000000000001115 207.0
SRD3_k127_6098369_8 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000001066 203.0
SRD3_k127_6098369_9 - - - - 0.00000000000000000000000000000000000000000000000008171 186.0
SRD3_k127_6101307_0 Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate K01955 - 6.3.5.5 0.0 1248.0
SRD3_k127_6101307_1 TIGRFAM Carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 1.676e-202 634.0
SRD3_k127_6101307_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004102 471.0
SRD3_k127_6101307_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 343.0
SRD3_k127_6101307_4 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000009647 259.0
SRD3_k127_6101307_5 CYTH K05873 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000001476 231.0
SRD3_k127_6101307_6 PAS domain - - - 0.000000000000000000000000000000000000000000000002809 193.0
SRD3_k127_6101307_7 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000002582 147.0
SRD3_k127_6101307_8 - - - - 0.000000000000000000000000000000000001925 143.0
SRD3_k127_6130168_0 Radical SAM - - - 0.0 1164.0
SRD3_k127_6130168_1 Belongs to the aldehyde dehydrogenase family K00130,K00135,K00146,K22187 - 1.2.1.16,1.2.1.20,1.2.1.39,1.2.1.79,1.2.1.8 9.596e-258 801.0
SRD3_k127_6130168_11 - - - - 0.0000000000000000000000000001845 124.0
SRD3_k127_6130168_13 - - - - 0.00009182 55.0
SRD3_k127_6130168_14 Type II transport protein GspH K08084 - - 0.000102 53.0
SRD3_k127_6130168_15 Prokaryotic N-terminal methylation motif - - - 0.0002752 52.0
SRD3_k127_6130168_16 TIGRFAM Pilus modification type IV, PilV K02671 - - 0.0004264 51.0
SRD3_k127_6130168_2 Radical SAM superfamily K06937 - - 1.421e-243 765.0
SRD3_k127_6130168_3 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 385.0
SRD3_k127_6130168_5 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004978 268.0
SRD3_k127_6130168_6 - - - - 0.00000000000000000000000000000000000000000000000000000000006104 212.0
SRD3_k127_6130168_7 Oxidoreductase - - - 0.0000000000000000000000000000000000000000000000001244 189.0
SRD3_k127_6130168_8 PFAM Histidine triad (HIT) protein K02503 - - 0.000000000000000000000000000000000000000000000008565 177.0
SRD3_k127_6130168_9 COGs COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) - - - 0.00000000000000000000000000000000000000007696 159.0
SRD3_k127_6130581_0 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 557.0
SRD3_k127_6130581_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000007472 187.0
SRD3_k127_6130581_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000008182 136.0
SRD3_k127_6130581_3 - - - - 0.000000001411 66.0
SRD3_k127_6130581_5 Domain of unknown function (DUF4172) - - - 0.000009185 54.0
SRD3_k127_6133399_0 peptidase M19 K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 369.0
SRD3_k127_6133399_1 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000006449 188.0
SRD3_k127_6133399_2 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000001257 115.0
SRD3_k127_6133399_3 - - - - 0.0006973 45.0
SRD3_k127_6163715_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1668.0
SRD3_k127_6163715_1 outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 515.0
SRD3_k127_6163715_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 481.0
SRD3_k127_6163715_3 Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000007019 216.0
SRD3_k127_6163715_4 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000001025 195.0
SRD3_k127_6163715_5 Histidine kinase-like ATPase domain K01338,K04757,K06379,K08282,K17752 - 2.7.11.1,3.4.21.53 0.0000000000000000000000000000000000000000000002759 184.0
SRD3_k127_6163715_6 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000002982 155.0
SRD3_k127_6170028_0 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006171 527.0
SRD3_k127_6170028_1 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004137 483.0
SRD3_k127_6170028_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 383.0
SRD3_k127_6170028_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000000000009832 158.0
SRD3_k127_6170028_4 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000000115 115.0
SRD3_k127_6170028_5 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000003485 100.0
SRD3_k127_6170028_6 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.0000000000001022 73.0
SRD3_k127_6173440_0 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004433 321.0
SRD3_k127_6173440_1 Sporulation and spore germination - - - 0.000000000000003498 79.0
SRD3_k127_6239493_0 Short-chain dehydrogenase reductase SDR K00034,K00046,K00059 - 1.1.1.100,1.1.1.47,1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 307.0
SRD3_k127_6239493_1 Major facilitator Superfamily K08152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 315.0
SRD3_k127_6239493_2 Dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000726 308.0
SRD3_k127_6239493_3 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001001 240.0
SRD3_k127_6239493_4 2-keto-4-pentenoate hydratase - - - 0.000000000000000000000000000000000000000000000000002144 194.0
SRD3_k127_6239493_5 Bacterial protein of unknown function (DUF885) - - - 0.000134 54.0
SRD3_k127_6257020_0 Tetratricopeptide repeat - - - 1.143e-208 689.0
SRD3_k127_6257020_1 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 536.0
SRD3_k127_6257020_11 Cyclin-dependent kinase inhibitor 3 (CDKN3) - - - 0.0000000000000000000000000000000000000000007047 166.0
SRD3_k127_6257020_12 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000003478 155.0
SRD3_k127_6257020_13 - - - - 0.0000000000000000000000000000003123 127.0
SRD3_k127_6257020_14 - - - - 0.000000000000000000000001541 108.0
SRD3_k127_6257020_2 Peptidase family S58 K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 489.0
SRD3_k127_6257020_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 443.0
SRD3_k127_6257020_4 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 419.0
SRD3_k127_6257020_5 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 350.0
SRD3_k127_6257020_6 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016832,GO:0019637,GO:0044237,GO:0071704,GO:1901135 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 308.0
SRD3_k127_6257020_7 hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005123 287.0
SRD3_k127_6257020_8 Fibronectin type 3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006008 269.0
SRD3_k127_6257020_9 - - - - 0.000000000000000000000000000000000000000000000000000003176 195.0
SRD3_k127_6326890_0 Beta-Casp domain K07576 - - 3.46e-236 737.0
SRD3_k127_6326890_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007196 518.0
SRD3_k127_6326890_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 471.0
SRD3_k127_6326890_3 acid phosphatase activity K03651 - 3.1.4.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 355.0
SRD3_k127_6326890_4 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 326.0
SRD3_k127_6326890_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 289.0
SRD3_k127_6326890_6 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000297 289.0
SRD3_k127_6326890_7 stress-induced mitochondrial fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000002417 244.0
SRD3_k127_6326890_8 Reverse transcriptase-like K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000005672 173.0
SRD3_k127_6326890_9 Thiol disulfide interchange protein K04084 - 1.8.1.8 0.0000000000000000000000000000007363 126.0
SRD3_k127_633431_0 Aminotransferase class-III K00823 - 2.6.1.19 2.658e-237 741.0
SRD3_k127_633431_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007188 485.0
SRD3_k127_633431_10 PKD domain containing protein - - - 0.000000000000000008733 97.0
SRD3_k127_633431_2 PFAM Glucose Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 375.0
SRD3_k127_633431_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007726 338.0
SRD3_k127_633431_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006762 332.0
SRD3_k127_633431_5 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 298.0
SRD3_k127_633431_6 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000002584 253.0
SRD3_k127_633431_7 protein methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000009667 195.0
SRD3_k127_633431_8 - - - - 0.000000000000000000000000000000000000000000000002687 178.0
SRD3_k127_633431_9 cheY-homologous receiver domain - - - 0.00000000000000000002127 98.0
SRD3_k127_6398252_0 Protein of unknown function, DUF255 K06888 - - 1.602e-290 907.0
SRD3_k127_6398252_1 enterobactin catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 575.0
SRD3_k127_6398252_10 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000005218 146.0
SRD3_k127_6398252_11 ACT domain protein - - - 0.0000000001559 68.0
SRD3_k127_6398252_2 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 539.0
SRD3_k127_6398252_3 MOFRL family K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 531.0
SRD3_k127_6398252_4 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 478.0
SRD3_k127_6398252_5 PFAM peptidase K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 445.0
SRD3_k127_6398252_6 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 382.0
SRD3_k127_6398252_7 - K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 298.0
SRD3_k127_6398252_8 Protein of unknown function (DUF3887) K06889 GO:0003674,GO:0003824,GO:0016787,GO:0016788,GO:0052689 - 0.000000000000000000000000000000000000000000000000000000000003136 229.0
SRD3_k127_6398252_9 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000002202 209.0
SRD3_k127_641966_0 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008311 460.0
SRD3_k127_641966_1 Pyridoxal-phosphate dependent enzyme K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 447.0
SRD3_k127_641966_2 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000000000000000000000000000000000002219 211.0
SRD3_k127_641966_3 Mov34 MPN PAD-1 - - - 0.00000000000000000000000000000000000000000000000000000001656 201.0
SRD3_k127_641966_4 - - - - 0.00000000000000000000000000000000000000000000000000000001735 203.0
SRD3_k127_641966_5 TPR repeat - - - 0.000000000000000000000000000000007097 142.0
SRD3_k127_641966_6 - - - - 0.0000000000000000000000001616 113.0
SRD3_k127_641966_7 ThiS family K03636 - - 0.0000000000000000003111 88.0
SRD3_k127_6420826_0 Elongation factor G, domain IV K02355 - - 0.0 1080.0
SRD3_k127_6420826_1 Type II/IV secretion system protein K02669 - - 1.548e-201 630.0
SRD3_k127_6420826_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005381 269.0
SRD3_k127_6454884_0 C-terminal, D2-small domain, of ClpB protein - - - 3.829e-204 642.0
SRD3_k127_6454884_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 473.0
SRD3_k127_6454884_2 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006859 427.0
SRD3_k127_6454884_3 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009727 348.0
SRD3_k127_6454884_4 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000000000000000000000000000000000000000000104 226.0
SRD3_k127_6454884_5 Putative glycosyl hydrolase domain - - - 0.000000000000000000000000000000000000000000000000008703 199.0
SRD3_k127_6454884_6 Ribosomal L32p protein family K02911 - - 0.000000000000000000000000002801 113.0
SRD3_k127_6454884_7 - - - - 0.000000003693 64.0
SRD3_k127_6454884_8 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.0001951 44.0
SRD3_k127_6496198_0 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 473.0
SRD3_k127_6496198_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002426 262.0
SRD3_k127_6496198_2 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000001975 92.0
SRD3_k127_6593734_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 597.0
SRD3_k127_6593734_1 DEAD DEAH box helicase K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 514.0
SRD3_k127_6593734_10 1,7-bisphosphate phosphatase - - - 0.00000000000000000000000000000000000000000000000000007198 192.0
SRD3_k127_6593734_11 MobA-like NTP transferase domain K15669 - 2.7.7.71 0.000000000000000000000000000000000000000000000000002164 195.0
SRD3_k127_6593734_12 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000005946 188.0
SRD3_k127_6593734_13 RNA recognition motif - - - 0.000000000000000000000000000000000000000373 152.0
SRD3_k127_6593734_14 pyridoxamine 5'-phosphate K07005 - - 0.0000000000000000000000000000000000003435 145.0
SRD3_k127_6593734_15 diguanylate cyclase activity - - - 0.000000000000000000000000000000000001302 146.0
SRD3_k127_6593734_16 AntiSigma factor - - - 0.00000000000000000000000000000000009111 143.0
SRD3_k127_6593734_17 Cold shock protein domain K03704 - - 0.0000000000000000000000000003515 115.0
SRD3_k127_6593734_18 - - - - 0.0000000000000004454 83.0
SRD3_k127_6593734_19 hyperosmotic response K04065 - - 0.00000000001902 77.0
SRD3_k127_6593734_2 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004218 490.0
SRD3_k127_6593734_3 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 474.0
SRD3_k127_6593734_4 GHMP kinases C terminal K07031 - 2.7.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008617 459.0
SRD3_k127_6593734_5 Cation efflux family K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 392.0
SRD3_k127_6593734_6 - K19693 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 376.0
SRD3_k127_6593734_7 Asp/Glu/Hydantoin racemase K01779 - 5.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003951 276.0
SRD3_k127_6593734_8 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000002506 227.0
SRD3_k127_6593734_9 DoxX - - - 0.00000000000000000000000000000000000000000000000000004165 194.0
SRD3_k127_6603696_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1275.0
SRD3_k127_6603696_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005834 569.0
SRD3_k127_6603696_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007714 558.0
SRD3_k127_6603696_3 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000005199 146.0
SRD3_k127_6603696_4 TM2 domain - - - 0.00000000000000000000000000000006068 129.0
SRD3_k127_6603696_5 antisigma factor binding - - - 0.0000000000000000003181 98.0
SRD3_k127_6610671_0 OPT oligopeptide transporter protein - - - 4.93e-307 953.0
SRD3_k127_6610671_1 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 3.619e-246 771.0
SRD3_k127_6610671_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 7.521e-229 712.0
SRD3_k127_6610671_3 - - - - 1.497e-221 696.0
SRD3_k127_6610671_4 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 584.0
SRD3_k127_6610671_5 Adenosine/AMP deaminase K01488,K18286 - 3.5.4.4,3.5.4.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 399.0
SRD3_k127_6610671_6 Thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000003111 207.0
SRD3_k127_6610671_7 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000000000000000009668 192.0
SRD3_k127_6610671_8 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000002803 160.0
SRD3_k127_6610671_9 - - - - 0.0000000000000000000003529 108.0
SRD3_k127_6616744_0 Belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 1.776e-229 719.0
SRD3_k127_6616744_1 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 1.345e-227 709.0
SRD3_k127_6616744_10 - - - - 0.00000001528 63.0
SRD3_k127_6616744_2 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 536.0
SRD3_k127_6616744_3 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005485 383.0
SRD3_k127_6616744_4 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006024 384.0
SRD3_k127_6616744_5 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 333.0
SRD3_k127_6616744_6 ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002803 278.0
SRD3_k127_6616744_7 COG0410 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002628 267.0
SRD3_k127_6616744_8 PFAM Uncharacterised BCR, COG1649 - - - 0.00000000000000000000000000000000000004 147.0
SRD3_k127_6616744_9 Zinc-binding dehydrogenase K00001,K00055 - 1.1.1.1,1.1.1.90 0.0000000000000000000000000000000001083 134.0
SRD3_k127_6620382_0 pfam abc K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 528.0
SRD3_k127_6620382_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009653 516.0
SRD3_k127_6620382_10 - - - - 0.00000000000000000000000000000000000000000000003537 174.0
SRD3_k127_6620382_11 Domain of unknown function (DUF4424) - - - 0.0000000000000000000000000000000001617 145.0
SRD3_k127_6620382_12 response regulator, receiver - - - 0.000000000000000000000003087 109.0
SRD3_k127_6620382_13 - - - - 0.000000000000000000000006447 105.0
SRD3_k127_6620382_15 Tetratricopeptide repeat - - - 0.000000000001177 74.0
SRD3_k127_6620382_2 PFAM von Willebrand factor type A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 442.0
SRD3_k127_6620382_3 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006271 397.0
SRD3_k127_6620382_4 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 391.0
SRD3_k127_6620382_5 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 383.0
SRD3_k127_6620382_6 Biotin-lipoyl like K01993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 351.0
SRD3_k127_6620382_7 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009729 331.0
SRD3_k127_6620382_8 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 328.0
SRD3_k127_6620382_9 Bacterial regulatory proteins, tetR family K09017 - - 0.000000000000000000000000000000000000000000000000005793 189.0
SRD3_k127_662785_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 3.6e-313 972.0
SRD3_k127_662785_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005755 579.0
SRD3_k127_662785_10 lipid kinase activity - - - 0.000001053 54.0
SRD3_k127_662785_2 PFAM peptidase S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 447.0
SRD3_k127_662785_3 S1/P1 Nuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009409 287.0
SRD3_k127_662785_4 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000247 183.0
SRD3_k127_662785_5 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.00000000000000000000000000000000000000000009485 161.0
SRD3_k127_662785_6 IMP dehydrogenase activity - - - 0.0000000000000000000000000000633 121.0
SRD3_k127_662785_7 - - - - 0.00000000000000000000000008759 118.0
SRD3_k127_662785_8 - - - - 0.00000000000000000000001521 108.0
SRD3_k127_6641383_0 Sodium:solute symporter family - - - 4.329e-196 623.0
SRD3_k127_6641383_1 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 519.0
SRD3_k127_6641383_2 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008492 381.0
SRD3_k127_6641383_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 371.0
SRD3_k127_6641383_4 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006305 343.0
SRD3_k127_6641383_5 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000006284 234.0
SRD3_k127_6641383_6 Aminotransferase class I and II - - - 0.00000000000000000008862 89.0
SRD3_k127_6641383_7 TIGRFAM TonB K03832 - - 0.0000005483 56.0
SRD3_k127_6646405_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 6.293e-289 895.0
SRD3_k127_6646405_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 284.0
SRD3_k127_6648119_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K09181 - - 5.981e-311 968.0
SRD3_k127_6660792_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 4.312e-307 961.0
SRD3_k127_6660792_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 9.241e-202 635.0
SRD3_k127_6660792_10 - - - - 0.00000000000000000000000000000000000004751 149.0
SRD3_k127_6660792_11 PFAM Chorismate mutase, type II - - - 0.0000000000000000000000000000005811 124.0
SRD3_k127_6660792_12 helicase K03657 - 3.6.4.12 0.0000000001619 61.0
SRD3_k127_6660792_13 - - - - 0.00001006 55.0
SRD3_k127_6660792_2 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 492.0
SRD3_k127_6660792_3 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007544 368.0
SRD3_k127_6660792_4 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 327.0
SRD3_k127_6660792_5 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 304.0
SRD3_k127_6660792_6 Diacylglycerol kinase catalytic domain (presumed) - - - 0.00000000000000000000000000000000000000000000000000000000000003381 226.0
SRD3_k127_6660792_7 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity K13991 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009579,GO:0016020,GO:0034357,GO:0042716,GO:0042717,GO:0044424,GO:0044436,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000003512 190.0
SRD3_k127_6660792_8 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000006819 176.0
SRD3_k127_6660792_9 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000009651 158.0
SRD3_k127_6661293_0 Amino acid permease - - - 6.321e-298 932.0
SRD3_k127_6661293_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 8.376e-286 901.0
SRD3_k127_6661293_10 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000002627 226.0
SRD3_k127_6661293_11 PFAM CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000006482 197.0
SRD3_k127_6661293_12 - - - - 0.0000000000000000000000000000000000000000000000000000227 197.0
SRD3_k127_6661293_14 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000000007065 143.0
SRD3_k127_6661293_15 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000004217 132.0
SRD3_k127_6661293_16 - - - - 0.0000000000000000000000000000001543 129.0
SRD3_k127_6661293_18 cheY-homologous receiver domain - - - 0.00000000000000000000006807 105.0
SRD3_k127_6661293_19 protein secretion K03116 - - 0.0000000000000005877 80.0
SRD3_k127_6661293_2 TIGRFAM malto-oligosyltrehalose trehalohydrolase K01236 - 3.2.1.141 5.252e-236 743.0
SRD3_k127_6661293_20 - - - - 0.000001536 51.0
SRD3_k127_6661293_21 - - - - 0.0002281 47.0
SRD3_k127_6661293_22 COGs COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 - 3.1.1.61,3.5.1.44 0.0007807 45.0
SRD3_k127_6661293_3 ATPase domain of DNA mismatch repair MUTS family - - - 9.499e-195 624.0
SRD3_k127_6661293_4 Alcohol dehydrogenase GroES-like domain K13979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 534.0
SRD3_k127_6661293_5 Protein involved in outer membrane biogenesis K07289,K07290 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0032386,GO:0032879,GO:0032880,GO:0033157,GO:0044464,GO:0050789,GO:0051049,GO:0051223,GO:0060341,GO:0065007,GO:0070201,GO:0071944,GO:0090087,GO:0090313,GO:1903533,GO:1903827,GO:1905475 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 492.0
SRD3_k127_6661293_6 Peptidase dimerisation domain K01295 - 3.4.17.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009484 395.0
SRD3_k127_6661293_7 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 358.0
SRD3_k127_6661293_8 PFAM MCP methyltransferase, CheR-type K00575,K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004376 357.0
SRD3_k127_6661293_9 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000000000000000000000000000000000000000002361 228.0
SRD3_k127_6679015_0 GlcNAc-PI de-N-acetylase - - - 6.271e-255 815.0
SRD3_k127_6679015_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 533.0
SRD3_k127_6679015_10 - - - - 0.0000000000000000000000000000000002724 133.0
SRD3_k127_6679015_11 - - - - 0.000000000000000000000000001394 117.0
SRD3_k127_6679015_12 - - - - 0.00000000000000000003915 93.0
SRD3_k127_6679015_13 COG3634 Alkyl hydroperoxide reductase, large subunit - - - 0.00000000000261 68.0
SRD3_k127_6679015_14 - - - - 0.0000000001735 70.0
SRD3_k127_6679015_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 535.0
SRD3_k127_6679015_3 amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 507.0
SRD3_k127_6679015_4 Anion-transporting ATPase K01551 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 460.0
SRD3_k127_6679015_5 Anion-transporting ATPase K01551 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 442.0
SRD3_k127_6679015_6 carbon starvation protein CstA K06200 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 424.0
SRD3_k127_6679015_7 spore germination - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 330.0
SRD3_k127_6679015_8 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000001123 214.0
SRD3_k127_6696643_0 Involved in the tonB-independent uptake of proteins - - - 1.744e-203 662.0
SRD3_k127_6696643_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 434.0
SRD3_k127_6699157_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006467 469.0
SRD3_k127_6699157_1 Enoyl-CoA hydratase/isomerase K01715,K07537 - 4.2.1.100,4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 382.0
SRD3_k127_6699157_2 MerR, DNA binding - - - 0.000000000000000000000000000000000000000000000000000000000000009896 220.0
SRD3_k127_6699157_3 Domain of unknown function (DUF4440) - - - 0.0000000000000000003729 94.0
SRD3_k127_6705563_0 LUD domain - - - 0.0 1057.0
SRD3_k127_6705563_1 L-lactate permease K03303 - - 6.427e-237 746.0
SRD3_k127_6705563_10 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.000000000000000000000000000000000000000000000000000000000000000000009942 250.0
SRD3_k127_6705563_11 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000409 236.0
SRD3_k127_6705563_12 LUD domain K00782 - - 0.00000000000000000000000000000000000000000000000000000000000001227 220.0
SRD3_k127_6705563_13 Protein of unknown function (DUF3011) - - - 0.00000000000000000000000000000000000000000000000000000000000007904 227.0
SRD3_k127_6705563_14 Response regulator, receiver - - - 0.00000000000000000000000003794 116.0
SRD3_k127_6705563_15 cAMP biosynthetic process K12132 - 2.7.11.1 0.0000000000000000000000001537 112.0
SRD3_k127_6705563_16 - - - - 0.00000000000000000000005909 100.0
SRD3_k127_6705563_17 - - - - 0.000000000000000000001155 109.0
SRD3_k127_6705563_18 Protein of unknown function (DUF3011) - - - 0.0000000004287 71.0
SRD3_k127_6705563_19 PFAM cytochrome c class III - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000005084 54.0
SRD3_k127_6705563_2 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006649 407.0
SRD3_k127_6705563_20 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000987 48.0
SRD3_k127_6705563_3 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 400.0
SRD3_k127_6705563_4 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 381.0
SRD3_k127_6705563_5 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 355.0
SRD3_k127_6705563_6 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 323.0
SRD3_k127_6705563_7 TIGRFAM geranylgeranyl reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 317.0
SRD3_k127_6705563_8 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000284 285.0
SRD3_k127_6705563_9 Belongs to the TrpC family K01609 - 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001671 277.0
SRD3_k127_6709425_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 8.815e-221 714.0
SRD3_k127_6709425_1 Peptidase M48 K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007407 456.0
SRD3_k127_6709425_2 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 392.0
SRD3_k127_6709425_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 295.0
SRD3_k127_6709425_4 - - - - 0.00000000000000000000000007768 112.0
SRD3_k127_6709425_7 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000001358 61.0
SRD3_k127_6709425_8 - - - - 0.00001553 55.0
SRD3_k127_6720385_0 tryptophan synthase activity K01696,K06001 - 4.2.1.20 7.393e-214 673.0
SRD3_k127_6720385_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 507.0
SRD3_k127_6720385_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000001379 228.0
SRD3_k127_6720385_3 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000000000002255 181.0
SRD3_k127_6720385_5 thiamine biosynthesis protein ThiS K03154 - - 0.0000000000000002133 84.0
SRD3_k127_6757833_0 Belongs to the glycosyl hydrolase 57 family - - - 0.0 1081.0
SRD3_k127_6757833_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 1.34e-208 659.0
SRD3_k127_6757833_10 - - - - 0.0000000000000000000000000000000000000000001938 171.0
SRD3_k127_6757833_11 bacterial (prokaryotic) histone like domain K03530 - - 0.00000000000000000000000000000000000832 138.0
SRD3_k127_6757833_12 DinB family - - - 0.00000000000000000000006264 109.0
SRD3_k127_6757833_13 DNA replication, synthesis of RNA primer K04066 - - 0.00000000000000002054 85.0
SRD3_k127_6757833_14 Phospholipase D. Active site motifs. K06131 - - 0.0001162 50.0
SRD3_k127_6757833_2 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006034 605.0
SRD3_k127_6757833_3 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 525.0
SRD3_k127_6757833_4 PFAM natural resistance-associated macrophage protein K03322 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009107 519.0
SRD3_k127_6757833_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007603 512.0
SRD3_k127_6757833_6 excinuclease ABC activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007422 496.0
SRD3_k127_6757833_7 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 331.0
SRD3_k127_6757833_8 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000002391 233.0
SRD3_k127_6757833_9 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000006099 226.0
SRD3_k127_6769129_0 SpoIVB peptidase S55 - - - 3.986e-269 842.0
SRD3_k127_6769129_1 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 419.0
SRD3_k127_6769129_2 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001978 280.0
SRD3_k127_6769129_3 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000001048 237.0
SRD3_k127_6769129_4 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000407 145.0
SRD3_k127_6769129_5 Bacterial protein of unknown function (DUF937) - - - 0.000000000000000000000000000000001288 134.0
SRD3_k127_6769129_6 Transglycosylase associated protein - - - 0.000000000000000000000000003736 115.0
SRD3_k127_6792969_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 449.0
SRD3_k127_6793032_0 HELICc2 K03722 - 3.6.4.12 4.601e-270 842.0
SRD3_k127_6800990_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370,K17050 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009898,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0031235,GO:0032991,GO:0042126,GO:0043436,GO:0043546,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0097159,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098803,GO:1901363,GO:1902494,GO:1990204,GO:2001057 1.7.5.1 0.0 1789.0
SRD3_k127_6800990_1 AcrB/AcrD/AcrF family - - - 0.0 1377.0
SRD3_k127_6800990_10 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001498 254.0
SRD3_k127_6800990_11 Belongs to the UPF0502 family K09915 - - 0.0000000000000000000000000000000000000000000000000000000000001008 219.0
SRD3_k127_6800990_12 TIGRFAM respiratory nitrate reductase, gamma subunit K00374 - 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000009309 209.0
SRD3_k127_6800990_13 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000004051 195.0
SRD3_k127_6800990_14 cytochrome C - - - 0.0000000000000000000000000000000000000000000000002137 184.0
SRD3_k127_6800990_15 2 iron, 2 sulfur cluster binding K13643 - - 0.0000000000000000000000001064 114.0
SRD3_k127_6800990_16 Protein of unknown function (DUF2892) - - - 0.000000000000000000000003027 103.0
SRD3_k127_6800990_17 chaperone-mediated protein complex assembly K00373,K17052 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016530,GO:0022607,GO:0034622,GO:0042126,GO:0042128,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0051131,GO:0065003,GO:0071704,GO:0071840,GO:0071941,GO:0140104,GO:2001057 - 0.00000000000000000000003345 107.0
SRD3_k127_6800990_18 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000003829 61.0
SRD3_k127_6800990_19 - - - - 0.00000004942 60.0
SRD3_k127_6800990_2 5TM C-terminal transporter carbon starvation CstA K06200 - - 4.677e-282 881.0
SRD3_k127_6800990_3 Histidine kinase internal region K02478,K07704 - 2.7.13.3 5.729e-223 704.0
SRD3_k127_6800990_4 nitrate reductase beta subunit K00371 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008940,GO:0009055,GO:0009061,GO:0009325,GO:0009898,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016661,GO:0019645,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0031235,GO:0032991,GO:0033554,GO:0042126,GO:0043436,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0044799,GO:0045333,GO:0048037,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204,GO:2001057 1.7.5.1 2.048e-222 699.0
SRD3_k127_6800990_5 response regulator K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006767 298.0
SRD3_k127_6800990_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 290.0
SRD3_k127_6800990_7 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004954 290.0
SRD3_k127_6800990_8 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006635 279.0
SRD3_k127_6800990_9 AntiSigma factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003528 256.0
SRD3_k127_6800999_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1223.0
SRD3_k127_6800999_1 nitrite transmembrane transporter activity - - - 0.0 1036.0
SRD3_k127_6800999_10 Peptidase M16 inactive domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008667 277.0
SRD3_k127_6800999_11 collagen metabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001189 268.0
SRD3_k127_6800999_12 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000005741 217.0
SRD3_k127_6800999_13 PFAM blue (type 1) copper domain protein - - - 0.00000000000000002776 93.0
SRD3_k127_6800999_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.819e-263 819.0
SRD3_k127_6800999_3 Endothelin-converting enzyme K01415,K07386 - 3.4.24.71 9.581e-248 782.0
SRD3_k127_6800999_4 Pro-kumamolisin, activation domain K08677 - - 1.939e-201 656.0
SRD3_k127_6800999_5 Domain of unknown function (DUF4070) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009698 563.0
SRD3_k127_6800999_6 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009654 493.0
SRD3_k127_6800999_7 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 334.0
SRD3_k127_6800999_8 PFAM Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004109 334.0
SRD3_k127_6800999_9 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003953 269.0
SRD3_k127_6833361_0 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 569.0
SRD3_k127_6833361_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 565.0
SRD3_k127_6833361_10 PspA/IM30 family K03969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000023 248.0
SRD3_k127_6833361_11 Putative adhesin - - - 0.000000000000000000000000000000000000000000000000000000102 209.0
SRD3_k127_6833361_12 Cysteine-rich secretory protein family - - - 0.000000000000000000000000000000000000000000000000005494 191.0
SRD3_k127_6833361_13 Flotillin K07192 - - 0.000000000000000000000000000000000000000001067 158.0
SRD3_k127_6833361_14 - - - - 0.0000000000000000000000000000000175 128.0
SRD3_k127_6833361_15 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette - - - 0.00000000000000000000000002241 118.0
SRD3_k127_6833361_16 Flotillin K07192 - - 0.0000000000006844 68.0
SRD3_k127_6833361_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008921 505.0
SRD3_k127_6833361_3 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 494.0
SRD3_k127_6833361_4 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 484.0
SRD3_k127_6833361_5 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 447.0
SRD3_k127_6833361_6 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 344.0
SRD3_k127_6833361_7 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 331.0
SRD3_k127_6833361_8 response regulator, receiver K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008182 310.0
SRD3_k127_6833361_9 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001508 259.0
SRD3_k127_6836635_0 CoA binding domain K09181 - - 2.262e-292 907.0
SRD3_k127_6836635_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 3.29e-202 636.0
SRD3_k127_6836635_2 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 511.0
SRD3_k127_6839539_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 4.453e-240 750.0
SRD3_k127_6839539_1 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 387.0
SRD3_k127_6839539_2 PFAM deoxyribose-phosphate aldolase phospho-2-dehydro-3-deoxyheptonate aldolase K01635 - 4.1.2.40 0.00000000000000000000000000000000000000000000000000000000000000006949 225.0
SRD3_k127_6839539_3 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000001096 184.0
SRD3_k127_6862646_0 PFAM peptidase - - - 2.249e-241 755.0
SRD3_k127_6862646_1 Ftsk_gamma K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 502.0
SRD3_k127_6862646_2 PFAM FAD dependent oxidoreductase K03153 - 1.4.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 359.0
SRD3_k127_6862646_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 310.0
SRD3_k127_6862646_4 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 0.000000000724 63.0
SRD3_k127_6905799_0 Mitochondrial small ribosomal subunit Rsm22 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000661 323.0
SRD3_k127_6905799_1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 300.0
SRD3_k127_6905799_2 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.0000000000000000000000000000000000000000000000000000009749 194.0
SRD3_k127_6905799_3 DNA-binding transcription factor activity - - - 0.00000000000000000000000000000000000000000000000000246 194.0
SRD3_k127_6905799_4 Small Multidrug Resistance protein K03297 - - 0.00000000000000000001689 95.0
SRD3_k127_6905799_5 BetI-type transcriptional repressor, C-terminal - - - 0.00000000003738 73.0
SRD3_k127_6945332_0 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 455.0
SRD3_k127_6945332_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006074 445.0
SRD3_k127_6945332_2 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 400.0
SRD3_k127_6945332_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 363.0
SRD3_k127_6949946_0 Sortilin, neurotensin receptor 3, - - - 0.0 1067.0
SRD3_k127_6953526_0 DJ-1/PfpI family K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 306.0
SRD3_k127_6953526_1 XdhC and CoxI family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001595 258.0
SRD3_k127_6953526_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K11177 - 1.17.1.4 0.0000000000000000000000000000000000000003589 150.0
SRD3_k127_7023003_0 Carboxypeptidase regulatory-like domain - - - 0.0 1053.0
SRD3_k127_7023003_1 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.0 1032.0
SRD3_k127_7023003_2 tail specific protease K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 539.0
SRD3_k127_7023003_3 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 468.0
SRD3_k127_7023003_4 polysaccharide deacetylase K22278 - 3.5.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000004877 261.0
SRD3_k127_7023003_5 Transposase (IS116 IS110 IS902 family) - - - 0.00000000000000000000000000000000000000000000000000000000000000001257 243.0
SRD3_k127_7023003_6 - - - - 0.0000000000000000000000002278 117.0
SRD3_k127_7023003_7 Gaf domain K03832 - - 0.0000000000001669 81.0
SRD3_k127_7032280_0 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.000000000000000000000000000000000000000000000000000000000000008568 220.0
SRD3_k127_7032280_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000001521 184.0
SRD3_k127_7032280_2 PA domain - - - 0.0000000000000000008793 91.0
SRD3_k127_7032280_3 PBS lyase HEAT domain protein repeat-containing protein - - - 0.00000000000001141 83.0
SRD3_k127_7040650_0 glutamine synthetase K01915 - 6.3.1.2 5.023e-257 797.0
SRD3_k127_7040650_1 Trypsin K04771 - 3.4.21.107 1.117e-207 658.0
SRD3_k127_7040650_10 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004316 370.0
SRD3_k127_7040650_11 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 346.0
SRD3_k127_7040650_12 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 323.0
SRD3_k127_7040650_13 aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 316.0
SRD3_k127_7040650_14 glycine decarboxylation via glycine cleavage system K02437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001464 272.0
SRD3_k127_7040650_15 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004337 253.0
SRD3_k127_7040650_16 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000007647 235.0
SRD3_k127_7040650_17 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000003595 200.0
SRD3_k127_7040650_18 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000008823 166.0
SRD3_k127_7040650_19 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000006741 166.0
SRD3_k127_7040650_2 FecR protein - - - 3.919e-207 673.0
SRD3_k127_7040650_20 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000009812 141.0
SRD3_k127_7040650_21 Putative peptidoglycan binding domain - - - 0.000000000000000000000000004534 117.0
SRD3_k127_7040650_22 Belongs to the 'phage' integrase family. XerC subfamily K04763 - - 0.00000000001017 64.0
SRD3_k127_7040650_23 - - - - 0.00000001154 66.0
SRD3_k127_7040650_24 Lactonase, 7-bladed beta-propeller - - - 0.0006186 51.0
SRD3_k127_7040650_3 Response regulator receiver K07714 - - 1.192e-201 638.0
SRD3_k127_7040650_4 Voltage gated chloride channel K03281 - - 5.454e-199 637.0
SRD3_k127_7040650_5 Di-haem cytochrome c peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000781 500.0
SRD3_k127_7040650_6 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 455.0
SRD3_k127_7040650_7 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007571 441.0
SRD3_k127_7040650_8 pfam abc K01990,K19340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 434.0
SRD3_k127_7040650_9 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005259 439.0
SRD3_k127_7133301_0 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008128 452.0
SRD3_k127_7133301_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 389.0
SRD3_k127_7133301_2 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K07443 - - 0.00000000000000000000000000007933 119.0
SRD3_k127_7133301_3 Universal stress protein - - - 0.000000000000000000001734 105.0
SRD3_k127_7143259_0 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 1.498e-274 857.0
SRD3_k127_7143259_1 Thiolase, C-terminal domain K00632 - 2.3.1.16 1.171e-207 650.0
SRD3_k127_7143259_2 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000002832 171.0
SRD3_k127_7143259_3 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000342 71.0
SRD3_k127_7143259_4 HicA toxin of bacterial toxin-antitoxin, - - - 0.0000001536 53.0
SRD3_k127_7170643_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008721 490.0
SRD3_k127_7170643_1 penicillin-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007856 490.0
SRD3_k127_7170643_2 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000102 218.0
SRD3_k127_7170643_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000006202 140.0
SRD3_k127_7170643_4 isomerase activity K01821 - 5.3.2.6 0.0000000000123 68.0
SRD3_k127_717676_0 TIGRFAM molybdenum cofactor synthesis K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 412.0
SRD3_k127_717676_1 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 326.0
SRD3_k127_717676_2 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 293.0
SRD3_k127_717676_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001016 269.0
SRD3_k127_717676_4 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000002264 209.0
SRD3_k127_717676_5 Ribose/Galactose Isomerase K01808,K01819,K21911 GO:0003674,GO:0003824,GO:0004751,GO:0005975,GO:0008150,GO:0008152,GO:0009056,GO:0009743,GO:0009758,GO:0009987,GO:0010033,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0042221,GO:0044238,GO:0050896,GO:0051716,GO:0070887,GO:0071310,GO:0071322,GO:0071704,GO:1901575,GO:1901700,GO:1901701 5.3.1.26,5.3.1.34,5.3.1.6 0.0000000000000000000000000000000000000000000000000000001092 199.0
SRD3_k127_717676_6 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000004677 180.0
SRD3_k127_717676_7 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000002048 79.0
SRD3_k127_717676_9 PDZ DHR GLGF domain protein - - - 0.000000000009631 78.0
SRD3_k127_720240_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0 1160.0
SRD3_k127_720240_1 Protein of unknown function (DUF1116) K01902,K02381 - 6.2.1.5 3.54e-207 653.0
SRD3_k127_720240_2 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005655 486.0
SRD3_k127_720240_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 497.0
SRD3_k127_720240_4 CoA-ligase K01902,K02381 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009361,GO:0032991,GO:0042709,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:1902494 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007821 320.0
SRD3_k127_720240_5 CO dehydrogenase flavoprotein C-terminal domain K03519,K13479 - 1.17.1.4,1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 306.0
SRD3_k127_720240_6 diguanylate cyclase activity K13069 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0052621 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000002265 236.0
SRD3_k127_720240_7 [2Fe-2S] binding domain K03518,K07302,K13483,K16879,K19186,K19819,K20172 - 1.2.5.3,1.3.99.16,1.3.99.8,1.5.99.14,1.5.99.4 0.0000000000000000000000000000000000000000000000000000000000007115 218.0
SRD3_k127_720240_8 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000001692 218.0
SRD3_k127_720240_9 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000222 107.0
SRD3_k127_7256998_0 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007407 456.0
SRD3_k127_7256998_1 TIGRFAM VWFA-related Acidobacterial domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 310.0
SRD3_k127_7285215_0 signal transduction histidine kinase - - - 1.757e-272 857.0
SRD3_k127_7285215_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 5.084e-263 818.0
SRD3_k127_7285215_2 Two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 1.051e-239 749.0
SRD3_k127_7285215_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005507 373.0
SRD3_k127_7285215_4 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 316.0
SRD3_k127_7285215_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000227 275.0
SRD3_k127_7285215_6 endonuclease III - - - 0.000000000000000000000000000000000000000000000000000000000000834 218.0
SRD3_k127_7285215_7 mttA/Hcf106 family K03117 - - 0.00000000000000000244 91.0
SRD3_k127_7285215_8 - - - - 0.00000000002683 67.0
SRD3_k127_739604_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0 1473.0
SRD3_k127_739604_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 5.154e-297 920.0
SRD3_k127_739604_10 Outer membrane lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009687 318.0
SRD3_k127_739604_11 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 300.0
SRD3_k127_739604_12 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 296.0
SRD3_k127_739604_13 Protein phosphatase 2C K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 291.0
SRD3_k127_739604_14 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000001967 255.0
SRD3_k127_739604_15 TonB C terminal K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000003801 231.0
SRD3_k127_739604_16 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000000002429 215.0
SRD3_k127_739604_17 - - - - 0.000000000000000000000000000000000000000000000000000000000000547 214.0
SRD3_k127_739604_18 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.000000000000000000000000000000000000000000000000000000000007811 211.0
SRD3_k127_739604_19 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000000000000000000000002133 193.0
SRD3_k127_739604_2 WD40-like Beta Propeller K03641 - - 1.423e-195 617.0
SRD3_k127_739604_3 Belongs to the tRNA nucleotidyltransferase poly(A) polymerase family - - - 2.193e-195 622.0
SRD3_k127_739604_4 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 533.0
SRD3_k127_739604_5 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 471.0
SRD3_k127_739604_6 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 466.0
SRD3_k127_739604_7 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005027 429.0
SRD3_k127_739604_8 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 406.0
SRD3_k127_739604_9 MotA TolQ ExbB proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008435 328.0
SRD3_k127_745066_0 thought to play an important role in the mineralization of sulfates catalytic activity a phenol sulfate H2O a phenol sulfate K01130 GO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004065,GO:0004098,GO:0005488,GO:0005509,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005783,GO:0005788,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006687,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008150,GO:0008152,GO:0008484,GO:0009987,GO:0012505,GO:0016192,GO:0016787,GO:0016788,GO:0030141,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0034774,GO:0035578,GO:0036230,GO:0042119,GO:0042582,GO:0043167,GO:0043169,GO:0043202,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044237,GO:0044238,GO:0044255,GO:0044422,GO:0044424,GO:0044432,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046872,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0071704,GO:0097708,GO:0099503,GO:1901135,GO:1901564,GO:1903509 3.1.6.1 0.0 1081.0
SRD3_k127_745066_1 Protein of unknown function (DUF1800) - - - 1.84e-218 698.0
SRD3_k127_745066_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002324 298.0
SRD3_k127_745066_11 Radical SAM superfamily K06871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006914 254.0
SRD3_k127_745066_12 nickel cation binding K04651 - - 0.000000000000000000000001316 106.0
SRD3_k127_745066_13 Transposase is116 is110 is902 family - - - 0.000000001166 67.0
SRD3_k127_745066_2 TonB-dependent receptor K02014 - - 4.394e-204 659.0
SRD3_k127_745066_3 Protein of unknown function (DUF1501) - - - 2.601e-196 621.0
SRD3_k127_745066_4 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 475.0
SRD3_k127_745066_5 Alpha/beta hydrolase family K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 444.0
SRD3_k127_745066_6 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 409.0
SRD3_k127_745066_7 NADH ubiquinone oxidoreductase, 20 Kd subunit K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007317 336.0
SRD3_k127_745066_8 glycolate biosynthetic process K01560,K07025 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 334.0
SRD3_k127_745066_9 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 312.0
SRD3_k127_79065_0 Acyl transferase domain - - - 0.0 3031.0
SRD3_k127_79065_1 4Fe-4S dicluster domain - - - 2.521e-279 878.0
SRD3_k127_79065_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 2.283e-267 835.0
SRD3_k127_79065_3 fatty acid beta-oxidation using acyl-CoA dehydrogenase K00248,K03522 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006575,GO:0006577,GO:0006579,GO:0006629,GO:0006631,GO:0006635,GO:0006807,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009437,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0034641,GO:0036094,GO:0042219,GO:0042413,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044270,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:0097164,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 445.0
SRD3_k127_79065_4 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 407.0
SRD3_k127_79065_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000003172 212.0
SRD3_k127_819998_0 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 600.0
SRD3_k127_819998_1 Asparaginase K13051 - 3.4.19.5 0.000000000000000000000003106 103.0
SRD3_k127_82157_0 ATP-dependent helicase HrpB K03579 - 3.6.4.13 0.0 1092.0
SRD3_k127_82157_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.636e-260 807.0
SRD3_k127_82157_10 - - - - 0.00000000000000000005365 91.0
SRD3_k127_82157_2 ABC transporter K15738 - - 2.496e-254 799.0
SRD3_k127_82157_3 CarboxypepD_reg-like domain - - - 1.006e-249 791.0
SRD3_k127_82157_4 AMP-binding enzyme K01897 - 6.2.1.3 1.308e-208 664.0
SRD3_k127_82157_5 PFAM 2-nitropropane dioxygenase NPD K00459,K02371 - 1.13.12.16,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004329 479.0
SRD3_k127_82157_6 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 454.0
SRD3_k127_82157_7 DNA/RNA non-specific endonuclease K01173 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 372.0
SRD3_k127_82157_8 - - - - 0.00000000000000000000000000000000000007494 151.0
SRD3_k127_82157_9 Chalcone isomerase-like - - - 0.0000000000000000000000000000000000006327 145.0
SRD3_k127_893288_0 SMART Elongator protein 3 MiaB NifB - - - 1.537e-246 769.0
SRD3_k127_893288_1 Nucleic acid binding K03698 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 460.0
SRD3_k127_893288_2 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000001347 218.0
SRD3_k127_893288_3 - - - - 0.00000000000003252 81.0
SRD3_k127_946_0 Glycogen debranching enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 511.0
SRD3_k127_946_1 Belongs to the GPI family K01810 - 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 360.0
SRD3_k127_946_2 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006551 338.0
SRD3_k127_946_3 Glycosyltransferase like family 2 K10012,K20534 - 2.4.2.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 302.0
SRD3_k127_946_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001116 273.0
SRD3_k127_946_5 - - - - 0.000000000000000000000000000000000000000000000000000001663 199.0
SRD3_k127_946_6 Protein of unknown function (DUF1440) - - - 0.000000000006898 74.0
SRD3_k127_975768_0 Peptidase family M1 domain - - - 1.505e-277 869.0
SRD3_k127_975768_1 ABC transporter, transmembrane K18890 - - 3.986e-209 658.0
SRD3_k127_975768_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009191 439.0
SRD3_k127_975768_3 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 302.0
SRD3_k127_986123_0 Prephenate dehydratase K04518 - 4.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 308.0
SRD3_k127_986123_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000006855 245.0
SRD3_k127_986123_2 PFAM Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002321 231.0
SRD3_k127_987032_0 TIGRFAM Carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 2.974e-201 631.0
SRD3_k127_987032_1 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 580.0
SRD3_k127_987032_10 Protein of unknown function with PCYCGC motif - - - 0.000000000000000000000000000000000000001438 153.0
SRD3_k127_987032_11 tetrahydrobiopterin metabolic process K01724 - 4.2.1.96 0.00000000000000000005051 93.0
SRD3_k127_987032_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 567.0
SRD3_k127_987032_3 Required for morphogenesis under gluconeogenic growth conditions - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 377.0
SRD3_k127_987032_4 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000001179 253.0
SRD3_k127_987032_5 TIGRFAM carbamoyl-phosphate synthase, large subunit K01955 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000001994 249.0
SRD3_k127_987032_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000002958 207.0
SRD3_k127_987032_9 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000005263 162.0
SRD3_k127_992055_0 Protein of unknown function (DUF1009) K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 419.0
SRD3_k127_992055_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 397.0
SRD3_k127_992055_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 381.0
SRD3_k127_992055_3 TonB C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000004787 239.0
SRD3_k127_992055_4 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000001096 188.0
SRD3_k127_992055_5 DinB superfamily - - - 0.0000000000000000000000000000000001376 139.0
SRD3_k127_992055_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000001571 99.0
SRD3_k127_992055_7 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000002296 60.0
SRD3_k127_992055_8 - - - - 0.0000005519 57.0