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Overview

ID MAG03592
Name SRD3_bin.32
Sample SMP0090
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family Casimicrobiaceae
Genus VBCG01
Species VBCG01 sp035718935
Assembly information
Completeness (%) 88.51
Contamination (%) 0.0
GC content (%) 68.0
N50 (bp) 26,740
Genome size (bp) 3,524,009

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3288

Gene name Description KEGG GOs EC E-value Score Sequence
SRD3_k127_100958_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1167.0
SRD3_k127_100958_1 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 453.0
SRD3_k127_100958_2 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 451.0
SRD3_k127_100958_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 401.0
SRD3_k127_100958_4 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 388.0
SRD3_k127_100958_5 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 289.0
SRD3_k127_100958_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002273 289.0
SRD3_k127_100958_7 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000002253 259.0
SRD3_k127_100958_8 COG1538 Outer membrane protein K12340 - - 0.0000000000000000000000002639 112.0
SRD3_k127_100958_9 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000727 61.0
SRD3_k127_1048326_0 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 509.0
SRD3_k127_1048326_1 methionine synthase K00544,K00548 - 2.1.1.13,2.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 492.0
SRD3_k127_1048326_10 BrnA antitoxin of type II toxin-antitoxin system - - - 0.00001261 49.0
SRD3_k127_1048326_11 MmgE PrpD family protein - - - 0.000488 48.0
SRD3_k127_1048326_2 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 487.0
SRD3_k127_1048326_3 Glycine betaine ABC transporter substrate-binding protein K05845 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 424.0
SRD3_k127_1048326_4 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 327.0
SRD3_k127_1048326_5 glycine betaine K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008589 319.0
SRD3_k127_1048326_6 Carbon-nitrogen hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 325.0
SRD3_k127_1048326_7 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K21826 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 308.0
SRD3_k127_1048326_8 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000009155 235.0
SRD3_k127_1048326_9 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000000004591 89.0
SRD3_k127_1076408_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 2.098e-258 807.0
SRD3_k127_1076408_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006955 439.0
SRD3_k127_1076408_2 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008092 268.0
SRD3_k127_1076408_3 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000008736 263.0
SRD3_k127_1076408_4 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000002053 207.0
SRD3_k127_1076408_5 Protein of unknown function (DUF3014) - - - 0.000000000000000000000000000000000000000000000000000023 200.0
SRD3_k127_1076408_6 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000001151 159.0
SRD3_k127_1076408_7 Protein of unknown function (DUF3365) - - - 0.0006717 49.0
SRD3_k127_1082272_0 4-hydroxybenzoate K00481,K05712 GO:0000166,GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016705,GO:0016709,GO:0018659,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 1.14.13.127,1.14.13.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 573.0
SRD3_k127_1082272_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 459.0
SRD3_k127_1082272_10 4'-phosphopantetheinyl transferase superfamily K06133 - - 0.00000000000000000000133 109.0
SRD3_k127_1082272_11 - - - - 0.000000000000004571 86.0
SRD3_k127_1082272_12 Acid phosphatase homologues - - - 0.00000000000005972 77.0
SRD3_k127_1082272_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 454.0
SRD3_k127_1082272_3 Belongs to the HpcH HpaI aldolase family K01644,K08691 - 4.1.3.24,4.1.3.25,4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 287.0
SRD3_k127_1082272_4 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000001925 265.0
SRD3_k127_1082272_5 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000132 233.0
SRD3_k127_1082272_6 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000005708 161.0
SRD3_k127_1082272_7 Acid phosphatase homologues - - - 0.0000000000000000000000000000000000002648 146.0
SRD3_k127_1082272_8 AAA domain - - - 0.000000000000000000000000000000003291 134.0
SRD3_k127_1082272_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000001377 130.0
SRD3_k127_1096022_0 Extracellular liganD-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008128 442.0
SRD3_k127_1096022_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 369.0
SRD3_k127_1096022_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 342.0
SRD3_k127_1096022_3 ABC transporter ATP-binding protein K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004238 337.0
SRD3_k127_1096022_4 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 332.0
SRD3_k127_1096022_5 amino acid K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 289.0
SRD3_k127_1139187_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 7.302e-284 888.0
SRD3_k127_1139187_1 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 5.23e-266 832.0
SRD3_k127_1139187_10 Cytochrome c K17223 - - 0.00000000000000000000000000000000000000000000000000000000000000000005997 237.0
SRD3_k127_1139187_11 Sulfur oxidation protein SoxY K17226 - - 0.000000000000000000000000000000000000000000000000007575 188.0
SRD3_k127_1139187_12 FR47-like protein - - - 0.00000000000000000000000000000000000000000000004851 182.0
SRD3_k127_1139187_13 oxidation protein K17227 - - 0.000000000000000000000000000000000000000002038 157.0
SRD3_k127_1139187_14 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000005081 149.0
SRD3_k127_1139187_15 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000000000001836 135.0
SRD3_k127_1139187_17 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0000226,GO:0001817,GO:0001819,GO:0001906,GO:0001907,GO:0002376,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004365,GO:0004857,GO:0004866,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005811,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006417,GO:0006464,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007017,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009607,GO:0009620,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009987,GO:0010033,GO:0010466,GO:0010468,GO:0010506,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010941,GO:0010942,GO:0010951,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016241,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016769,GO:0016903,GO:0017014,GO:0017144,GO:0017148,GO:0018119,GO:0018130,GO:0018193,GO:0018198,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019730,GO:0019752,GO:0019828,GO:0019904,GO:0030162,GO:0030234,GO:0030414,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031341,GO:0031343,GO:0031640,GO:0031647,GO:0031965,GO:0031967,GO:0031975,GO:0032268,GO:0032269,GO:0032787,GO:0032879,GO:0032880,GO:0032991,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035605,GO:0035606,GO:0035821,GO:0036094,GO:0036211,GO:0042221,GO:0042802,GO:0042866,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043436,GO:0043891,GO:0043900,GO:0043902,GO:0043903,GO:0044003,GO:0044004,GO:0044068,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044364,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044531,GO:0044532,GO:0044533,GO:0045087,GO:0045861,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050662,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050832,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051287,GO:0051336,GO:0051346,GO:0051402,GO:0051701,GO:0051702,GO:0051704,GO:0051707,GO:0051709,GO:0051712,GO:0051716,GO:0051817,GO:0051818,GO:0051851,GO:0051852,GO:0051873,GO:0051883,GO:0052040,GO:0052042,GO:0052248,GO:0052330,GO:0052433,GO:0052501,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061134,GO:0061135,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0061844,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070887,GO:0070997,GO:0071310,GO:0071345,GO:0071346,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090407,GO:0097159,GO:0097452,GO:0097718,GO:0098542,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:1990904,GO:2000112,GO:2000113 1.2.1.12 0.0008146 43.0
SRD3_k127_1139187_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 1.449e-205 655.0
SRD3_k127_1139187_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 579.0
SRD3_k127_1139187_4 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006799 552.0
SRD3_k127_1139187_5 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 511.0
SRD3_k127_1139187_6 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 370.0
SRD3_k127_1139187_7 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 341.0
SRD3_k127_1139187_8 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 340.0
SRD3_k127_1139187_9 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 316.0
SRD3_k127_1202743_0 pfam abc K09691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000409 441.0
SRD3_k127_1202743_1 Bacterial sugar transferase K03606 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 430.0
SRD3_k127_1202743_10 Kdo2-lipid A biosynthetic process - - - 0.000000000000000000000000000000000000000000000008798 185.0
SRD3_k127_1202743_11 Glycosyl transferases group 1 K12994 - 2.4.1.349 0.0000000000000000000000000000000000000000000007813 176.0
SRD3_k127_1202743_12 - - - - 0.0000000000000000000000000000000000000000006756 173.0
SRD3_k127_1202743_13 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.00000000000000000000000000002314 131.0
SRD3_k127_1202743_14 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000002051 87.0
SRD3_k127_1202743_15 - - - - 0.00000000004771 70.0
SRD3_k127_1202743_2 Glycosyl transferase, group 1 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 387.0
SRD3_k127_1202743_3 PFAM Tetratricopeptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 345.0
SRD3_k127_1202743_4 glycosyl transferase family 2 K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006484 293.0
SRD3_k127_1202743_5 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000002978 258.0
SRD3_k127_1202743_6 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000001998 222.0
SRD3_k127_1202743_7 ABC-2 type transporter K09690 - - 0.00000000000000000000000000000000000000000000000000000000006506 216.0
SRD3_k127_1202743_8 - - - - 0.00000000000000000000000000000000000000000000000000000001205 224.0
SRD3_k127_1202743_9 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000001219 194.0
SRD3_k127_1222652_0 Dehydrogenase K00382 - 1.8.1.4 2.088e-271 847.0
SRD3_k127_1222652_1 PFAM Cytochrome c oxidase, subunit I K02274 - 1.9.3.1 6.642e-261 814.0
SRD3_k127_1222652_10 cytochrome c oxidase (Subunit II) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 289.0
SRD3_k127_1222652_11 Cyclic nucleotide-monophosphate binding domain K21563 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 289.0
SRD3_k127_1222652_12 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 293.0
SRD3_k127_1222652_13 Dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000156 237.0
SRD3_k127_1222652_14 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000001314 222.0
SRD3_k127_1222652_15 PFAM electron transport protein SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000000000001004 222.0
SRD3_k127_1222652_16 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000000000000000000000003392 218.0
SRD3_k127_1222652_17 - - - - 0.000000000000000000000000000000000000002313 154.0
SRD3_k127_1222652_18 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000001983 113.0
SRD3_k127_1222652_19 Uncharacterized conserved protein (DUF2249) - - - 0.00000000004337 74.0
SRD3_k127_1222652_2 Cytochrome b(N-terminal)/b6/petB - - - 1.472e-236 749.0
SRD3_k127_1222652_20 - - - - 0.0000000005585 68.0
SRD3_k127_1222652_21 Cytochrome oxidase assembly protein K02259 - - 0.00002536 53.0
SRD3_k127_1222652_3 Aspartate ammonia-lyase K01744 - 4.3.1.1 5.467e-234 735.0
SRD3_k127_1222652_4 Cytochrome C and Quinol oxidase polypeptide I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006258 543.0
SRD3_k127_1222652_5 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 516.0
SRD3_k127_1222652_6 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 512.0
SRD3_k127_1222652_7 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 467.0
SRD3_k127_1222652_8 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 454.0
SRD3_k127_1222652_9 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 404.0
SRD3_k127_1235409_0 PFAM 4Fe-4S K00184,K21308 - - 0.0 1105.0
SRD3_k127_1235409_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 4.943e-279 867.0
SRD3_k127_1235409_10 Mannitol dehydrogenase K00040 - 1.1.1.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 507.0
SRD3_k127_1235409_11 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009174 460.0
SRD3_k127_1235409_12 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005119 462.0
SRD3_k127_1235409_13 Glycosyl transferase family 2 K10012 - 2.4.2.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 452.0
SRD3_k127_1235409_14 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 431.0
SRD3_k127_1235409_15 PFAM binding-protein-dependent transport systems inner membrane component K02053 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 404.0
SRD3_k127_1235409_16 PFAM glycosyl transferase family 39 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005062 406.0
SRD3_k127_1235409_17 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 372.0
SRD3_k127_1235409_18 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 374.0
SRD3_k127_1235409_19 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 390.0
SRD3_k127_1235409_2 AMP-binding enzyme C-terminal domain K00666 - - 7.352e-255 814.0
SRD3_k127_1235409_20 Formyl transferase, C-terminal domain K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000925 360.0
SRD3_k127_1235409_21 ubiquinol oxidase subunit K02297 - 1.10.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004501 368.0
SRD3_k127_1235409_22 PFAM binding-protein-dependent transport systems inner membrane component K02054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 349.0
SRD3_k127_1235409_23 Formate/nitrite transporter K21990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 336.0
SRD3_k127_1235409_24 zinc protease protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 335.0
SRD3_k127_1235409_25 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 307.0
SRD3_k127_1235409_26 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008004 316.0
SRD3_k127_1235409_27 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004396 297.0
SRD3_k127_1235409_28 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000005104 246.0
SRD3_k127_1235409_29 Adenosyltransferase K00798 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000003827 255.0
SRD3_k127_1235409_3 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 3.267e-246 788.0
SRD3_k127_1235409_30 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000000000000000000000000000000000001628 229.0
SRD3_k127_1235409_31 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000004022 222.0
SRD3_k127_1235409_32 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000723 222.0
SRD3_k127_1235409_33 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000000167 203.0
SRD3_k127_1235409_34 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000000000000000000003025 196.0
SRD3_k127_1235409_35 response to antibiotic - GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000009465 185.0
SRD3_k127_1235409_36 signal sequence binding K07152 - - 0.00000000000000000000000000000000000000000000007967 183.0
SRD3_k127_1235409_37 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000002987 170.0
SRD3_k127_1235409_38 Ribosomal protein S18 K02963 - - 0.00000000000000000000000000000000005499 136.0
SRD3_k127_1235409_39 Small Multidrug Resistance protein - - - 0.0000000000000000000000000000000009795 136.0
SRD3_k127_1235409_4 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 2.133e-234 734.0
SRD3_k127_1235409_40 Anti-sigma-K factor rskA - - - 0.00000000000000000000000000000005429 136.0
SRD3_k127_1235409_41 FR47-like protein - - - 0.000000000000000000000000000001136 128.0
SRD3_k127_1235409_42 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.0000000000000002211 82.0
SRD3_k127_1235409_43 TIGRFAM Caa(3)-type oxidase, subunit IV K02277 - 1.9.3.1 0.000000000000117 82.0
SRD3_k127_1235409_44 MORN repeat variant - - - 0.000000007981 69.0
SRD3_k127_1235409_45 - - - - 0.00000006814 63.0
SRD3_k127_1235409_5 PFAM Polysulphide reductase, NrfD K00185 - - 2.957e-215 676.0
SRD3_k127_1235409_6 Glucuronate isomerase K01812 - 5.3.1.12 2.12e-206 671.0
SRD3_k127_1235409_7 tRNA synthetases class I (C) catalytic domain K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007729 606.0
SRD3_k127_1235409_8 GDP-mannose 4,6 dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 580.0
SRD3_k127_1235409_9 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 577.0
SRD3_k127_1265235_0 ABC transporter transmembrane region K06147 - - 1.386e-253 797.0
SRD3_k127_1265235_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 4.984e-238 758.0
SRD3_k127_1265235_10 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007037 494.0
SRD3_k127_1265235_11 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 475.0
SRD3_k127_1265235_12 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 460.0
SRD3_k127_1265235_13 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 451.0
SRD3_k127_1265235_14 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004901 433.0
SRD3_k127_1265235_15 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009668 419.0
SRD3_k127_1265235_16 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 413.0
SRD3_k127_1265235_17 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 396.0
SRD3_k127_1265235_18 Protein of unknown function (DUF1615) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 399.0
SRD3_k127_1265235_19 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 367.0
SRD3_k127_1265235_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 2.942e-233 728.0
SRD3_k127_1265235_20 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 370.0
SRD3_k127_1265235_21 PFAM Endonuclease exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009403 297.0
SRD3_k127_1265235_22 N-acetyltransferase K00675 - 2.3.1.118 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 297.0
SRD3_k127_1265235_23 NADPH-dependent FMN reductase K19784 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001543 277.0
SRD3_k127_1265235_24 Belongs to the peptidase S11 family K07262 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001094 276.0
SRD3_k127_1265235_25 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000001509 276.0
SRD3_k127_1265235_26 NADH pyrophosphatase-like rudimentary NUDIX domain K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000003042 271.0
SRD3_k127_1265235_27 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000001142 249.0
SRD3_k127_1265235_28 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000000000214 215.0
SRD3_k127_1265235_29 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000001076 201.0
SRD3_k127_1265235_3 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 3.548e-225 708.0
SRD3_k127_1265235_30 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000462 191.0
SRD3_k127_1265235_31 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000000003554 178.0
SRD3_k127_1265235_32 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000000000007807 153.0
SRD3_k127_1265235_33 Metal-sensitive transcriptional repressor K21600 - - 0.0000000000000000000000000001492 118.0
SRD3_k127_1265235_34 Colicin V production K03558 - - 0.00000000000000000000000005573 113.0
SRD3_k127_1265235_35 Sporulation related domain K03749 - - 0.000000000000000002955 96.0
SRD3_k127_1265235_36 Heavy metal-associated domain protein K07213 - - 0.000000000002186 75.0
SRD3_k127_1265235_37 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000108 56.0
SRD3_k127_1265235_4 asparaginyl-tRNA synthetase K01893 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.22 8.731e-225 704.0
SRD3_k127_1265235_5 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 9.598e-209 676.0
SRD3_k127_1265235_6 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007179 563.0
SRD3_k127_1265235_7 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 551.0
SRD3_k127_1265235_8 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005778 546.0
SRD3_k127_1265235_9 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 555.0
SRD3_k127_1284748_0 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 407.0
SRD3_k127_1303671_0 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 1.9e-304 963.0
SRD3_k127_1303671_1 Binding-protein-dependent transport system inner membrane component K02011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 568.0
SRD3_k127_1303671_10 Glycine zipper 2TM domain K04062 - - 0.000074 53.0
SRD3_k127_1303671_2 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 470.0
SRD3_k127_1303671_3 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004222 396.0
SRD3_k127_1303671_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008842 360.0
SRD3_k127_1303671_5 TOBE domain K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 339.0
SRD3_k127_1303671_6 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.0000000000000000000000000000000000000000000000000000000000000009666 224.0
SRD3_k127_1303671_7 NmrA-like family K00091 - 1.1.1.219 0.000000000000000000000000004843 124.0
SRD3_k127_1303671_8 Peptidoglycan-binding domain 1 protein - - - 0.00000001193 65.0
SRD3_k127_1303671_9 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000001984 57.0
SRD3_k127_1345874_0 Vitamin B12 dependent methionine synthase activation region K00548 - 2.1.1.13 0.0 1214.0
SRD3_k127_1345874_1 Adenylyl cyclase class-3 4 guanylyl cyclase - - - 4.256e-268 872.0
SRD3_k127_1345874_10 KR domain - - - 0.0000000000000000000000000000000000000000000000002515 180.0
SRD3_k127_1345874_11 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000001445 164.0
SRD3_k127_1345874_12 Phosphopantetheine attachment site - - - 0.0000000000000000000000000000000000001359 153.0
SRD3_k127_1345874_13 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.00000000000000000000000000000006275 128.0
SRD3_k127_1345874_14 FabA-like domain - - - 0.0000000000000000000000001427 121.0
SRD3_k127_1345874_15 Zinc metalloprotease (Elastase) - - - 0.00000000004693 76.0
SRD3_k127_1345874_2 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 463.0
SRD3_k127_1345874_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00647,K09458 - 2.3.1.179,2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 472.0
SRD3_k127_1345874_4 Aspartyl/Asparaginyl beta-hydroxylase K00476,K12979 - 1.14.11.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000833 389.0
SRD3_k127_1345874_5 Beta-ketoacyl synthase, C-terminal domain K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007575 327.0
SRD3_k127_1345874_6 lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000001279 242.0
SRD3_k127_1345874_7 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000002115 229.0
SRD3_k127_1345874_8 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.000000000000000000000000000000000000000000000000000000101 205.0
SRD3_k127_1345874_9 Domain of unknown function (DUF1993) K09983 - - 0.000000000000000000000000000000000000000000000000006348 201.0
SRD3_k127_134614_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 4.533e-222 713.0
SRD3_k127_134614_1 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 4.328e-205 647.0
SRD3_k127_134614_10 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.000000000000000000000000000000000000000002839 174.0
SRD3_k127_134614_11 Beta/gamma crystallins - - - 0.0000000000000000000000000000000000009297 146.0
SRD3_k127_134614_12 - - - - 0.0000000009862 64.0
SRD3_k127_134614_13 Recombinase zinc beta ribbon domain K06400 - - 0.00000002369 57.0
SRD3_k127_134614_14 Sel1-like repeats. K07126 - - 0.0002024 51.0
SRD3_k127_134614_2 Involved in arsenical resistance. Thought to form the channel of an arsenite pump - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007603 572.0
SRD3_k127_134614_3 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 527.0
SRD3_k127_134614_4 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 471.0
SRD3_k127_134614_5 Uracil DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001232 284.0
SRD3_k127_134614_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000002859 239.0
SRD3_k127_134614_7 CoA-binding protein K06929 - - 0.0000000000000000000000000000000000000000000000000000000000000000002087 233.0
SRD3_k127_134614_8 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 0.00000000000000000000000000000000000000000000000007323 183.0
SRD3_k127_134614_9 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000001388 185.0
SRD3_k127_13539_0 secretion system protein K02453 - - 7.909e-198 645.0
SRD3_k127_13539_1 type IV-A pilus assembly ATPase PilB K02454 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 580.0
SRD3_k127_13539_2 General secretion pathway protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 337.0
SRD3_k127_13539_3 Psort location CytoplasmicMembrane, score - - - 0.000006479 57.0
SRD3_k127_1377160_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 0.0 1107.0
SRD3_k127_1377160_1 AAA domain K03582 - 3.1.11.5 0.0 1101.0
SRD3_k127_1377160_10 Bacterial periplasmic substrate-binding proteins K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 338.0
SRD3_k127_1377160_11 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005467 334.0
SRD3_k127_1377160_12 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 322.0
SRD3_k127_1377160_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006506 248.0
SRD3_k127_1377160_14 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001999 250.0
SRD3_k127_1377160_15 Aminoacyl-tRNA editing domain K19055 - - 0.0000000000000000000000000000000000000000000000000000000000002162 219.0
SRD3_k127_1377160_16 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000003323 203.0
SRD3_k127_1377160_17 Sarcosine oxidase, delta subunit family K22085 - 1.5.99.5 0.000000000000000000000000000007953 123.0
SRD3_k127_1377160_18 Transcriptional regulator, gntR family - - - 0.000000000000000001988 93.0
SRD3_k127_1377160_19 - - - - 0.00000000000000001019 86.0
SRD3_k127_1377160_2 2Fe-2S iron-sulfur cluster binding domain K22086 - 1.5.99.5 1.19e-284 906.0
SRD3_k127_1377160_3 FAD dependent oxidoreductase K22084 - 1.5.99.5 4.383e-205 646.0
SRD3_k127_1377160_4 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 614.0
SRD3_k127_1377160_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00596 - 4.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 557.0
SRD3_k127_1377160_6 FMN-dependent dehydrogenase K00101 - 1.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 539.0
SRD3_k127_1377160_7 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 372.0
SRD3_k127_1377160_8 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 362.0
SRD3_k127_1377160_9 ABC-type polar amino acid transport system ATPase component K02028,K09972 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 353.0
SRD3_k127_1379044_0 type II secretion system protein E K02454,K02504,K02652,K12276 - - 5.613e-249 781.0
SRD3_k127_1379044_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004376 584.0
SRD3_k127_1379044_10 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 348.0
SRD3_k127_1379044_11 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 363.0
SRD3_k127_1379044_12 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 334.0
SRD3_k127_1379044_13 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 329.0
SRD3_k127_1379044_14 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 331.0
SRD3_k127_1379044_15 Thiamine monophosphate synthase K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 324.0
SRD3_k127_1379044_16 Transcriptional regulator K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 310.0
SRD3_k127_1379044_17 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 306.0
SRD3_k127_1379044_18 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001258 275.0
SRD3_k127_1379044_19 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000005363 258.0
SRD3_k127_1379044_2 Type II secretion system (T2SS), protein F K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007531 505.0
SRD3_k127_1379044_20 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000000000009725 209.0
SRD3_k127_1379044_21 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.00000000000000000000000000000000000000000000000000007812 193.0
SRD3_k127_1379044_22 PFAM Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000001377 195.0
SRD3_k127_1379044_23 Dephospho-CoA kinase K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000167 183.0
SRD3_k127_1379044_24 General function prediction only - - - 0.000000000000000000000000000000000000000000000002373 179.0
SRD3_k127_1379044_25 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.000000000000000000000000000000000000000001083 158.0
SRD3_k127_1379044_26 LppC putative lipoprotein K07121 - - 0.0000000000000000000000000000000000006317 156.0
SRD3_k127_1379044_27 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000003465 127.0
SRD3_k127_1379044_28 RimM N-terminal domain K02860 - - 0.000000000000000000000000000005956 130.0
SRD3_k127_1379044_29 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000005288 111.0
SRD3_k127_1379044_3 Methionine synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 494.0
SRD3_k127_1379044_30 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000584 118.0
SRD3_k127_1379044_31 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000000000114 87.0
SRD3_k127_1379044_32 RDD family - - - 0.000000000188 75.0
SRD3_k127_1379044_4 Right handed beta helix region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 489.0
SRD3_k127_1379044_5 ArgJ family K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 477.0
SRD3_k127_1379044_6 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K03502 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 467.0
SRD3_k127_1379044_7 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 474.0
SRD3_k127_1379044_8 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 391.0
SRD3_k127_1379044_9 ATPase (AAA K06923 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 372.0
SRD3_k127_1380473_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1197.0
SRD3_k127_1380473_1 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 498.0
SRD3_k127_1380473_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 385.0
SRD3_k127_1380473_3 Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000524 223.0
SRD3_k127_1380473_4 TIR domain - - - 0.00000000000000000000000000000000000000000000000000000005024 206.0
SRD3_k127_1380473_5 Endoribonuclease L-PSP K09021 - - 0.00000000000000000000000000000000000000001052 162.0
SRD3_k127_1380473_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01153 - 3.1.21.3 0.000000000000000000000001397 110.0
SRD3_k127_1425465_0 PFAM General substrate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007763 604.0
SRD3_k127_1425465_1 Ammonium Transporter Family K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009652 565.0
SRD3_k127_1425465_2 Iron-containing alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 433.0
SRD3_k127_1425465_3 Magnesium chelatase, subunit ChlI K07391 - - 0.000000000000000000000000000000000000000000000000000000000001124 213.0
SRD3_k127_1425465_4 Belongs to the P(II) protein family K04752 - - 0.00000000000000000000000000000000000000000000000000000002834 198.0
SRD3_k127_1425465_5 Bacterial protein of unknown function (Gcw_chp) - - - 0.0000000000000000000000000000000000000000000000000000000297 216.0
SRD3_k127_1425465_6 Membrane fusogenic activity K09806 - - 0.000000000000000000004341 95.0
SRD3_k127_143111_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 7.174e-213 668.0
SRD3_k127_143111_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 466.0
SRD3_k127_143111_10 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007446 265.0
SRD3_k127_143111_11 Cytochrome C1 K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007141 263.0
SRD3_k127_143111_12 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 GO:0000105,GO:0003674,GO:0003824,GO:0004635,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000777 194.0
SRD3_k127_143111_13 Nucleotide transport and metabolism Carbohydrate transport and metabolism General function prediction only K02503 - - 0.00000000000000000000000000000000000000000000000002064 184.0
SRD3_k127_143111_14 stringent starvation protein B K03600 - - 0.0000000000000000000000000000000003394 138.0
SRD3_k127_143111_15 Phosphoribosyl-ATP K01523 - 3.6.1.31 0.00000000000000000000000000000002057 128.0
SRD3_k127_143111_16 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000000001524 116.0
SRD3_k127_143111_17 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000000000008825 108.0
SRD3_k127_143111_2 Belongs to the peptidase S1C family K04691,K04772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 414.0
SRD3_k127_143111_3 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 394.0
SRD3_k127_143111_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009167 357.0
SRD3_k127_143111_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 361.0
SRD3_k127_143111_6 Glutathione S-transferase K03599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 336.0
SRD3_k127_143111_7 Sec-independent protein translocase protein (TatC) K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 321.0
SRD3_k127_143111_8 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 311.0
SRD3_k127_143111_9 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 287.0
SRD3_k127_1531248_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 7.041e-233 750.0
SRD3_k127_1531248_1 FtsX-like permease family K02004 - - 3.286e-217 702.0
SRD3_k127_1531248_10 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000005278 139.0
SRD3_k127_1531248_2 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 575.0
SRD3_k127_1531248_3 PFAM MoeA domain protein domain I and II K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 486.0
SRD3_k127_1531248_4 Lipocalin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 385.0
SRD3_k127_1531248_5 Male sterility protein K22025 - 1.1.1.410 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 357.0
SRD3_k127_1531248_6 Pterin binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 306.0
SRD3_k127_1531248_7 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007999 253.0
SRD3_k127_1531248_8 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000001033 221.0
SRD3_k127_1531248_9 SelR domain K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000004954 209.0
SRD3_k127_154986_0 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 2.856e-244 780.0
SRD3_k127_154986_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 3.089e-242 764.0
SRD3_k127_154986_10 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000513 251.0
SRD3_k127_154986_11 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000001291 220.0
SRD3_k127_154986_12 PFAM thioesterase superfamily protein K10806 - - 0.000000000000000000000000000000000000000000000000000358 192.0
SRD3_k127_154986_13 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000000000000004432 175.0
SRD3_k127_154986_14 Tetratricopeptide repeat - - - 0.00000000000000000000000001979 111.0
SRD3_k127_154986_15 - - - - 0.0000000000000001689 93.0
SRD3_k127_154986_2 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 513.0
SRD3_k127_154986_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007841 500.0
SRD3_k127_154986_4 LysM domain K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008719 417.0
SRD3_k127_154986_5 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 378.0
SRD3_k127_154986_6 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 313.0
SRD3_k127_154986_7 D,D-heptose 1,7-bisphosphate phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002555 269.0
SRD3_k127_154986_8 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000004033 269.0
SRD3_k127_154986_9 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002258 263.0
SRD3_k127_18146_0 surface antigen K07278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 347.0
SRD3_k127_18146_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 362.0
SRD3_k127_188509_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 1.765e-207 656.0
SRD3_k127_188509_1 transposase IS116 IS110 IS902 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 428.0
SRD3_k127_188509_2 Permease, YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000087 363.0
SRD3_k127_188509_3 PFAM permease YjgP YjgQ family protein K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 318.0
SRD3_k127_188509_4 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000001321 235.0
SRD3_k127_188509_5 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000000000002514 135.0
SRD3_k127_188509_6 DNA polymerase III chi subunit, HolC - - - 0.0000000000000000000000000000001833 142.0
SRD3_k127_188509_7 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000000000004273 123.0
SRD3_k127_188509_8 Transposase (IS116 IS110 IS902 family) - - - 0.00000006776 66.0
SRD3_k127_1939369_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 8.198e-294 911.0
SRD3_k127_1939369_1 Type II IV secretion system protein K02652 - - 1.11e-210 669.0
SRD3_k127_1939369_10 Involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001423 264.0
SRD3_k127_1939369_11 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.000000000000000000000000000000000000000000000000000000000000000000000008962 247.0
SRD3_k127_1939369_12 oxidase assembly K02258 - - 0.00000000000000000000000000000000000000000000000000000000000000000002196 236.0
SRD3_k127_1939369_13 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 GO:0003674,GO:0003824,GO:0004462,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016151,GO:0016829,GO:0016846,GO:0019243,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042182,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046872,GO:0046914,GO:0051186,GO:0051596,GO:0061727,GO:0071704,GO:1901564,GO:1901575,GO:1901615 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000007534 211.0
SRD3_k127_1939369_14 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.0000000000000000000000000000000000000000000000000001155 196.0
SRD3_k127_1939369_15 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000728 181.0
SRD3_k127_1939369_16 PFAM General secretion pathway protein K K02460 - - 0.000000000000000000000000000000000000000000002388 184.0
SRD3_k127_1939369_17 PFAM type II secretion system protein G K02456 - - 0.000000000000000000000000000000000000000000003222 168.0
SRD3_k127_1939369_18 SURF1-like protein K14998 - - 0.0000000000000000000000000000000000000006157 158.0
SRD3_k127_1939369_19 fimbrial assembly K02461 - - 0.00000000000000000000000000000006696 145.0
SRD3_k127_1939369_2 Aminotransferase K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 608.0
SRD3_k127_1939369_20 General secretion pathway protein H K02457 - - 0.0000000000000000000000000000008115 133.0
SRD3_k127_1939369_21 Rubredoxin - - - 0.000000000000000000000000004425 112.0
SRD3_k127_1939369_22 signal sequence binding - - - 0.00000000000000000004617 98.0
SRD3_k127_1939369_23 Prokaryotic N-terminal methylation motif K02459 - - 0.000000000000002857 89.0
SRD3_k127_1939369_24 - - - - 0.000000000006186 74.0
SRD3_k127_1939369_25 Prokaryotic N-terminal methylation motif K02458 - - 0.0000000001497 73.0
SRD3_k127_1939369_26 General secretion pathway protein M K02462 - - 0.0000000001715 69.0
SRD3_k127_1939369_27 Protein of unknown function (DUF2909) - - - 0.0000000008566 63.0
SRD3_k127_1939369_28 Pfam:T4SC K02463 - - 0.00001619 56.0
SRD3_k127_1939369_3 Cytochrome C oxidase subunit II, transmembrane domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 434.0
SRD3_k127_1939369_4 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008286 397.0
SRD3_k127_1939369_5 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008449 385.0
SRD3_k127_1939369_6 Type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 407.0
SRD3_k127_1939369_7 COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3 K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 391.0
SRD3_k127_1939369_8 Type II secretion system K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 358.0
SRD3_k127_1939369_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 333.0
SRD3_k127_1971788_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 3.226e-269 846.0
SRD3_k127_1971788_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 3.453e-264 824.0
SRD3_k127_1971788_10 hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009622 304.0
SRD3_k127_1971788_11 NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000002707 226.0
SRD3_k127_1971788_12 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000007822 117.0
SRD3_k127_1971788_2 Proton-conducting membrane transporter - - - 1.821e-263 830.0
SRD3_k127_1971788_3 NADH Ubiquinone plastoquinone (Complex I) K12141 - - 3.232e-232 739.0
SRD3_k127_1971788_4 PFAM Orn Lys Arg decarboxylase major region K01584 - 4.1.1.19 9.621e-196 615.0
SRD3_k127_1971788_5 PFAM NADH dehydrogenase (ubiquinone) 30 kDa subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006443 554.0
SRD3_k127_1971788_6 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006796 537.0
SRD3_k127_1971788_7 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 494.0
SRD3_k127_1971788_8 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 484.0
SRD3_k127_1971788_9 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 444.0
SRD3_k127_1989078_0 Gram-negative porin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005886 479.0
SRD3_k127_1989078_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 471.0
SRD3_k127_1989078_10 TIGRFAM yecA family protein K07039 - - 0.0000000000000000000000000000000005997 139.0
SRD3_k127_1989078_11 - - - - 0.0000000000000000000000000000008555 126.0
SRD3_k127_1989078_12 PFAM 17 kDa surface antigen - - - 0.000000000000000000004443 104.0
SRD3_k127_1989078_13 Acetyltransferase (GNAT) domain - - - 0.0000001962 52.0
SRD3_k127_1989078_2 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 409.0
SRD3_k127_1989078_3 Histidine kinase K02484,K07645 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 351.0
SRD3_k127_1989078_4 histidine kinase HAMP region domain protein K07649 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 309.0
SRD3_k127_1989078_5 Fructosamine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001476 276.0
SRD3_k127_1989078_6 Transcriptional regulatory protein, C terminal K02483,K07666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005366 269.0
SRD3_k127_1989078_7 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000005403 232.0
SRD3_k127_1989078_8 Glutathione S-transferase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000008569 235.0
SRD3_k127_1989078_9 Copper chaperone PCu(A)C K09796 - - 0.00000000000000000000000000000000009238 139.0
SRD3_k127_200859_0 CobB/CobQ-like glutamine amidotransferase domain K01952 - 6.3.5.3 7.177e-296 926.0
SRD3_k127_200859_1 PFAM ABC transporter related K10004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 398.0
SRD3_k127_200859_2 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K02029,K10003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 348.0
SRD3_k127_200859_3 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K02029,K10002 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 307.0
SRD3_k127_200859_4 Bacterial periplasmic substrate-binding proteins K10001 - - 0.000000000000000000000000000000000000000000000000000000000000000002587 231.0
SRD3_k127_200993_0 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 GO:0002252,GO:0002376,GO:0003674,GO:0003824,GO:0006464,GO:0006476,GO:0006807,GO:0006935,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018205,GO:0019213,GO:0019538,GO:0033558,GO:0034979,GO:0034983,GO:0035601,GO:0036048,GO:0036049,GO:0036055,GO:0036211,GO:0040011,GO:0042221,GO:0042330,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050896,GO:0051607,GO:0051704,GO:0051707,GO:0071704,GO:0098542,GO:0098732,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000627 338.0
SRD3_k127_200993_1 methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 309.0
SRD3_k127_200993_2 Cupin domain - - - 0.000000000000000000000000000000000000000000006119 167.0
SRD3_k127_200993_3 - - - - 0.0000000000000000007206 89.0
SRD3_k127_200993_4 TspO/MBR family K05770 - - 0.000000000007473 67.0
SRD3_k127_2054531_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1036.0
SRD3_k127_2054531_1 benzoyl-CoA oxygenase K15512 - 1.14.13.208 1.125e-269 835.0
SRD3_k127_2054531_10 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 454.0
SRD3_k127_2054531_11 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 439.0
SRD3_k127_2054531_12 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008912 460.0
SRD3_k127_2054531_13 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 402.0
SRD3_k127_2054531_14 Metal binding domain of Ada K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 394.0
SRD3_k127_2054531_15 ABC-type nitrate sulfonate bicarbonate transport system, periplasmic component K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 389.0
SRD3_k127_2054531_16 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 398.0
SRD3_k127_2054531_17 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 364.0
SRD3_k127_2054531_18 Protein involved in amino acid transport K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003678 345.0
SRD3_k127_2054531_19 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 359.0
SRD3_k127_2054531_2 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 5.528e-252 802.0
SRD3_k127_2054531_20 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 332.0
SRD3_k127_2054531_21 membrane-bound metal-dependent K01993,K07038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 332.0
SRD3_k127_2054531_22 Bacterial regulatory helix-turn-helix protein, lysR family K13634 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 315.0
SRD3_k127_2054531_23 Branched-chain amino acid ATP-binding cassette transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 325.0
SRD3_k127_2054531_24 branched-chain amino acid transport system, permease component K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 325.0
SRD3_k127_2054531_25 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004014 274.0
SRD3_k127_2054531_26 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007258 263.0
SRD3_k127_2054531_27 ABC transporter, ATP-binding protein K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007078 249.0
SRD3_k127_2054531_28 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000005634 243.0
SRD3_k127_2054531_29 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000009134 255.0
SRD3_k127_2054531_3 Oxidoreductase NAD-binding domain K15511 - 1.14.13.208 5.679e-194 613.0
SRD3_k127_2054531_30 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000006885 219.0
SRD3_k127_2054531_31 branched-chain amino acid K01995 - - 0.00000000000000000000000000000000000000000000000000000000000002453 224.0
SRD3_k127_2054531_32 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000001109 220.0
SRD3_k127_2054531_33 Membrane dipeptidase (Peptidase family M19) - - - 0.0000000000000000000000000000000000000000000000000000000007083 221.0
SRD3_k127_2054531_34 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000000000002972 198.0
SRD3_k127_2054531_35 oxidation-reduction process - - - 0.000000000000000000000000000000000000000000000000003661 203.0
SRD3_k127_2054531_36 PFAM regulatory protein, MerR - - - 0.00000000000000000000000000000000000000000000000003999 182.0
SRD3_k127_2054531_37 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000007049 189.0
SRD3_k127_2054531_38 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000000000001384 169.0
SRD3_k127_2054531_39 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000004666 168.0
SRD3_k127_2054531_4 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 532.0
SRD3_k127_2054531_40 FCD - - - 0.000000000000000000000000000000000000000005368 169.0
SRD3_k127_2054531_41 Protein of unknown function (DUF1428) - - - 0.0000000000000000000000000000000000000006704 151.0
SRD3_k127_2054531_42 Nitroreductase family - - - 0.000000000000000000000000000000000003257 145.0
SRD3_k127_2054531_43 Ligand-binding protein K01999 - - 0.000000000000000000000000004965 126.0
SRD3_k127_2054531_44 Enoyl-CoA hydratase/isomerase K15513 - 4.1.2.44 0.00000000000000000000001236 99.0
SRD3_k127_2054531_45 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000000000165 102.0
SRD3_k127_2054531_46 Transcriptional regulator - - - 0.000000000000000006619 94.0
SRD3_k127_2054531_47 Histidine kinase - - - 0.00000000000001171 79.0
SRD3_k127_2054531_48 endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000001438 78.0
SRD3_k127_2054531_49 Cupin 2, conserved barrel domain protein K00450,K11948 - 1.13.11.38,1.13.11.4 0.000003592 59.0
SRD3_k127_2054531_5 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 545.0
SRD3_k127_2054531_6 Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 535.0
SRD3_k127_2054531_7 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003594 514.0
SRD3_k127_2054531_8 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 477.0
SRD3_k127_2054531_9 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 470.0
SRD3_k127_2091929_0 PFAM peptidase M3A and M3B thimet oligopeptidase F K01414 - 3.4.24.70 1.412e-267 843.0
SRD3_k127_2091929_1 Thiamine pyrophosphate enzyme, central domain - - - 3.651e-248 788.0
SRD3_k127_2091929_10 Required for the activity of the bacterial periplasmic transport system of putrescine K02055,K11069,K11073 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006448 503.0
SRD3_k127_2091929_11 MBOAT, membrane-bound O-acyltransferase family K19294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 494.0
SRD3_k127_2091929_12 Belongs to the glycosyl hydrolase 31 family K01811 GO:0003674,GO:0003824,GO:0004553,GO:0005488,GO:0005515,GO:0016787,GO:0016798,GO:0042802,GO:0080176 3.2.1.177 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 472.0
SRD3_k127_2091929_13 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 443.0
SRD3_k127_2091929_14 beta-keto acid cleavage enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007231 434.0
SRD3_k127_2091929_15 Belongs to the methyltransferase superfamily K07444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 427.0
SRD3_k127_2091929_16 Binding-protein-dependent transport system inner membrane component K02054,K11071,K11075 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 409.0
SRD3_k127_2091929_17 ABC transporter, phosphonate, periplasmic substrate-binding protein K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 419.0
SRD3_k127_2091929_18 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 414.0
SRD3_k127_2091929_19 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009575 388.0
SRD3_k127_2091929_2 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 9.262e-212 669.0
SRD3_k127_2091929_20 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 383.0
SRD3_k127_2091929_21 Binding-protein-dependent transport system inner membrane component K11070,K11074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 372.0
SRD3_k127_2091929_22 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 347.0
SRD3_k127_2091929_23 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 342.0
SRD3_k127_2091929_24 PFAM ABC-2 type transporter K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 319.0
SRD3_k127_2091929_25 Integral membrane protein TerC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 311.0
SRD3_k127_2091929_26 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007239 315.0
SRD3_k127_2091929_27 Sigma-54 interaction domain K07712 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005493 316.0
SRD3_k127_2091929_28 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 304.0
SRD3_k127_2091929_29 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006309 317.0
SRD3_k127_2091929_3 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 605.0
SRD3_k127_2091929_30 SMP-30/Gluconolaconase/LRE-like region K14274 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 300.0
SRD3_k127_2091929_31 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001944 283.0
SRD3_k127_2091929_32 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001178 274.0
SRD3_k127_2091929_33 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002258 253.0
SRD3_k127_2091929_34 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate - - - 0.000000000000000000000000000000000000000000000000000000000000000000002978 247.0
SRD3_k127_2091929_35 Nucleotidyl transferase K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000001117 256.0
SRD3_k127_2091929_36 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000001772 243.0
SRD3_k127_2091929_37 Alpha beta K07018 - - 0.000000000000000000000000000000000000000000000000000000000000000003617 233.0
SRD3_k127_2091929_38 Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000000000000000000001918 214.0
SRD3_k127_2091929_39 Aldose 1-epimerase K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000003015 222.0
SRD3_k127_2091929_4 twitching motility protein K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 611.0
SRD3_k127_2091929_40 Cytochrome c mono- and diheme variants - - - 0.0000000000000000000000000000000000000000000000000000000003743 210.0
SRD3_k127_2091929_41 AdoMet dependent proline di-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000002112 208.0
SRD3_k127_2091929_42 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000002127 215.0
SRD3_k127_2091929_43 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000000007672 185.0
SRD3_k127_2091929_44 import inner membrane translocase subunit Tim44 - - - 0.000000000000000000000000000000000000000000000000007711 192.0
SRD3_k127_2091929_45 His Kinase A (phosphoacceptor) domain K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000001461 181.0
SRD3_k127_2091929_46 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.00000000000000000000000000000000000000000001362 179.0
SRD3_k127_2091929_47 AzlC protein - - - 0.00000000000000000000000000000000000000001642 169.0
SRD3_k127_2091929_48 VanZ like family - - - 0.000000000000000000000000000000000000001089 161.0
SRD3_k127_2091929_49 Pfam Glutaredoxin - - - 0.00000000000000000000000000000005129 132.0
SRD3_k127_2091929_50 YGGT family K02221 - - 0.0000000000000000000000000000002477 141.0
SRD3_k127_2091929_51 SCP-2 sterol transfer family K03690 - - 0.0000000000000000006931 94.0
SRD3_k127_2091929_52 DUF167 K09131 - - 0.000000000000000002449 96.0
SRD3_k127_2091929_54 branched-chain amino acid - - - 0.000000006356 67.0
SRD3_k127_2091929_55 Fructosamine kinase - - - 0.000003126 53.0
SRD3_k127_2091929_6 Organic solvent tolerance protein K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 569.0
SRD3_k127_2091929_8 belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003144 543.0
SRD3_k127_2091929_9 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 513.0
SRD3_k127_2115323_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1195.0
SRD3_k127_2115323_1 DNA topoisomerase III K03169 - 5.99.1.2 0.0 1123.0
SRD3_k127_2115323_10 Dynamin family - - - 2.996e-235 745.0
SRD3_k127_2115323_11 Transport of potassium into the cell K03549 - - 2.08e-233 760.0
SRD3_k127_2115323_12 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 3.656e-210 670.0
SRD3_k127_2115323_13 Signal transduction histidine kinase - - - 2.774e-197 639.0
SRD3_k127_2115323_14 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 612.0
SRD3_k127_2115323_15 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 586.0
SRD3_k127_2115323_16 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 558.0
SRD3_k127_2115323_17 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 564.0
SRD3_k127_2115323_18 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 535.0
SRD3_k127_2115323_19 Psort location Cytoplasmic, score 7.50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004857 527.0
SRD3_k127_2115323_2 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 GO:0000003,GO:0001655,GO:0001822,GO:0001889,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004457,GO:0004611,GO:0004613,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006109,GO:0006111,GO:0006113,GO:0006139,GO:0006163,GO:0006464,GO:0006629,GO:0006631,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007028,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007610,GO:0008150,GO:0008152,GO:0008906,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009179,GO:0009185,GO:0009199,GO:0009205,GO:0009259,GO:0009410,GO:0009605,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010646,GO:0010647,GO:0010675,GO:0010906,GO:0014070,GO:0014074,GO:0015036,GO:0015980,GO:0016042,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016651,GO:0016667,GO:0016668,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018991,GO:0019098,GO:0019222,GO:0019249,GO:0019318,GO:0019319,GO:0019320,GO:0019362,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019516,GO:0019538,GO:0019541,GO:0019543,GO:0019563,GO:0019626,GO:0019637,GO:0019659,GO:0019660,GO:0019661,GO:0019666,GO:0019674,GO:0019693,GO:0019751,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023056,GO:0030145,GO:0030154,GO:0030703,GO:0030855,GO:0031323,GO:0031667,GO:0031960,GO:0031974,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032868,GO:0032869,GO:0032870,GO:0033993,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035690,GO:0036211,GO:0042221,GO:0042493,GO:0042594,GO:0042737,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043434,GO:0043436,GO:0043687,GO:0043900,GO:0043903,GO:0043949,GO:0043950,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045471,GO:0046031,GO:0046034,GO:0046164,GO:0046174,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0046434,GO:0046459,GO:0046483,GO:0046496,GO:0046677,GO:0046683,GO:0046700,GO:0046872,GO:0046914,GO:0047134,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048545,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051186,GO:0051384,GO:0051591,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0060429,GO:0061005,GO:0061008,GO:0062012,GO:0065007,GO:0070013,GO:0070365,GO:0070887,GO:0071236,GO:0071310,GO:0071361,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071548,GO:0071549,GO:0071704,GO:0071840,GO:0072001,GO:0072071,GO:0072329,GO:0072330,GO:0072521,GO:0072524,GO:0080090,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533 4.1.1.32 2.438e-300 931.0
SRD3_k127_2115323_20 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 505.0
SRD3_k127_2115323_21 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 505.0
SRD3_k127_2115323_22 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 471.0
SRD3_k127_2115323_23 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 440.0
SRD3_k127_2115323_24 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000504 452.0
SRD3_k127_2115323_25 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 426.0
SRD3_k127_2115323_26 glycosyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006506 395.0
SRD3_k127_2115323_27 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 394.0
SRD3_k127_2115323_28 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 391.0
SRD3_k127_2115323_29 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 386.0
SRD3_k127_2115323_3 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 3.613e-295 916.0
SRD3_k127_2115323_30 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 371.0
SRD3_k127_2115323_31 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 373.0
SRD3_k127_2115323_32 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000996 361.0
SRD3_k127_2115323_33 cytochrome c oxidase (Subunit II) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 361.0
SRD3_k127_2115323_34 SMART Tetratricopeptide domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 364.0
SRD3_k127_2115323_35 hydrolases of the HAD superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 340.0
SRD3_k127_2115323_36 DNA recombination-mediator protein A K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 342.0
SRD3_k127_2115323_37 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004737 327.0
SRD3_k127_2115323_38 involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008441 317.0
SRD3_k127_2115323_39 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 316.0
SRD3_k127_2115323_4 TIGRFAM PQQ-dependent dehydrogenase, methanol ethanol family - - - 2.6e-287 891.0
SRD3_k127_2115323_40 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 304.0
SRD3_k127_2115323_41 PFAM Peptidoglycan-binding LysM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 293.0
SRD3_k127_2115323_42 COG1404 Subtilisin-like serine proteases K14645 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001508 300.0
SRD3_k127_2115323_43 GHMP kinases N terminal domain K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006756 281.0
SRD3_k127_2115323_44 Redoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000002038 245.0
SRD3_k127_2115323_45 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000001166 237.0
SRD3_k127_2115323_46 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001283 250.0
SRD3_k127_2115323_47 Peptidyl-tRNA hydrolase K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000001414 229.0
SRD3_k127_2115323_48 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000000000000147 236.0
SRD3_k127_2115323_49 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000002036 233.0
SRD3_k127_2115323_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.001e-280 870.0
SRD3_k127_2115323_50 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298,K15408 - 1.10.3.10,1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000007106 229.0
SRD3_k127_2115323_51 PFAM extracellular solute-binding protein, family 3 K16254 - - 0.0000000000000000000000000000000000000000000000000000000000000298 224.0
SRD3_k127_2115323_52 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) K02351 - - 0.00000000000000000000000000000000000000000000000000000000007107 227.0
SRD3_k127_2115323_53 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000000000000000000002625 183.0
SRD3_k127_2115323_54 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000000001018 191.0
SRD3_k127_2115323_55 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.000000000000000000000000000000000000000000006083 179.0
SRD3_k127_2115323_56 Yip1 domain - - - 0.000000000000000000000000000000000000000000007758 175.0
SRD3_k127_2115323_57 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000005715 162.0
SRD3_k127_2115323_58 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.000000000000000000000000000000000000000005954 159.0
SRD3_k127_2115323_59 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000006565 152.0
SRD3_k127_2115323_6 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298,K15408 - 1.10.3.10,1.9.3.1 5.43e-270 863.0
SRD3_k127_2115323_60 methyltransferase K08316 - 2.1.1.171 0.000000000000000000000000000000000000003526 165.0
SRD3_k127_2115323_61 signal peptide protein - - - 0.0000000000000000000000000000000000001673 155.0
SRD3_k127_2115323_62 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000000433 145.0
SRD3_k127_2115323_63 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000007291 109.0
SRD3_k127_2115323_64 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.00000000000000000000001214 112.0
SRD3_k127_2115323_65 Protein of unknown function (DUF2905) - - - 0.00000000000000000338 101.0
SRD3_k127_2115323_66 ThiS family K03636 - - 0.0000000000000003269 88.0
SRD3_k127_2115323_67 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000005147 77.0
SRD3_k127_2115323_68 ATP synthase I chain K02116 - - 0.000000000004093 72.0
SRD3_k127_2115323_69 - - - - 0.000004126 54.0
SRD3_k127_2115323_7 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 4.689e-268 838.0
SRD3_k127_2115323_70 - - - - 0.000008339 52.0
SRD3_k127_2115323_71 - - - - 0.0001659 51.0
SRD3_k127_2115323_72 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.0004973 50.0
SRD3_k127_2115323_73 Olfactory receptor K04257 - - 0.0005003 45.0
SRD3_k127_2115323_8 Protein of unknown function (DUF3141) - - - 6.386e-263 831.0
SRD3_k127_2115323_9 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.124e-261 810.0
SRD3_k127_2131868_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 4.217e-205 648.0
SRD3_k127_2131868_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 599.0
SRD3_k127_2131868_10 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 318.0
SRD3_k127_2131868_11 cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003457 322.0
SRD3_k127_2131868_12 POTRA domain, FtsQ-type - - - 0.000000000000000000000000000000000000000000003932 172.0
SRD3_k127_2131868_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 589.0
SRD3_k127_2131868_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 508.0
SRD3_k127_2131868_4 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 480.0
SRD3_k127_2131868_5 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006367 467.0
SRD3_k127_2131868_6 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 448.0
SRD3_k127_2131868_7 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 417.0
SRD3_k127_2131868_8 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 402.0
SRD3_k127_2131868_9 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 361.0
SRD3_k127_2154879_0 glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 1428.0
SRD3_k127_2154879_1 Dehydrogenase - - - 1.378e-287 904.0
SRD3_k127_2154879_2 TIGRFAM glutamate synthase, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 3.671e-224 702.0
SRD3_k127_2154879_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005685 579.0
SRD3_k127_2154879_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 422.0
SRD3_k127_2154879_5 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006102 328.0
SRD3_k127_2154879_6 Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01887 - 6.1.1.19 0.0000000000000008993 81.0
SRD3_k127_2181848_0 NADH-quinone oxidoreductase K00336 - 1.6.5.3 3.574e-301 945.0
SRD3_k127_2181848_1 Energy production and conversion Inorganic ion transport and metabolism K00341 - 1.6.5.3 5.972e-236 743.0
SRD3_k127_2181848_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 500.0
SRD3_k127_2181848_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 361.0
SRD3_k127_2181848_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005927 295.0
SRD3_k127_2181848_5 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000006602 229.0
SRD3_k127_2181848_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000008556 146.0
SRD3_k127_223166_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1500.0
SRD3_k127_223166_1 Histidine kinase-like ATPases - - - 8.295e-219 695.0
SRD3_k127_223166_2 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009516 425.0
SRD3_k127_223166_3 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000003884 257.0
SRD3_k127_223166_4 COG1943 Transposase and inactivated derivatives K07491 - - 0.0000000000000000000000000000000000000000000000000000001175 201.0
SRD3_k127_223166_5 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000102 192.0
SRD3_k127_223166_6 Histidine kinase K20976 - - 0.000000000000000000117 93.0
SRD3_k127_223166_7 Transposase - - - 0.000000000000149 76.0
SRD3_k127_2272613_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006299 582.0
SRD3_k127_2272613_1 Belongs to the PdxA family K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007817 426.0
SRD3_k127_2272613_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 334.0
SRD3_k127_2272613_3 FCD K11475 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007754 265.0
SRD3_k127_2272613_4 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000001765 239.0
SRD3_k127_2272613_5 CRS1_YhbY K07574 - - 0.0000000000000000000000000004053 118.0
SRD3_k127_2310179_0 Branched-chain amino acid ATP-binding cassette transporter - - - 2.729e-262 846.0
SRD3_k127_2310179_1 PFAM RNA-binding protein AU-1 Ribonuclease E G K08301 - - 1.281e-233 736.0
SRD3_k127_2310179_10 Bacterial regulatory proteins, tetR family K09017 - - 0.00000000000000000000000000000000000000000000000000000000000002903 237.0
SRD3_k127_2310179_11 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 0.0000000000000000000000000000000000000000000000000000001586 196.0
SRD3_k127_2310179_12 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000000001142 205.0
SRD3_k127_2310179_13 Bacterial protein of unknown function (DUF924) - - - 0.000000000000000000000000000000000000000000000000000001339 198.0
SRD3_k127_2310179_14 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000002862 196.0
SRD3_k127_2310179_15 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000002942 193.0
SRD3_k127_2310179_16 Phospholipase/Carboxylesterase - - - 0.00000000000000000000000000000000000000000000000003046 192.0
SRD3_k127_2310179_17 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000009043 167.0
SRD3_k127_2310179_18 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000007301 158.0
SRD3_k127_2310179_19 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000001862 142.0
SRD3_k127_2310179_2 Protein of unknown function (DUF1116) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 608.0
SRD3_k127_2310179_20 Protein of unknown function (DUF2877) - - - 0.00000000000000000000000000000183 133.0
SRD3_k127_2310179_21 - - - - 0.000002515 60.0
SRD3_k127_2310179_3 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 508.0
SRD3_k127_2310179_4 CoA binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 500.0
SRD3_k127_2310179_5 Amidohydrolase family K01485 - 3.5.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000089 481.0
SRD3_k127_2310179_6 Belongs to the carbamate kinase family K00926 - 2.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 413.0
SRD3_k127_2310179_7 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 412.0
SRD3_k127_2310179_8 Protein of unknown function (DUF808) K09781 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007849 365.0
SRD3_k127_2310179_9 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009562 352.0
SRD3_k127_233010_0 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 542.0
SRD3_k127_233010_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000002106 234.0
SRD3_k127_234410_0 Tricorn protease homolog K08676 - - 0.0 1118.0
SRD3_k127_234410_1 ABC transporter K06020 - 3.6.3.25 2.071e-290 899.0
SRD3_k127_234410_10 Amidase, hydantoinase carbamoylase family K06016 - 3.5.1.6,3.5.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 531.0
SRD3_k127_234410_11 Amidase K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 519.0
SRD3_k127_234410_12 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 455.0
SRD3_k127_234410_13 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 423.0
SRD3_k127_234410_14 PFAM ABC transporter K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008174 417.0
SRD3_k127_234410_15 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 396.0
SRD3_k127_234410_16 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 363.0
SRD3_k127_234410_17 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 362.0
SRD3_k127_234410_18 PFAM band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006995 357.0
SRD3_k127_234410_19 PFAM short-chain dehydrogenase reductase SDR K00034,K00059 - 1.1.1.100,1.1.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 341.0
SRD3_k127_234410_2 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 1.609e-222 711.0
SRD3_k127_234410_20 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 287.0
SRD3_k127_234410_21 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007238 284.0
SRD3_k127_234410_22 Protein of unknown function (DUF3570) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001148 288.0
SRD3_k127_234410_23 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003063 284.0
SRD3_k127_234410_24 COG0725 ABC-type molybdate transport system, periplasmic component K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002111 256.0
SRD3_k127_234410_25 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000007354 239.0
SRD3_k127_234410_26 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000005686 172.0
SRD3_k127_234410_27 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000005738 169.0
SRD3_k127_234410_28 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000001511 165.0
SRD3_k127_234410_29 PFAM PTS system fructose subfamily IIA component K02821 - 2.7.1.194 0.00000000000000000000000000000000000001782 149.0
SRD3_k127_234410_3 ABC transporter K06158 - - 3.514e-220 699.0
SRD3_k127_234410_30 phosphocarrier, HPr family K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000006669 130.0
SRD3_k127_234410_31 Uncharacterized conserved protein (DUF2249) - - - 0.000000000000000000000000000001099 141.0
SRD3_k127_234410_32 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000002289 117.0
SRD3_k127_234410_33 Dodecin K09165 - - 0.00000000000000000359 98.0
SRD3_k127_234410_34 Domain of unknown function (DUF4124) - - - 0.0000000000000003241 91.0
SRD3_k127_234410_35 UPF0391 membrane protein - - - 0.0000000000000005864 80.0
SRD3_k127_234410_36 Domain of unknown function (DUF4266) - - - 0.000000000001364 78.0
SRD3_k127_234410_4 Belongs to the ABC transporter superfamily K02031,K02032 - - 2.519e-209 678.0
SRD3_k127_234410_5 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 1.438e-206 667.0
SRD3_k127_234410_6 PFAM Xanthine uracil vitamin C permease K02824 - - 1.271e-196 622.0
SRD3_k127_234410_7 AmpG muropeptide MFS transporter K08218 K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005354 617.0
SRD3_k127_234410_8 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 610.0
SRD3_k127_234410_9 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 591.0
SRD3_k127_2363236_0 4Fe-4S dicluster domain - - - 8.904e-217 693.0
SRD3_k127_2363236_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008964 488.0
SRD3_k127_2363236_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000573 475.0
SRD3_k127_2363236_3 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009971 383.0
SRD3_k127_2363236_4 Nitrate reductase delta subunit - - - 0.00000000000000000000000000000000000000000786 162.0
SRD3_k127_2363236_5 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000001549 158.0
SRD3_k127_2363236_6 Protein of unknown function (DUF3305) - - - 0.0000000000000000000000000000000001222 139.0
SRD3_k127_2363236_7 Protein of unknown function (DUF3306) - - - 0.000000000000000000000975 106.0
SRD3_k127_2363236_8 - - - - 0.0000004544 55.0
SRD3_k127_2386318_0 aminopeptidase N K01256 - 3.4.11.2 5.691e-287 906.0
SRD3_k127_2386318_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004862 550.0
SRD3_k127_2386318_10 MotA TolQ ExbB proton channel family K03561,K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004958 279.0
SRD3_k127_2386318_11 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008186 274.0
SRD3_k127_2386318_12 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001339 266.0
SRD3_k127_2386318_13 Disulfide bond isomerase protein N-terminus K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000007061 218.0
SRD3_k127_2386318_14 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000005999 210.0
SRD3_k127_2386318_15 peptidase S16 K07157 - - 0.000000000000000000000000000000000000000000000009528 178.0
SRD3_k127_2386318_16 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.00000000000000000000000000000000000000000000008997 180.0
SRD3_k127_2386318_17 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000002328 160.0
SRD3_k127_2386318_18 sigma 54 modulation protein K05808 - - 0.0000000000000000000000000000000002515 137.0
SRD3_k127_2386318_19 TonB C terminal K03646 - - 0.0000000000000000000000000000009481 134.0
SRD3_k127_2386318_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 541.0
SRD3_k127_2386318_20 Tol-Pal system-associated acyl-CoA thioesterase K07107 - - 0.00000000000000000000000000001382 131.0
SRD3_k127_2386318_21 Biopolymer transport protein ExbD/TolR K03560 - - 0.000000000000000000000002324 115.0
SRD3_k127_2386318_22 short-chain dehydrogenase - - - 0.0000000000000000000000101 117.0
SRD3_k127_2386318_23 - - - - 0.000000000000000000002197 109.0
SRD3_k127_2386318_24 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.00000000000007352 78.0
SRD3_k127_2386318_3 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 490.0
SRD3_k127_2386318_4 tRNA wobble cytosine modification - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005089 450.0
SRD3_k127_2386318_5 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004565 385.0
SRD3_k127_2386318_6 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 377.0
SRD3_k127_2386318_7 ABC-type (Unclassified) transport system, ATPase component K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 376.0
SRD3_k127_2386318_8 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009723 329.0
SRD3_k127_2386318_9 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 291.0
SRD3_k127_2483221_0 Subtilase family - - - 6.729e-217 693.0
SRD3_k127_2483221_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 538.0
SRD3_k127_2483221_10 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000666 267.0
SRD3_k127_2483221_11 Pfam Glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005993 255.0
SRD3_k127_2483221_12 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000001252 235.0
SRD3_k127_2483221_13 Domain of unknown function (DUF4142) K08995 - - 0.0000000000000000000000000000000000000000000000000000000000000000001365 238.0
SRD3_k127_2483221_14 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000005532 226.0
SRD3_k127_2483221_15 ChaC-like protein K07232 - - 0.0000000000000000000000000000000000000000000000000000001432 205.0
SRD3_k127_2483221_16 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000007667 211.0
SRD3_k127_2483221_17 PFAM Abortive infection protein - - - 0.000000000000000000000000000000000001277 149.0
SRD3_k127_2483221_18 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000001571 131.0
SRD3_k127_2483221_19 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000000000000000182 97.0
SRD3_k127_2483221_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008729 514.0
SRD3_k127_2483221_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008617 476.0
SRD3_k127_2483221_4 antiporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 401.0
SRD3_k127_2483221_5 Belongs to the LDH2 MDH2 oxidoreductase family K00016 - 1.1.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 372.0
SRD3_k127_2483221_6 cyclopropane-fatty-acyl-phospholipid synthase K00574 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 364.0
SRD3_k127_2483221_7 Enoyl-(Acyl carrier protein) reductase K03793 - 1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 327.0
SRD3_k127_2483221_8 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009142 322.0
SRD3_k127_2483221_9 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006125 282.0
SRD3_k127_2539237_0 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 434.0
SRD3_k127_2539237_1 Aminotransferase class IV K00824 - 2.6.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004526 279.0
SRD3_k127_2539237_2 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000002941 194.0
SRD3_k127_2539237_3 protein import - - - 0.000000000000000003198 98.0
SRD3_k127_2539237_4 D-amino acid K00285 - 1.4.5.1 0.00000000000009058 70.0
SRD3_k127_2568004_0 FAD dependent oxidoreductase - - - 0.0 1057.0
SRD3_k127_2568004_1 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 3.059e-242 755.0
SRD3_k127_2568004_10 Cys/Met metabolism PLP-dependent enzyme K01760 - 4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000915 454.0
SRD3_k127_2568004_11 Binding-protein-dependent transport system inner membrane component K11083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 406.0
SRD3_k127_2568004_12 Belongs to the DapA family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000933 394.0
SRD3_k127_2568004_13 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006127 393.0
SRD3_k127_2568004_14 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 374.0
SRD3_k127_2568004_15 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 383.0
SRD3_k127_2568004_16 Peptidase C26 K01658,K07010 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008426 357.0
SRD3_k127_2568004_17 Adenylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 362.0
SRD3_k127_2568004_18 Aminoglycoside phosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 342.0
SRD3_k127_2568004_19 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 299.0
SRD3_k127_2568004_2 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 1.454e-221 694.0
SRD3_k127_2568004_20 Histidine kinase K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001484 284.0
SRD3_k127_2568004_21 Transcriptional regulator K13641 GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001042 274.0
SRD3_k127_2568004_22 ABC-type spermidine putrescine transport system, permease component II K11082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007913 258.0
SRD3_k127_2568004_23 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000001359 244.0
SRD3_k127_2568004_24 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000198 242.0
SRD3_k127_2568004_25 NUDIX hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000007917 217.0
SRD3_k127_2568004_26 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000005002 185.0
SRD3_k127_2568004_27 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000001609 182.0
SRD3_k127_2568004_28 Shikimate kinase K00851 - 2.7.1.12 0.0000000000000000000000000000000000002453 154.0
SRD3_k127_2568004_29 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.0000000000000000000004465 97.0
SRD3_k127_2568004_3 Na Pi-cotransporter II-related protein K03324 - - 2.301e-201 642.0
SRD3_k127_2568004_30 - - - - 0.00000000000001022 82.0
SRD3_k127_2568004_31 Glycine zipper 2TM domain K04062 - - 0.000000006527 60.0
SRD3_k127_2568004_4 Aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 602.0
SRD3_k127_2568004_5 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily K03430 - 2.6.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 560.0
SRD3_k127_2568004_6 phosphonoacetate hydrolase K19670 - 3.11.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 563.0
SRD3_k127_2568004_7 Bacterial extracellular solute-binding protein K11081 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 530.0
SRD3_k127_2568004_8 Iron-containing alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 504.0
SRD3_k127_2568004_9 Belongs to the ABC transporter superfamily K11084 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000762 512.0
SRD3_k127_2607937_0 PrkA AAA domain K07180 - - 0.0 1123.0
SRD3_k127_2607937_1 Hsp90 protein K04079 - - 8.695e-311 975.0
SRD3_k127_2607937_10 Lysylphosphatidylglycerol synthase TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000003599 241.0
SRD3_k127_2607937_11 MlaA lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000266 210.0
SRD3_k127_2607937_12 SpoVR family K06415 - - 0.000000000000000000000000000000000000000000000000000003368 199.0
SRD3_k127_2607937_13 PFAM toluene tolerance family protein K07323 - - 0.0000000000000000000000000000000000000000000000000001191 203.0
SRD3_k127_2607937_14 Nitroreductase family - GO:0000166,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0010181,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000001312 178.0
SRD3_k127_2607937_15 BON domain - - - 0.000000000000000000000000000000003558 138.0
SRD3_k127_2607937_16 Phosphorylase superfamily - - - 0.000000000000000000003068 99.0
SRD3_k127_2607937_17 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00000000001387 72.0
SRD3_k127_2607937_2 TIGRFAM hopanoid biosynthesis associated radical SAM protein HpnJ - - - 7.453e-251 782.0
SRD3_k127_2607937_3 MMPL family K07003 - - 1.077e-248 797.0
SRD3_k127_2607937_4 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 3.29e-219 692.0
SRD3_k127_2607937_5 Hopanoid biosynthesis associated radical SAM protein HpnH - - - 2.014e-198 629.0
SRD3_k127_2607937_6 Belongs to the UPF0229 family K09786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 463.0
SRD3_k127_2607937_7 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008063 457.0
SRD3_k127_2607937_8 Hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 - 2.4.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 376.0
SRD3_k127_2607937_9 Major facilitator superfamily K03449 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 346.0
SRD3_k127_282355_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1099.0
SRD3_k127_282355_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 5.992e-315 987.0
SRD3_k127_282355_10 Major Facilitator Superfamily - - - 0.000000000000000000000005872 106.0
SRD3_k127_282355_2 COG1014 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, gamma subunit K00174 - 1.2.7.11,1.2.7.3 7.961e-297 942.0
SRD3_k127_282355_3 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 549.0
SRD3_k127_282355_4 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006672 509.0
SRD3_k127_282355_5 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 443.0
SRD3_k127_282355_6 Histidine-specific methyltransferase, SAM-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004013 279.0
SRD3_k127_282355_7 AsmA family K07289,K07290 - - 0.00000000000000000000000000000000000000000000000000000000000000000007233 255.0
SRD3_k127_282355_8 Copper binding proteins, plastocyanin/azurin family - - - 0.000000000000000000000000000000000000000000000000000001472 199.0
SRD3_k127_282355_9 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000000000000463 149.0
SRD3_k127_2850424_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.0 1330.0
SRD3_k127_2850424_1 Protein of unknown function, DUF255 K06888 - - 1.615e-220 711.0
SRD3_k127_2850424_2 D-amino acid dehydrogenase K00285 - 1.4.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008554 513.0
SRD3_k127_2850424_3 The glycine cleavage system catalyzes the degradation of glycine K00605 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000655 474.0
SRD3_k127_2850424_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000001131 165.0
SRD3_k127_2850424_5 - - - - 0.000000000000000000000000000000000000000404 168.0
SRD3_k127_2850424_6 PFAM cytochrome c class I K08738 - - 0.0000000000000000000000000001536 119.0
SRD3_k127_2850424_7 Domain of unknown function (DUF3400) - - - 0.0000000000003608 69.0
SRD3_k127_2850424_8 Threonine dehydratase K01754 - 4.3.1.19 0.00006396 55.0
SRD3_k127_2855001_0 Heat shock 70 kDa protein K04043 - - 7.776e-222 695.0
SRD3_k127_2855001_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006202 575.0
SRD3_k127_2855001_2 - - - - 0.000000000000000000000000000000000000000000000000000005965 194.0
SRD3_k127_2855001_3 MobA-Related Protein K07141 - 2.7.7.76 0.000000000000000000000000000000000000000000000001577 181.0
SRD3_k127_2858131_0 chain 5 L K00341 - 1.6.5.3 2.33e-232 732.0
SRD3_k127_2858131_1 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 1.376e-223 709.0
SRD3_k127_2858131_2 enoyl-CoA hydratase K15513 - 4.1.2.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 621.0
SRD3_k127_2858131_3 LUD domain K18929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 587.0
SRD3_k127_2858131_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 560.0
SRD3_k127_2858131_5 HD domain K13815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 382.0
SRD3_k127_2858131_6 PFAM aminotransferase, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 381.0
SRD3_k127_2858131_7 Cysteine-rich domain K18928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 352.0
SRD3_k127_2858131_8 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K15546 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000839 322.0
SRD3_k127_2858131_9 LUD domain K00782 - - 0.00000000000000000000000000000000000000000000000000000000000002049 221.0
SRD3_k127_2864078_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 2.511e-239 758.0
SRD3_k127_2864078_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 581.0
SRD3_k127_2864078_2 Methionine synthase K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000847 519.0
SRD3_k127_2864078_3 Phospholipase D. Active site motifs. K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 504.0
SRD3_k127_2864078_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001917 276.0
SRD3_k127_2864078_5 Cytochrome c - - - 0.000000000000000000000000000000003628 133.0
SRD3_k127_2864078_6 - - - - 0.0000000000000004271 81.0
SRD3_k127_2864078_7 - - - - 0.0000001182 58.0
SRD3_k127_2974820_0 PFAM glycosyl transferase, family 51 K05366 - 2.4.1.129,3.4.16.4 1.091e-294 923.0
SRD3_k127_2974820_1 Male sterility protein K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 541.0
SRD3_k127_2974820_10 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000008958 260.0
SRD3_k127_2974820_11 Pilus assembly protein, PilO K02664 - - 0.000000000000000000000000000000000000000000000000000000000000000000000103 245.0
SRD3_k127_2974820_12 TIGRFAM lipopolysaccharide heptosyltransferase I K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003433 249.0
SRD3_k127_2974820_13 cytochrome - - - 0.0000000000000000000000000000000000000000000000000002717 198.0
SRD3_k127_2974820_14 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000001851 191.0
SRD3_k127_2974820_15 Fimbrial assembly protein (PilN) K02663 - - 0.0000000000000000000000000000000000000000000000001791 183.0
SRD3_k127_2974820_16 peptidase S1 and S6 chymotrypsin Hap K01337 - 3.4.21.50 0.0000000000000000000000000000000000000000000000005297 201.0
SRD3_k127_2974820_17 Pilus assembly protein, PilP K02665 - - 0.00000000000000000000000000000000000000000008838 175.0
SRD3_k127_2974820_18 - - - - 0.00000000000000000000001278 117.0
SRD3_k127_2974820_19 type IV pilus secretin PilQ K02666 - - 0.0000000000000000002714 93.0
SRD3_k127_2974820_2 Type IV pilus assembly protein PilM K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 477.0
SRD3_k127_2974820_20 - - - - 0.00000000000000292 91.0
SRD3_k127_2974820_3 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 472.0
SRD3_k127_2974820_4 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006487 452.0
SRD3_k127_2974820_5 PFAM NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 431.0
SRD3_k127_2974820_6 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 416.0
SRD3_k127_2974820_7 TIGRFAM type I secretion outer membrane protein, TolC family K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 296.0
SRD3_k127_2974820_8 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009419 282.0
SRD3_k127_2974820_9 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000002091 276.0
SRD3_k127_2980586_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 3.459e-210 670.0
SRD3_k127_2980586_1 2-hydroxyglutaryl-CoA dehydratase, D-component K04113 - 1.3.7.8 8.641e-209 678.0
SRD3_k127_2980586_10 regulatory protein TetR - - - 0.0000000000000000000000000000000000000000000000000000000000000000001032 236.0
SRD3_k127_2980586_11 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000007795 222.0
SRD3_k127_2980586_12 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000000009146 228.0
SRD3_k127_2980586_13 - - - - 0.0000000000000000000000000000000000001605 147.0
SRD3_k127_2980586_14 Ferredoxin K05337 - - 0.00000000000000000000000000000002694 137.0
SRD3_k127_2980586_15 Iron-sulfur cluster assembly protein - - - 0.0000000000000000000000000000271 124.0
SRD3_k127_2980586_16 Rubrerythrin - - - 0.000000000000000000000002425 109.0
SRD3_k127_2980586_17 Hemerythrin HHE cation binding domain - - - 0.00000000000000002326 88.0
SRD3_k127_2980586_18 CO dehydrogenase flavoprotein C-terminal domain K04109 - 1.3.7.9 0.000001888 50.0
SRD3_k127_2980586_2 Benzoyl-CoA reductase subunit K04114 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007931 597.0
SRD3_k127_2980586_3 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 566.0
SRD3_k127_2980586_4 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007049 562.0
SRD3_k127_2980586_5 Alcohol dehydrogenase GroES-like domain K07538 - 1.1.1.368 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 500.0
SRD3_k127_2980586_6 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003248 439.0
SRD3_k127_2980586_7 BadF/BadG/BcrA/BcrD ATPase family K04115 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009641 373.0
SRD3_k127_2980586_8 Vitamin k epoxide reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 338.0
SRD3_k127_2980586_9 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005252 291.0
SRD3_k127_3008522_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 0.0 1345.0
SRD3_k127_3008522_1 Dehydratase family K13875 - 4.2.1.25 8.029e-318 979.0
SRD3_k127_3008522_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 412.0
SRD3_k127_3008522_3 Protein conserved in bacteria K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 372.0
SRD3_k127_3008522_4 PFAM metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 310.0
SRD3_k127_3008522_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000000012 241.0
SRD3_k127_3008522_6 Membrane K15977 - - 0.00000000000000000000000000000000000000001103 157.0
SRD3_k127_302926_0 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004992 484.0
SRD3_k127_302926_1 Disulphide bond corrector protein DsbC K04084,K08344 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 324.0
SRD3_k127_302926_2 Putative zinc-finger - - - 0.00000000000000000000000000000000000000000000002884 180.0
SRD3_k127_302926_3 Sigma-70, region 4 - - - 0.00000000000000000000000000000000000000000003007 167.0
SRD3_k127_302926_4 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000001036 134.0
SRD3_k127_302926_5 Porin subfamily - - - 0.0000000000000000000000000003686 119.0
SRD3_k127_3030245_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1061.0
SRD3_k127_3030245_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 2.36e-259 814.0
SRD3_k127_3030245_10 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003771 355.0
SRD3_k127_3030245_11 Amino acid amide ABC transporter ATP-binding protein 2, HAAT family K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 355.0
SRD3_k127_3030245_12 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004796 342.0
SRD3_k127_3030245_13 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000398 252.0
SRD3_k127_3030245_14 Psort location CytoplasmicMembrane, score 10.00 K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000137 251.0
SRD3_k127_3030245_15 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001873 256.0
SRD3_k127_3030245_16 preprotein translocase subunit YajC K03210 - - 0.00000000000000000000000000000001452 131.0
SRD3_k127_3030245_17 - - - - 0.0000000000000000009718 91.0
SRD3_k127_3030245_18 Subtilase family K08651,K14645 - 3.4.21.66 0.000000000000000003405 95.0
SRD3_k127_3030245_19 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.00000006605 54.0
SRD3_k127_3030245_2 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 2.132e-256 797.0
SRD3_k127_3030245_20 - - - - 0.0006003 51.0
SRD3_k127_3030245_3 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 610.0
SRD3_k127_3030245_4 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 594.0
SRD3_k127_3030245_5 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 556.0
SRD3_k127_3030245_6 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008941 435.0
SRD3_k127_3030245_7 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 418.0
SRD3_k127_3030245_8 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 423.0
SRD3_k127_3030245_9 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 396.0
SRD3_k127_3071933_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1064.0
SRD3_k127_3071933_1 ABC-type multidrug transport system, ATPase and permease K06147 - - 1.668e-228 724.0
SRD3_k127_3071933_10 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000000000000000001011 140.0
SRD3_k127_3071933_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 5.248e-200 658.0
SRD3_k127_3071933_3 COG0467 RecA-superfamily ATPases implicated in signal K08482 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 569.0
SRD3_k127_3071933_4 ABC-type dipeptide transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004459 434.0
SRD3_k127_3071933_5 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 421.0
SRD3_k127_3071933_6 KR domain K00019 GO:0000003,GO:0000166,GO:0001568,GO:0001676,GO:0001944,GO:0003674,GO:0003824,GO:0004888,GO:0004930,GO:0004953,GO:0004954,GO:0004955,GO:0004957,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006690,GO:0006692,GO:0006693,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0007186,GO:0007275,GO:0007276,GO:0007292,GO:0007565,GO:0007567,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009653,GO:0009719,GO:0009987,GO:0010033,GO:0016053,GO:0016404,GO:0016491,GO:0016614,GO:0016616,GO:0019372,GO:0019752,GO:0019953,GO:0022414,GO:0023052,GO:0030728,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0033559,GO:0035239,GO:0035295,GO:0036094,GO:0038023,GO:0042221,GO:0042759,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0045786,GO:0046394,GO:0046456,GO:0046983,GO:0048037,GO:0048514,GO:0048519,GO:0048523,GO:0048609,GO:0048731,GO:0048844,GO:0048856,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051287,GO:0051704,GO:0051716,GO:0051726,GO:0055114,GO:0060089,GO:0060840,GO:0065007,GO:0070013,GO:0070403,GO:0070493,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071559,GO:0071560,GO:0071704,GO:0072330,GO:0072358,GO:0072359,GO:0097070,GO:0097159,GO:1901265,GO:1901363,GO:1901568,GO:1901570,GO:1901576,GO:2001300,GO:2001301 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004138 382.0
SRD3_k127_3071933_7 Aminotransferase class I and II K00832 - 2.6.1.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 370.0
SRD3_k127_3071933_8 Low molecular weight phosphatase family K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000000000002562 196.0
SRD3_k127_3071933_9 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000003362 188.0
SRD3_k127_309601_0 Uncharacterized protein family (UPF0051) K09014 - - 4.516e-278 868.0
SRD3_k127_309601_1 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006799 574.0
SRD3_k127_309601_10 Rieske-like [2Fe-2S] domain K05710,K18087 - - 0.0000000000000000000000000000000000000000000003007 168.0
SRD3_k127_309601_11 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000001206 170.0
SRD3_k127_309601_12 metal-sulfur cluster biosynthetic enzyme K02612 - - 0.0000000000000000000000000000000001355 143.0
SRD3_k127_309601_2 Cysteine desulfurase K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005931 568.0
SRD3_k127_309601_3 Uncharacterized protein family (UPF0051) K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007482 441.0
SRD3_k127_309601_4 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 389.0
SRD3_k127_309601_5 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 351.0
SRD3_k127_309601_6 NifU-like N terminal domain K04488 - - 0.0000000000000000000000000000000000000000000000000000000001652 209.0
SRD3_k127_309601_7 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000000000000000000001141 206.0
SRD3_k127_309601_8 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000001719 183.0
SRD3_k127_309601_9 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000002068 187.0
SRD3_k127_3145874_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 1.205e-239 748.0
SRD3_k127_3145874_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 322.0
SRD3_k127_3145874_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002135 278.0
SRD3_k127_3145874_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004991 282.0
SRD3_k127_3145874_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000003608 249.0
SRD3_k127_3145874_5 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000007517 229.0
SRD3_k127_3145874_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000006976 206.0
SRD3_k127_3145874_7 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000000000009764 117.0
SRD3_k127_3145874_8 Integrase core domain protein - - - 0.00000000000000000000000465 108.0
SRD3_k127_3145874_9 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000005198 74.0
SRD3_k127_3239343_0 Ftsk_gamma K03466 - - 8.409e-281 876.0
SRD3_k127_3239343_1 DNA replication, recombination, and repair K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 610.0
SRD3_k127_3239343_10 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000009793 89.0
SRD3_k127_3239343_2 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 589.0
SRD3_k127_3239343_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 584.0
SRD3_k127_3239343_4 DNA polymerase III tau subunit V interacting with alpha K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009366 527.0
SRD3_k127_3239343_5 Bacterial periplasmic substrate-binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 310.0
SRD3_k127_3239343_6 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007526 291.0
SRD3_k127_3239343_7 Creatinine amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001119 291.0
SRD3_k127_3239343_8 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000000000000000000000003966 218.0
SRD3_k127_3239343_9 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000008326 174.0
SRD3_k127_345019_0 Alpha-amylase domain K01187 - 3.2.1.20 0.0 1472.0
SRD3_k127_345019_1 Belongs to the glycosyl hydrolase 13 family - - - 0.0 1062.0
SRD3_k127_345019_10 trehalohydrolase K01236 - 3.2.1.141 2.789e-208 703.0
SRD3_k127_345019_11 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006728 528.0
SRD3_k127_345019_12 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 520.0
SRD3_k127_345019_13 Binding-protein-dependent transport system inner membrane component K02025,K10237 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 510.0
SRD3_k127_345019_14 PFAM binding-protein-dependent transport systems inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008671 494.0
SRD3_k127_345019_15 Sodium/calcium exchanger protein K07300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006456 418.0
SRD3_k127_345019_16 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 380.0
SRD3_k127_345019_17 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008714 375.0
SRD3_k127_345019_18 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000002885 252.0
SRD3_k127_345019_19 PFAM Conserved TM helix repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001758 240.0
SRD3_k127_345019_2 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0 1053.0
SRD3_k127_345019_20 BON domain - - - 0.0000000000000000000000000000000000000000000000000000027 208.0
SRD3_k127_345019_21 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000000002977 160.0
SRD3_k127_345019_22 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000007635 153.0
SRD3_k127_345019_23 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0000000000000000000000000000000000003586 160.0
SRD3_k127_345019_24 Cold shock protein K03704 - - 0.00000000000000000000000000000000003585 134.0
SRD3_k127_345019_25 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000002975 131.0
SRD3_k127_345019_26 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000004575 106.0
SRD3_k127_345019_27 - - - - 0.00000000000000002769 90.0
SRD3_k127_345019_3 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 9.535e-298 924.0
SRD3_k127_345019_4 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 8.714e-293 913.0
SRD3_k127_345019_5 SMART alpha amylase catalytic sub domain K00705,K06044 - 2.4.1.25,5.4.99.15 5.801e-292 929.0
SRD3_k127_345019_6 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 3.002e-286 895.0
SRD3_k127_345019_7 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 1.903e-246 788.0
SRD3_k127_345019_8 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 9.129e-217 719.0
SRD3_k127_345019_9 Bacterial extracellular solute-binding protein K02027 - - 1.044e-214 674.0
SRD3_k127_3455082_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K00249,K00294,K13821 - 1.2.1.88,1.3.8.7,1.5.5.2 0.0 1527.0
SRD3_k127_3455082_1 Na H antiporter MnhB subunit-related protein K05559 - - 0.0 1298.0
SRD3_k127_3455082_10 Glycine D-amino acid K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000571 517.0
SRD3_k127_3455082_11 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 509.0
SRD3_k127_3455082_12 Belongs to the alpha-IPM synthase homocitrate synthase family K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009809 468.0
SRD3_k127_3455082_13 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 456.0
SRD3_k127_3455082_14 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000907 427.0
SRD3_k127_3455082_15 Sodium/hydrogen exchanger family K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 407.0
SRD3_k127_3455082_16 oxidoreductase K13020 - 1.1.1.335 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 389.0
SRD3_k127_3455082_17 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005854 371.0
SRD3_k127_3455082_18 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 365.0
SRD3_k127_3455082_19 Xylose isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 366.0
SRD3_k127_3455082_2 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K04099,K04101 - 1.13.11.57,1.13.11.8 7.844e-237 737.0
SRD3_k127_3455082_20 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 348.0
SRD3_k127_3455082_21 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 346.0
SRD3_k127_3455082_22 Bacterial extracellular solute-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001859 259.0
SRD3_k127_3455082_23 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000002932 205.0
SRD3_k127_3455082_24 antiporter K05562 - - 0.000000000000000000000000000000000000000008184 159.0
SRD3_k127_3455082_25 Multisubunit Na H antiporter, MnhC subunit K05560 - - 0.0000000000000000000000000000000000000001167 160.0
SRD3_k127_3455082_26 PFAM Na H antiporter subunit K05564 - - 0.0000000000000000000000000001964 119.0
SRD3_k127_3455082_27 Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali K05563 - - 0.000000000000000000000000001885 121.0
SRD3_k127_3455082_28 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000006099 114.0
SRD3_k127_3455082_29 Protein of unknown function (DUF3617) - - - 0.000000000001661 75.0
SRD3_k127_3455082_3 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 5.502e-199 624.0
SRD3_k127_3455082_30 Belongs to the UPF0337 (CsbD) family - - - 0.00000001345 63.0
SRD3_k127_3455082_4 Amidohydrolase K10220,K14333 - 4.1.1.46,4.2.1.83 2.828e-194 622.0
SRD3_k127_3455082_5 L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 588.0
SRD3_k127_3455082_6 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K00836 - 2.6.1.19,2.6.1.76 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 583.0
SRD3_k127_3455082_7 PFAM NADH Ubiquinone plastoquinone (complex I) K05561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007724 595.0
SRD3_k127_3455082_8 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009745 571.0
SRD3_k127_3455082_9 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 516.0
SRD3_k127_3529809_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 481.0
SRD3_k127_3529809_1 PFAM Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 478.0
SRD3_k127_3529809_2 RsbT co-antagonist protein rsbRD N-terminal domain K17763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 332.0
SRD3_k127_3529809_3 Stage II sporulation protein E - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003784 270.0
SRD3_k127_3529809_4 Histidine kinase-like ATPases K17752 - 2.7.11.1 0.000000000000000000000000000000000000000000000001756 177.0
SRD3_k127_3529809_5 transporter antisigma-factor antagonist STAS K17762 - - 0.0000000000000000000000000000000000000000002897 176.0
SRD3_k127_3529809_6 Smr protein MutS2 - - - 0.00000000000000000000000000000000000000002715 162.0
SRD3_k127_3529809_7 FtsK SpoIIIE K03466 - - 0.0000000000000000000001643 100.0
SRD3_k127_3587426_0 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 3.188e-230 737.0
SRD3_k127_3587426_1 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 506.0
SRD3_k127_3587426_2 Belongs to the ClpA ClpB family K03694 - - 0.000000000000000000000000000000000000000000000000000000000000000000001495 241.0
SRD3_k127_3587426_3 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000003625 153.0
SRD3_k127_3587426_4 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000005576 144.0
SRD3_k127_3587426_5 Deoxynucleoside kinase - - - 0.0000000000000000000000000002084 124.0
SRD3_k127_3589491_0 Molybdopterin-binding domain of aldehyde dehydrogenase - - - 4.137e-272 865.0
SRD3_k127_3589491_1 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 606.0
SRD3_k127_3589491_2 PFAM alanine racemase domain protein K19967 - 4.1.2.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 385.0
SRD3_k127_3589491_3 beta-hydroxylase K12979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000882 374.0
SRD3_k127_3589491_4 [2Fe-2S] binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001975 233.0
SRD3_k127_3589491_5 transmembrane transcriptional regulator (anti-sigma factor) - - - 0.0000000000000000000000000000000000000000000002692 184.0
SRD3_k127_3589491_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000002346 159.0
SRD3_k127_3589491_7 BON domain - - - 0.000000000000000000005026 108.0
SRD3_k127_3589491_8 Cytochrome C oxidase, cbb3-type, subunit III K18030 - 1.17.2.1 0.00000000000104 70.0
SRD3_k127_359980_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 2.441e-260 812.0
SRD3_k127_359980_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.143e-225 707.0
SRD3_k127_359980_10 LD-carboxypeptidase K01297 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000007705 276.0
SRD3_k127_359980_11 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000002285 235.0
SRD3_k127_359980_12 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000000000000003677 220.0
SRD3_k127_359980_13 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000000000006896 196.0
SRD3_k127_359980_14 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000001249 179.0
SRD3_k127_359980_15 PFAM Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000002846 161.0
SRD3_k127_359980_16 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000001161 121.0
SRD3_k127_359980_17 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000009202 124.0
SRD3_k127_359980_18 - - - - 0.000000000000000000000003245 108.0
SRD3_k127_359980_19 Domain of unknown function (DUF4124) - - - 0.000000001763 64.0
SRD3_k127_359980_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004827 566.0
SRD3_k127_359980_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 435.0
SRD3_k127_359980_4 Peptidase family M50 K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 398.0
SRD3_k127_359980_5 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006045 366.0
SRD3_k127_359980_6 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 363.0
SRD3_k127_359980_7 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 322.0
SRD3_k127_359980_8 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002469 274.0
SRD3_k127_359980_9 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004722 276.0
SRD3_k127_376241_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 2.165e-229 716.0
SRD3_k127_376241_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 3.917e-198 625.0
SRD3_k127_376241_10 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000885 222.0
SRD3_k127_376241_11 CBS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000519 187.0
SRD3_k127_376241_12 repeat protein - - - 0.0000000000000000000000000000000000000000000007431 186.0
SRD3_k127_376241_13 ferrous iron transport protein K07230 - - 0.00000000000000000000000000000000000000000004372 165.0
SRD3_k127_376241_14 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000002044 139.0
SRD3_k127_376241_15 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000002619 115.0
SRD3_k127_376241_16 metal-binding, possibly nucleic acid-binding protein K07040 - - 0.000000000000000008422 89.0
SRD3_k127_376241_17 - - - - 0.00001934 48.0
SRD3_k127_376241_2 Bacterial extracellular solute-binding protein, family 7 - - - 3.002e-195 621.0
SRD3_k127_376241_3 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 605.0
SRD3_k127_376241_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 453.0
SRD3_k127_376241_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 444.0
SRD3_k127_376241_6 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 425.0
SRD3_k127_376241_7 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 374.0
SRD3_k127_376241_8 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 318.0
SRD3_k127_376241_9 Tetrapyrrole (Corrin/Porphyrin) Methylases K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000001511 245.0
SRD3_k127_3779609_0 Malic enzyme K00029 - 1.1.1.40 0.0 1054.0
SRD3_k127_3779609_1 Cytochrome c-type biogenesis protein CcmF K02198 - - 3.163e-284 897.0
SRD3_k127_3779609_10 Malonyl-CoA decarboxylase N-terminal domain K01578 - 4.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 403.0
SRD3_k127_3779609_11 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 327.0
SRD3_k127_3779609_12 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 318.0
SRD3_k127_3779609_13 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 322.0
SRD3_k127_3779609_14 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 329.0
SRD3_k127_3779609_15 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 305.0
SRD3_k127_3779609_16 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002308 263.0
SRD3_k127_3779609_17 Cytochrome c-type biogenesis protein K02200 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002017 255.0
SRD3_k127_3779609_18 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000000001669 246.0
SRD3_k127_3779609_19 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000000000000001384 234.0
SRD3_k127_3779609_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 4.581e-206 649.0
SRD3_k127_3779609_20 oxidoreductase DsbE K02199 - - 0.00000000000000000000000000000000000000000000000000000000000000000003895 261.0
SRD3_k127_3779609_21 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000003902 238.0
SRD3_k127_3779609_22 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000000000000000002626 222.0
SRD3_k127_3779609_23 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000000000000000000005827 215.0
SRD3_k127_3779609_24 Ribosomal protein L17 K02879 - - 0.0000000000000000000000000000000000000000000000000000000001953 205.0
SRD3_k127_3779609_25 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A K02876 - - 0.00000000000000000000000000000000000000000000000000000001157 201.0
SRD3_k127_3779609_26 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000001019 196.0
SRD3_k127_3779609_27 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000000000000021 195.0
SRD3_k127_3779609_28 Beta/gamma crystallins - - - 0.0000000000000000000000000000000000000000000000000005156 195.0
SRD3_k127_3779609_29 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000007883 179.0
SRD3_k127_3779609_3 Receptor family ligand binding region - - - 1.996e-204 645.0
SRD3_k127_3779609_30 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000000000000000000000838 166.0
SRD3_k127_3779609_31 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000000001355 158.0
SRD3_k127_3779609_32 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000000000000000000008353 150.0
SRD3_k127_3779609_33 - - - - 0.000000000000000000000000000000000000002582 158.0
SRD3_k127_3779609_34 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000003773 132.0
SRD3_k127_3779609_35 Natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000114 128.0
SRD3_k127_3779609_36 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000001534 138.0
SRD3_k127_3779609_37 Family of unknown function (DUF5329) - - - 0.000000000000000006448 89.0
SRD3_k127_3779609_38 Putative prokaryotic signal transducing protein - - - 0.0000000000000000883 85.0
SRD3_k127_3779609_39 Ribosomal protein L30 K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000002151 83.0
SRD3_k127_3779609_4 FAD linked oxidase domain protein - - - 6.828e-202 646.0
SRD3_k127_3779609_40 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000005527 68.0
SRD3_k127_3779609_5 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008042 540.0
SRD3_k127_3779609_6 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006019 507.0
SRD3_k127_3779609_7 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K01457 - 3.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007168 537.0
SRD3_k127_3779609_8 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 462.0
SRD3_k127_3779609_9 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008856 397.0
SRD3_k127_3785273_0 Rieske-like [2Fe-2S] domain - - - 3.469e-234 736.0
SRD3_k127_3785273_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K16871 - 2.6.1.96 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 592.0
SRD3_k127_3785273_2 PFAM extracellular solute-binding protein family 1 K02055 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 510.0
SRD3_k127_3785273_3 Binding-protein-dependent transport system inner membrane component K02054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006533 454.0
SRD3_k127_3785273_4 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052,K11072,K11076 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007484 436.0
SRD3_k127_3785273_5 Binding-protein-dependent transport system inner membrane component K02053 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 325.0
SRD3_k127_3785273_6 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000007559 134.0
SRD3_k127_3785273_7 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.00001275 47.0
SRD3_k127_3789585_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 580.0
SRD3_k127_3789585_1 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 340.0
SRD3_k127_3789585_10 Glycosyltransferase like family 2 - - - 0.0001315 55.0
SRD3_k127_3789585_2 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 310.0
SRD3_k127_3789585_3 across the inner bacterial membrane to transport large molecules across the outer bacterial membrane. InterPro Biopolymer transport protein ExbD TolR Pfam Biopolymer transport protein ExbD TolR no signal peptide K03559 - - 0.000000000000000000000000000000000000000000000000001938 188.0
SRD3_k127_3789585_4 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000000000000000000000000000000004046 187.0
SRD3_k127_3789585_5 Protein conserved in bacteria - - - 0.00000000000000000000000000000000005363 155.0
SRD3_k127_3789585_6 Protein conserved in bacteria - - - 0.0000000000000000000000000000001889 143.0
SRD3_k127_3789585_7 - - - - 0.0000000000000008906 91.0
SRD3_k127_3789585_8 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000001103 79.0
SRD3_k127_3789585_9 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.00004546 57.0
SRD3_k127_3790120_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 3.183e-199 640.0
SRD3_k127_3790120_1 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 6.979e-198 644.0
SRD3_k127_3790120_10 CopC domain - - - 0.00000000000000000000002187 108.0
SRD3_k127_3790120_11 Copper resistance protein D K07245 - - 0.00000000000000000000004612 110.0
SRD3_k127_3790120_12 ABC-type transport auxiliary lipoprotein component - - - 0.000000000000000000004777 107.0
SRD3_k127_3790120_2 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 586.0
SRD3_k127_3790120_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 - 1.1.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 428.0
SRD3_k127_3790120_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 295.0
SRD3_k127_3790120_5 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001018 294.0
SRD3_k127_3790120_6 Polyhydroxyalkanoate synthesis repressor PhaR - - - 0.0000000000000000000000000000000000000000000000000000000000003941 231.0
SRD3_k127_3790120_7 Mammalian cell entry related domain protein K02067,K06192 - - 0.00000000000000000000000000000000000000000000001915 181.0
SRD3_k127_3790120_8 helix_turn_helix, arabinose operon control protein K07506 - - 0.00000000000000000000000000000000000000000038 169.0
SRD3_k127_3790120_9 Phasin protein - - - 0.0000000000000000000000000001771 123.0
SRD3_k127_3825308_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1447.0
SRD3_k127_3825308_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 5.075e-210 672.0
SRD3_k127_3825308_10 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 307.0
SRD3_k127_3825308_11 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 301.0
SRD3_k127_3825308_12 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001489 295.0
SRD3_k127_3825308_13 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000003231 237.0
SRD3_k127_3825308_14 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 0.000000000000000000000000000000000000000000000000001859 186.0
SRD3_k127_3825308_15 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000008096 196.0
SRD3_k127_3825308_16 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.0000000000000000000000000000002015 136.0
SRD3_k127_3825308_17 Bacterial regulatory protein, Fis family K03557 - - 0.0000000000000000004333 99.0
SRD3_k127_3825308_18 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000107 94.0
SRD3_k127_3825308_19 - - - - 0.00000000005006 75.0
SRD3_k127_3825308_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006861 608.0
SRD3_k127_3825308_3 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 571.0
SRD3_k127_3825308_4 aminopeptidase K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 567.0
SRD3_k127_3825308_5 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009387 472.0
SRD3_k127_3825308_6 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009459 428.0
SRD3_k127_3825308_7 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009324 407.0
SRD3_k127_3825308_8 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 354.0
SRD3_k127_3825308_9 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007064 345.0
SRD3_k127_3839526_0 Phosphoglucose isomerase K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 454.0
SRD3_k127_3839526_1 PFAM transglutaminase domain protein K22452 - 2.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 423.0
SRD3_k127_3839526_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 356.0
SRD3_k127_3839526_3 Lytic murein transglycosylase K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001436 276.0
SRD3_k127_3839526_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000007618 252.0
SRD3_k127_3839526_5 Lysin motif K06194 - - 0.0000000000000000000000000000000000000000000000000000000000000008204 246.0
SRD3_k127_3839526_6 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000001022 138.0
SRD3_k127_3848586_0 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 2.025e-297 929.0
SRD3_k127_3848586_1 Poly-beta-hydroxybutyrate polymerase N terminal K03821 - - 2.102e-261 829.0
SRD3_k127_3848586_10 Universal stress protein - - - 0.000000000000000000000001282 114.0
SRD3_k127_3848586_11 - - - - 0.00000000000001828 80.0
SRD3_k127_3848586_12 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000008317 76.0
SRD3_k127_3848586_2 Pfam:Pyridox_oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001061 231.0
SRD3_k127_3848586_3 Domains REC, HisKA, HATPase_c - - - 0.00000000000000000000000000000000000000000000000000000000000000000326 239.0
SRD3_k127_3848586_4 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000005907 228.0
SRD3_k127_3848586_5 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000000006672 174.0
SRD3_k127_3848586_6 Cupin domain - - - 0.0000000000000000000000000000000000000008353 150.0
SRD3_k127_3848586_7 ribosomal large subunit export from nucleus - - - 0.00000000000000000000000000000000000002319 149.0
SRD3_k127_3848586_8 Hemerythrin HHE cation binding - - - 0.0000000000000000000000000000000000933 141.0
SRD3_k127_3848586_9 universal stress protein - - - 0.000000000000000000000000000003195 126.0
SRD3_k127_384892_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 555.0
SRD3_k127_384892_1 Catalyzes the deamination of guanine K01487 - 3.5.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 447.0
SRD3_k127_384892_2 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 357.0
SRD3_k127_384892_3 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 304.0
SRD3_k127_384892_4 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002916 311.0
SRD3_k127_384892_5 ATP-binding protein K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001229 267.0
SRD3_k127_384892_6 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000005811 145.0
SRD3_k127_384892_7 Belongs to the BolA IbaG family - - - 0.0000000000000000000000001335 107.0
SRD3_k127_3915514_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789 - - 0.0 1531.0
SRD3_k127_3915514_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07789 - - 0.0 1490.0
SRD3_k127_3915514_10 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000005815 162.0
SRD3_k127_3915514_11 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000119 145.0
SRD3_k127_3915514_12 - - - - 0.00000000000000000000000000000000003829 144.0
SRD3_k127_3915514_13 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.0000000000000000000000000000008044 126.0
SRD3_k127_3915514_14 PFAM Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000001886 123.0
SRD3_k127_3915514_15 Succinate dehydrogenase hydrophobic membrane anchor K00242 - - 0.000000000000000000000006017 107.0
SRD3_k127_3915514_16 Transglycosylase associated protein - - - 0.00000000000000000000002 102.0
SRD3_k127_3915514_17 - - - - 0.0000000008368 65.0
SRD3_k127_3915514_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 7.598e-285 882.0
SRD3_k127_3915514_3 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 2.555e-246 776.0
SRD3_k127_3915514_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007434 488.0
SRD3_k127_3915514_5 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 471.0
SRD3_k127_3915514_6 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003849 351.0
SRD3_k127_3915514_7 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000519 313.0
SRD3_k127_3915514_8 Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009855 263.0
SRD3_k127_3915514_9 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000000000000002314 212.0
SRD3_k127_3920015_0 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 1.627e-203 639.0
SRD3_k127_3920015_1 Transcriptional regulator K13634 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 391.0
SRD3_k127_3920015_10 Transcriptional regulator, LuxR family K07782 - - 0.00000000000000003161 93.0
SRD3_k127_3920015_2 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009986 372.0
SRD3_k127_3920015_3 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008916 378.0
SRD3_k127_3920015_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 323.0
SRD3_k127_3920015_5 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 334.0
SRD3_k127_3920015_6 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006058 252.0
SRD3_k127_3920015_7 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000001385 248.0
SRD3_k127_3920015_8 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000001749 243.0
SRD3_k127_3920015_9 acr, cog1430 K09005 - - 0.000000000000000000000000000000002429 136.0
SRD3_k127_3921205_0 COG1840 ABC-type Fe3 transport system, periplasmic component K02055 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 547.0
SRD3_k127_3921205_1 Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) K01484 - 3.5.3.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 476.0
SRD3_k127_3921205_2 COG3842 ABC-type spermidine putrescine transport systems, ATPase components K02052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006221 332.0
SRD3_k127_3921205_3 Binding-protein-dependent transport system inner membrane component K02053 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002181 259.0
SRD3_k127_3921205_4 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000002617 185.0
SRD3_k127_3937518_0 Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family K03455 - - 1.863e-195 628.0
SRD3_k127_3937518_1 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005495 396.0
SRD3_k127_3937518_10 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.00000000000000002149 89.0
SRD3_k127_3937518_11 NTP binding protein (Contains STAS domain) K07122 - - 0.0000008943 55.0
SRD3_k127_3937518_12 Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family K03455 - - 0.000215 44.0
SRD3_k127_3937518_2 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 386.0
SRD3_k127_3937518_3 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009087 364.0
SRD3_k127_3937518_4 PFAM VacJ family lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000000000000002942 239.0
SRD3_k127_3937518_5 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.00000000000000000000000000000000000000000000000000000000002903 223.0
SRD3_k127_3937518_6 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000001608 197.0
SRD3_k127_3937518_7 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000001428 155.0
SRD3_k127_3937518_8 TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.000000000000000000000000000000000007752 158.0
SRD3_k127_3937518_9 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.000000000000000003073 94.0
SRD3_k127_3956960_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.487e-213 670.0
SRD3_k127_3956960_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008663 606.0
SRD3_k127_3956960_10 Pfam:DUF1049 K08992 - - 0.000003496 57.0
SRD3_k127_3956960_2 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 533.0
SRD3_k127_3956960_3 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 469.0
SRD3_k127_3956960_4 Glycosyl transferase family 41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 443.0
SRD3_k127_3956960_5 pfkB family carbohydrate kinase K03272,K21344 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009223 384.0
SRD3_k127_3956960_6 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008027 272.0
SRD3_k127_3956960_7 protein involved in response to NO - - - 0.000000000000000000000000000000000000000000000000000000000009439 219.0
SRD3_k127_3956960_8 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.000000000000000000000000000000000000000000115 165.0
SRD3_k127_3956960_9 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000003138 156.0
SRD3_k127_3957089_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1366.0
SRD3_k127_3957089_1 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 1.117e-306 977.0
SRD3_k127_3957089_2 SAF - - - 3.095e-211 685.0
SRD3_k127_3957089_3 Histidine ammonia-lyase K01745 - 4.3.1.3 1.664e-200 642.0
SRD3_k127_3957089_4 Belongs to the UbiD family K16874 - - 2.953e-200 640.0
SRD3_k127_3957089_5 TIGRFAM Imidazolonepropionase K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007135 578.0
SRD3_k127_3957089_6 TIGRFAM Formiminoglutamate deiminase K05603 - 3.5.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 534.0
SRD3_k127_3957089_7 NMT1/THI5 like K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001356 280.0
SRD3_k127_3957089_8 AMP-binding enzyme C-terminal domain K00666 - - 0.00000000000000000000000000000000000000000000000000000006926 198.0
SRD3_k127_3957089_9 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000004254 203.0
SRD3_k127_3962298_0 DNA helicase K03654 - 3.6.4.12 9.971e-273 856.0
SRD3_k127_3962298_1 Gamma-glutamyltranspeptidase - - - 7.304e-217 687.0
SRD3_k127_3962298_10 Gaf domain - - - 0.000000000000000000000000000000004037 137.0
SRD3_k127_3962298_11 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000001119 115.0
SRD3_k127_3962298_12 alpha/beta hydrolase fold - - - 0.000000009913 61.0
SRD3_k127_3962298_2 Bacterial extracellular solute-binding protein K02055 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 458.0
SRD3_k127_3962298_3 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 428.0
SRD3_k127_3962298_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 367.0
SRD3_k127_3962298_5 ABC-type spermidine putrescine transport system, permease component I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 348.0
SRD3_k127_3962298_6 DNA import into cell involved in transformation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 346.0
SRD3_k127_3962298_7 Biotin-protein ligase, N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002765 262.0
SRD3_k127_3962298_8 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000008537 249.0
SRD3_k127_3962298_9 Dihydrodipicolinate synthetase family K21062 - 3.5.4.22 0.0000000000000000000000000000000000000000000000000000001206 198.0
SRD3_k127_3965629_0 PFAM Glycosyl transferase, family 20 K00697 - 2.4.1.15,2.4.1.347 3.13e-321 999.0
SRD3_k127_3965629_1 Tripartite tricarboxylate transporter TctA family - - - 2.014e-228 716.0
SRD3_k127_3965629_10 Ion channel K10716 - - 0.000000000000000000000000000000000000000000000000331 182.0
SRD3_k127_3965629_11 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000000000002383 133.0
SRD3_k127_3965629_12 metal cluster binding - - - 0.0000000000000000000000000006339 129.0
SRD3_k127_3965629_13 Belongs to the BolA IbaG family K05527 - - 0.0000000000000000002911 98.0
SRD3_k127_3965629_2 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 4.357e-199 632.0
SRD3_k127_3965629_3 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0003674,GO:0003824,GO:0004642,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 614.0
SRD3_k127_3965629_4 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 547.0
SRD3_k127_3965629_5 Phenylacetic acid degradation protein PaaY K02617 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009902 287.0
SRD3_k127_3965629_6 peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000003161 241.0
SRD3_k127_3965629_7 N-acetylmuramoyl-L-alanine amidase (Family 2) K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000009177 246.0
SRD3_k127_3965629_8 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000006572 211.0
SRD3_k127_3965629_9 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000000002215 192.0
SRD3_k127_3966475_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1441.0
SRD3_k127_3966475_1 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1013.0
SRD3_k127_3966475_10 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 396.0
SRD3_k127_3966475_11 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 387.0
SRD3_k127_3966475_12 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 330.0
SRD3_k127_3966475_13 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 314.0
SRD3_k127_3966475_14 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 307.0
SRD3_k127_3966475_15 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 306.0
SRD3_k127_3966475_16 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007254 295.0
SRD3_k127_3966475_17 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009458 291.0
SRD3_k127_3966475_18 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 304.0
SRD3_k127_3966475_19 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 289.0
SRD3_k127_3966475_2 glutaminyl-tRNA K01886 - 6.1.1.18 1.339e-260 816.0
SRD3_k127_3966475_20 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001823 283.0
SRD3_k127_3966475_21 Pfam:PNPOx_C K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002243 276.0
SRD3_k127_3966475_22 Histidine kinase K05962 - 2.7.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002666 282.0
SRD3_k127_3966475_23 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005516 271.0
SRD3_k127_3966475_24 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000008145 261.0
SRD3_k127_3966475_25 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001512 269.0
SRD3_k127_3966475_26 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000003042 255.0
SRD3_k127_3966475_27 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000002194 232.0
SRD3_k127_3966475_28 UPF0056 inner membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000000000003957 211.0
SRD3_k127_3966475_29 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000129 226.0
SRD3_k127_3966475_3 Peptidase dimerisation domain - - - 6.579e-223 696.0
SRD3_k127_3966475_30 - - - - 0.00000000000000000000000000000000000000000000000000000000258 208.0
SRD3_k127_3966475_31 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000001652 200.0
SRD3_k127_3966475_32 Cytochrome B561 K12262 - - 0.000000000000000000000000000000000000000000000000000781 191.0
SRD3_k127_3966475_33 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000005658 189.0
SRD3_k127_3966475_34 UPF0761 membrane protein K07058 - - 0.00000000000000000000000000000000000000000002329 172.0
SRD3_k127_3966475_35 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000001344 165.0
SRD3_k127_3966475_36 SWI complex, BAF60b domains - - - 0.00000000000000000000000000000000000005881 148.0
SRD3_k127_3966475_37 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000000000000000000542 146.0
SRD3_k127_3966475_38 - - - - 0.00000000000000000000000000000001435 130.0
SRD3_k127_3966475_39 Belongs to the UPF0337 (CsbD) family - - - 0.00000000000000000000000002716 110.0
SRD3_k127_3966475_4 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042 615.0
SRD3_k127_3966475_40 Cytochrome c - - - 0.0000000000000000000000009538 111.0
SRD3_k127_3966475_41 Response regulator receiver - - - 0.00000000000000000000004255 105.0
SRD3_k127_3966475_42 Trm112p-like protein K09791 - - 0.0000000000000000801 83.0
SRD3_k127_3966475_43 UPF0391 membrane protein - - - 0.00000000000002002 74.0
SRD3_k127_3966475_44 response to toxic substance K16347,K16348 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000003242 53.0
SRD3_k127_3966475_45 Bacterial protein of unknown function (DUF883) - - - 0.00002573 54.0
SRD3_k127_3966475_46 Protein of unknown function (DUF1328) - - - 0.0003627 47.0
SRD3_k127_3966475_5 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007173 601.0
SRD3_k127_3966475_6 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009266 582.0
SRD3_k127_3966475_7 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007153 522.0
SRD3_k127_3966475_8 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007735 432.0
SRD3_k127_3966475_9 Exonuclease VII, large subunit K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 408.0
SRD3_k127_4020419_0 Belongs to the CarB family K01955 - 6.3.5.5 2.145e-195 620.0
SRD3_k127_4020419_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006415 547.0
SRD3_k127_4020419_2 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 518.0
SRD3_k127_4020419_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 315.0
SRD3_k127_4020419_4 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003795 245.0
SRD3_k127_4020419_5 SmpA / OmlA family K06186 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0030674,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042221,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045203,GO:0045229,GO:0046677,GO:0050896,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0060090,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.000000000000000000001162 102.0
SRD3_k127_4055731_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1409.0
SRD3_k127_4055731_1 Belongs to the TPP enzyme family K01577 - 4.1.1.8 1.013e-300 930.0
SRD3_k127_4055731_2 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K00122 - 1.17.1.9 6.206e-263 820.0
SRD3_k127_4055731_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 520.0
SRD3_k127_4055731_4 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 329.0
SRD3_k127_4055731_5 EVE domain - - - 0.0000000000000000000000000000000000000000000000000000000000001255 218.0
SRD3_k127_4055731_6 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000001409 169.0
SRD3_k127_4055731_7 cheY-homologous receiver domain K11443 - - 0.00000000000000001249 85.0
SRD3_k127_4078517_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1343.0
SRD3_k127_4078517_1 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component K02004 - - 1.227e-215 696.0
SRD3_k127_4078517_10 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 375.0
SRD3_k127_4078517_11 phenazine biosynthesis phzc phzf - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 352.0
SRD3_k127_4078517_12 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 338.0
SRD3_k127_4078517_13 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 332.0
SRD3_k127_4078517_14 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 333.0
SRD3_k127_4078517_15 cobalamin biosynthetic process K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007146 320.0
SRD3_k127_4078517_16 NlpB/DapX lipoprotein K07287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 325.0
SRD3_k127_4078517_17 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 315.0
SRD3_k127_4078517_18 abc transporter atp-binding protein K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 304.0
SRD3_k127_4078517_19 PFAM binding-protein-dependent transport systems inner membrane component K05773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006595 299.0
SRD3_k127_4078517_2 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 552.0
SRD3_k127_4078517_20 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 306.0
SRD3_k127_4078517_21 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 292.0
SRD3_k127_4078517_22 Inhibitor of apoptosis-promoting Bax1 K19416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003638 285.0
SRD3_k127_4078517_23 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000106 282.0
SRD3_k127_4078517_24 Voltage-dependent anion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001661 282.0
SRD3_k127_4078517_25 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001998 284.0
SRD3_k127_4078517_26 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002929 266.0
SRD3_k127_4078517_27 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000005585 247.0
SRD3_k127_4078517_28 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000001453 241.0
SRD3_k127_4078517_29 PFAM ABC transporter related K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000002122 252.0
SRD3_k127_4078517_3 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 526.0
SRD3_k127_4078517_30 sodium ABC transporter, permease K09696 - - 0.00000000000000000000000000000000000000000000000000000000000000001913 247.0
SRD3_k127_4078517_31 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000002046 226.0
SRD3_k127_4078517_32 TPM domain K06872 - - 0.000000000000000000000000000000000000000000000000000000000009736 219.0
SRD3_k127_4078517_33 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000003984 196.0
SRD3_k127_4078517_34 Glycoprotease family K14742 - - 0.000000000000000000000000000000000000000000000000002169 190.0
SRD3_k127_4078517_35 TPM domain K08988 - - 0.0000000000000000000000000000000000000000001828 182.0
SRD3_k127_4078517_36 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.0000000000000000000000000002377 121.0
SRD3_k127_4078517_37 Psort location CytoplasmicMembrane, score K02237 - - 0.000000000000000000001808 98.0
SRD3_k127_4078517_38 - - - - 0.0000000000000003909 88.0
SRD3_k127_4078517_39 Protein of unknown function (DUF2970) - - - 0.0000000004472 65.0
SRD3_k127_4078517_4 Pyridoxal-phosphate dependent enzyme K12339 GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 473.0
SRD3_k127_4078517_40 - - - - 0.000000001864 67.0
SRD3_k127_4078517_41 Type VI secretion system effector K06887,K11903 - - 0.000000002371 66.0
SRD3_k127_4078517_43 Periplasmic binding protein K02016 - - 0.0000001086 55.0
SRD3_k127_4078517_5 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 428.0
SRD3_k127_4078517_6 Bacterial extracellular solute-binding protein K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 404.0
SRD3_k127_4078517_7 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 392.0
SRD3_k127_4078517_8 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 390.0
SRD3_k127_4078517_9 Rhodanese Homology Domain K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054 386.0
SRD3_k127_4120945_0 Benzoate-CoA ligase family K04110 - 6.2.1.25 2.011e-227 719.0
SRD3_k127_4120945_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 596.0
SRD3_k127_4120945_10 His Kinase A (phosphoacceptor) domain - - - 0.00000000000005211 74.0
SRD3_k127_4120945_2 CoA-binding domain protein K09181 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 520.0
SRD3_k127_4120945_3 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 353.0
SRD3_k127_4120945_4 Family of unknown function (DUF1028) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000419 267.0
SRD3_k127_4120945_5 dehydratase - - - 0.00000000000000000000000000000000000000000000000002469 186.0
SRD3_k127_4120945_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000114 177.0
SRD3_k127_4120945_7 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000009612 170.0
SRD3_k127_4120945_8 Domain of unknown function (DUF4142) - - - 0.00000000000000000000000000000000000000005434 162.0
SRD3_k127_4120945_9 Uncharacterized protein conserved in bacteria (DUF2141) - - - 0.00000000000000000000000587 103.0
SRD3_k127_4193031_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0017076,GO:0017111,GO:0019001,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046906,GO:0047727,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564 5.4.99.13 0.0 1637.0
SRD3_k127_4193031_1 efflux pump K18138,K18146 - - 0.0 1418.0
SRD3_k127_4193031_10 Phospholipase D Transphosphatidylase K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 573.0
SRD3_k127_4193031_11 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008449 537.0
SRD3_k127_4193031_12 Belongs to the binding-protein-dependent transport system permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 483.0
SRD3_k127_4193031_13 PFAM oxidoreductase domain protein K00010 - 1.1.1.18,1.1.1.369 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 475.0
SRD3_k127_4193031_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007968 482.0
SRD3_k127_4193031_15 Xylose isomerase K03335 - 4.2.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 451.0
SRD3_k127_4193031_16 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 473.0
SRD3_k127_4193031_17 branched-chain amino acid K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005806 440.0
SRD3_k127_4193031_18 CHASE2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 448.0
SRD3_k127_4193031_19 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000694 421.0
SRD3_k127_4193031_2 AMP-binding enzyme K01897 - 6.2.1.3 6.665e-296 920.0
SRD3_k127_4193031_20 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 405.0
SRD3_k127_4193031_21 Oxidoreductase family, C-terminal alpha/beta domain K00010 - 1.1.1.18,1.1.1.369 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 406.0
SRD3_k127_4193031_22 Dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005211 406.0
SRD3_k127_4193031_23 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 383.0
SRD3_k127_4193031_24 PFAM Myo-inositol catabolism IolB domain protein K03337 - 5.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 396.0
SRD3_k127_4193031_25 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009602 387.0
SRD3_k127_4193031_26 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 394.0
SRD3_k127_4193031_27 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 368.0
SRD3_k127_4193031_28 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 360.0
SRD3_k127_4193031_29 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 333.0
SRD3_k127_4193031_3 PfkB domain protein K03338 - 2.7.1.92 1.691e-290 904.0
SRD3_k127_4193031_30 Nucleotidyl transferase of unknown function (DUF2204) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 328.0
SRD3_k127_4193031_31 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 333.0
SRD3_k127_4193031_32 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 325.0
SRD3_k127_4193031_33 EamA-like transporter family K15268 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004582 271.0
SRD3_k127_4193031_34 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000191 267.0
SRD3_k127_4193031_35 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000001684 239.0
SRD3_k127_4193031_36 CreA protein K05805 - - 0.000000000000000000000000000000000000000000000000000000000000004497 227.0
SRD3_k127_4193031_37 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000006675 220.0
SRD3_k127_4193031_38 MgtC family K07507 - - 0.00000000000000000000000000000000000000000000003909 178.0
SRD3_k127_4193031_39 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000004362 176.0
SRD3_k127_4193031_4 Belongs to the TPP enzyme family K03336 - 3.7.1.22 3.635e-276 861.0
SRD3_k127_4193031_40 B12 binding domain K01849 GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016853,GO:0016866,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0036094,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046906,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:1901135,GO:1901360,GO:1901363,GO:1901564 5.4.99.2 0.00000000000000000000000000000000000000000002116 179.0
SRD3_k127_4193031_41 inositol mono-phosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000006052 163.0
SRD3_k127_4193031_42 Protein of unknown function (DUF421) - - - 0.000000000000000000000000000000003049 138.0
SRD3_k127_4193031_43 Belongs to the ompA family - - - 0.000000000000000000000000000000006809 135.0
SRD3_k127_4193031_44 FecR protein - - - 0.000000000000000000000000000000009664 134.0
SRD3_k127_4193031_45 phenylacetic acid degradation protein paaD K02614 - - 0.00000000000000000000000000000003111 134.0
SRD3_k127_4193031_46 Domain of unknown function (DUF4440) - - - 0.00000000000000000000003181 104.0
SRD3_k127_4193031_47 - - - - 0.000000000000000000001711 103.0
SRD3_k127_4193031_48 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) - - - 0.000000000000000000006403 96.0
SRD3_k127_4193031_49 Transcriptional regulator - - - 0.000000000000000000989 89.0
SRD3_k127_4193031_5 Belongs to the peptidase M16 family K07263 - - 5.261e-254 813.0
SRD3_k127_4193031_50 STAS domain K06378 - - 0.000000000000000008983 88.0
SRD3_k127_4193031_52 - - - - 0.000000001835 66.0
SRD3_k127_4193031_53 - - - - 0.00000001594 62.0
SRD3_k127_4193031_54 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0002252 49.0
SRD3_k127_4193031_6 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 2.837e-231 737.0
SRD3_k127_4193031_7 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 4.679e-225 724.0
SRD3_k127_4193031_8 Periplasmic binding protein K01999 - - 8.773e-199 630.0
SRD3_k127_4193031_9 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 604.0
SRD3_k127_4284359_0 AMP-binding enzyme C-terminal domain K00666,K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 548.0
SRD3_k127_4284359_1 ABC transporter K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 460.0
SRD3_k127_4284359_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005387 457.0
SRD3_k127_4284359_3 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 419.0
SRD3_k127_4284359_4 Belongs to the HpcH HpaI aldolase family K01630,K02510 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0008150,GO:0008152,GO:0016829,GO:0016830,GO:0016832,GO:0044238,GO:0044424,GO:0044464,GO:0071704 4.1.2.20,4.1.2.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008553 310.0
SRD3_k127_4284359_5 Aldolase/RraA K02553,K10218 - 4.1.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000002388 250.0
SRD3_k127_4338325_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 0.0 1781.0
SRD3_k127_4338325_1 COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K04090 - 1.2.7.8 0.0 1555.0
SRD3_k127_4338325_10 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 368.0
SRD3_k127_4338325_11 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 379.0
SRD3_k127_4338325_12 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 373.0
SRD3_k127_4338325_13 Belongs to the hyi family K01816,K22131 - 5.3.1.22,5.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 357.0
SRD3_k127_4338325_14 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046 - 1.1.1.69 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007199 277.0
SRD3_k127_4338325_15 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002037 287.0
SRD3_k127_4338325_16 FR47-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003954 270.0
SRD3_k127_4338325_17 Activator of Hsp90 ATPase 1 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005875 256.0
SRD3_k127_4338325_18 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002607 273.0
SRD3_k127_4338325_19 Phospholipase/Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000002104 243.0
SRD3_k127_4338325_2 Histidine kinase-like ATPases - - - 2.804e-306 990.0
SRD3_k127_4338325_20 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000002546 234.0
SRD3_k127_4338325_21 Calcineurin-like phosphoesterase K06953 - - 0.000000000000000000000000000000000000000000000000000000000000002885 225.0
SRD3_k127_4338325_22 PFAM Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000001922 209.0
SRD3_k127_4338325_23 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000003528 198.0
SRD3_k127_4338325_24 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000004636 211.0
SRD3_k127_4338325_25 phosphonoacetaldehyde hydrolase activity K00817,K01560,K07025,K20866 - 2.6.1.9,3.1.3.10,3.8.1.2 0.0000000000000000000000000000000000000000000000000000218 194.0
SRD3_k127_4338325_26 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000006932 166.0
SRD3_k127_4338325_27 Histidine kinase K07673 - 2.7.13.3 0.00000000000000000000000000000000000000000009351 165.0
SRD3_k127_4338325_28 Transposase - - - 0.000000000000000000000000000000000000000007694 157.0
SRD3_k127_4338325_29 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000000001347 149.0
SRD3_k127_4338325_3 RNA secondary structure unwinding K03724 - - 1.026e-285 902.0
SRD3_k127_4338325_30 PFAM response regulator receiver K11443 - - 0.000000000000000000000000000000005902 136.0
SRD3_k127_4338325_31 Putative phosphatase (DUF442) - - - 0.000000000000000000000000000002584 123.0
SRD3_k127_4338325_32 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000000001689 113.0
SRD3_k127_4338325_33 PFAM Cupin 2, conserved barrel domain protein - - - 0.0000000000000000002219 91.0
SRD3_k127_4338325_34 - - - - 0.00000000000000000113 95.0
SRD3_k127_4338325_35 Protein of unknown function (DUF2442) - - - 0.0000000000000005664 85.0
SRD3_k127_4338325_36 Dienelactone hydrolase - - - 0.000000009825 67.0
SRD3_k127_4338325_37 Belongs to the 'phage' integrase family - - - 0.00000001923 62.0
SRD3_k127_4338325_4 Dehydrogenase K00101,K15054 - 1.1.2.3,1.1.99.31 4.417e-210 668.0
SRD3_k127_4338325_5 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 5.721e-203 638.0
SRD3_k127_4338325_6 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 567.0
SRD3_k127_4338325_7 phospholipase C K01114 - 3.1.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 491.0
SRD3_k127_4338325_8 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 442.0
SRD3_k127_4338325_9 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 433.0
SRD3_k127_434378_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 7.242e-273 853.0
SRD3_k127_434378_1 poly(R)-hydroxyalkanoic acid synthase K03821 - - 8.979e-257 807.0
SRD3_k127_434378_10 Soluble lytic murein transglycosylase L domain K08309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008103 480.0
SRD3_k127_434378_11 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 477.0
SRD3_k127_434378_12 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 443.0
SRD3_k127_434378_13 COG0119 Isopropylmalate homocitrate citramalate synthases K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006502 409.0
SRD3_k127_434378_14 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 415.0
SRD3_k127_434378_15 L-carnitine dehydratase bile acid-inducible protein F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006795 402.0
SRD3_k127_434378_16 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 348.0
SRD3_k127_434378_17 glycosyl transferase group 1 K02844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 354.0
SRD3_k127_434378_18 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 326.0
SRD3_k127_434378_19 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 329.0
SRD3_k127_434378_2 Biotin carboxylase C-terminal domain K01965,K01968,K13777 - 6.4.1.3,6.4.1.4,6.4.1.5 1.548e-226 725.0
SRD3_k127_434378_20 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 323.0
SRD3_k127_434378_21 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 310.0
SRD3_k127_434378_22 enoyl-CoA hydratase K13766 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 302.0
SRD3_k127_434378_23 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 294.0
SRD3_k127_434378_24 epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003997 286.0
SRD3_k127_434378_25 cell septum assembly - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000463 281.0
SRD3_k127_434378_26 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001352 259.0
SRD3_k127_434378_27 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002228 254.0
SRD3_k127_434378_28 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000003961 239.0
SRD3_k127_434378_29 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004294 247.0
SRD3_k127_434378_3 PFAM polysaccharide biosynthesis protein CapD - - - 1.87e-213 682.0
SRD3_k127_434378_30 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.000000000000000000000000000000000000000000000000000000000000000000006507 264.0
SRD3_k127_434378_31 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000581 222.0
SRD3_k127_434378_32 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000000000000000000003201 226.0
SRD3_k127_434378_33 Glycosyl transferase family 4 K13007 - - 0.00000000000000000000000000000000000000000000000000000002302 210.0
SRD3_k127_434378_34 Protein of unknown function (DUF4254) - - - 0.000000000000000000000000000000000000000000000000000001136 214.0
SRD3_k127_434378_35 Gram-negative porin - - - 0.00000000000000000000000000000000000000000000000000004237 201.0
SRD3_k127_434378_36 Thiol disulfide interchange protein K03673 - - 0.0000000000000000000000000000000000000000000003196 180.0
SRD3_k127_434378_37 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000001368 166.0
SRD3_k127_434378_38 Amino acid transporter K11250 - - 0.00000000000000000000000000000000000000000002579 171.0
SRD3_k127_434378_39 transcriptional - - - 0.00000000000000000000000000000009381 139.0
SRD3_k127_434378_4 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 1.98e-210 659.0
SRD3_k127_434378_40 Sporulation related domain - - - 0.000000000000000000000000008565 120.0
SRD3_k127_434378_41 O-antigen ligase K02847 - - 0.00000000000000000000000001034 128.0
SRD3_k127_434378_42 protein conserved in bacteria K09984 - - 0.0000000000000003875 80.0
SRD3_k127_434378_43 Protein of unknown function (DUF1289) K06938 - - 0.00000000000001085 81.0
SRD3_k127_434378_44 - - - - 0.000000000001744 71.0
SRD3_k127_434378_45 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.000002281 53.0
SRD3_k127_434378_5 Arginyl-tRNA synthetase K01887 - 6.1.1.19 3.68e-202 650.0
SRD3_k127_434378_6 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 579.0
SRD3_k127_434378_7 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K02021,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 576.0
SRD3_k127_434378_8 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008569 545.0
SRD3_k127_434378_9 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008081 516.0
SRD3_k127_4400110_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006487 516.0
SRD3_k127_4400110_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005998 351.0
SRD3_k127_4400110_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000001553 222.0
SRD3_k127_4400110_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000001557 221.0
SRD3_k127_4400110_4 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000004738 160.0
SRD3_k127_4400110_5 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000001829 123.0
SRD3_k127_4607146_0 AcyL-CoA dehydrogenase K06445 - - 3.404e-316 1006.0
SRD3_k127_4607146_1 RecQ zinc-binding K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 544.0
SRD3_k127_4607146_10 polyhydroxyalkanoic acid - - - 0.000000000003812 74.0
SRD3_k127_4607146_2 PAP2 superfamily K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 527.0
SRD3_k127_4607146_3 B12 binding domain K22491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 304.0
SRD3_k127_4607146_4 Amino acid ABC transporter substrate-binding protein K10001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008507 274.0
SRD3_k127_4607146_5 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000001041 229.0
SRD3_k127_4607146_6 Glutathione peroxidase K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000003119 223.0
SRD3_k127_4607146_7 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.000000000000000000000000000000000000000008063 155.0
SRD3_k127_4607146_8 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000006699 156.0
SRD3_k127_4607146_9 PGAP1-like protein - - - 0.000000000000000000000000000000000000014 162.0
SRD3_k127_4657273_0 DEAD/H associated K03724 - - 0.0 1730.0
SRD3_k127_4657273_1 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 385.0
SRD3_k127_4657273_10 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000003623 247.0
SRD3_k127_4657273_11 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000001757 226.0
SRD3_k127_4657273_12 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000000000000000000000000001217 212.0
SRD3_k127_4657273_13 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.00000000000000000000000000000000000000000000000000000000002635 209.0
SRD3_k127_4657273_14 InterPro IPR014922 - - - 0.00000000000000000000000000000000000000000000000000000005845 199.0
SRD3_k127_4657273_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000002406 190.0
SRD3_k127_4657273_16 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.0000000000000000000000000000000000000000000000003473 187.0
SRD3_k127_4657273_17 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000006526 177.0
SRD3_k127_4657273_18 - - - - 0.000000000000000000000000000000000000000002073 159.0
SRD3_k127_4657273_19 PFAM LmbE family protein - - - 0.000000000000000000000000000000000000000002987 171.0
SRD3_k127_4657273_2 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 328.0
SRD3_k127_4657273_20 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000000000000005272 153.0
SRD3_k127_4657273_21 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000001418 139.0
SRD3_k127_4657273_22 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000002785 129.0
SRD3_k127_4657273_23 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000357 136.0
SRD3_k127_4657273_24 - - - - 0.00000000000000000000000000005714 120.0
SRD3_k127_4657273_25 - - - - 0.00000000000000000000000005336 114.0
SRD3_k127_4657273_26 Glyoxalase-like domain K01759,K08234 - 4.4.1.5 0.0000000000000000000000001919 111.0
SRD3_k127_4657273_27 - - - - 0.0000000000000000009019 100.0
SRD3_k127_4657273_28 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) - - - 0.000000000000000001465 89.0
SRD3_k127_4657273_29 PFAM GCN5-related N-acetyltransferase K00657,K03790 - 2.3.1.128,2.3.1.57 0.000000000000004287 83.0
SRD3_k127_4657273_3 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 300.0
SRD3_k127_4657273_30 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00003237 53.0
SRD3_k127_4657273_31 Transposase K07486 - - 0.0004488 47.0
SRD3_k127_4657273_4 OpgC protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009229 306.0
SRD3_k127_4657273_5 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 303.0
SRD3_k127_4657273_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 292.0
SRD3_k127_4657273_7 Maltose acetyltransferase K00661,K03818 - 2.3.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006862 271.0
SRD3_k127_4657273_8 Glycosyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007473 271.0
SRD3_k127_4657273_9 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002084 257.0
SRD3_k127_4711449_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0 1203.0
SRD3_k127_4711449_1 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0 1155.0
SRD3_k127_4711449_10 PUA-like domain K00958 - 2.7.7.4 6.794e-202 634.0
SRD3_k127_4711449_11 Thiolase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 575.0
SRD3_k127_4711449_12 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 567.0
SRD3_k127_4711449_13 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 554.0
SRD3_k127_4711449_14 H( )-stimulated, divalent metal cation uptake system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000693 551.0
SRD3_k127_4711449_15 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 544.0
SRD3_k127_4711449_16 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007494 556.0
SRD3_k127_4711449_17 AMP-binding enzyme C-terminal domain K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009739 531.0
SRD3_k127_4711449_18 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 511.0
SRD3_k127_4711449_19 PFAM alanine racemase domain protein K20757 - 4.3.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008187 543.0
SRD3_k127_4711449_2 PFAM NADH flavin oxidoreductase NADH oxidase K00219,K09461 - 1.14.13.40,1.3.1.34 0.0 1125.0
SRD3_k127_4711449_20 PQQ-like domain K00114 - 1.1.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 476.0
SRD3_k127_4711449_21 RimK-like ATPgrasp N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 456.0
SRD3_k127_4711449_22 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004997 390.0
SRD3_k127_4711449_23 HhH-GPD superfamily base excision DNA repair protein K01247,K13529 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009881 386.0
SRD3_k127_4711449_24 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007122 374.0
SRD3_k127_4711449_25 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009207 362.0
SRD3_k127_4711449_26 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 362.0
SRD3_k127_4711449_27 2-hydroxyglutaryl-CoA dehydratase, D-component K04113 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006316 341.0
SRD3_k127_4711449_28 protein involved in response to NO K07234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007432 344.0
SRD3_k127_4711449_29 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005395 324.0
SRD3_k127_4711449_3 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 2.519e-313 994.0
SRD3_k127_4711449_30 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 305.0
SRD3_k127_4711449_31 Belongs to the heme-copper respiratory oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009158 283.0
SRD3_k127_4711449_32 helix_turn_helix, Lux Regulon K14979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006581 270.0
SRD3_k127_4711449_33 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007227 273.0
SRD3_k127_4711449_34 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000006513 271.0
SRD3_k127_4711449_35 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006262 268.0
SRD3_k127_4711449_36 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007611 255.0
SRD3_k127_4711449_37 Belongs to the short-chain dehydrogenases reductases (SDR) family K00019,K07535 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000002298 258.0
SRD3_k127_4711449_38 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001066 268.0
SRD3_k127_4711449_39 BadF/BadG/BcrA/BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000001304 237.0
SRD3_k127_4711449_4 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 1.74e-307 964.0
SRD3_k127_4711449_40 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000000000000000000000000000000000000000000000003702 229.0
SRD3_k127_4711449_41 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000017 223.0
SRD3_k127_4711449_42 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000007057 220.0
SRD3_k127_4711449_43 - - - - 0.00000000000000000000000000000000000000000000000000000002076 201.0
SRD3_k127_4711449_44 B12 binding domain K01849,K20907 - 5.4.99.2,5.4.99.64 0.0000000000000000000000000000000000000000000000000000162 193.0
SRD3_k127_4711449_45 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000002531 181.0
SRD3_k127_4711449_46 PFAM 2Fe-2S -binding K03518,K13483 - 1.2.5.3 0.0000000000000000000000000000000000000000000000004725 179.0
SRD3_k127_4711449_47 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000007519 183.0
SRD3_k127_4711449_48 Beta/gamma crystallins - - - 0.000000000000000000000000000000000000000000000111 181.0
SRD3_k127_4711449_49 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000000002628 171.0
SRD3_k127_4711449_5 4-hydroxyphenylacetate 3-hydroxylase C terminal K00483,K14534 - 1.14.14.9,4.2.1.120,5.3.3.3 5.311e-290 908.0
SRD3_k127_4711449_50 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000008522 181.0
SRD3_k127_4711449_51 Histidine kinase - - - 0.000000000000000000000000000000000000000001039 171.0
SRD3_k127_4711449_52 helix_turn_helix, arabinose operon control protein K07506 - - 0.00000000000000000000000000000000000000002911 164.0
SRD3_k127_4711449_53 GntR family - - - 0.00000000000000000000000000000000000000004336 173.0
SRD3_k127_4711449_54 heme oxygenase (decyclizing) activity K07145,K21481 - 1.14.99.48,1.14.99.57 0.000000000000000000000000000000000000001799 151.0
SRD3_k127_4711449_55 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000628 147.0
SRD3_k127_4711449_56 - - - - 0.0000000000000000000000000000001002 127.0
SRD3_k127_4711449_57 Rnk N-terminus K06140 - - 0.0000000000000000000001162 103.0
SRD3_k127_4711449_58 - - - - 0.000000000000000002026 87.0
SRD3_k127_4711449_59 Bacterial periplasmic substrate-binding proteins - - - 0.00000000000000001838 93.0
SRD3_k127_4711449_6 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 6.043e-283 885.0
SRD3_k127_4711449_60 Copper binding proteins, plastocyanin/azurin family - - - 0.000000000000001068 83.0
SRD3_k127_4711449_63 - - - - 0.000000000004007 69.0
SRD3_k127_4711449_64 Hexameric tyrosine-coordinated heme protein (HTHP) - - - 0.00000000008397 64.0
SRD3_k127_4711449_65 Evidence 5 No homology to any previously reported sequences K07156,K07245,K14166 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000007292 71.0
SRD3_k127_4711449_66 Rieske-like [2Fe-2S] domain K05710 - - 0.000000004256 66.0
SRD3_k127_4711449_67 reductase beta subunit K00395 - 1.8.99.2 0.000001835 49.0
SRD3_k127_4711449_68 PFAM blue (type 1) copper domain protein - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0006472 48.0
SRD3_k127_4711449_7 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly - - - 1.784e-262 826.0
SRD3_k127_4711449_8 AMP-binding enzyme C-terminal domain K08295 - 6.2.1.32 7.708e-232 740.0
SRD3_k127_4711449_9 AMP-binding enzyme C-terminal domain - - - 3.509e-212 671.0
SRD3_k127_4714745_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1020.0
SRD3_k127_4714745_1 Isocitrate lyase K01637 - 4.1.3.1 5.299e-239 747.0
SRD3_k127_4714745_2 Sulfide dehydrogenase K05301,K17218 - 1.8.2.1,1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 510.0
SRD3_k127_4714745_3 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 387.0
SRD3_k127_4714745_4 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 367.0
SRD3_k127_4714745_5 Zinc metalloprotease (Elastase) K01186,K05994,K21449 - 3.2.1.18,3.4.11.10 0.000000000000000000000000000002668 139.0
SRD3_k127_4714745_6 Adenylate cyclase - - - 0.000000000000000001022 98.0
SRD3_k127_4714745_7 cytochrome - - - 0.000000000000003016 79.0
SRD3_k127_4714745_8 involved in signal transduction (via phosphorylation) involved in transcriptional regulatory mechanism and in the regulation of secondary metabolites catalytic activity ATP a protein ADP a phosphoprotein - - - 0.00000007703 64.0
SRD3_k127_4714745_9 Domain of unknown function (DUF4114) K20276 - - 0.0005135 50.0
SRD3_k127_4759345_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1226.0
SRD3_k127_4759345_1 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000001482 226.0
SRD3_k127_4759345_2 Protein conserved in bacteria - - - 0.0002371 51.0
SRD3_k127_4761534_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1255.0
SRD3_k127_4761534_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1092.0
SRD3_k127_4761534_10 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000001367 201.0
SRD3_k127_4761534_11 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000004415 177.0
SRD3_k127_4761534_12 DsrE/DsrF-like family - - - 0.0000000000000000000000000000000000000000008712 161.0
SRD3_k127_4761534_13 Psort location CytoplasmicMembrane, score 9.46 - - - 0.00000000000000000000000007606 118.0
SRD3_k127_4761534_14 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000213 53.0
SRD3_k127_4761534_2 AAA ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006337 610.0
SRD3_k127_4761534_3 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 402.0
SRD3_k127_4761534_4 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009808 383.0
SRD3_k127_4761534_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 328.0
SRD3_k127_4761534_6 PFAM phospholipase A1 K01058 - 3.1.1.32,3.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000001526 278.0
SRD3_k127_4761534_7 inositol monophosphatase K01092,K05602 - 3.1.3.15,3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000002023 275.0
SRD3_k127_4761534_8 COG0451 Nucleoside-diphosphate-sugar epimerases K05281 - 1.3.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000001985 265.0
SRD3_k127_4761534_9 Belongs to the UPF0502 family K09915 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002029 252.0
SRD3_k127_4773659_0 FAD binding domain K18071 - 1.14.12.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009449 406.0
SRD3_k127_4773659_1 dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005794 353.0
SRD3_k127_4773659_10 Predicted membrane protein (DUF2231) - - - 0.0000001646 54.0
SRD3_k127_4773659_2 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009967 349.0
SRD3_k127_4773659_3 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 358.0
SRD3_k127_4773659_4 Serine aminopeptidase, S33 K18614 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009111,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0034641,GO:0042365,GO:0042737,GO:0042802,GO:0042803,GO:0042816,GO:0042820,GO:0044237,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046483,GO:0046700,GO:0046983,GO:0047411,GO:0071704,GO:0072524,GO:0072526,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000002252 251.0
SRD3_k127_4773659_5 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000001131 242.0
SRD3_k127_4773659_6 ABC transporter (Permease) K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000002598 248.0
SRD3_k127_4773659_7 alpha/beta hydrolase fold K01432 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000002272 220.0
SRD3_k127_4773659_8 FCD - - - 0.000000000000000000000000000000000000000000000000000000000001325 217.0
SRD3_k127_4773659_9 Amino acid synthesis - - - 0.00000000000000000000000000000000000000000000000000000000002767 216.0
SRD3_k127_4774584_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 3.301e-261 820.0
SRD3_k127_4774584_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 2.741e-211 666.0
SRD3_k127_4774584_10 Phosphoenolpyruvate phosphomutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009166 395.0
SRD3_k127_4774584_11 NUDIX domain K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009826 379.0
SRD3_k127_4774584_12 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 352.0
SRD3_k127_4774584_13 Belongs to the peptidase S1C family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 349.0
SRD3_k127_4774584_14 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 335.0
SRD3_k127_4774584_15 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001003 285.0
SRD3_k127_4774584_16 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003429 263.0
SRD3_k127_4774584_17 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008547 258.0
SRD3_k127_4774584_18 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000000000000000000000000105 243.0
SRD3_k127_4774584_19 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000000006653 191.0
SRD3_k127_4774584_2 Rod shape-determining protein MreB K03569 - - 1.036e-195 613.0
SRD3_k127_4774584_20 OsmC-like protein K04063 - - 0.00000000000000000000000000000000000000000000000002919 199.0
SRD3_k127_4774584_21 PFAM OsmC family protein - - - 0.00000000000000000000000000000000000000000000000004292 190.0
SRD3_k127_4774584_22 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000001013 186.0
SRD3_k127_4774584_23 shape-determining protein MreD K03571 - - 0.000000000000000000000000000000000000001732 158.0
SRD3_k127_4774584_24 type IV pilus modification protein PilV K02671 - - 0.000000000000000000000000000000000000876 149.0
SRD3_k127_4774584_25 YCII-related domain K09780 - - 0.000000000000000000000000000000000003309 141.0
SRD3_k127_4774584_26 Protein of unknown function (DUF1178) - - - 0.0000000000000000000000000000000008621 136.0
SRD3_k127_4774584_27 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000001099 112.0
SRD3_k127_4774584_28 Prokaryotic N-terminal methylation motif K02655 - - 0.00000000000000000000004894 103.0
SRD3_k127_4774584_29 protein transport across the cell outer membrane K08084 - - 0.000000000000000000006394 100.0
SRD3_k127_4774584_3 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 539.0
SRD3_k127_4774584_30 HNH endonuclease K07451 - - 0.0000000000000000009074 94.0
SRD3_k127_4774584_31 Cupin 2, conserved barrel domain protein - - - 0.000000000000000001596 91.0
SRD3_k127_4774584_32 Type IV Pilus-assembly protein W K02672 - - 0.0000000000004929 73.0
SRD3_k127_4774584_33 - - - - 0.000000000002127 71.0
SRD3_k127_4774584_34 Methionine biosynthesis protein MetW - - - 0.0000000001926 72.0
SRD3_k127_4774584_4 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 509.0
SRD3_k127_4774584_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006382 496.0
SRD3_k127_4774584_6 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 448.0
SRD3_k127_4774584_7 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009983 439.0
SRD3_k127_4774584_8 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 445.0
SRD3_k127_4774584_9 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092 423.0
SRD3_k127_4804686_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 3.071e-203 646.0
SRD3_k127_4804686_1 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007902 584.0
SRD3_k127_4804686_10 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000002175 200.0
SRD3_k127_4804686_11 PFAM Phosphoribosyltransferase - - - 0.0000000000000000000000000000000000000000000004179 179.0
SRD3_k127_4804686_12 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.000000000000000000000000000000000000000000944 167.0
SRD3_k127_4804686_13 Bacterial SH3 domain - - - 0.000000000000000000000000000000002471 138.0
SRD3_k127_4804686_14 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000000005759 123.0
SRD3_k127_4804686_15 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.00000000000000000000000001944 115.0
SRD3_k127_4804686_16 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.00000000000000000000000007033 109.0
SRD3_k127_4804686_17 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000001327 106.0
SRD3_k127_4804686_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 545.0
SRD3_k127_4804686_3 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 474.0
SRD3_k127_4804686_4 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 437.0
SRD3_k127_4804686_5 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 397.0
SRD3_k127_4804686_6 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009322 332.0
SRD3_k127_4804686_7 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000118 287.0
SRD3_k127_4804686_8 The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters K02170 - 3.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000002269 236.0
SRD3_k127_4804686_9 Bacterial regulatory proteins, tetR family K05501 - - 0.00000000000000000000000000000000000000000000000000000000000000001382 244.0
SRD3_k127_4827918_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K18361 - 1.17.5.1,3.1.2.25 0.0 1255.0
SRD3_k127_4827918_1 nitric oxide reductase K04561 - 1.7.2.5 0.0 1184.0
SRD3_k127_4827918_10 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 467.0
SRD3_k127_4827918_11 PFAM ATP dependent DNA ligase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009377 443.0
SRD3_k127_4827918_12 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 430.0
SRD3_k127_4827918_13 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005444 431.0
SRD3_k127_4827918_14 COG1024 Enoyl-CoA hydratase carnithine racemase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005481 419.0
SRD3_k127_4827918_15 DNA polymerase LigD polymerase domain K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 421.0
SRD3_k127_4827918_16 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 396.0
SRD3_k127_4827918_17 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 364.0
SRD3_k127_4827918_18 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K04109,K11178 - 1.17.1.4,1.3.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 358.0
SRD3_k127_4827918_19 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 340.0
SRD3_k127_4827918_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1066.0
SRD3_k127_4827918_20 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007743 336.0
SRD3_k127_4827918_21 4Fe-4S binding domain K18362 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007973 337.0
SRD3_k127_4827918_22 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 332.0
SRD3_k127_4827918_23 Phytanoyl-CoA dioxygenase (PhyH) K10674 - 1.14.11.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005426 316.0
SRD3_k127_4827918_24 indolepyruvate oxidoreductase subunit B K00180 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005782 327.0
SRD3_k127_4827918_25 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 312.0
SRD3_k127_4827918_26 phosphate acetyltransferase K00625 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 315.0
SRD3_k127_4827918_27 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006492 314.0
SRD3_k127_4827918_28 KR domain K07535 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 295.0
SRD3_k127_4827918_29 branched-chain amino acid K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 287.0
SRD3_k127_4827918_3 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520,K04108 - 1.2.5.3,1.3.7.9 1.13e-317 999.0
SRD3_k127_4827918_30 Belongs to the heme-copper respiratory oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002341 282.0
SRD3_k127_4827918_31 branched-chain amino acid transport K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001697 260.0
SRD3_k127_4827918_32 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000001258 237.0
SRD3_k127_4827918_33 [2Fe-2S] binding domain K04107 - 1.3.7.9 0.00000000000000000000000000000000000000000000000000000000007266 227.0
SRD3_k127_4827918_34 Thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000000000000000000005676 191.0
SRD3_k127_4827918_35 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000002955 196.0
SRD3_k127_4827918_36 Transcriptional regulator K13771 - - 0.000000000000000000000000000000000000000000001659 169.0
SRD3_k127_4827918_37 DMSO reductase anchor subunit (DmsC) K18363 - - 0.0000000000000000000000000000000000000000000435 179.0
SRD3_k127_4827918_38 Thioesterase - - - 0.00000000000000000000000000000000000000008126 164.0
SRD3_k127_4827918_39 Invasion gene expression up-regulator SirB - - - 0.000000000000000000000000000000000000001158 159.0
SRD3_k127_4827918_4 Indolepyruvate ferredoxin oxidoreductase K00179 - 1.2.7.8 2.378e-279 876.0
SRD3_k127_4827918_40 transcriptional regulator - - - 0.000000000000000000000000000000000000002591 158.0
SRD3_k127_4827918_41 Hsp20/alpha crystallin family - - - 0.000000000000000000000000000000000001091 142.0
SRD3_k127_4827918_42 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000007509 104.0
SRD3_k127_4827918_43 Uncharacterized conserved protein (DUF2249) - - - 0.00000000000000002455 95.0
SRD3_k127_4827918_5 SpoVR like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 609.0
SRD3_k127_4827918_6 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 591.0
SRD3_k127_4827918_7 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 566.0
SRD3_k127_4827918_8 Belongs to the citrate synthase family K01647,K01659 - 2.3.3.1,2.3.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006649 561.0
SRD3_k127_4827918_9 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 505.0
SRD3_k127_485259_0 D-galactarate dehydratase Altronate hydrolase, C terminus K01685,K01708,K16846 - 4.2.1.42,4.2.1.7,4.4.1.24 2.46e-219 685.0
SRD3_k127_485259_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 488.0
SRD3_k127_485259_10 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000735 229.0
SRD3_k127_485259_11 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000005029 208.0
SRD3_k127_485259_12 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000002604 200.0
SRD3_k127_485259_13 Glycosyl Transferase - - - 0.00000000000000000000000000000000000000000000000005379 192.0
SRD3_k127_485259_14 EthD domain - - - 0.00000000000000000000000001052 112.0
SRD3_k127_485259_15 SAF - - - 0.000000000003925 72.0
SRD3_k127_485259_16 Major Facilitator Superfamily - - - 0.0000000002349 73.0
SRD3_k127_485259_17 Putative diguanylate phosphodiesterase - - - 0.0002624 53.0
SRD3_k127_485259_2 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000308 448.0
SRD3_k127_485259_3 Belongs to the LDH2 MDH2 oxidoreductase family K16844 - 1.1.1.338 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 440.0
SRD3_k127_485259_4 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 426.0
SRD3_k127_485259_5 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004851 394.0
SRD3_k127_485259_6 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058,K16843 - 1.1.1.310,1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 388.0
SRD3_k127_485259_7 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004422 366.0
SRD3_k127_485259_8 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000005307 280.0
SRD3_k127_485259_9 UTRA K03710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005677 258.0
SRD3_k127_48768_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1302.0
SRD3_k127_48768_1 Choline dehydrogenase and related flavoproteins K06151 - 1.1.99.3 1.375e-316 981.0
SRD3_k127_48768_10 PFAM Aminotransferase class I and II K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003129 497.0
SRD3_k127_48768_11 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009418 474.0
SRD3_k127_48768_12 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 480.0
SRD3_k127_48768_13 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006520,GO:0006553,GO:0006563,GO:0006564,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009085,GO:0009089,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019752,GO:0019842,GO:0030170,GO:0033359,GO:0034641,GO:0036094,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046394,GO:0046451,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901615,GO:1901617 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005064 473.0
SRD3_k127_48768_14 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 468.0
SRD3_k127_48768_15 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004149 458.0
SRD3_k127_48768_16 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 456.0
SRD3_k127_48768_17 twitching motility protein K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 453.0
SRD3_k127_48768_18 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 449.0
SRD3_k127_48768_19 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000592 432.0
SRD3_k127_48768_2 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 5.905e-295 936.0
SRD3_k127_48768_20 COG2010 Cytochrome c, mono- and diheme variants - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 455.0
SRD3_k127_48768_21 Belongs to the class I fructose-bisphosphate aldolase family K01623 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 424.0
SRD3_k127_48768_22 Aminotransferase class I and II K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 441.0
SRD3_k127_48768_23 Methionine aminopeptidase K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 419.0
SRD3_k127_48768_24 chorismate mutase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 421.0
SRD3_k127_48768_25 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009962 428.0
SRD3_k127_48768_26 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 399.0
SRD3_k127_48768_27 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 409.0
SRD3_k127_48768_28 dioxygenase K15777 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0046566,GO:0051213,GO:0055114 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 394.0
SRD3_k127_48768_29 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 351.0
SRD3_k127_48768_3 Belongs to the TPP enzyme family K01652 - 2.2.1.6 2.72e-203 646.0
SRD3_k127_48768_30 ABC-type branched-chain amino acid transport K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 339.0
SRD3_k127_48768_31 abc transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 346.0
SRD3_k127_48768_32 Major facilitator superfamily K08224 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 337.0
SRD3_k127_48768_33 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 324.0
SRD3_k127_48768_34 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 314.0
SRD3_k127_48768_35 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 330.0
SRD3_k127_48768_36 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002018 289.0
SRD3_k127_48768_37 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002612 280.0
SRD3_k127_48768_38 Gluconate 2-dehydrogenase subunit 3 K06152 - 1.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000002253 265.0
SRD3_k127_48768_39 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004398 263.0
SRD3_k127_48768_4 Winged helix-turn helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000436 609.0
SRD3_k127_48768_40 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000001297 257.0
SRD3_k127_48768_41 Phosphoglycolate phosphatase K22292 - 3.1.3.105 0.00000000000000000000000000000000000000000000000000000000000000000000008773 259.0
SRD3_k127_48768_42 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000001978 250.0
SRD3_k127_48768_43 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000007614 201.0
SRD3_k127_48768_44 OmpA family K03286 - - 0.00000000000000000000000000000000000000000000000000162 194.0
SRD3_k127_48768_45 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000398 203.0
SRD3_k127_48768_46 - - - - 0.000000000000000000000000000000000000001506 156.0
SRD3_k127_48768_47 Thioredoxin-like domain K03805 - - 0.000000000000000000000000000000008403 143.0
SRD3_k127_48768_48 Adenylate cyclase - - - 0.00000000000000000000001757 115.0
SRD3_k127_48768_5 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 596.0
SRD3_k127_48768_50 Protein of unknown function (DUF3301) - - - 0.0000000000000000002293 91.0
SRD3_k127_48768_51 Protein of unknown function (DUF2630) - - - 0.000000000000000008927 97.0
SRD3_k127_48768_52 Cupin 2, conserved barrel domain protein K16953,K19547 - 4.4.1.3,5.3.3.19 0.00000000000001169 80.0
SRD3_k127_48768_6 MOFRL family K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 575.0
SRD3_k127_48768_7 Extracellular liganD-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 533.0
SRD3_k127_48768_8 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 515.0
SRD3_k127_48768_9 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 507.0
SRD3_k127_4964092_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 9.032e-292 906.0
SRD3_k127_4964092_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.536e-236 739.0
SRD3_k127_4964092_10 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 445.0
SRD3_k127_4964092_11 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 445.0
SRD3_k127_4964092_12 LysM domain K08086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007349 437.0
SRD3_k127_4964092_13 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 359.0
SRD3_k127_4964092_14 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 351.0
SRD3_k127_4964092_15 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 347.0
SRD3_k127_4964092_16 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004903 308.0
SRD3_k127_4964092_17 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 309.0
SRD3_k127_4964092_18 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006338 304.0
SRD3_k127_4964092_19 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 317.0
SRD3_k127_4964092_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0042802,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 5.417e-222 692.0
SRD3_k127_4964092_20 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000002999 276.0
SRD3_k127_4964092_21 Glutamine amidotransferase class-I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003613 261.0
SRD3_k127_4964092_22 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000214 228.0
SRD3_k127_4964092_23 Diguanylate cyclase - - - 0.000000000000000000000000886 115.0
SRD3_k127_4964092_24 Exonuclease VII small subunit - - - 0.0000000000000000005438 91.0
SRD3_k127_4964092_25 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 0.00000000000000002748 88.0
SRD3_k127_4964092_26 Histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000115 79.0
SRD3_k127_4964092_27 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 - - 0.0003898 47.0
SRD3_k127_4964092_3 PFAM Prolyl oligopeptidase family - - - 5.26e-201 646.0
SRD3_k127_4964092_4 Extracellular solute-binding protein, family 5 middle family protein K02035 - - 1.907e-194 627.0
SRD3_k127_4964092_5 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 633.0
SRD3_k127_4964092_6 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009874 552.0
SRD3_k127_4964092_7 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 494.0
SRD3_k127_4964092_8 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008246 508.0
SRD3_k127_4964092_9 Belongs to the ABC transporter superfamily K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 467.0
SRD3_k127_504626_0 MMPL family K07003 - - 0.0 1050.0
SRD3_k127_504626_1 protein synthesis factor, GTP-binding K06207 - - 2.591e-289 902.0
SRD3_k127_504626_10 Methylamine dehydrogenase heavy chain (MADH) K15229 - 1.4.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 415.0
SRD3_k127_504626_11 ABC-type polar amino acid transport system, ATPase component K02028,K09972 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 388.0
SRD3_k127_504626_12 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 361.0
SRD3_k127_504626_13 Bacterial periplasmic substrate-binding proteins K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 337.0
SRD3_k127_504626_14 Protein of unknown function (DUF2891) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000885 341.0
SRD3_k127_504626_15 GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 322.0
SRD3_k127_504626_16 Binding-protein-dependent transport system inner membrane component K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 310.0
SRD3_k127_504626_17 ACT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 321.0
SRD3_k127_504626_18 Binding-protein-dependent transport system inner membrane component K02029 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 307.0
SRD3_k127_504626_19 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 325.0
SRD3_k127_504626_2 Belongs to the ABC transporter superfamily K02031,K02032,K13892,K13896 - - 1.689e-265 833.0
SRD3_k127_504626_20 WD40 repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006793 332.0
SRD3_k127_504626_21 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001358 264.0
SRD3_k127_504626_22 Methylamine dehydrogenase, L chain K15228 - 1.4.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000001797 250.0
SRD3_k127_504626_23 Thioredoxin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005742 258.0
SRD3_k127_504626_24 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001997 251.0
SRD3_k127_504626_25 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000001204 256.0
SRD3_k127_504626_26 DNA recombination protein, rmuC K09760 - - 0.000000000000000000000000000000000000000000000000000000000000003967 222.0
SRD3_k127_504626_27 DNA recombination protein RmuC K09760 - - 0.000000000000000000000000000000000000000000000000000000000003866 223.0
SRD3_k127_504626_28 TIR domain - - - 0.00000000000000000000000000000000000000000000000000008703 195.0
SRD3_k127_504626_29 Cytochrome c - - - 0.00000000000000000000000000000000007932 147.0
SRD3_k127_504626_3 ABC-type dipeptide transport system, periplasmic K02035,K13889 - - 1.247e-245 768.0
SRD3_k127_504626_30 MarR family - - - 0.000000000000000000000000000000003868 133.0
SRD3_k127_504626_31 Methylamine utilisation protein MauE - - - 0.0000000000000000000000000000001647 132.0
SRD3_k127_504626_32 Rhodanese Homology Domain - - - 0.000000000000000000000008367 112.0
SRD3_k127_504626_33 PFAM Cytochrome c, class I - - - 0.000000000000000006173 95.0
SRD3_k127_504626_34 Tellurite resistance protein TerB - - - 0.00000000000000004322 93.0
SRD3_k127_504626_4 Aldehyde dehydrogenase family K00146 - 1.2.1.39 3.07e-224 713.0
SRD3_k127_504626_5 Protein of unknown function (DUF1329) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008833 573.0
SRD3_k127_504626_6 Protein of unknown function (DUF1302) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008539 593.0
SRD3_k127_504626_7 Belongs to the DEAD box helicase family K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000772 520.0
SRD3_k127_504626_8 ABC-type dipeptide oligopeptide nickel transport systems, permease components K13890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 504.0
SRD3_k127_504626_9 PFAM binding-protein-dependent transport systems inner membrane component K13891 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 470.0
SRD3_k127_508828_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1311.0
SRD3_k127_508828_1 2-methylcitrate dehydratase K01720 - 4.2.1.79 5.935e-246 767.0
SRD3_k127_508828_10 Protein of unknown function (DUF3617) - - - 0.000000000000000007426 98.0
SRD3_k127_508828_2 Belongs to the citrate synthase family K01659 - 2.3.3.5 1.442e-195 619.0
SRD3_k127_508828_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 535.0
SRD3_k127_508828_4 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01841,K03417 - 4.1.3.30,5.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 445.0
SRD3_k127_508828_5 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 353.0
SRD3_k127_508828_6 UTRA K03710 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001383 284.0
SRD3_k127_508828_7 EamA-like transporter family K15270 - - 0.00000000000000000000000000000000000000000000000000000000000000008122 233.0
SRD3_k127_508828_8 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.000000000000000000000000000000006887 131.0
SRD3_k127_508828_9 succinate dehydrogenase, cytochrome b subunit K00241 - - 0.00000000000000000000000000002775 123.0
SRD3_k127_5110924_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 2.921e-249 782.0
SRD3_k127_5110924_1 PFAM Glycoside hydrolase 15-related - - - 1.358e-244 770.0
SRD3_k127_5110924_10 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006234 412.0
SRD3_k127_5110924_11 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 405.0
SRD3_k127_5110924_12 PFAM ATP-binding region ATPase domain protein K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 398.0
SRD3_k127_5110924_13 MmgE PrpD family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 387.0
SRD3_k127_5110924_14 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 368.0
SRD3_k127_5110924_15 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002907 366.0
SRD3_k127_5110924_16 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006198 335.0
SRD3_k127_5110924_17 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 314.0
SRD3_k127_5110924_18 PFAM response regulator receiver K02483,K07666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 300.0
SRD3_k127_5110924_19 Histidine kinase K20975 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000542 320.0
SRD3_k127_5110924_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.093e-243 757.0
SRD3_k127_5110924_20 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 287.0
SRD3_k127_5110924_21 Cation efflux family K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003051 282.0
SRD3_k127_5110924_22 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.00000000000000000000000000000000000000000000000000000000000000001677 235.0
SRD3_k127_5110924_23 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000258 221.0
SRD3_k127_5110924_24 Part of a membrane complex involved in electron transport K03616 - - 0.0000000000000000000000000000000000000000000000000000000000004056 216.0
SRD3_k127_5110924_25 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000000000001847 214.0
SRD3_k127_5110924_26 Dehydroquinase class II - - - 0.00000000000000000000000000000000000000000000000000000005092 200.0
SRD3_k127_5110924_27 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.0000000000000000000000000000000000000000000000000000002814 196.0
SRD3_k127_5110924_28 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000000001229 200.0
SRD3_k127_5110924_29 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000008694 203.0
SRD3_k127_5110924_3 FAD dependent oxidoreductase - - - 1.061e-204 651.0
SRD3_k127_5110924_30 Thioredoxin K03671 - - 0.000000000000000000000000000000000000000000000001613 177.0
SRD3_k127_5110924_31 Domain of unknown function (DUF1841) - - - 0.0000000000000000000000000000000000000000000001063 173.0
SRD3_k127_5110924_32 response regulator - - - 0.0000000000000000000000000000000000000000000001815 180.0
SRD3_k127_5110924_33 TRAP-type C4-dicarboxylate transport system small permease component - - - 0.0000000000000000000000000000000000000000000003212 171.0
SRD3_k127_5110924_34 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000003561 157.0
SRD3_k127_5110924_35 Domain of unknown function (DUF1924) - - - 0.00000000000000000000000000000000000000008197 155.0
SRD3_k127_5110924_36 Thioredoxin K03671 - - 0.00000000000000000000000000000000000002129 148.0
SRD3_k127_5110924_37 PFAM Di-haem cytochrome c - - - 0.00000000000000000000000000000000001159 142.0
SRD3_k127_5110924_38 PFAM Cytochrome c, class I - - - 0.0000000000000000000000000000005655 127.0
SRD3_k127_5110924_39 Binds the 23S rRNA K02909 - - 0.000000000000000000000000000001984 121.0
SRD3_k127_5110924_4 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0000183,GO:0001302,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0016874,GO:0016879,GO:0018130,GO:0019219,GO:0019222,GO:0019357,GO:0019358,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032502,GO:0034641,GO:0034654,GO:0040029,GO:0043094,GO:0043173,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046497,GO:0048519,GO:0048523,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051252,GO:0051253,GO:0051276,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008573 567.0
SRD3_k127_5110924_40 YCII-related domain - - - 0.0000000000000000000000000000376 123.0
SRD3_k127_5110924_41 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000004451 120.0
SRD3_k127_5110924_42 Cytochrome c, class I - - - 0.0000000000000000000000001952 117.0
SRD3_k127_5110924_44 YXWGXW repeat (2 copies) - - - 0.00000000000000000001138 97.0
SRD3_k127_5110924_45 Universal stress protein - - - 0.0000000000000000000409 95.0
SRD3_k127_5110924_46 phosphorelay signal transduction system - - - 0.0000000000000003983 85.0
SRD3_k127_5110924_47 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000006115 79.0
SRD3_k127_5110924_48 Cupin superfamily protein - - - 0.00000000004183 74.0
SRD3_k127_5110924_49 Bacterial transcriptional activator domain - - - 0.0000000005748 71.0
SRD3_k127_5110924_5 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 537.0
SRD3_k127_5110924_50 Resolvase, N terminal domain - - - 0.000002468 57.0
SRD3_k127_5110924_51 MAPEG family - - - 0.000003043 49.0
SRD3_k127_5110924_52 GtrA-like protein - - - 0.000005464 55.0
SRD3_k127_5110924_6 TIGRFAM TRAP transporter, DctM subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 546.0
SRD3_k127_5110924_7 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 521.0
SRD3_k127_5110924_8 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 511.0
SRD3_k127_5110924_9 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 477.0
SRD3_k127_5168568_0 4Fe-4S dicluster domain K06911 - - 0.0 1246.0
SRD3_k127_5168568_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.623e-300 972.0
SRD3_k127_5168568_10 fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 511.0
SRD3_k127_5168568_11 Belongs to the ABC transporter superfamily K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 503.0
SRD3_k127_5168568_12 Belongs to the mandelate racemase muconate lactonizing enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 486.0
SRD3_k127_5168568_13 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005915 486.0
SRD3_k127_5168568_14 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 475.0
SRD3_k127_5168568_15 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 473.0
SRD3_k127_5168568_16 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 453.0
SRD3_k127_5168568_17 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004426 452.0
SRD3_k127_5168568_18 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 447.0
SRD3_k127_5168568_19 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 417.0
SRD3_k127_5168568_2 Thiamine pyrophosphate enzyme, N-terminal TPP binding K00156 - 1.2.5.1 1.646e-295 915.0
SRD3_k127_5168568_20 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003617 407.0
SRD3_k127_5168568_21 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-17-dioic acid hydratase (catechol pathway) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 396.0
SRD3_k127_5168568_22 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 379.0
SRD3_k127_5168568_23 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 379.0
SRD3_k127_5168568_24 D-isomer specific 2-hydroxyacid dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 330.0
SRD3_k127_5168568_25 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 332.0
SRD3_k127_5168568_26 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 306.0
SRD3_k127_5168568_27 NAD(P)H-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004321 306.0
SRD3_k127_5168568_28 Enoyl-(Acyl carrier protein) reductase K00019,K18335 - 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 310.0
SRD3_k127_5168568_29 HemX, putative uroporphyrinogen-III C-methyltransferase K02496,K13543 - 2.1.1.107,4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000002295 275.0
SRD3_k127_5168568_3 Belongs to the IlvD Edd family K01690 - 4.2.1.12 4.381e-284 888.0
SRD3_k127_5168568_30 DJ-1/PfpI family K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000000001228 247.0
SRD3_k127_5168568_31 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000645 224.0
SRD3_k127_5168568_32 Prolyl oligopeptidase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000004861 229.0
SRD3_k127_5168568_33 HemY domain protein K02498 - - 0.00000000000000000000000000000000000000000000000000000000000002229 235.0
SRD3_k127_5168568_34 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000611 220.0
SRD3_k127_5168568_35 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000002505 222.0
SRD3_k127_5168568_36 Domain of unknown function (DUF296) K06934 - - 0.000000000000000000000000000000000000000000000000000001103 197.0
SRD3_k127_5168568_37 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000004678 198.0
SRD3_k127_5168568_38 glycosylase K03649 - 3.2.2.28 0.00000000000000000000000000000000000000000000000002654 197.0
SRD3_k127_5168568_39 Histidine kinase - - - 0.0000000000000000000000000000000000000000001534 174.0
SRD3_k127_5168568_4 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 7.853e-261 811.0
SRD3_k127_5168568_40 Protein of unknown function (DUF2975) - - - 0.00000000000000000000000000000000000002247 150.0
SRD3_k127_5168568_41 Binding-protein-dependent transport system inner membrane component K02025 - - 0.000000000000000000000000000000000004357 148.0
SRD3_k127_5168568_42 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000006595 137.0
SRD3_k127_5168568_44 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000006685 119.0
SRD3_k127_5168568_45 Cro/C1-type HTH DNA-binding domain K07727 - - 0.0000000000000000000000000008797 113.0
SRD3_k127_5168568_46 Bacterial protein of unknown function (DUF883) - - - 0.0000000000000000000002454 100.0
SRD3_k127_5168568_47 membrane - - - 0.0000000000000000001099 94.0
SRD3_k127_5168568_49 rRNA binding - - - 0.0000000000001959 82.0
SRD3_k127_5168568_5 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 7.191e-257 812.0
SRD3_k127_5168568_50 SnoaL-like domain - - - 0.0000000000002009 81.0
SRD3_k127_5168568_6 PFAM D-galactarate dehydratase Altronate hydrolase domain protein K01685,K16846 - 4.2.1.7,4.4.1.24 2.704e-241 764.0
SRD3_k127_5168568_7 Bacterial extracellular solute-binding protein K02027 - - 1.581e-230 721.0
SRD3_k127_5168568_8 Periplasmic binding protein domain - - - 2.269e-225 706.0
SRD3_k127_5168568_9 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 557.0
SRD3_k127_5172464_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1267.0
SRD3_k127_5172464_1 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 1.92e-291 906.0
SRD3_k127_5172464_10 Protein of unknown function (DUF2868) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 348.0
SRD3_k127_5172464_11 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 325.0
SRD3_k127_5172464_12 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 305.0
SRD3_k127_5172464_13 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002254 264.0
SRD3_k127_5172464_14 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004749 242.0
SRD3_k127_5172464_15 RNA methyltransferase K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000007228 192.0
SRD3_k127_5172464_16 Universal stress protein family - - - 0.0000000000000000000000000000000000000009615 153.0
SRD3_k127_5172464_17 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.00000000000000000000000001367 115.0
SRD3_k127_5172464_18 Protein of unknown function (DUF1761) - - - 0.000000112 64.0
SRD3_k127_5172464_2 o-acetylhomoserine K01740 - 2.5.1.49 1.417e-212 677.0
SRD3_k127_5172464_3 Mo-co oxidoreductase dimerisation domain K17225 - - 8.361e-201 632.0
SRD3_k127_5172464_4 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 596.0
SRD3_k127_5172464_5 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 472.0
SRD3_k127_5172464_6 Domain of unknown function (DUF3482) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 455.0
SRD3_k127_5172464_7 Disulphide bond corrector protein DsbC K04084,K08344 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007646 450.0
SRD3_k127_5172464_8 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 400.0
SRD3_k127_5172464_9 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005611 378.0
SRD3_k127_5238653_0 PQQ enzyme repeat - - - 0.0 1048.0
SRD3_k127_5238653_1 TIGRFAM Formylmethanofuran dehydrogenase, subunit A K00200 - 1.2.7.12 1.342e-250 807.0
SRD3_k127_5238653_10 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 322.0
SRD3_k127_5238653_11 GHMP kinases C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 317.0
SRD3_k127_5238653_12 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal K10714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008031 311.0
SRD3_k127_5238653_13 Sulphur oxidation protein SoxZ K17226 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 298.0
SRD3_k127_5238653_14 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007436 301.0
SRD3_k127_5238653_15 formaldehyde-activating enzyme K10713 - 4.2.1.147 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006338 280.0
SRD3_k127_5238653_16 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002577 278.0
SRD3_k127_5238653_17 ATP:dephospho-CoA triphosphoribosyl transferase K05966 - 2.4.2.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000002018 273.0
SRD3_k127_5238653_18 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004237 250.0
SRD3_k127_5238653_19 dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000000000000000000000000000000000373 233.0
SRD3_k127_5238653_2 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 617.0
SRD3_k127_5238653_20 PFAM glutamate synthase alpha subunit domain protein K00202 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000005308 209.0
SRD3_k127_5238653_21 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000006113 200.0
SRD3_k127_5238653_22 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000007496 194.0
SRD3_k127_5238653_23 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000005983 178.0
SRD3_k127_5238653_24 Dihydroneopterin aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000000000000000000000000001151 177.0
SRD3_k127_5238653_25 4-HFC-P synthase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000000000000000000002494 176.0
SRD3_k127_5238653_26 - - - - 0.000000000000000000000000000000000000003286 154.0
SRD3_k127_5238653_27 Cytochrome B561 K12262 - - 0.00000000000000000000000000000000001728 157.0
SRD3_k127_5238653_28 - - - - 0.0000000000000000000000551 102.0
SRD3_k127_5238653_3 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 537.0
SRD3_k127_5238653_4 Formylmethanofuran-tetrahydromethanopterin formyltransferase K00672 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009987,GO:0015947,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0030270,GO:0043446,GO:0044237,GO:0071704 2.3.1.101 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 415.0
SRD3_k127_5238653_5 Catalyzes the hydrolysis of methenyl-H(4)MPT( ) to 5- formyl-H(4)MPT K01499 - 3.5.4.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 389.0
SRD3_k127_5238653_6 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003892 383.0
SRD3_k127_5238653_7 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 368.0
SRD3_k127_5238653_8 SMART extracellular solute-binding protein, family 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 350.0
SRD3_k127_5238653_9 TIGRFAM formylmethanofuran dehydrogenase subunit B K00201 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 331.0
SRD3_k127_5254225_0 Belongs to the ABC transporter superfamily K02031,K02032,K10823,K13896,K15583 - - 6.87e-264 825.0
SRD3_k127_5254225_1 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 1.174e-245 788.0
SRD3_k127_5254225_10 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 368.0
SRD3_k127_5254225_11 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004408 312.0
SRD3_k127_5254225_12 endonuclease III K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000002672 265.0
SRD3_k127_5254225_13 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000112 194.0
SRD3_k127_5254225_14 PFAM Acetyltransferase (GNAT) family K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000307 185.0
SRD3_k127_5254225_15 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000003348 189.0
SRD3_k127_5254225_16 Protein conserved in bacteria - - - 0.00000000000000003432 93.0
SRD3_k127_5254225_2 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 3.743e-215 682.0
SRD3_k127_5254225_3 Psort location Cytoplasmic, score 8.96 K07462 - - 1.206e-200 643.0
SRD3_k127_5254225_4 HELICc2 K03722 - 3.6.4.12 6.587e-195 636.0
SRD3_k127_5254225_5 Putative modulator of DNA gyrase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 594.0
SRD3_k127_5254225_6 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 493.0
SRD3_k127_5254225_7 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004343 482.0
SRD3_k127_5254225_8 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 449.0
SRD3_k127_5254225_9 Putative modulator of DNA gyrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007238 451.0
SRD3_k127_5325061_0 amine dehydrogenase activity - - - 1.276e-280 899.0
SRD3_k127_5325061_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 8.141e-236 736.0
SRD3_k127_5325061_2 Protease prsW family - - - 0.0000000000000000000000000000000001691 145.0
SRD3_k127_5325061_3 Response regulator receiver - - - 0.000000000000000002314 90.0
SRD3_k127_5325061_4 heart development - - - 0.0000006117 58.0
SRD3_k127_5329685_0 GcpE protein K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 610.0
SRD3_k127_5329685_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 573.0
SRD3_k127_5329685_2 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 527.0
SRD3_k127_5329685_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005466 437.0
SRD3_k127_5329685_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 332.0
SRD3_k127_5329685_5 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000005941 205.0
SRD3_k127_5329685_6 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000008389 202.0
SRD3_k127_5329685_7 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.000000000000000000000000000000000000000000000119 178.0
SRD3_k127_5329685_8 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000000000000000000003458 141.0
SRD3_k127_5329685_9 Domain of unknown function (DUF4115) K15539 - - 0.0000000000000000000000000000000001122 147.0
SRD3_k127_5384824_0 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 3.177e-299 932.0
SRD3_k127_5384824_1 Bacterial extracellular solute-binding protein K02027 - - 8.905e-236 736.0
SRD3_k127_5384824_10 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 332.0
SRD3_k127_5384824_11 BNR repeat-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 344.0
SRD3_k127_5384824_12 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 313.0
SRD3_k127_5384824_13 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002311 295.0
SRD3_k127_5384824_14 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000001324 269.0
SRD3_k127_5384824_15 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000248 269.0
SRD3_k127_5384824_16 HNH nucleases - - - 0.0000000000000000000000000000000000000000000000000000000000007401 222.0
SRD3_k127_5384824_17 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000001553 207.0
SRD3_k127_5384824_18 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000000000001442 177.0
SRD3_k127_5384824_19 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000001115 184.0
SRD3_k127_5384824_2 GTP cyclohydrolase N terminal - - - 1.111e-206 649.0
SRD3_k127_5384824_20 - - - - 0.0000000000000000000000000000001265 130.0
SRD3_k127_5384824_3 PFAM Alcohol dehydrogenase - - - 1.291e-194 625.0
SRD3_k127_5384824_4 Bacterial regulatory proteins, lacI family K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 457.0
SRD3_k127_5384824_5 TOBE domain K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 456.0
SRD3_k127_5384824_6 PFAM binding-protein-dependent transport systems inner membrane component K02025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 448.0
SRD3_k127_5384824_7 Binding-protein-dependent transport system inner membrane component K02026,K17323 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008909 434.0
SRD3_k127_5384824_8 Protein of unknown function (DUF1688) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 405.0
SRD3_k127_5384824_9 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 337.0
SRD3_k127_5388148_0 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009041 332.0
SRD3_k127_5388148_1 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 302.0
SRD3_k127_5388148_2 Helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 294.0
SRD3_k127_5388148_3 - - - - 0.00000000000000000000003465 111.0
SRD3_k127_5388148_4 Protein of unknown function (DUF2782) - - - 0.0000004459 59.0
SRD3_k127_5409342_0 Glycosyl transferases group 1 - - - 8.181e-260 854.0
SRD3_k127_5409342_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 516.0
SRD3_k127_5409342_2 ABC-type polysaccharide polyol phosphate transport system, ATPase component K09691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 396.0
SRD3_k127_5409342_3 epimerase dehydratase K15856,K22252 - 1.1.1.135,1.1.1.281 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 311.0
SRD3_k127_5409342_4 Methionine biosynthesis protein MetW K18827 - 2.1.1.294,2.7.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001482 291.0
SRD3_k127_5409342_5 Transport permease protein K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008845 274.0
SRD3_k127_5409342_6 glycosyl transferase group 1 K00786,K12994 - 2.4.1.349 0.000000000000000000000000000000000001385 145.0
SRD3_k127_5409342_7 Glycosyltransferase like family 2 - - - 0.00000000000000001795 90.0
SRD3_k127_5456234_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 4.713e-294 921.0
SRD3_k127_5456234_1 Glycosyltransferase like family 2 - - - 1.33e-263 830.0
SRD3_k127_5456234_10 - - - - 0.00000000000000000000000000000000004244 137.0
SRD3_k127_5456234_11 Pkd domain containing protein - - - 0.00000000000000000000000000000004571 136.0
SRD3_k127_5456234_12 - - - - 0.0000000000000000000000000001275 128.0
SRD3_k127_5456234_13 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000003239 118.0
SRD3_k127_5456234_14 - - - - 0.0000000000000000001007 98.0
SRD3_k127_5456234_2 PFAM major facilitator superfamily MFS_1 K08177 - - 1.058e-197 624.0
SRD3_k127_5456234_3 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000565 525.0
SRD3_k127_5456234_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005897 463.0
SRD3_k127_5456234_5 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 405.0
SRD3_k127_5456234_6 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 381.0
SRD3_k127_5456234_7 Protein of unknown function (DUF4254) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851 362.0
SRD3_k127_5456234_8 PFAM glycosyl transferase family 9 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007124 354.0
SRD3_k127_5456234_9 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000001048 246.0
SRD3_k127_5458026_0 4Fe-4S dicluster domain - - - 0.0 1302.0
SRD3_k127_5458026_1 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 - - 7.078e-226 720.0
SRD3_k127_5458026_10 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 394.0
SRD3_k127_5458026_11 enoyl-CoA hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 379.0
SRD3_k127_5458026_12 COG0500 SAM-dependent methyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003492 301.0
SRD3_k127_5458026_13 COG3090 TRAP-type C4-dicarboxylate transport system small permease component - - - 0.000000000000000000000000000000000000000000000000000001936 199.0
SRD3_k127_5458026_14 - - - - 0.00000000000000000000004869 108.0
SRD3_k127_5458026_15 - - - - 0.000000000000000000002864 108.0
SRD3_k127_5458026_16 - - - - 0.00000002724 61.0
SRD3_k127_5458026_2 CoA-transferase family III K07749 - 2.8.3.16 5.629e-214 675.0
SRD3_k127_5458026_3 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 3.111e-210 659.0
SRD3_k127_5458026_4 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 6.664e-195 624.0
SRD3_k127_5458026_5 iron ion homeostasis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 513.0
SRD3_k127_5458026_6 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 471.0
SRD3_k127_5458026_7 TIGRFAM TRAP dicarboxylate transporter, DctP subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000689 495.0
SRD3_k127_5458026_8 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 412.0
SRD3_k127_5458026_9 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 409.0
SRD3_k127_5527903_0 TIGRFAM ATP-dependent helicase HrpA K03578 - 3.6.4.13 0.0 1313.0
SRD3_k127_5527903_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 2.348e-210 664.0
SRD3_k127_5527903_10 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000001278 280.0
SRD3_k127_5527903_11 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000000001951 237.0
SRD3_k127_5527903_12 - K21449 - - 0.00000000000000000000000000000000000000000002886 183.0
SRD3_k127_5527903_13 MaoC like domain - - - 0.000000000000000000000000000000000000000005705 161.0
SRD3_k127_5527903_14 Lytic murein transglycosylase B K08305 - - 0.000000000000000000000000000000000000001142 158.0
SRD3_k127_5527903_15 4TM region of pyridine nucleotide transhydrogenase, mitoch K00322,K00324 - 1.6.1.1,1.6.1.2 0.000000000000000000000000000000000000001462 153.0
SRD3_k127_5527903_16 EVE domain - - - 0.000000000000000000000000000000002757 137.0
SRD3_k127_5527903_17 Etoposide-induced protein 2.4 (EI24) - - - 0.000000000000000000000000000000004605 137.0
SRD3_k127_5527903_2 Tartrate dehydrogenase K07246 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.83,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 549.0
SRD3_k127_5527903_3 CoA-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 543.0
SRD3_k127_5527903_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 502.0
SRD3_k127_5527903_5 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 503.0
SRD3_k127_5527903_6 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007911 528.0
SRD3_k127_5527903_7 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 485.0
SRD3_k127_5527903_8 Dihydroorotate dehydrogenase K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 430.0
SRD3_k127_5527903_9 Protein of unknown function (DUF1631) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 392.0
SRD3_k127_5614014_0 Protein of unknown function - - - 9.17e-230 775.0
SRD3_k127_5614014_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 429.0
SRD3_k127_5614014_2 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 397.0
SRD3_k127_5614014_3 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 351.0
SRD3_k127_5614014_4 Response regulator receiver - - - 0.0000000000000005161 83.0
SRD3_k127_5645436_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 455.0
SRD3_k127_5645436_1 Proline racemase K12658 - 5.1.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007501 424.0
SRD3_k127_5645436_2 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 422.0
SRD3_k127_5645436_3 Belongs to the DapA family K21062 - 3.5.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006302 274.0
SRD3_k127_5645436_4 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000008713 155.0
SRD3_k127_5645436_5 nucleic-acid-binding protein, contains PIN domain - - - 0.0000000000000000000000000000004819 130.0
SRD3_k127_5645436_6 transcriptional regulators K03892 - - 0.000000000000000000000000001963 120.0
SRD3_k127_5645436_7 Transcriptional regulator - - - 0.00000000000000000001098 93.0
SRD3_k127_5678872_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 1.579e-240 752.0
SRD3_k127_5678872_1 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 424.0
SRD3_k127_5678872_2 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006527 322.0
SRD3_k127_5678872_3 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000637 284.0
SRD3_k127_5678872_4 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007989 276.0
SRD3_k127_5678872_5 Phosphoglycerate mutase family K08296 - - 0.00000000000000000000000000000000000000007908 156.0
SRD3_k127_5680215_0 Histidine kinase K07649 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007791 463.0
SRD3_k127_5680215_1 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 392.0
SRD3_k127_5680215_10 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000002448 112.0
SRD3_k127_5680215_11 - - - - 0.0000000000000006955 83.0
SRD3_k127_5680215_12 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K07713 - - 0.000000000000007316 82.0
SRD3_k127_5680215_13 anti-sigma regulatory factor, serine threonine protein kinase K04757 - 2.7.11.1 0.00000000000006707 85.0
SRD3_k127_5680215_14 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000001806 74.0
SRD3_k127_5680215_2 Protein phosphatase 2C domain K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 332.0
SRD3_k127_5680215_3 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 304.0
SRD3_k127_5680215_4 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004722 312.0
SRD3_k127_5680215_5 Integral membrane protein TerC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 297.0
SRD3_k127_5680215_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008958 266.0
SRD3_k127_5680215_7 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000005373 254.0
SRD3_k127_5680215_8 Universal stress protein family - - - 0.0000000000000000000000000001321 120.0
SRD3_k127_5680215_9 - - - - 0.0000000000000000000000003281 123.0
SRD3_k127_575029_0 Predicted membrane protein (DUF2339) - - - 1.329e-195 661.0
SRD3_k127_575029_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 604.0
SRD3_k127_575029_10 Uncharacterized protein conserved in bacteria (DUF2145) - - - 0.000000000000003407 78.0
SRD3_k127_575029_11 - - - - 0.00000000000008833 80.0
SRD3_k127_575029_12 Integrase catalytic - - - 0.00000000000229 68.0
SRD3_k127_575029_13 Transcription elongation factor, GreA/GreB, C-term K06140 - - 0.0000002005 59.0
SRD3_k127_575029_2 Sigma-54 interaction domain K07715 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 567.0
SRD3_k127_575029_3 NnrS protein K07234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 533.0
SRD3_k127_575029_4 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005814 507.0
SRD3_k127_575029_5 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 482.0
SRD3_k127_575029_6 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 362.0
SRD3_k127_575029_7 Protein of unknown function (DUF3999) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008453 284.0
SRD3_k127_575029_8 Domain of unknown function (DUF4337) - - - 0.00000000000000000000000000000000000000000000000000000000000000003488 230.0
SRD3_k127_575029_9 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000124 171.0
SRD3_k127_5786010_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.0 1168.0
SRD3_k127_5786010_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 483.0
SRD3_k127_5786010_2 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 473.0
SRD3_k127_5786010_3 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 291.0
SRD3_k127_5786010_4 protein-glutamate methylesterase activity K00575,K03412,K03413 - 2.1.1.80,3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000002347 271.0
SRD3_k127_5786010_5 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.00000000000000000000000000000000000007865 149.0
SRD3_k127_5786010_6 DNA-binding transcription factor activity - - - 0.0000000000000000000000000002131 121.0
SRD3_k127_5786010_7 - - GO:0008150,GO:0009605,GO:0009607,GO:0043207,GO:0044403,GO:0044419,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0075136 - 0.000000000000000000278 89.0
SRD3_k127_5786010_8 Belongs to the ABC transporter superfamily K10112 - - 0.0000000001269 64.0
SRD3_k127_5792696_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1327.0
SRD3_k127_5792696_1 Aldehyde dehydrogenase family K00128 - 1.2.1.3 1.028e-233 732.0
SRD3_k127_5792696_10 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 323.0
SRD3_k127_5792696_11 FTR1 family K07243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 312.0
SRD3_k127_5792696_12 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 300.0
SRD3_k127_5792696_13 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002687 248.0
SRD3_k127_5792696_14 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000001896 195.0
SRD3_k127_5792696_15 - - - - 0.000000000000000000000000000000000000000001362 179.0
SRD3_k127_5792696_16 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000008288 166.0
SRD3_k127_5792696_17 Cupredoxin-like domain - - - 0.000000000000000000000000002412 116.0
SRD3_k127_5792696_18 - - - - 0.000000000237 66.0
SRD3_k127_5792696_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 499.0
SRD3_k127_5792696_3 ABC transporter, ATP-binding protein K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 482.0
SRD3_k127_5792696_4 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008402 460.0
SRD3_k127_5792696_5 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006447 460.0
SRD3_k127_5792696_6 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006034 384.0
SRD3_k127_5792696_7 Belongs to the binding-protein-dependent transport system permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 375.0
SRD3_k127_5792696_8 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 378.0
SRD3_k127_5792696_9 abc transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 333.0
SRD3_k127_579364_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1515.0
SRD3_k127_579364_1 PFAM glycoside hydrolase 15-related K01178 - 3.2.1.3 0.0 1020.0
SRD3_k127_579364_2 ERAP1-like C-terminal domain K01263 - 3.4.11.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 631.0
SRD3_k127_579364_3 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001365 272.0
SRD3_k127_579364_4 Conserved hypothetical protein 698 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001179 242.0
SRD3_k127_579364_5 Protein of unknown function (DUF3096) - - - 0.00000000001411 69.0
SRD3_k127_579364_6 - - - - 0.0000000008915 68.0
SRD3_k127_5833352_0 argininosuccinate lyase K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 627.0
SRD3_k127_5833352_1 pfkB family carbohydrate kinase K00852,K00856 - 2.7.1.15,2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 404.0
SRD3_k127_5833352_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 395.0
SRD3_k127_5833352_3 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006788 333.0
SRD3_k127_5833352_4 response regulator K08083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000851 305.0
SRD3_k127_5833352_5 Acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000003232 195.0
SRD3_k127_5833352_6 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000000000000428 183.0
SRD3_k127_5833352_7 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000009656 166.0
SRD3_k127_5931167_0 O-methyltransferase activity - - - 1.283e-201 648.0
SRD3_k127_5931167_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01535,K01537 - 3.6.3.6,3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 610.0
SRD3_k127_5931167_10 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 364.0
SRD3_k127_5931167_11 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 359.0
SRD3_k127_5931167_12 Acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 329.0
SRD3_k127_5931167_13 Nodulation protein S (NodS) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 317.0
SRD3_k127_5931167_14 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002786 274.0
SRD3_k127_5931167_15 PFAM class II aldolase adducin family protein K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000005323 257.0
SRD3_k127_5931167_16 (ABC) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001268 264.0
SRD3_k127_5931167_17 cytochrome - - - 0.000000000000000000000000000000000000000000000000001439 188.0
SRD3_k127_5931167_18 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000006023 175.0
SRD3_k127_5931167_19 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000000000247 177.0
SRD3_k127_5931167_2 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 585.0
SRD3_k127_5931167_20 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000004321 144.0
SRD3_k127_5931167_21 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000001862 142.0
SRD3_k127_5931167_22 Universal stress protein - - - 0.0000000000000000000001023 115.0
SRD3_k127_5931167_23 Membrane - - - 0.000000000000000001844 89.0
SRD3_k127_5931167_24 - - - - 0.0000000007522 71.0
SRD3_k127_5931167_26 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0003673 53.0
SRD3_k127_5931167_3 PFAM phosphate acetyl butaryl transferase K00625 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006485 447.0
SRD3_k127_5931167_4 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 443.0
SRD3_k127_5931167_5 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 432.0
SRD3_k127_5931167_6 HAD-superfamily phosphatase subfamily IIIC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000848 409.0
SRD3_k127_5931167_7 PFAM alpha beta hydrolase fold K01561 - 3.8.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000407 390.0
SRD3_k127_5931167_8 Belongs to the DegT DnrJ EryC1 family K02805,K18653 - 2.6.1.104,2.6.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007938 380.0
SRD3_k127_5931167_9 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003612 374.0
SRD3_k127_5970056_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2315.0
SRD3_k127_5970056_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2232.0
SRD3_k127_5970056_2 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001058 246.0
SRD3_k127_5970056_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000003585 75.0
SRD3_k127_5970056_4 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000394 66.0
SRD3_k127_6003992_0 PFAM Glycoside hydrolase 15-related - - - 1.69e-321 1022.0
SRD3_k127_6003992_1 Belongs to the glycosyl hydrolase 1 family K05350 - 3.2.1.21 6.232e-223 719.0
SRD3_k127_6003992_10 ABC-type sugar K02025,K05814,K10118,K17242,K17245 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000664 445.0
SRD3_k127_6003992_11 COG3839 ABC-type sugar transport systems, ATPase components K05816 - 3.6.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007347 441.0
SRD3_k127_6003992_12 Membrane-bound lytic murein transglycosylase K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 441.0
SRD3_k127_6003992_13 ABC-type sugar transport system, permease component K02026,K05815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 427.0
SRD3_k127_6003992_14 ABC-type sugar transport systems, permease components K02025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007851 422.0
SRD3_k127_6003992_15 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255 426.0
SRD3_k127_6003992_16 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008151 398.0
SRD3_k127_6003992_17 ABC-type sugar transport system, permease component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 400.0
SRD3_k127_6003992_18 glycosyl transferase family 2 K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004112 387.0
SRD3_k127_6003992_19 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005998 348.0
SRD3_k127_6003992_2 ABC-type sugar transport system periplasmic component K02027,K05813 - - 7.006e-215 677.0
SRD3_k127_6003992_20 Belongs to the TrpC family K01609 - 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006484 320.0
SRD3_k127_6003992_21 Glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 283.0
SRD3_k127_6003992_22 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001428 282.0
SRD3_k127_6003992_23 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007097 280.0
SRD3_k127_6003992_24 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000001877 267.0
SRD3_k127_6003992_25 endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002251 266.0
SRD3_k127_6003992_26 ApaG domain - - - 0.00000000000000000000000000000000000000000000000005013 184.0
SRD3_k127_6003992_27 Conserved protein of DIM6 NTAB family - - - 0.00000000000000000000000000000000000000000001507 167.0
SRD3_k127_6003992_28 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00824 - 2.6.1.21 0.00000000000000000000000000000000000002702 146.0
SRD3_k127_6003992_29 - - - - 0.000000000000000000000000000000002442 151.0
SRD3_k127_6003992_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 2.531e-199 643.0
SRD3_k127_6003992_30 Belongs to the UPF0250 family K09158 - - 0.000000000000000004077 89.0
SRD3_k127_6003992_31 UPF0391 membrane protein - - - 0.00000000000000138 78.0
SRD3_k127_6003992_32 ThiS family K03154 - - 0.000000000001272 76.0
SRD3_k127_6003992_33 - - - - 0.00000006584 62.0
SRD3_k127_6003992_34 Psort location Cytoplasmic, score 8.96 - - - 0.0004032 51.0
SRD3_k127_6003992_4 glycosyl transferase family 2 K20444 - - 5.094e-199 664.0
SRD3_k127_6003992_5 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 603.0
SRD3_k127_6003992_6 Poly-beta-1,6-N-acetyl-D-glucosamine synthase K11936 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 577.0
SRD3_k127_6003992_7 ABC transporter substrate-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 554.0
SRD3_k127_6003992_8 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 506.0
SRD3_k127_6003992_9 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 511.0
SRD3_k127_6014546_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K15509 - 1.1.1.308 9.355e-218 683.0
SRD3_k127_6014546_1 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006231 556.0
SRD3_k127_6014546_10 - - - - 0.000000000006591 74.0
SRD3_k127_6014546_11 serine-type endopeptidase activity K04771 - 3.4.21.107 0.0001754 45.0
SRD3_k127_6014546_2 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 441.0
SRD3_k127_6014546_3 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 419.0
SRD3_k127_6014546_4 Alcohol dehydrogenase GroES-like domain K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 397.0
SRD3_k127_6014546_5 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 355.0
SRD3_k127_6014546_6 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 338.0
SRD3_k127_6014546_7 KR domain K00046 - 1.1.1.69 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 294.0
SRD3_k127_6014546_8 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000003611 233.0
SRD3_k127_6014546_9 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000002174 190.0
SRD3_k127_6153948_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 409.0
SRD3_k127_6153948_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007791 332.0
SRD3_k127_6153948_2 MraZ protein, putative antitoxin-like K03925 - - 0.0000000000000000000000000000000000000000000000000004641 189.0
SRD3_k127_6153948_3 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.00000000000000000129 94.0
SRD3_k127_6184870_0 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 5.429e-222 718.0
SRD3_k127_6184870_1 Putative modulator of DNA gyrase K03568 - - 3.109e-217 685.0
SRD3_k127_6184870_10 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000000000000000000002361 193.0
SRD3_k127_6184870_11 SnoaL-like domain - - - 0.0000000000000000000000002822 117.0
SRD3_k127_6184870_12 Zinc-finger domain - - - 0.00000000000000000008638 95.0
SRD3_k127_6184870_2 amino acid K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 497.0
SRD3_k127_6184870_3 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006725 479.0
SRD3_k127_6184870_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 459.0
SRD3_k127_6184870_5 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000853 417.0
SRD3_k127_6184870_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 408.0
SRD3_k127_6184870_7 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000358 322.0
SRD3_k127_6184870_8 ATP-binding cassette (ABC) transporters are multidomain membrane proteins, responsible for the controlled efflux and influx of substances (allocrites) across cellular membranes. ATP-binding protein is for coupling the energy of ATP hydrolysis to conformational changes in the transmembrane domains K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 287.0
SRD3_k127_6184870_9 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000000000000000173 201.0
SRD3_k127_618891_0 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 4.518e-235 739.0
SRD3_k127_618891_1 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 475.0
SRD3_k127_618891_10 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 320.0
SRD3_k127_618891_11 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 311.0
SRD3_k127_618891_12 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005476 245.0
SRD3_k127_618891_13 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000008812 69.0
SRD3_k127_618891_14 - - - - 0.000000004361 60.0
SRD3_k127_618891_16 - - - - 0.0001147 45.0
SRD3_k127_618891_2 Iron-containing alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008609 486.0
SRD3_k127_618891_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 415.0
SRD3_k127_618891_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003896 398.0
SRD3_k127_618891_5 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 406.0
SRD3_k127_618891_6 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 407.0
SRD3_k127_618891_7 Binding-protein-dependent transport system inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 382.0
SRD3_k127_618891_8 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 377.0
SRD3_k127_618891_9 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 317.0
SRD3_k127_6234571_0 Tripartite tricarboxylate transporter TctA family K07793 - - 1.885e-205 650.0
SRD3_k127_6234571_1 RimK-like ATPgrasp N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 406.0
SRD3_k127_6234571_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006194 389.0
SRD3_k127_6234571_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000946 335.0
SRD3_k127_6234571_4 Protein of unknown function (DUF3750) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004459 252.0
SRD3_k127_6234571_5 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000001383 116.0
SRD3_k127_6235314_0 Oxidoreductase - - - 5.107e-213 688.0
SRD3_k127_6235314_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 4.092e-203 640.0
SRD3_k127_6235314_10 Tannase and feruloyl esterase - - - 0.000000000000000000000000000000000000000000000000000000000009098 227.0
SRD3_k127_6235314_11 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000008685 193.0
SRD3_k127_6235314_12 Belongs to the anti-sigma-factor antagonist family - - - 0.0000000000000000000000000000000000000000000001745 183.0
SRD3_k127_6235314_13 cheY-homologous receiver domain K07814 - - 0.0000000000000000000000000000000000000000003243 182.0
SRD3_k127_6235314_14 cheY-homologous receiver domain - - - 0.00000000000000000000000000000247 140.0
SRD3_k127_6235314_15 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000036 69.0
SRD3_k127_6235314_16 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.0002404 51.0
SRD3_k127_6235314_2 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 476.0
SRD3_k127_6235314_3 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006028 505.0
SRD3_k127_6235314_4 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 352.0
SRD3_k127_6235314_5 Ubiquinone biosynthesis hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 353.0
SRD3_k127_6235314_6 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 311.0
SRD3_k127_6235314_7 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000843 334.0
SRD3_k127_6235314_8 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005864 300.0
SRD3_k127_6235314_9 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002259 274.0
SRD3_k127_6243996_0 NADPH-dependent glutamate synthase beta - - - 1.505e-314 977.0
SRD3_k127_6243996_1 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 465.0
SRD3_k127_6243996_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 312.0
SRD3_k127_6243996_3 Fe-S oxidoreductase K21834 - - 0.00000000000000000000000000000001549 126.0
SRD3_k127_6243996_4 - - - - 0.000000000000000000000000000002229 125.0
SRD3_k127_6243996_5 AAA domain K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000002074 107.0
SRD3_k127_6245690_0 Aminotransferase K14261 - - 8.381e-212 666.0
SRD3_k127_6245690_1 Homoserine dehydrogenase K00003 - 1.1.1.3 5.39e-200 632.0
SRD3_k127_6245690_10 Protein of unknown function DUF58 - - - 0.00000000001411 77.0
SRD3_k127_6245690_2 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008989 586.0
SRD3_k127_6245690_3 histone deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000716 401.0
SRD3_k127_6245690_4 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 350.0
SRD3_k127_6245690_5 plastoquinol--plastocyanin reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000002286 221.0
SRD3_k127_6245690_6 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000000000000000000000001441 184.0
SRD3_k127_6245690_7 PFAM Peptidase C13 - - - 0.0000000000000000000000000000000000000000005107 175.0
SRD3_k127_6245690_8 - - - - 0.000000000000000000000000000000000000000001483 160.0
SRD3_k127_6245690_9 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000000000000203 108.0
SRD3_k127_6249616_0 CoA binding domain - - - 0.0 1152.0
SRD3_k127_6249616_1 Belongs to the IlvD Edd family - - - 2.561e-275 868.0
SRD3_k127_6249616_10 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 422.0
SRD3_k127_6249616_11 Belongs to the SUA5 family K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 323.0
SRD3_k127_6249616_12 Transcriptional regulator, LysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001276 281.0
SRD3_k127_6249616_13 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001688 283.0
SRD3_k127_6249616_14 Belongs to the TPP enzyme family K01577 - 4.1.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000007913 256.0
SRD3_k127_6249616_15 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000000000000000000000000004583 176.0
SRD3_k127_6249616_16 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000002024 174.0
SRD3_k127_6249616_17 PFAM membrane protein of K08972 - - 0.0000000000000000000000000000000001022 140.0
SRD3_k127_6249616_18 Carboxyl transferase domain K13932 - 4.1.1.87 0.0000000000000000000000000000008513 138.0
SRD3_k127_6249616_19 - - - - 0.00000000000141 68.0
SRD3_k127_6249616_2 Tripartite tricarboxylate transporter TctA family K07793 - - 4.348e-260 809.0
SRD3_k127_6249616_20 PFAM FxsA cytoplasmic membrane protein K07113 - - 0.0001409 46.0
SRD3_k127_6249616_21 TonB-dependent receptor - - - 0.000293 51.0
SRD3_k127_6249616_3 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 1.283e-250 779.0
SRD3_k127_6249616_4 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate K07749 - 2.8.3.16 2.338e-246 763.0
SRD3_k127_6249616_5 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 2.176e-195 634.0
SRD3_k127_6249616_6 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K18661 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 578.0
SRD3_k127_6249616_7 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007428 485.0
SRD3_k127_6249616_8 NADH:flavin oxidoreductase / NADH oxidase family K00354 - 1.6.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 484.0
SRD3_k127_6249616_9 Methylenetetrahydrofolate reductase K00297 GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 410.0
SRD3_k127_6357675_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 3.853e-306 949.0
SRD3_k127_6357675_1 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848,K20906 - 5.4.99.2,5.4.99.64 6.463e-296 914.0
SRD3_k127_6357675_10 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 501.0
SRD3_k127_6357675_11 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 410.0
SRD3_k127_6357675_12 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 347.0
SRD3_k127_6357675_13 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 339.0
SRD3_k127_6357675_14 ArgK protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009181 342.0
SRD3_k127_6357675_15 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 304.0
SRD3_k127_6357675_16 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 292.0
SRD3_k127_6357675_17 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 289.0
SRD3_k127_6357675_18 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000097 286.0
SRD3_k127_6357675_19 class I DNA-(apurinic or apyrimidinic site) endonuclease activity K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000278 265.0
SRD3_k127_6357675_2 TIGRFAM malate synthase A K01638 - 2.3.3.9 8.509e-252 786.0
SRD3_k127_6357675_20 ACT domain K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000001079 273.0
SRD3_k127_6357675_21 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002113 255.0
SRD3_k127_6357675_22 PFAM 20S proteasome, A and B subunits K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000004098 256.0
SRD3_k127_6357675_23 Protein of unknown function (DUF3501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001047 252.0
SRD3_k127_6357675_24 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000000000000005412 237.0
SRD3_k127_6357675_25 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005111 248.0
SRD3_k127_6357675_26 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000001738 250.0
SRD3_k127_6357675_27 PFAM Lytic transglycosylase catalytic - - - 0.000000000000000000000000000000000000000000000000000000000000002107 225.0
SRD3_k127_6357675_28 COG2185 Methylmalonyl-CoA mutase, C-terminal domain subunit (cobalamin-binding) K01849,K20907 - 5.4.99.2,5.4.99.64 0.0000000000000000000000000000000000000000000000000000000000007723 212.0
SRD3_k127_6357675_29 FCD - - - 0.0000000000000000000000000000000000000000000000000000002829 204.0
SRD3_k127_6357675_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.34e-238 761.0
SRD3_k127_6357675_30 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000005625 198.0
SRD3_k127_6357675_31 transcriptional regulator K07734 - - 0.00000000000000000000000000000000000000000000001799 181.0
SRD3_k127_6357675_32 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000002795 183.0
SRD3_k127_6357675_33 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000314 164.0
SRD3_k127_6357675_34 atpase or kinase K06925 - - 0.000000000000000000000000000000000000000000248 166.0
SRD3_k127_6357675_35 PFAM regulatory protein, MerR K22491 - - 0.0000000000000000000000000000000000000000005111 171.0
SRD3_k127_6357675_36 - - - - 0.00000000000000000000000000000000000001081 166.0
SRD3_k127_6357675_37 COG0526 Thiol-disulfide isomerase and thioredoxins K00384 - 1.8.1.9 0.0000000000000000000000000008627 117.0
SRD3_k127_6357675_38 Protein of unknown function (DUF3106) - - - 0.000000000000000000000000004458 125.0
SRD3_k127_6357675_39 S4 RNA-binding domain K04762 GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009987,GO:0016070,GO:0033554,GO:0034605,GO:0034641,GO:0043021,GO:0043023,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.0000000000000000000000000179 117.0
SRD3_k127_6357675_4 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 6.238e-235 741.0
SRD3_k127_6357675_40 Permeases of the drug metabolite transporter (DMT) superfamily K12962 - - 0.00000000000000000000006801 105.0
SRD3_k127_6357675_41 PFAM RDD domain containing protein - - - 0.00000000000000000000397 104.0
SRD3_k127_6357675_43 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000005825 83.0
SRD3_k127_6357675_44 - - - - 0.0000000000003452 81.0
SRD3_k127_6357675_45 Protein of unknown function (DUF3619) - - - 0.000000002808 69.0
SRD3_k127_6357675_5 AMP-binding enzyme C-terminal domain K01912 - 6.2.1.30 1.858e-234 741.0
SRD3_k127_6357675_6 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 1.134e-224 736.0
SRD3_k127_6357675_7 Cysteine-rich domain - - - 8.254e-202 643.0
SRD3_k127_6357675_8 COG COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase pyruvate dehydrogenase (cytochrome) glyoxylate carboligase phosphonopyruvate decarboxylase Amino acid transport and metabolism Coenzyme metabolism K01652 - 2.2.1.6 6.366e-201 666.0
SRD3_k127_6357675_9 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009609 555.0
SRD3_k127_6361400_0 Dehydratase family K01687,K22186 - 4.2.1.82,4.2.1.9 2.944e-312 964.0
SRD3_k127_6361400_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.451e-302 943.0
SRD3_k127_6361400_10 Co Zn Cd cation transporters - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 431.0
SRD3_k127_6361400_11 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007295 400.0
SRD3_k127_6361400_12 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 396.0
SRD3_k127_6361400_13 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 387.0
SRD3_k127_6361400_14 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K00446 - 1.13.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 379.0
SRD3_k127_6361400_15 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005929 351.0
SRD3_k127_6361400_16 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 344.0
SRD3_k127_6361400_17 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 350.0
SRD3_k127_6361400_18 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 332.0
SRD3_k127_6361400_19 FCD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004175 296.0
SRD3_k127_6361400_2 Phospholipase D Active site motif K01115 - 3.1.4.4 1.159e-235 752.0
SRD3_k127_6361400_20 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007863 292.0
SRD3_k127_6361400_21 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003079 283.0
SRD3_k127_6361400_22 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005055 283.0
SRD3_k127_6361400_23 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002955 266.0
SRD3_k127_6361400_24 Belongs to the Dps family K04047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002279 256.0
SRD3_k127_6361400_25 cytochrome c-type protein K02569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007663 256.0
SRD3_k127_6361400_26 cytochrome c-type protein K02569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007419 247.0
SRD3_k127_6361400_27 NADPH-dependent FMN reductase K19784 - - 0.0000000000000000000000000000000000000000000000000000000000000001425 226.0
SRD3_k127_6361400_28 Endonuclease Exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000006722 246.0
SRD3_k127_6361400_29 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000002358 192.0
SRD3_k127_6361400_3 Belongs to the aldehyde dehydrogenase family K00140,K22187 - 1.2.1.18,1.2.1.27 9.482e-233 741.0
SRD3_k127_6361400_30 PFAM DoxX family protein K15977 - - 0.000000000000000000000000000000000000000000000004156 176.0
SRD3_k127_6361400_31 PFAM response regulator receiver K15012 - - 0.0000000000000000000000000000000000008383 156.0
SRD3_k127_6361400_32 PFAM cytochrome c class I K08738 - - 0.0000000000000000000000000000001809 128.0
SRD3_k127_6361400_33 PFAM cytochrome c class I K08738 - - 0.00000000000000000000000009258 117.0
SRD3_k127_6361400_34 RND efflux system, outer membrane lipoprotein K18139 - - 0.00000000000000000000001214 106.0
SRD3_k127_6361400_35 - - - - 0.0000000000000000006305 95.0
SRD3_k127_6361400_36 Belongs to the universal stress protein A family - - - 0.000001211 56.0
SRD3_k127_6361400_4 (ABC) transporter K01995 - - 1.023e-198 648.0
SRD3_k127_6361400_5 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 617.0
SRD3_k127_6361400_6 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007461 543.0
SRD3_k127_6361400_7 COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006712 519.0
SRD3_k127_6361400_8 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 473.0
SRD3_k127_6361400_9 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 464.0
SRD3_k127_6409814_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1289.0
SRD3_k127_6409814_1 Transglutaminase-like superfamily - - - 0.0 1275.0
SRD3_k127_6409814_10 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 454.0
SRD3_k127_6409814_11 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 425.0
SRD3_k127_6409814_12 GIY-YIG type nucleases (URI domain) K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 413.0
SRD3_k127_6409814_13 Phosphoglycerate mutase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007497 383.0
SRD3_k127_6409814_14 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 359.0
SRD3_k127_6409814_15 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 330.0
SRD3_k127_6409814_16 PFAM 20S proteasome, A and B subunits K07395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 325.0
SRD3_k127_6409814_17 DNA polymerase alpha chain like domain K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004976 321.0
SRD3_k127_6409814_18 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006051 318.0
SRD3_k127_6409814_19 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005035 295.0
SRD3_k127_6409814_2 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008986,GO:0009058,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019318,GO:0019319,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0071704,GO:1901576 2.7.9.2 0.0 1073.0
SRD3_k127_6409814_20 Belongs to the peptidase S24 family K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000004856 263.0
SRD3_k127_6409814_21 Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000003467 231.0
SRD3_k127_6409814_22 transporter component K07112 - - 0.000000000000000000000000000000000000000000000000000001619 196.0
SRD3_k127_6409814_23 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.000000000000000000000000000000000000000000000000000003228 197.0
SRD3_k127_6409814_24 SpoU rRNA Methylase family K03437 - - 0.000000000000000000000000000000000000000000000000002074 192.0
SRD3_k127_6409814_25 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000002265 186.0
SRD3_k127_6409814_26 transporter component K07112 - - 0.00000000000000000000000000000000000000000000000004651 189.0
SRD3_k127_6409814_27 Hep Hag repeat protein - - - 0.00000000000000000000000000000000000000000000000103 197.0
SRD3_k127_6409814_28 transcriptional regulator, XRE family - - - 0.00000000000000000000000000000000000000001516 156.0
SRD3_k127_6409814_29 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000006427 133.0
SRD3_k127_6409814_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 2.276e-308 958.0
SRD3_k127_6409814_30 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.0000000000000000000000000000005242 126.0
SRD3_k127_6409814_31 Parallel beta-helix repeats - - - 0.00000000000000006143 93.0
SRD3_k127_6409814_32 - - - - 0.0000000007993 60.0
SRD3_k127_6409814_33 - - - - 0.0000001626 53.0
SRD3_k127_6409814_34 DnaJ-class molecular chaperone with C-terminal Zn finger domain - - - 0.0000007958 57.0
SRD3_k127_6409814_35 Belongs to the peptidase S1B family - - - 0.000005335 59.0
SRD3_k127_6409814_36 - - - - 0.00001457 51.0
SRD3_k127_6409814_37 - K19168 - - 0.00004021 52.0
SRD3_k127_6409814_4 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 1.112e-271 846.0
SRD3_k127_6409814_5 DNA ligase K01971 - 6.5.1.1 3.065e-265 848.0
SRD3_k127_6409814_6 Circularly permuted ATP-grasp type 2 - - - 4.974e-218 687.0
SRD3_k127_6409814_7 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 1.555e-213 670.0
SRD3_k127_6409814_8 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 598.0
SRD3_k127_6409814_9 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006627 591.0
SRD3_k127_6478526_0 COG0643 Chemotaxis protein histidine kinase and related kinases K02487,K06596 - - 0.0 1107.0
SRD3_k127_6478526_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 4.494e-301 937.0
SRD3_k127_6478526_2 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 518.0
SRD3_k127_6478526_3 Virulence factor BrkB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 343.0
SRD3_k127_6478526_4 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008372 266.0
SRD3_k127_6478526_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009062 256.0
SRD3_k127_6478526_6 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000002311 184.0
SRD3_k127_6478526_7 Cupredoxin-like domain - - - 0.00000000000000000000000000000000002814 137.0
SRD3_k127_6478526_8 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000000001879 113.0
SRD3_k127_6478526_9 COG0044 Dihydroorotase and related cyclic amidohydrolases K01465 - 3.5.2.3 0.0000000008437 69.0
SRD3_k127_6495160_0 AMP-binding enzyme C-terminal domain K00666 - - 2.115e-204 649.0
SRD3_k127_6495160_1 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 618.0
SRD3_k127_6495160_2 Branched-chain amino acid transport system / permease component K01997,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 425.0
SRD3_k127_6495160_3 branched-chain amino acid K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000003871 247.0
SRD3_k127_6589811_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 425.0
SRD3_k127_6589811_1 2Fe-2S iron-sulfur cluster binding domain K00523 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 376.0
SRD3_k127_6589811_2 sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 301.0
SRD3_k127_6589811_3 Sulfurtransferase TusA - - - 0.000000000000000000000000000000000000000000000000000000000002524 213.0
SRD3_k127_6589811_4 Cas6 Crispr - - - 0.000000000000000000000000000000000000002538 156.0
SRD3_k127_6589811_5 sulfite reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 0.00000000000000000000000000002262 120.0
SRD3_k127_6589811_6 Belongs to the sulfur carrier protein TusA family K04085 - - 0.00000000000000000000000000005823 118.0
SRD3_k127_6589811_7 - - - - 0.000000000000000000000000002239 120.0
SRD3_k127_6589811_8 - - - - 0.000002811 59.0
SRD3_k127_6589811_9 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00003355 56.0
SRD3_k127_6627058_0 Transcriptional regulator K03603,K05799 - - 1.032e-249 809.0
SRD3_k127_6627058_1 Uncharacterized protein family UPF0004 K06168 - 2.8.4.3 1.1e-210 662.0
SRD3_k127_6627058_2 Phosphate starvation-inducible protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 447.0
SRD3_k127_6627058_3 PFAM CBS domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007207 370.0
SRD3_k127_6627058_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000000000000000000000001512 176.0
SRD3_k127_6627058_5 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0009133 46.0
SRD3_k127_6645704_0 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 2.032e-290 910.0
SRD3_k127_6645704_1 Phosphoglucomutase K15778 - 5.4.2.2,5.4.2.8 6.426e-208 662.0
SRD3_k127_6645704_10 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000005863 270.0
SRD3_k127_6645704_11 Low affinity iron permease - - - 0.00000000000000000000000000000001158 132.0
SRD3_k127_6645704_12 Domain of unknown function (DUF1850) - - - 0.00000000000000000000000000002271 123.0
SRD3_k127_6645704_13 PFAM PsiF repeat protein - - - 0.0003135 50.0
SRD3_k127_6645704_2 DAHP synthetase I family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 572.0
SRD3_k127_6645704_3 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 472.0
SRD3_k127_6645704_4 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 472.0
SRD3_k127_6645704_5 TRAP transporter solute receptor, TAXI family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 466.0
SRD3_k127_6645704_6 PFAM peptidase M48 Ste24p K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 476.0
SRD3_k127_6645704_7 alpha/beta hydrolase fold K07019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 374.0
SRD3_k127_6645704_8 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009207 320.0
SRD3_k127_6645704_9 Nudix N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001437 255.0
SRD3_k127_6663937_0 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 6.095e-195 617.0
SRD3_k127_6663937_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 562.0
SRD3_k127_6663937_10 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009281 247.0
SRD3_k127_6663937_11 Uncharacterised protein family (UPF0227) K07000 - - 0.0000000000000000000000000000000000000000000005568 188.0
SRD3_k127_6663937_12 - - - - 0.000000000000000000000000000000201 139.0
SRD3_k127_6663937_13 RNB K01147 - 3.1.13.1 0.000000000000000000000002824 117.0
SRD3_k127_6663937_14 Enoyl-(Acyl carrier protein) reductase K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.0000000000000000000000561 104.0
SRD3_k127_6663937_15 Belongs to the skp family K06142 - - 0.0000000000000000000002948 111.0
SRD3_k127_6663937_16 aminotransferase class I and II - - - 0.0000000000000007663 79.0
SRD3_k127_6663937_17 Phospholipid methyltransferase - - - 0.000000000000001004 86.0
SRD3_k127_6663937_2 PFAM Aminotransferase class-III K00819 - 2.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 531.0
SRD3_k127_6663937_3 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 451.0
SRD3_k127_6663937_4 aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007578 430.0
SRD3_k127_6663937_5 Aldo/keto reductase family K05882 - 1.1.1.91 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 424.0
SRD3_k127_6663937_6 PFAM 5'-nucleotidase K01081 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 404.0
SRD3_k127_6663937_7 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 378.0
SRD3_k127_6663937_8 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 353.0
SRD3_k127_6663937_9 KR domain K10780 - 1.3.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000129 296.0
SRD3_k127_6694081_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 408.0
SRD3_k127_6694081_1 Cytochrome C and Quinol oxidase polypeptide I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005942 307.0
SRD3_k127_6694081_2 RES - - - 0.0000000000000000000000000000000000000000000000002049 184.0
SRD3_k127_6694081_3 Protein of unknown function (DUF2384) - - - 0.000000000000000000000000000000001324 134.0
SRD3_k127_6694081_4 cytochrome oxidase assembly K02259 - - 0.00000000000000000000000007617 123.0
SRD3_k127_6694081_5 Rubrerythrin - - - 0.000000000000000000000002783 117.0
SRD3_k127_6710471_0 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 1.302e-242 763.0
SRD3_k127_6710471_1 COG1960 Acyl-CoA dehydrogenases K20035 - - 9.686e-238 750.0
SRD3_k127_6710471_10 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006182 349.0
SRD3_k127_6710471_11 ATPase histidine kinase DNA gyrase B HSP90 domain protein K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 366.0
SRD3_k127_6710471_12 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 341.0
SRD3_k127_6710471_13 Beta/Gamma crystallin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009972 295.0
SRD3_k127_6710471_14 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002708 281.0
SRD3_k127_6710471_15 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000007231 276.0
SRD3_k127_6710471_16 Pfam Enoyl-CoA hydratase isomerase K13816 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001707 256.0
SRD3_k127_6710471_17 inositol mono-phosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000004077 219.0
SRD3_k127_6710471_18 membrane K15977 - - 0.00000000000000000000000000000000000000000000001633 175.0
SRD3_k127_6710471_19 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000004625 187.0
SRD3_k127_6710471_2 M61 glycyl aminopeptidase - - - 1.52e-211 672.0
SRD3_k127_6710471_20 Ion transport protein K10716 - - 0.0000000000000000000000000000000000008292 141.0
SRD3_k127_6710471_21 - - - - 0.00000000000000000000000000005939 135.0
SRD3_k127_6710471_22 - - - - 0.0000000000003546 75.0
SRD3_k127_6710471_23 - - - - 0.000000009629 63.0
SRD3_k127_6710471_24 - K06950 - - 0.00000008257 58.0
SRD3_k127_6710471_25 Transcriptional regulatory protein, C terminal K07671 - - 0.000212 51.0
SRD3_k127_6710471_3 Sigma-54 interaction domain protein K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 551.0
SRD3_k127_6710471_4 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007761 503.0
SRD3_k127_6710471_5 Histidine Phosphotransfer domain K10715 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009354 467.0
SRD3_k127_6710471_6 protein involved in outer membrane biogenesis K07290 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0032386,GO:0032879,GO:0032880,GO:0033157,GO:0044464,GO:0050789,GO:0051049,GO:0051223,GO:0060341,GO:0065007,GO:0070201,GO:0071944,GO:0090087,GO:0090313,GO:1903533,GO:1903827,GO:1905475 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 421.0
SRD3_k127_6710471_7 Electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 386.0
SRD3_k127_6710471_8 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 380.0
SRD3_k127_6710471_9 ROK family K00845,K00847,K00884 - 2.7.1.2,2.7.1.4,2.7.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 374.0
SRD3_k127_6711676_0 TIGRFAM glutamine synthetase, type I K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 5.948e-260 806.0
SRD3_k127_6711676_1 PFAM Carbamoyl-phosphate synthase L chain, ATP binding domain, Biotin carboxylase C-terminal domain, Carbamoyl-phosphate synthase L chain, N-terminal domain K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 7.574e-238 741.0
SRD3_k127_6711676_10 FxsA cytoplasmic membrane protein K07113 - - 0.000000001178 65.0
SRD3_k127_6711676_2 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001351 280.0
SRD3_k127_6711676_3 PFAM ATP-binding region ATPase domain protein K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000003291 229.0
SRD3_k127_6711676_4 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000005972 182.0
SRD3_k127_6711676_5 Thioredoxin-like - - - 0.00000000000000000000000000000000000000006116 164.0
SRD3_k127_6711676_6 TIGRFAM MJ0042 family finger-like protein - - - 0.0000000000000000000000000000001149 141.0
SRD3_k127_6711676_7 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.000000000000000000000000000007521 128.0
SRD3_k127_6711676_8 tolerance protein K03926 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914 - 0.0000000000000000000000000005841 121.0
SRD3_k127_6711676_9 Domain of unknown function (DUF4124) - - - 0.00000000000005618 78.0
SRD3_k127_6715914_0 Required for chromosome condensation and partitioning K03529 - - 3.045e-285 915.0
SRD3_k127_6715914_1 breast cancer carboxy-terminal domain K01972 - 6.5.1.2 1.071e-274 875.0
SRD3_k127_6715914_10 Belongs to the ABC transporter superfamily K12372 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009615 353.0
SRD3_k127_6715914_11 Belongs to the ABC transporter superfamily K12371,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 356.0
SRD3_k127_6715914_12 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 288.0
SRD3_k127_6715914_13 haloacid dehalogenase K01560 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000003213 199.0
SRD3_k127_6715914_14 PFAM Multiple antibiotic resistance (MarC)-related K05595 - - 0.0000000000000000000000000000000000000000000000000009099 192.0
SRD3_k127_6715914_15 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.0000000000000000000000000000000000000003758 165.0
SRD3_k127_6715914_16 - - - - 0.000000004317 61.0
SRD3_k127_6715914_17 - - - - 0.00000001005 66.0
SRD3_k127_6715914_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K12368 - - 1.173e-246 784.0
SRD3_k127_6715914_3 Conserved hypothetical protein 698 - - - 1.856e-197 628.0
SRD3_k127_6715914_4 peptidase dimerisation domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 528.0
SRD3_k127_6715914_5 Binding-protein-dependent transport system inner membrane component K12369 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003962 491.0
SRD3_k127_6715914_6 N-terminal TM domain of oligopeptide transport permease C K02034,K12370 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 414.0
SRD3_k127_6715914_7 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 393.0
SRD3_k127_6715914_8 Transcriptional regulator, LysR family K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 362.0
SRD3_k127_6715914_9 Protein of unknown function (DUF2817) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004316 365.0
SRD3_k127_67183_0 Belongs to the mandelate racemase muconate lactonizing enzyme family K08323 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0008150,GO:0008152,GO:0008927,GO:0009056,GO:0016052,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0044238,GO:0046872,GO:0071704,GO:1901575 4.2.1.8 8.593e-228 710.0
SRD3_k127_67183_1 Bacterial extracellular solute-binding protein K02055 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 562.0
SRD3_k127_67183_10 inner membrane component K02054 - - 0.0000000111 69.0
SRD3_k127_67183_2 abc transporter K02052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005006 461.0
SRD3_k127_67183_3 peptidase m48, ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 435.0
SRD3_k127_67183_4 Histidine kinase K20975 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006808 361.0
SRD3_k127_67183_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003209 248.0
SRD3_k127_67183_6 FCD - - - 0.0000000000000000000000000000000000000000000000000006626 197.0
SRD3_k127_67183_7 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000001108 186.0
SRD3_k127_67183_8 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000001874 188.0
SRD3_k127_67183_9 Heavy-metal resistance - - - 0.000000000007014 74.0
SRD3_k127_6747101_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 9.994e-306 977.0
SRD3_k127_6747101_1 OHCU decarboxylase K02083,K06016 - 3.5.1.6,3.5.1.87,3.5.3.9 7.103e-262 818.0
SRD3_k127_6747101_10 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 402.0
SRD3_k127_6747101_11 Bacterial extracellular solute-binding protein K02055 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 389.0
SRD3_k127_6747101_12 PFAM ABC transporter K02052,K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007224 382.0
SRD3_k127_6747101_13 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 375.0
SRD3_k127_6747101_14 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 364.0
SRD3_k127_6747101_15 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 359.0
SRD3_k127_6747101_16 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 369.0
SRD3_k127_6747101_17 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000969 353.0
SRD3_k127_6747101_18 Uncharacterized protein conserved in bacteria (DUF2331) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 334.0
SRD3_k127_6747101_19 Binding-protein-dependent transport system inner membrane component K02054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 325.0
SRD3_k127_6747101_2 PFAM fumarate reductase succinate dehydrogenase flavoprotein K00239,K00244 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 620.0
SRD3_k127_6747101_20 ABC-type nitrate sulfonate bicarbonate transport system, periplasmic component K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 321.0
SRD3_k127_6747101_21 PFAM ABC transporter related K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005867 312.0
SRD3_k127_6747101_22 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 319.0
SRD3_k127_6747101_23 Binding-protein-dependent transport system inner membrane component K02053 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004538 299.0
SRD3_k127_6747101_24 Binding-protein-dependent transport systems inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 308.0
SRD3_k127_6747101_25 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 293.0
SRD3_k127_6747101_26 COG2818 3-methyladenine DNA glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009315 292.0
SRD3_k127_6747101_27 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008348 274.0
SRD3_k127_6747101_28 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007255 260.0
SRD3_k127_6747101_29 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007293 257.0
SRD3_k127_6747101_3 ABC transporter K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005299 601.0
SRD3_k127_6747101_30 dithiol-disulfide isomerase involved in polyketide biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000001819 216.0
SRD3_k127_6747101_31 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000003038 205.0
SRD3_k127_6747101_32 transglycosylase - - - 0.00000000000000000000000000000000000000000000000001369 204.0
SRD3_k127_6747101_33 Prokaryotic cytochrome b561 K12262 - - 0.000000000000000000000000000000000000000000000004915 187.0
SRD3_k127_6747101_34 Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily K07127 - 3.5.2.17 0.00000000000000000000000000000000000000307 150.0
SRD3_k127_6747101_35 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000003278 147.0
SRD3_k127_6747101_36 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000002671 142.0
SRD3_k127_6747101_37 HIUase/Transthyretin family - - - 0.0000000000000000000000000000000003709 134.0
SRD3_k127_6747101_38 Mammalian cell entry related domain protein K02067,K06192 - - 0.0000000000000000000000000000000502 130.0
SRD3_k127_6747101_39 methyltransferase activity - - - 0.000000000000000000000000000008087 123.0
SRD3_k127_6747101_4 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830,K00839 - 2.6.1.112,2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 520.0
SRD3_k127_6747101_40 SPW repeat - - - 0.000000000000000000002784 100.0
SRD3_k127_6747101_41 - - - - 0.000000000000000003803 90.0
SRD3_k127_6747101_42 PFAM Protein phosphatase 2C K01090 - 3.1.3.16 0.0001721 53.0
SRD3_k127_6747101_5 ABC transporter substrate-binding protein PnrA-like K02058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 503.0
SRD3_k127_6747101_6 Xanthine dehydrogenase small subunit K13481 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 506.0
SRD3_k127_6747101_7 protein involved in propionate catabolism - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 459.0
SRD3_k127_6747101_8 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 439.0
SRD3_k127_6747101_9 PFAM sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 409.0
SRD3_k127_6773390_0 Serves to protect cells from the toxic effects of hydrogen peroxide K03781 - 1.11.1.6 6.062e-297 914.0
SRD3_k127_6773390_1 translation release factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 383.0
SRD3_k127_6773390_2 Encapsulating protein for peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006934 341.0
SRD3_k127_6773390_3 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 329.0
SRD3_k127_6773390_4 Evidence 4 Homologs of previously reported genes of K09700 - - 0.000000000000000000000000000000000000000002495 158.0
SRD3_k127_6773390_5 - - - - 0.00000000000001547 81.0
SRD3_k127_6773390_6 KR domain K03366 - 1.1.1.304,1.1.1.76 0.0000000001344 63.0
SRD3_k127_6773390_7 PFAM NnrS family protein - - - 0.00002073 48.0
SRD3_k127_6782490_0 nadph quinone oxidoreductase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008194 407.0
SRD3_k127_6782490_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 367.0
SRD3_k127_6782490_2 PFAM NAD-dependent epimerase dehydratase K21883 - 1.1.1.401 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008324 338.0
SRD3_k127_6782490_3 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 306.0
SRD3_k127_6782490_4 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000008066 222.0
SRD3_k127_6810845_0 Hydantoinase/oxoprolinase N-terminal region K01469 - 3.5.2.9 1.043e-272 848.0
SRD3_k127_6810845_1 PFAM permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 3.101e-262 818.0
SRD3_k127_6810845_10 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 GO:0000049,GO:0002161,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0097159,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000003225 256.0
SRD3_k127_6810845_11 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000000000000000001103 241.0
SRD3_k127_6810845_12 Tripartite ATP-independent periplasmic transporter DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000009344 217.0
SRD3_k127_6810845_13 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000003513 188.0
SRD3_k127_6810845_14 Belongs to the ABC transporter superfamily K10112 - - 0.000000000000009679 89.0
SRD3_k127_6810845_15 MerR HTH family regulatory protein K18997 - - 0.0000000001142 66.0
SRD3_k127_6810845_2 5-oxoprolinase K01469,K01473 - 3.5.2.14,3.5.2.9 2.823e-259 847.0
SRD3_k127_6810845_3 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 8.282e-209 655.0
SRD3_k127_6810845_4 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 521.0
SRD3_k127_6810845_5 PFAM TRAP dicarboxylate transporter- DctP subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 462.0
SRD3_k127_6810845_6 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 480.0
SRD3_k127_6810845_7 recombinase XerD K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003852 360.0
SRD3_k127_6810845_8 COG1177 ABC-type spermidine putrescine transport system, permease component II K02053 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 300.0
SRD3_k127_6810845_9 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 308.0
SRD3_k127_6909374_0 PFAM binding-protein-dependent transport systems inner membrane component K02011 - - 4.645e-260 820.0
SRD3_k127_6909374_1 Extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 582.0
SRD3_k127_6909374_2 Part of the ABC transporter complex FbpABC involved in Fe(3 ) ions import. Responsible for energy coupling to the transport system K02010,K02052 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 488.0
SRD3_k127_6909374_3 Glutamate-cysteine ligase family 2(GCS2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 497.0
SRD3_k127_6909374_4 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 422.0
SRD3_k127_6909374_5 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009597 408.0
SRD3_k127_6909374_6 N-formylglutamate amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001085 254.0
SRD3_k127_6909374_7 RimK-like ATPgrasp N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000022 211.0
SRD3_k127_6909374_8 Hep Hag repeat protein - - - 0.00000000000000000000000000000000005257 154.0
SRD3_k127_6919843_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1054.0
SRD3_k127_6919843_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 477.0
SRD3_k127_6919843_2 Phospholipase D. Active site motifs. K06132 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 482.0
SRD3_k127_6919843_3 4Fe-4S ferredoxin, iron-sulfur binding K00124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 390.0
SRD3_k127_6919843_4 formate dehydrogenase K00127 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009238 346.0
SRD3_k127_6919843_5 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 331.0
SRD3_k127_6919843_6 - - - - 0.0000000007859 70.0
SRD3_k127_6919843_7 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00007865 48.0
SRD3_k127_6937457_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0 1221.0
SRD3_k127_6937457_1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1170.0
SRD3_k127_6937457_10 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 - 1.13.11.5 2.635e-196 637.0
SRD3_k127_6937457_11 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 621.0
SRD3_k127_6937457_12 cation transport ATPase K01533 - 3.6.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 638.0
SRD3_k127_6937457_13 cytochrome d1 heme K19345 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005072 559.0
SRD3_k127_6937457_14 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 586.0
SRD3_k127_6937457_15 Fumarylacetoacetase N-terminal K01555 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 565.0
SRD3_k127_6937457_16 HemN C-terminal domain - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 562.0
SRD3_k127_6937457_17 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 537.0
SRD3_k127_6937457_18 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 526.0
SRD3_k127_6937457_19 XdhC and CoxI family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 502.0
SRD3_k127_6937457_2 Cytochrome d1, heme K15864 - 1.7.2.1,1.7.99.1 1.136e-296 921.0
SRD3_k127_6937457_20 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008688 494.0
SRD3_k127_6937457_21 ATPase associated with various cellular activities, AAA_5 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 437.0
SRD3_k127_6937457_22 glutamate decarboxylase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004083 439.0
SRD3_k127_6937457_23 PFAM VWA containing CoxE family protein K07161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006367 427.0
SRD3_k127_6937457_24 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007307 419.0
SRD3_k127_6937457_25 Nitronate monooxygenase K00459,K02371 - 1.13.12.16,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 392.0
SRD3_k127_6937457_26 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 384.0
SRD3_k127_6937457_27 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 407.0
SRD3_k127_6937457_28 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 371.0
SRD3_k127_6937457_29 translation release factor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003102 362.0
SRD3_k127_6937457_3 PQQ enzyme repeat - - - 1.242e-289 898.0
SRD3_k127_6937457_30 Hydantoinase/oxoprolinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009618 357.0
SRD3_k127_6937457_31 cytochrome - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 352.0
SRD3_k127_6937457_32 Oxidoreductase molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000328 347.0
SRD3_k127_6937457_33 transcriptional regulator AsnC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 346.0
SRD3_k127_6937457_34 subunit II K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 331.0
SRD3_k127_6937457_35 Dehydrogenase K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005318 318.0
SRD3_k127_6937457_36 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 305.0
SRD3_k127_6937457_37 Pterin binding enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 298.0
SRD3_k127_6937457_38 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006869 302.0
SRD3_k127_6937457_39 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001182 291.0
SRD3_k127_6937457_4 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 1.03e-261 815.0
SRD3_k127_6937457_40 Glutathione S-transferase, N-terminal domain K11208 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001495 278.0
SRD3_k127_6937457_41 Nitrile hydratase, alpha chain K01721,K20807 - 4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003592 276.0
SRD3_k127_6937457_42 Bacterial regulatory proteins, luxR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004164 271.0
SRD3_k127_6937457_43 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000137 265.0
SRD3_k127_6937457_44 COG1522 Transcriptional regulators - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002125 267.0
SRD3_k127_6937457_45 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006282,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000006311 257.0
SRD3_k127_6937457_46 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002452 258.0
SRD3_k127_6937457_47 Protein of unknown function (DUF447) K09154 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005067 249.0
SRD3_k127_6937457_48 Transcriptional regulator crp fnr family K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001624 247.0
SRD3_k127_6937457_49 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000004964 242.0
SRD3_k127_6937457_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 2.797e-246 772.0
SRD3_k127_6937457_50 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001881 251.0
SRD3_k127_6937457_51 Flavoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001099 261.0
SRD3_k127_6937457_52 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000199 227.0
SRD3_k127_6937457_53 aspartate glutamate uridylate kinase - - - 0.00000000000000000000000000000000000000000000000000000005377 205.0
SRD3_k127_6937457_54 Glyoxalase-like domain K04750 - - 0.0000000000000000000000000000000000000000000000000000003877 197.0
SRD3_k127_6937457_55 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.000000000000000000000000000000000000000000000000000001796 199.0
SRD3_k127_6937457_56 carbon monoxide dehydrogenase subunit g K09386 - - 0.000000000000000000000000000000000000000000000004433 181.0
SRD3_k127_6937457_57 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000008498 172.0
SRD3_k127_6937457_58 Ankyrin repeats (3 copies) K06867,K21440 - - 0.000000000000000000000000000000000000000000001211 178.0
SRD3_k127_6937457_59 Hemerythrin HHE cation binding - - - 0.00000000000000000000000000000000000000000007658 172.0
SRD3_k127_6937457_6 Cytochrome D1 heme domain - - - 7.302e-229 736.0
SRD3_k127_6937457_60 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.0000000000000000000000000000000000000004264 151.0
SRD3_k127_6937457_61 Cytochrome C oxidase, cbb3-type, subunit III K19344 - - 0.00000000000000000000000000007103 121.0
SRD3_k127_6937457_62 PFAM CHRD domain containing protein - - - 0.0000000000000000000000000001154 124.0
SRD3_k127_6937457_63 Protein of unknown function (DUF3761) - - - 0.0000000000000000000000000003132 126.0
SRD3_k127_6937457_64 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000000000000000835 119.0
SRD3_k127_6937457_65 Universal stress protein - - - 0.0000000000000000000000006241 109.0
SRD3_k127_6937457_66 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.000000000000000000000002697 109.0
SRD3_k127_6937457_67 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000000000000000000000003611 119.0
SRD3_k127_6937457_68 Pfam Response regulator receiver - - - 0.0000000000000000000000432 104.0
SRD3_k127_6937457_69 NmrA-like family - - - 0.00000000000000000009354 94.0
SRD3_k127_6937457_7 Phosphoesterase family - - - 2.794e-217 689.0
SRD3_k127_6937457_71 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.0000000000000000004052 102.0
SRD3_k127_6937457_72 ATP-grasp domain - - - 0.00000000000000001839 83.0
SRD3_k127_6937457_73 - - - - 0.0000000000000004438 86.0
SRD3_k127_6937457_74 cytochrome oxidase maturation protein cbb3-type - - - 0.000000000000003443 79.0
SRD3_k127_6937457_75 - - - - 0.00000000009468 68.0
SRD3_k127_6937457_76 Putative peptidoglycan binding domain - - - 0.00000009396 63.0
SRD3_k127_6937457_77 cytochrome oxidase K00407 - - 0.000002515 51.0
SRD3_k127_6937457_78 FixH family K09926 - - 0.000006697 56.0
SRD3_k127_6937457_79 Glucose / Sorbosone dehydrogenase K08738 - - 0.00002513 56.0
SRD3_k127_6937457_8 COG0294 Dihydropteroate synthase and related enzymes - - - 8.044e-209 670.0
SRD3_k127_6937457_80 Bacterial protein of unknown function (DUF883) - - - 0.00007547 49.0
SRD3_k127_6937457_81 ribosome binding - - - 0.0009868 47.0
SRD3_k127_6937457_9 iron-sulfur 4fe-4s ferredoxin transmembrane protein - - - 2.232e-199 632.0
SRD3_k127_6981678_0 ABC transporter transmembrane region K02021 - - 6.063e-205 674.0
SRD3_k127_6981678_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 488.0
SRD3_k127_6981678_2 Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 464.0
SRD3_k127_6981678_3 glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008965 320.0
SRD3_k127_6981678_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002181 307.0
SRD3_k127_6981678_5 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000001796 221.0
SRD3_k127_6981678_6 - - - - 0.000000000000000000000000000000000000000000000000506 183.0
SRD3_k127_6981678_7 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000005361 117.0
SRD3_k127_6981678_9 Methyltransferase K18897 - 2.1.1.157 0.000595 50.0
SRD3_k127_7008069_0 alpha-L-arabinofuranosidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 373.0
SRD3_k127_7008069_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 365.0
SRD3_k127_7008069_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 333.0
SRD3_k127_7008069_3 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 293.0
SRD3_k127_7008069_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001469 264.0
SRD3_k127_7008069_5 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950,K13940 - 2.7.6.3,4.1.2.25 0.00000000000000000000000000000000000001542 152.0
SRD3_k127_7008069_6 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.000000000000000000000000000000002157 132.0
SRD3_k127_7028403_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1243.0
SRD3_k127_7028403_1 ABC-2 family transporter protein - - - 0.0 1241.0
SRD3_k127_7028403_2 ABC-type multidrug transport system ATPase component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 402.0
SRD3_k127_7028403_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001793 267.0
SRD3_k127_7028403_4 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000008522 225.0
SRD3_k127_7028403_5 Short repeat of unknown function (DUF308) - - - 0.00000000000000000000000000000000000000000000000000000000004896 211.0
SRD3_k127_7028403_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000004662 70.0
SRD3_k127_7031068_0 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004887 437.0
SRD3_k127_7031068_1 TIGRFAM hydrolase, TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 368.0
SRD3_k127_7031068_10 PFAM Type IV pilus assembly PilZ K02676 - - 0.000000000000000000000000000000000000001137 164.0
SRD3_k127_7031068_11 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000045 105.0
SRD3_k127_7031068_12 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000002345 70.0
SRD3_k127_7031068_2 Squalene synthase HpnD K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 368.0
SRD3_k127_7031068_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 336.0
SRD3_k127_7031068_4 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 317.0
SRD3_k127_7031068_5 Flavin containing amine oxidoreductase K21677 - 1.17.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000002849 256.0
SRD3_k127_7031068_6 SmpB protein K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004753 240.0
SRD3_k127_7031068_7 dna polymerase iii K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000001356 228.0
SRD3_k127_7031068_8 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000001547 185.0
SRD3_k127_7031068_9 Pfam Ankyrin K06867 - - 0.00000000000000000000000000000000000000007446 161.0
SRD3_k127_7043056_0 Fumarate reductase flavoprotein C-term K00239,K00244 - 1.3.5.1,1.3.5.4 3.844e-273 850.0
SRD3_k127_7043056_1 Belongs to the TPP enzyme family K03852 - 2.3.3.15 4.276e-271 867.0
SRD3_k127_7043056_10 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 456.0
SRD3_k127_7043056_11 binding-protein-dependent transport systems inner membrane component K02050,K15552 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 428.0
SRD3_k127_7043056_12 taurine ABC transporter, periplasmic binding protein K15551 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007132 414.0
SRD3_k127_7043056_13 Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system K10831 - 3.6.3.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 369.0
SRD3_k127_7043056_14 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00245 - 1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 358.0
SRD3_k127_7043056_15 Fumarase C-terminus K01678,K03780 - 4.2.1.2,4.2.1.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 304.0
SRD3_k127_7043056_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001371 244.0
SRD3_k127_7043056_17 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000001089 234.0
SRD3_k127_7043056_18 Succinate dehydrogenase/Fumarate reductase transmembrane subunit - - - 0.0000000000000000000000000008812 119.0
SRD3_k127_7043056_19 Succinate dehydrogenase/Fumarate reductase transmembrane subunit - - - 0.000000000000000003975 97.0
SRD3_k127_7043056_2 orn lys arg decarboxylase K01584 - 4.1.1.19 2.77e-242 752.0
SRD3_k127_7043056_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 599.0
SRD3_k127_7043056_4 STAS domain K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009864 561.0
SRD3_k127_7043056_5 Dehydrogenase K15515 - 1.2.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 579.0
SRD3_k127_7043056_6 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006481 541.0
SRD3_k127_7043056_7 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 531.0
SRD3_k127_7043056_8 Long-chain fatty acid--CoA ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 531.0
SRD3_k127_7043056_9 Fumarate hydratase (Fumerase) K01677,K03779 - 4.2.1.2,4.2.1.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 458.0
SRD3_k127_7085083_0 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03669 GO:0005575,GO:0016020 - 3.852e-200 634.0
SRD3_k127_7085083_1 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 617.0
SRD3_k127_7085083_10 Nuclear protein SET K07117 - - 0.00000000000000000000000000000000000000000000001167 179.0
SRD3_k127_7085083_11 Chromate transporter K07240 - - 0.000000000000000000000000000000000000000000393 164.0
SRD3_k127_7085083_12 Chromate transporter K07240 - - 0.00000000000000000000000000000000000000888 153.0
SRD3_k127_7085083_13 Transcription factor zinc-finger - - - 0.00000000000000000000000000000000000003545 153.0
SRD3_k127_7085083_14 - - - - 0.000000000000000000000000005427 118.0
SRD3_k127_7085083_15 aldo keto reductase K19265 - - 0.0000000000000002177 80.0
SRD3_k127_7085083_16 KTSC domain - - - 0.000000000000000448 84.0
SRD3_k127_7085083_17 DNA-binding transcription factor activity K06075 - - 0.000000000000001029 86.0
SRD3_k127_7085083_18 Membrane-bound lysozyme-inhibitor of c-type lysozyme - - - 0.0002104 48.0
SRD3_k127_7085083_19 - - - - 0.0003146 50.0
SRD3_k127_7085083_2 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 614.0
SRD3_k127_7085083_3 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 583.0
SRD3_k127_7085083_4 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007348 548.0
SRD3_k127_7085083_5 major facilitator superfamily K03446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007147 549.0
SRD3_k127_7085083_6 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 328.0
SRD3_k127_7085083_7 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006985 330.0
SRD3_k127_7085083_8 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 351.0
SRD3_k127_7085083_9 PFAM secretion protein HlyD family protein K03543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001131 281.0
SRD3_k127_7120726_0 Putative diguanylate phosphodiesterase - - - 1.413e-258 827.0
SRD3_k127_7120726_1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032 - - 2.894e-238 753.0
SRD3_k127_7120726_10 Glutaredoxin-family domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 387.0
SRD3_k127_7120726_11 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003777 335.0
SRD3_k127_7120726_12 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 305.0
SRD3_k127_7120726_13 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000002138 230.0
SRD3_k127_7120726_14 PFAM Endonuclease exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000237 205.0
SRD3_k127_7120726_15 SMART Prolyl 4-hydroxylase, alpha subunit - - - 0.000000000000000000000000000000000000000002894 163.0
SRD3_k127_7120726_16 membrane protein of uknown function UCP014873 - - - 0.00000000000000000000000000000002215 139.0
SRD3_k127_7120726_17 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000002338 130.0
SRD3_k127_7120726_18 DNA ligase N terminus K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000003048 129.0
SRD3_k127_7120726_19 Dodecin K09165 - - 0.0000000000000000000000000009943 113.0
SRD3_k127_7120726_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 2.51e-227 749.0
SRD3_k127_7120726_3 ABC transporter transmembrane region K02021 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 625.0
SRD3_k127_7120726_4 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 593.0
SRD3_k127_7120726_5 Catalyzes the oxidation of dihydrolipoamide to lipoamide K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 583.0
SRD3_k127_7120726_6 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009655 494.0
SRD3_k127_7120726_7 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 502.0
SRD3_k127_7120726_8 Zinc metalloprotease (Elastase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 457.0
SRD3_k127_7120726_9 Exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 450.0
SRD3_k127_7123266_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1227.0
SRD3_k127_7123266_1 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 6.988e-249 796.0
SRD3_k127_7123266_10 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 572.0
SRD3_k127_7123266_11 Putative modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 557.0
SRD3_k127_7123266_12 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 522.0
SRD3_k127_7123266_13 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 511.0
SRD3_k127_7123266_14 sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 506.0
SRD3_k127_7123266_15 Trap dicarboxylate transporter, dctm subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 488.0
SRD3_k127_7123266_16 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008281 476.0
SRD3_k127_7123266_17 TIGRFAM TRAP dicarboxylate transporter, DctP subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 471.0
SRD3_k127_7123266_18 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008153 466.0
SRD3_k127_7123266_19 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004582 456.0
SRD3_k127_7123266_2 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 8.338e-236 747.0
SRD3_k127_7123266_20 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 413.0
SRD3_k127_7123266_21 Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008944 429.0
SRD3_k127_7123266_22 FAD-NAD(P)-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 400.0
SRD3_k127_7123266_23 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 398.0
SRD3_k127_7123266_24 PFAM Short-chain dehydrogenase reductase SDR K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 377.0
SRD3_k127_7123266_25 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004157 333.0
SRD3_k127_7123266_26 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000673 321.0
SRD3_k127_7123266_27 Probable molybdopterin binding domain K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 289.0
SRD3_k127_7123266_28 Maleylacetoacetate isomerase K01801 - 5.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 285.0
SRD3_k127_7123266_29 Fumarylacetoacetate (FAA) hydrolase family K16165 - 3.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006304 270.0
SRD3_k127_7123266_3 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 1.044e-218 690.0
SRD3_k127_7123266_30 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008419 273.0
SRD3_k127_7123266_31 Sugar (and other) transporter K07552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003993 278.0
SRD3_k127_7123266_32 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001417 249.0
SRD3_k127_7123266_33 Periplasmic domain of Sensor histidine kinase RisS K07638 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000006274 258.0
SRD3_k127_7123266_34 alpha/beta hydrolase fold K01432 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000001308 241.0
SRD3_k127_7123266_35 Lumazine binding domain K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000001231 224.0
SRD3_k127_7123266_36 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000000006981 239.0
SRD3_k127_7123266_37 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000003454 222.0
SRD3_k127_7123266_38 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000001364 212.0
SRD3_k127_7123266_39 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000000001702 202.0
SRD3_k127_7123266_4 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 5.162e-214 675.0
SRD3_k127_7123266_40 PFAM thioesterase superfamily protein K07107 - - 0.00000000000000000000000000000000000000000000000000004004 199.0
SRD3_k127_7123266_41 Thioesterase superfamily protein - - - 0.0000000000000000000000000000000000000000000000003554 186.0
SRD3_k127_7123266_42 Formyl transferase - - - 0.000000000000000000000000000000000000000000000002101 179.0
SRD3_k127_7123266_43 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000001948 187.0
SRD3_k127_7123266_44 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000001471 167.0
SRD3_k127_7123266_45 FR47-like protein - - - 0.00000000000000000000000000000000000000000003197 177.0
SRD3_k127_7123266_46 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000003293 164.0
SRD3_k127_7123266_47 acetyltransferase - - - 0.0000000000000000000000000000000000002076 154.0
SRD3_k127_7123266_48 Tripartite ATP-independent periplasmic transporter, DctQ - - - 0.00000000000000000000000000000000001103 148.0
SRD3_k127_7123266_49 Belongs to the UPF0307 family K09889 - - 0.000000000000000000000000000001979 131.0
SRD3_k127_7123266_5 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 6.872e-213 671.0
SRD3_k127_7123266_50 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000146 136.0
SRD3_k127_7123266_51 Type II transport protein GspH K08084 - - 0.00000000000000000000000001206 115.0
SRD3_k127_7123266_52 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000004375 103.0
SRD3_k127_7123266_53 Transcriptional regulatory protein, C terminal K02483,K07659 - - 0.000000000000000000006638 92.0
SRD3_k127_7123266_54 - - - - 0.0000000000000000003207 102.0
SRD3_k127_7123266_55 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.0000000000000000008504 98.0
SRD3_k127_7123266_56 RecX family - - - 0.000000000000000003616 95.0
SRD3_k127_7123266_57 Type IV Pilus-assembly protein W K02672 - - 0.00000000000005475 85.0
SRD3_k127_7123266_58 Pilus assembly protein PilX - - - 0.00000000001502 76.0
SRD3_k127_7123266_59 - - - - 0.000002119 53.0
SRD3_k127_7123266_6 DNA internalization-related competence protein ComEC Rec2 K02238 - - 1.027e-205 668.0
SRD3_k127_7123266_7 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 1.252e-204 642.0
SRD3_k127_7123266_8 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 5.382e-202 636.0
SRD3_k127_7123266_9 PFAM FAD linked oxidase domain protein K00102,K03777 - 1.1.2.4,1.1.5.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 616.0
SRD3_k127_7134716_0 Glycosyl transferases group 1 - - - 0.0 1110.0
SRD3_k127_7134716_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 2.374e-278 875.0
SRD3_k127_7134716_10 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 409.0
SRD3_k127_7134716_11 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 389.0
SRD3_k127_7134716_12 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 371.0
SRD3_k127_7134716_13 amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 364.0
SRD3_k127_7134716_14 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 359.0
SRD3_k127_7134716_15 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006592 383.0
SRD3_k127_7134716_16 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 359.0
SRD3_k127_7134716_17 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 349.0
SRD3_k127_7134716_18 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003473 351.0
SRD3_k127_7134716_19 serine acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 329.0
SRD3_k127_7134716_2 Carbamoyltransferase K00612 - - 1.567e-236 746.0
SRD3_k127_7134716_20 PFAM glycosyl transferase family 9 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003304 338.0
SRD3_k127_7134716_21 Pfam Glycosyl transferase family 2 K00786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 332.0
SRD3_k127_7134716_22 glycosyl transferase group 1 K14335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005465 302.0
SRD3_k127_7134716_23 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 322.0
SRD3_k127_7134716_24 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007337 290.0
SRD3_k127_7134716_25 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001925 289.0
SRD3_k127_7134716_26 COG0438 Glycosyltransferase K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003174 273.0
SRD3_k127_7134716_27 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001178 265.0
SRD3_k127_7134716_28 phosphoserine phosphatase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000006655 259.0
SRD3_k127_7134716_29 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000000000000000000000000000000004871 212.0
SRD3_k127_7134716_3 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006509 593.0
SRD3_k127_7134716_30 Transcriptional regulator K13643 - - 0.000000000000000000000000000000000000000000000000000000699 196.0
SRD3_k127_7134716_31 D,D-heptose 1,7-bisphosphate phosphatase - - - 0.00000000000000000000000000000000000000000000000000000164 202.0
SRD3_k127_7134716_32 Phosphoribosyl transferase domain K07101 - - 0.0000000000000000000000000000000000000000000000000002561 206.0
SRD3_k127_7134716_33 isochorismatase hydrolase - - - 0.0000000000000000000000000000000000000000000000000002675 194.0
SRD3_k127_7134716_34 PFAM PRC-barrel domain protein - - - 0.000000000000000000000000000000000000000000000000007049 188.0
SRD3_k127_7134716_35 deacetylase K06986 - - 0.00000000000000000000000000000000000000000000000003377 192.0
SRD3_k127_7134716_36 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000008659 171.0
SRD3_k127_7134716_37 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000005992 165.0
SRD3_k127_7134716_38 cheY-homologous receiver domain - - - 0.00000000000000000000000000005028 126.0
SRD3_k127_7134716_39 - - - - 0.000000000000000000000006674 119.0
SRD3_k127_7134716_4 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005844 581.0
SRD3_k127_7134716_40 - - - - 0.000000000000000000004231 106.0
SRD3_k127_7134716_41 Carbamoyltransferase N-terminus K00612 - - 0.00000000000000000004191 96.0
SRD3_k127_7134716_42 Domain of unknown function (DUF305) K08995 - - 0.000000000000000006597 91.0
SRD3_k127_7134716_43 protein conserved in bacteria K09937 - - 0.00000000000001334 76.0
SRD3_k127_7134716_45 signal transduction histidine kinase K07642 - 2.7.13.3 0.000001725 60.0
SRD3_k127_7134716_5 ABC transporter transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 565.0
SRD3_k127_7134716_6 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 524.0
SRD3_k127_7134716_7 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 491.0
SRD3_k127_7134716_8 RmlD substrate binding domain K01710,K01784 - 4.2.1.46,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 488.0
SRD3_k127_7134716_9 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 472.0
SRD3_k127_7138756_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 1.406e-297 935.0
SRD3_k127_7138756_1 PFAM binding-protein-dependent transport systems inner membrane component K02011 - - 1.108e-246 793.0
SRD3_k127_7138756_10 ABC-type Fe3 transport system, periplasmic K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007291 471.0
SRD3_k127_7138756_11 Involved in arsenical resistance. Thought to form the channel of an arsenite pump K03893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004969 429.0
SRD3_k127_7138756_12 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007884 407.0
SRD3_k127_7138756_13 N-terminal half of MaoC dehydratase K09709,K18291 - 4.2.1.153,4.2.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 378.0
SRD3_k127_7138756_14 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02052 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 361.0
SRD3_k127_7138756_15 Protein of unknown function (DUF3182) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005657 344.0
SRD3_k127_7138756_16 Uncharacterised protein family (UPF0227) K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 303.0
SRD3_k127_7138756_17 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 312.0
SRD3_k127_7138756_18 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001775 301.0
SRD3_k127_7138756_19 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000000000000000000007116 240.0
SRD3_k127_7138756_2 Group II intron, maturase-specific domain - - - 5.438e-212 664.0
SRD3_k127_7138756_20 Psort location Cytoplasmic, score K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000007973 193.0
SRD3_k127_7138756_21 Domain of unknown function (DUF4154) - - - 0.000000000000000000000000000000000000005886 156.0
SRD3_k127_7138756_22 UTRA K03710 - - 0.00000000000000000000000000002452 130.0
SRD3_k127_7138756_3 COG1960 Acyl-CoA dehydrogenases K18244 - - 2.646e-200 634.0
SRD3_k127_7138756_4 Aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 8.511e-194 620.0
SRD3_k127_7138756_5 ABC-type Fe3 transport system permease component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 594.0
SRD3_k127_7138756_6 Sulfatase K01133 - 3.1.6.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 582.0
SRD3_k127_7138756_7 TonB-dependent Receptor Plug Domain K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 557.0
SRD3_k127_7138756_8 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02017,K02052 - 3.6.3.29,3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009666 516.0
SRD3_k127_7138756_9 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 499.0
SRD3_k127_7178188_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1046.0
SRD3_k127_7178188_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1035.0
SRD3_k127_7178188_10 oxidase, subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 434.0
SRD3_k127_7178188_11 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 352.0
SRD3_k127_7178188_12 protocatechuate 3,4-dioxygenase, beta subunit' K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 353.0
SRD3_k127_7178188_13 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 302.0
SRD3_k127_7178188_14 Ndr family K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 298.0
SRD3_k127_7178188_15 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008104 291.0
SRD3_k127_7178188_16 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001268 269.0
SRD3_k127_7178188_17 Tryptophan halogenase K21401 - 1.3.99.38 0.000000000000000000000000000000000000000000000000000000000000000000000000005163 267.0
SRD3_k127_7178188_18 protocatechuate 3,4-dioxygenase, alpha K00448 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000000002916 244.0
SRD3_k127_7178188_19 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000000000000000004231 201.0
SRD3_k127_7178188_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.658e-272 851.0
SRD3_k127_7178188_20 NUDIX domain K08310 - 3.6.1.67 0.0000000000000000000000000000000000000000000000000000117 194.0
SRD3_k127_7178188_21 IPT/TIG domain - - - 0.000000000000000000000000000000000000000000000000001431 210.0
SRD3_k127_7178188_22 PFAM Peptidase M11 gametolysin - - - 0.00000000000000000000000000000000000000000000004283 196.0
SRD3_k127_7178188_23 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000007535 164.0
SRD3_k127_7178188_24 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000000000009529 141.0
SRD3_k127_7178188_25 Ribonuclease K01167 - 3.1.27.3 0.000000000000000000000000000001617 140.0
SRD3_k127_7178188_26 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000002262 132.0
SRD3_k127_7178188_27 Regulatory protein, FmdB family - - - 0.00000000000000000000000001583 116.0
SRD3_k127_7178188_28 Membrane protein implicated in regulation of membrane protease activity - - - 0.0000000000000000000000007215 110.0
SRD3_k127_7178188_29 Protein of unknown function (DUF541) - - - 0.00000000000000000000007657 111.0
SRD3_k127_7178188_3 Participates in both transcription termination and antitermination K02600 - - 2.213e-221 703.0
SRD3_k127_7178188_30 Barstar (barnase inhibitor) - - - 0.0000000000000116 85.0
SRD3_k127_7178188_4 Bacterial protein of unknown function (DUF853) K06915 - - 5.493e-214 676.0
SRD3_k127_7178188_5 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009286 586.0
SRD3_k127_7178188_6 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 587.0
SRD3_k127_7178188_7 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 473.0
SRD3_k127_7178188_8 3-carboxy-cis,cis-muconate cycloisomerase K01857 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 465.0
SRD3_k127_7178188_9 C-terminal region of band_7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 434.0
SRD3_k127_7296916_0 RNB K01147 - 3.1.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 511.0
SRD3_k127_7296916_1 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006454 277.0
SRD3_k127_7296916_2 TIGRFAM TonB family protein K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000003142 247.0
SRD3_k127_737314_0 Sulfite reductase K00381 - 1.8.1.2 7.863e-252 788.0
SRD3_k127_737314_1 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004349 331.0
SRD3_k127_737314_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000002411 263.0
SRD3_k127_737314_3 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000001684 218.0
SRD3_k127_737314_4 Tetrapyrrole (Corrin/Porphyrin) Methylases K02303 - 2.1.1.107 0.0000000000000000000000000000000000000000000000000000000001218 218.0
SRD3_k127_737314_5 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.0000000000000000000000000000000000000000000000000008071 190.0
SRD3_k127_737314_6 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000005642 164.0
SRD3_k127_737314_7 - - - - 0.00000000000000000000000000000000000000005921 172.0
SRD3_k127_737314_8 PFAM cobalamin (vitamin B12) biosynthesis CbiX protein K03795 - 4.99.1.3 0.00000000000000000000000000005385 120.0
SRD3_k127_737314_9 Predicted membrane protein (DUF2069) - - - 0.00000000006077 68.0
SRD3_k127_7495641_0 UvrD REP K03657 - 3.6.4.12 3.12e-208 658.0
SRD3_k127_7495641_1 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 526.0
SRD3_k127_7495641_2 Dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 512.0
SRD3_k127_7495641_3 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 382.0
SRD3_k127_7495641_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 306.0
SRD3_k127_7495641_5 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000000004142 162.0
SRD3_k127_7504895_0 TIGRFAM phenylacetate-CoA oxygenase, PaaG subunit K02609 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 560.0
SRD3_k127_7504895_1 TRANSFER OF ELECTRONS FROM NADH TO THE RESPIRATORY CHAIN. THE IMMEDIATE ELECTRON ACCEPTOR FOR THE ENZYME IS BELIEVED TO BE UBIQUINONE. DOES NOT COUPLE THE REDOX REACTION TO PROTON TRANSLOCATION. Interpro FAD-dependent pyridine K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 557.0
SRD3_k127_7504895_10 Phenylacetic acid degradation B K02610 - - 0.000000000000000000000000000000000000000000003776 179.0
SRD3_k127_7504895_11 phenylacetate-CoA oxygenase, PaaJ subunit K02612 GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000000000000000005921 173.0
SRD3_k127_7504895_2 Bacterial extracellular solute-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 529.0
SRD3_k127_7504895_3 Oxidoreductase FAD-binding domain K02613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 465.0
SRD3_k127_7504895_4 short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 419.0
SRD3_k127_7504895_5 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 382.0
SRD3_k127_7504895_6 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 373.0
SRD3_k127_7504895_7 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 355.0
SRD3_k127_7504895_8 phenylacetic acid K02611 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005774 308.0
SRD3_k127_7504895_9 Peptidoglycan-binding LysM - - - 0.000000000000000000000000000000000000000000000000000000007366 205.0
SRD3_k127_801031_0 F5/8 type C domain - - - 7.478e-316 996.0
SRD3_k127_801031_1 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 3.59e-247 772.0
SRD3_k127_801031_10 Aldolase K01631 - 4.1.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000001218 252.0
SRD3_k127_801031_11 2-keto-3-deoxy-galactonokinase K00883 - 2.7.1.58 0.000000000000000000000000000000000000000000000000000000000000000001205 237.0
SRD3_k127_801031_12 SOS response associated peptidase (SRAP) - - - 0.00000000000000000000000000000000000000000000000000000000000142 227.0
SRD3_k127_801031_13 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000000000004022 213.0
SRD3_k127_801031_14 aspartate racemase K01779 - 5.1.1.13 0.000000000000000000000000000000000000000000000000000000000725 211.0
SRD3_k127_801031_15 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000000000000000000000000000000005517 197.0
SRD3_k127_801031_16 - - - - 0.00000000000000000000000000000000000000000000001164 178.0
SRD3_k127_801031_17 Protein of unknown function, DUF - - - 0.00000000000000000000000000000000000000000001322 166.0
SRD3_k127_801031_18 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.000000000000000000000000000000000000001976 150.0
SRD3_k127_801031_19 Uncharacterized ACR, COG1993 - - - 0.00000000000000000000000000000003402 142.0
SRD3_k127_801031_2 transport system, permease and ATPase K02471 - - 7.222e-201 647.0
SRD3_k127_801031_20 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K02029,K10003 - - 0.00000000000000000000000953 101.0
SRD3_k127_801031_21 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.000000000000000072 84.0
SRD3_k127_801031_22 Belongs to the ompA family K03286 - - 0.0002232 53.0
SRD3_k127_801031_3 chitin deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 497.0
SRD3_k127_801031_4 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 443.0
SRD3_k127_801031_5 Urate oxidase N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008085 426.0
SRD3_k127_801031_6 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 396.0
SRD3_k127_801031_7 PFAM extracellular solute-binding protein family 3 K02030,K10001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 384.0
SRD3_k127_801031_8 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 345.0
SRD3_k127_801031_9 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 315.0
SRD3_k127_844386_0 PFAM ABC transporter related K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 395.0
SRD3_k127_844386_1 binding-protein-dependent transport systems inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005005 357.0
SRD3_k127_844386_2 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000000000000000001912 225.0
SRD3_k127_844386_3 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000008745 138.0
SRD3_k127_844386_4 - - - - 0.00000000004025 69.0
SRD3_k127_86511_0 phenylacetic acid degradation protein paaN - - - 3.327e-253 792.0
SRD3_k127_86511_1 Coenzyme A transferase K01027,K01029 - 2.8.3.5 1.069e-240 750.0
SRD3_k127_86511_10 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007471 501.0
SRD3_k127_86511_11 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 437.0
SRD3_k127_86511_12 TOBE domain K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 396.0
SRD3_k127_86511_13 ABC-type Fe3 transport system, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 379.0
SRD3_k127_86511_14 enoyl-CoA hydratase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 367.0
SRD3_k127_86511_15 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006915 378.0
SRD3_k127_86511_16 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004339 343.0
SRD3_k127_86511_17 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 319.0
SRD3_k127_86511_18 cation efflux - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 322.0
SRD3_k127_86511_19 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002107 286.0
SRD3_k127_86511_2 FAD binding domain K05712 - 1.14.13.127 2.007e-222 705.0
SRD3_k127_86511_20 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007555 274.0
SRD3_k127_86511_21 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000001233 242.0
SRD3_k127_86511_22 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000001505 181.0
SRD3_k127_86511_23 chain release factor K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.000000000000000000000000000000000000000000001014 169.0
SRD3_k127_86511_24 phenylacetic acid degradation protein K02614 - - 0.000000000000000000000000000000000000000002447 177.0
SRD3_k127_86511_25 GYD domain - - - 0.000000000000000000000000000001713 123.0
SRD3_k127_86511_26 Protein of unknown function (DUF2783) - - - 0.0000000000000004333 93.0
SRD3_k127_86511_27 Methyltransferase - - - 0.000003469 58.0
SRD3_k127_86511_3 Belongs to the UPF0061 (SELO) family - - - 1.179e-217 689.0
SRD3_k127_86511_4 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 1.71e-205 655.0
SRD3_k127_86511_5 ATP ADP translocase K03301 - - 3.879e-196 625.0
SRD3_k127_86511_6 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 585.0
SRD3_k127_86511_7 ABC-type Fe3 transport system permease component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005662 580.0
SRD3_k127_86511_8 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 GO:0003674,GO:0003824,GO:0003857,GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0008691,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 532.0
SRD3_k127_86511_9 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009885 503.0
SRD3_k127_874366_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000789 361.0
SRD3_k127_874366_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000855 320.0
SRD3_k127_874366_2 ZIP Zinc transporter K16267 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005455 250.0
SRD3_k127_874366_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000001592 234.0
SRD3_k127_874366_4 HELICc2 K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000001887 195.0
SRD3_k127_874366_5 poly(R)-hydroxyalkanoic acid synthase K03821 - - 0.000004124 58.0
SRD3_k127_956739_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.81e-314 977.0
SRD3_k127_956739_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009429 563.0
SRD3_k127_956739_10 Sigma E regulatory protein, MucB RseB K03598 - - 0.000000000000000000000000000000000000000000000000000000001152 216.0
SRD3_k127_956739_11 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 0.000000000000000000000000000000000000000000000000000000008362 216.0
SRD3_k127_956739_12 PFAM glutaredoxin 2 - - - 0.00000000000000000133 98.0
SRD3_k127_956739_13 PFAM Anti sigma-E protein RseA family protein K03597 - - 0.000000000000001341 83.0
SRD3_k127_956739_14 Domain of unknown function (DUF4845) - - - 0.000000000182 67.0
SRD3_k127_956739_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 517.0
SRD3_k127_956739_3 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004366 424.0
SRD3_k127_956739_4 L-asparaginase II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 357.0
SRD3_k127_956739_5 Peptidase S24-like K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 342.0
SRD3_k127_956739_6 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 345.0
SRD3_k127_956739_7 TIGRFAM RNA polymerase sigma factor RpoE K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 319.0
SRD3_k127_956739_8 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000002709 265.0
SRD3_k127_956739_9 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000000000004192 237.0
SRD3_k127_973349_0 dehydrogenase, E1 component K00164 - 1.2.4.2 0.0 1248.0
SRD3_k127_973349_1 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 1.628e-293 907.0
SRD3_k127_973349_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 5.399e-246 764.0
SRD3_k127_973349_3 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 2.539e-204 680.0
SRD3_k127_973349_4 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 545.0
SRD3_k127_973349_5 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 414.0
SRD3_k127_973349_6 AFG1-like ATPase K06916 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005812 243.0
SRD3_k127_973349_7 Flavinator of succinate dehydrogenase K09159 - - 0.00000000000005628 76.0